Rroxscaffold_1G00004490

Bulb-type mannose-specific lectin

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
6193429 .. 6195834
2406 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_1G00004490.1

Sequence Viewer

Length: 2406 bp
ATGGCTTCTATACTACCTTATCCTTTTTACATTCTTCTTCTTCTTCTTCTTCTACAGCTACTCCCAATTCCCGCAATTGCTCAAACTTATAAGAACATATCCTTGGGCTCATCACTCACTGCACTTGACAATAACTCTTTCTGGGCCTCACGATCGGGGGAATTCGCTTTCGGTTTCCAAGAAGTTAGTAGTAATGGCTTCTTACTAGCCATTTGGTTTAACAAAATAGCTGAAAGGACTATTGTATGGTCAGCCAATGGCAACAATCTAGTGCAAAAAGGATCGAAAGTCGTACTTAATGCAGATGGCCAGCTTTTACTCAATGATGTTGTGACAAGCACACAGATACGGCTTGCCGATTCAGCTCAGATGGGAGTAGCCTATGCAGCCATGCTCGACACAGGAAATTTCGTGTTGGCTAATCAAAATTCAATGTATTTGTGGGAGAGTTTTACTAGGCCAACAAATACACTTCTACCCACGCAGACTCTAAATCAAGGCACCATCCTCTTTGCTCCCAAAACAGCAACAAATTACTCCAAAGGAAGATTCATGTTTACACTACAAGATGATGGAAATCTCCTGCTTTACACAACACATTACCCATCGGATTCTGCTAATTTTGCTTATTGGTCAACACAAAGTATGGGGATCGGATATCAAGTCATCTTCAACCAGACTGGAGCTATTTACCTTGCTAGCAAGAACGGAAGCATACTTACTGCTGTTCTAAACAATACAGCTTCAACCATGGAGTTCTACCACAGAGTAACTCTTGACTATGATGGAGTGTTGAGGTACTATGTCTACCCTAAAAGCACCGGCACAAGTGGACACTGGATCACGGCCTGGTCCACTTTGTCCTTCATACCTTCAGACATCTGTGCGAGGATTATAGAAGATAAAGGCGGTGGTGCATGTGGTTTCAACGGCTTATGTCAACATGACCAAGGGCCAAGTTGCCACTGCCCAGATGGATACACCTTCATTGATCCTAATGATGAGCTCAGAGGATGCAAACAGACCTTCGTGCCACAAAGCTGTGATGCGGCCTCACCGGAGACTGATCTTTTCTATTTTGAAGAGATGCAAAACACAGATTGGCCTGAATCTGATTATGAGAAGTTTACGCCGGTAACTGAGGATTGGTGCAGGCAGACTTGCCTAGCTGATTGTTTCTGTGCAGTTGCTAATTTCAGAAACGGGGACTGCTGGATCAAGTCAATACCTCTTCGCAACGGAAGGATTGACCCTAGTAATGGTGCAAAAGCTCTAATCAAAATAAGGAGAGGTAATTCTACTTTGAAACCAGAACATGCACATTCAAGAAGGAAAAATCGTTCAACTCTGATCCTTGTCGGATCAGTGCTCCTGAGTAGCTCCGGGTTTCTAAACTTTCTCTTAGTACTGATAACTTATATGGTTGTTTCTGGTTTCTATTTTAAGAAAGGAAAGGTGGTTCAACCATACTCAGTCATACCAGGGATGAACCTAATATGTTTCACTTACGAGGAGCTAAATAAGGCTACGAATGGATTTAAGGAAGAACTTGGTCGTGGTGCTTTTGCAACAGTTTTTAGAGGAGATTTAGAGTCTGATAATGGGAGATCTGTTGCTGTCAAAAGATTGAACACTATGGTAAAAGAAAGTGAGTTGGAGTTCAAAGCTGAATTGAGTGCAATTGGCAGAACAAATCACAGAAACTTGGTACAGCTAATAGGATTCTGCAACGAGGGGGAGCACCGAATTCTTGTCTATGAGTTCATGAGCAACGGCTCTCTATCAAGCTTCCTATTTGGAGAGTCAAGGCCGAGCTGGCACCAAAGAAGGCAAATTGCCTTGGGTACAGCAAGAGGGCTCTTGTATTTGCATGAGGAGTGCAGCAGCCAAATCATACATTGTGACATTAAGCCTCAAAATGTTCTCCTAGATGACTCTTTCACAGCAAGGATTTCTGATTTTGGATTAGCCAAGCTTTTGAAGACGGACCAGACTCGAACTACTACTGGAATCAGGGGAACTAAAGGGTATGTGGCTCCTGAATGGTTCAAAAATATGCCCATCACAACTAAGGTTGATGTTTACAGCTATGGCATTTTGTTACTAGAGATTATTTGCTTGAGGAAGTATTTTGAAGGAGAGGCAGAGGATGAAGATCAAATGATACTAGCTGACTGGGCATATGACTGCTACGCGCAAAAGAAATTGCGTCTACTGTTTGACAATGATGATGAGGCAGTGCATGATATCAAGAATATGGAGAAGTACTTGATGATTGCATTGTGGTGCATCCAAGAGGATCCGTCACTGAGACCCACAACGAAGAAACTCACATTGATGCTTGAAGGAACTGTTGACGTCCCAATTCCACCAGATCCATCCTCATTTGCAAGTTCAATATTGTAA

Protein Analysis

801

Amino Acids

89.75

Weight (kDa)

5.81

Isoelectric Point (pI)

35.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 80 - 165 2.5e-13 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 513 - 778 2.1e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 514 - 777 2.5e-50 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000299)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43401 FvH4_3g43402 FvH4_3g43403 FvH4_3g43440 FvH4_3g43710 FvH4_3g43772
malus_domestica MD03G1021800.v1.1 MD03G1022000.v1.1 MD11G1024500.v1.1 MD11G1024700.v1.1 MD11G1025200.v1.1 MD11G1025500.v1.1 MD11G1025600.v1.1 MD11G1026200.v1.1 MD11G1026400.v1.1 MD11G1026500.v1.1 MD11G1026600.v1.1 MD11G1026800.v1.1 MD11G1027300.v1.1
prunus_persica Prupe.6G020400_v2.0.a1 Prupe.6G020500_v2.0.a1 Prupe.6G020600_v2.0.a1 Prupe.6G020700_v2.0.a1 Prupe.6G020800_v2.0.a1 Prupe.6G020900_v2.0.a1 Prupe.6G021000_v2.0.a1 Prupe.6G021500_v2.0.a1 Prupe.6G021600_v2.0.a1
pyrus_communis pycom03g01850 pycom03g01870 pycom03g01900 pycom03g01910 pycom11g01950 pycom11g01980 pycom11g01990 pycom11g02030 pycom11g02040
rosa_chinensis RchiOBHm_Chr5g0077411 RchiOBHm_Chr5g0077421 RchiOBHm_Chr5g0077571 RchiOBHm_Chr5g0077601 RchiOBHm_Chr5g0077621 RchiOBHm_Chr5g0077651 RchiOBHm_Chr5g0077661 RchiOBHm_Chr5g0077671 RchiOBHm_Chr5g0077701 RchiOBHm_Chr5g0077741 RchiOBHm_Chr5g0077791 RchiOBHm_Chr5g0077861 RchiOBHm_Chr5g0078871 RchiOBHm_Chr5g0078901 RchiOBHm_Chr5g0078941 RchiOBHm_Chr5g0079081 RchiOBHm_Chr5g0079091 RchiOBHm_Chr7g0233481
rosa_laevigata RLG00000036694 RLG00000036704 RLG00000036705 RLG00000036710 RLG00000036713 RLG00000036714 RLG00000036716 RLG00000036793 RLG00000036796 RLG00000036804 RLG00000036806
rosa_multiflora Rmu_co8130992.1_g000001 Rmu_sc0000029.1_g000037 Rmu_sc0002187.1_g000023 Rmu_sc0004168.1_g000001 Rmu_sc0004168.1_g000004 Rmu_sc0004168.1_g000018 Rmu_sc0004168.1_g000028 Rmu_sc0004168.1_g000033 Rmu_sc0004168.1_g000056 Rmu_sc0004277.1_g000009 Rmu_sc0004277.1_g000016 Rmu_sc0004277.1_g000018 Rmu_sc0004277.1_g000020 Rmu_sc0004277.1_g000084 Rmu_sc0004277.1_g000087 Rmu_sc0012487.1_g000001 Rmu_sc0012487.1_g000002
rosa_roxburghii Rroxscaffold_1G00003760 Rroxscaffold_1G00003780 Rroxscaffold_1G00004370 Rroxscaffold_1G00004400 Rroxscaffold_1G00004490 Rroxscaffold_1G00004510 Rroxscaffold_3G00227260 Rroxscaffold_5G00366480
rosa_rugosa Rorug05G0454800 Rorug05G0455700 Rorug05G0455900 Rorug05G0456100 Rorug05G0456300 Rorug05G0456700.1 Rorug05G0461800 Rorug05G0462100 Rorug07G0280900.1 Rorug07G0281000
rosa_samantha Rh5CG562200 Rh5DG543500 Rh5DG544200 Rh5DG544400 Rh5DG544500 Rh5DG544600 Rh5DG544700 Rh5DG544900 Rh5DG545200 Rh5DG549700 Rh7DG426000
rosa_wichuraiana Rw0G003130 Rw0G023780 Rw0G023790 Rw5G046780 Rw5G047330 Rw5G047350 Rw5G047370 Rw5G047390 Rw5G047420 Rw7G036050

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 90
AatII GACGTC 1 cut(s) 2361
AccB1I GGYRCC 2 cut(s) 500, 1818
AccI GTMKAC 2 cut(s) 807, 2212
AccII CGCG 1 cut(s) 2195
AciI CCGC 3 cut(s) 72, 909, 1049
AcoI YGGCCR 1 cut(s) 307
AcsI RAATTY 4 cut(s) 161, 406, 427, 1746
AcuI CTGAAG 1 cut(s) 858
AcyI GRCGYC 1 cut(s) 2358
AfaI GTAC 6 cut(s) 294, 800, 1407, 1710, 1846, 2267
AfiI CCNNNNNNNGG 1 cut(s) 1259
AjnI CCWGG 2 cut(s) 848, 1480
AjuI GAANNNNNNNTTGG 4 cut(s) 86, 118, 533, 565
AloI GAACNNNNNNTCC 4 cut(s) 1324, 1356, 1443, 1475
Alw21I GWGCWC 3 cut(s) 1008, 1371, 1743
Alw26I GTCTC 2 cut(s) 1055, 2305
AoxI GGCC 8 cut(s) 144, 307, 458, 846, 953, 1050, 1103, 1808
ApeKI GCWGC 3 cut(s) 386, 1881, 1884
ApoI RAATTY 4 cut(s) 161, 406, 427, 1746
AspLEI GCGC 1 cut(s) 2197
AspS9I GGNCC 4 cut(s) 144, 852, 953, 1987
AsuC2I CCSGG 1 cut(s) 1384
AsuHPI GGTGA 1 cut(s) 1047
AsuNHI GCTAGC 1 cut(s) 698
AvaII GGWCC 2 cut(s) 852, 1987
BalI TGGCCA 1 cut(s) 309
BamHI GGATCC 1 cut(s) 2299
BanI GGYRCC 2 cut(s) 500, 1818
BanII GRGCYC 3 cut(s) 110, 1008, 1860
BarI GAAGNNNNNNTAC 2 cut(s) 703, 735
BbsI GAAGAC 1 cut(s) 1988
Bbv12I GWGCWC 3 cut(s) 1008, 1371, 1743
BbvI GCAGC 3 cut(s) 398, 1893, 1896
BccI CCATC 9 cut(s) 299, 364, 512, 566, 613, 779, 968, 2069, 2386
BceAI ACGGC 4 cut(s) 365, 861, 946, 1789
BciT130I CCWGG 2 cut(s) 850, 1482
BciVI GTATCC 1 cut(s) 971
BcnI CCSGG 1 cut(s) 1384
BcoDI GTCTC 2 cut(s) 1055, 2305
BfaI CTAG 9 cut(s) 206, 269, 456, 699, 1166, 1254, 1928, 2105, 2168
BfmI CTRYAG 1 cut(s) 53
BfuI GTATCC 1 cut(s) 971
BglI GCCNNNNNGGC 1 cut(s) 1816
BglII AGATCT 1 cut(s) 1607
BisI GCNGC 4 cut(s) 387, 1050, 1882, 1885
BlsI GCNGC 4 cut(s) 388, 1051, 1883, 1886
BmcAI AGTACT 2 cut(s) 1407, 2267
Bme1390I CCNGG 3 cut(s) 850, 1384, 1482
Bme18I GGWCC 2 cut(s) 852, 1987
BmgT120I GGNCC 4 cut(s) 144, 852, 953, 1987
BmiI GGNNCC 4 cut(s) 502, 1820, 2037, 2301
BmrFI CCNGG 3 cut(s) 850, 1384, 1482
BmrI ACTGGG 1 cut(s) 2185
BmsI GCATC 5 cut(s) 1004, 1036, 1077, 2298, 2328
BmtI GCTAGC 1 cut(s) 702
BmuI ACTGGG 1 cut(s) 2185
BpiI GAAGAC 1 cut(s) 1988
BpmI CTGGAG 1 cut(s) 702
BpuEI CTTGAG 1 cut(s) 2140
BpuMI CCSGG 1 cut(s) 1384
BsaBI GATNNNNATC 2 cut(s) 576, 2154
BsaHI GRCGYC 1 cut(s) 2358
BsaI GGTCTC 1 cut(s) 2305
BsaJI CCNNGG 5 cut(s) 102, 750, 949, 1481, 1839
BsaWI WCCGGW 1 cut(s) 1057
BsaXI ACNNNNNCTCC 2 cut(s) 45, 75
Bsc4I CCNNNNNNNGG 1 cut(s) 1259
Bse118I RCCGGY 2 cut(s) 821, 1132
Bse1I ACTGG 4 cut(s) 685, 842, 2011, 2180
Bse8I GATNNNNATC 2 cut(s) 576, 2154
BseBI CCWGG 2 cut(s) 850, 1482
BseDI CCNNGG 5 cut(s) 102, 750, 949, 1481, 1839
BseGI GGATG 6 cut(s) 504, 1019, 1491, 2155, 2289, 2378
BseJI GATNNNNATC 2 cut(s) 576, 2154
BseLI CCNNNNNNNGG 1 cut(s) 1259
BseMII CTCAG 6 cut(s) 380, 1021, 1131, 1364, 1485, 2300
BseNI ACTGG 4 cut(s) 685, 842, 2011, 2180
BseRI GAGGAG 3 cut(s) 1526, 1596, 1889
BseXI GCAGC 3 cut(s) 398, 1893, 1896
BsgI GTGCAG 4 cut(s) 105, 1171, 1203, 1900
Bsh1236I CGCG 1 cut(s) 2195
Bsh1285I CGRYCG 1 cut(s) 155
BshFI GGCC 8 cut(s) 146, 309, 460, 848, 955, 1052, 1105, 1810
BshNI GGYRCC 2 cut(s) 500, 1818
BsiEI CGRYCG 1 cut(s) 155
BsiHKAI GWGCWC 3 cut(s) 1008, 1371, 1743
BsiSI CCGG 4 cut(s) 822, 1058, 1133, 1383
BslFI GGGAC 2 cut(s) 1220, 2345
BslI CCNNNNNNNGG 1 cut(s) 1259
BsmAI GTCTC 2 cut(s) 1055, 2305
BsmFI GGGAC 2 cut(s) 1220, 2345
BsnI GGCC 8 cut(s) 146, 309, 460, 848, 955, 1052, 1105, 1810
Bso31I GGTCTC 1 cut(s) 2305
Bsp1286I GDGCHC 5 cut(s) 110, 1008, 1371, 1743, 1860
Bsp19I CCATGG 1 cut(s) 750
BspACI CCGC 3 cut(s) 72, 909, 1049
BspANI GGCC 8 cut(s) 146, 309, 460, 848, 955, 1052, 1105, 1810
BspCNI CTCAG 6 cut(s) 379, 1020, 1132, 1365, 1484, 2301
BspFNI CGCG 1 cut(s) 2195
BspHI TCATGA 1 cut(s) 1764
BspLI GGNNCC 4 cut(s) 502, 1820, 2037, 2301
BspOI GCTAGC 1 cut(s) 702
BspT107I GGYRCC 2 cut(s) 500, 1818
BspTNI GGTCTC 1 cut(s) 2305
BsrFI RCCGGY 2 cut(s) 821, 1132
BsrI ACTGG 4 cut(s) 685, 842, 2011, 2180
BssAI RCCGGY 2 cut(s) 821, 1132
BssECI CCNNGG 5 cut(s) 102, 750, 949, 1481, 1839
BssNI GRCGYC 1 cut(s) 2358
BssT1I CCWWGG 4 cut(s) 102, 750, 949, 1839
Bst2UI CCWGG 2 cut(s) 850, 1482
Bst4CI ACNGT 3 cut(s) 1573, 2217, 2353
Bst6I CTCTTC 2 cut(s) 1077, 1236
BstACI GRCGYC 1 cut(s) 2358
BstC8I GCNNGC 5 cut(s) 311, 354, 700, 1154, 1817
BstDEI CTNAG 8 cut(s) 366, 1007, 1140, 1373, 1402, 1471, 2070, 2309
BstDSI CCRYGG 1 cut(s) 750
BstF5I GGATG 6 cut(s) 504, 1019, 1491, 2155, 2289, 2378
BstFNI CGCG 1 cut(s) 2195
BstHHI GCGC 1 cut(s) 2197
BstMAI GTCTC 2 cut(s) 1055, 2305
BstMCI CGRYCG 1 cut(s) 155
BstMWI GCNNNNNNNGC 5 cut(s) 362, 386, 623, 1816, 2177
BstNI CCWGG 2 cut(s) 850, 1482
BstNSI RCATGY 2 cut(s) 921, 1319
BstSCI CCNGG 3 cut(s) 848, 1382, 1480
BstSFI CTRYAG 1 cut(s) 53
BstUI CGCG 1 cut(s) 2195
BstV1I GCAGC 3 cut(s) 398, 1893, 1896
BstV2I GAAGAC 1 cut(s) 1988
BstX2I RGATCY 3 cut(s) 1607, 2299, 2374
BstYI RGATCY 3 cut(s) 1607, 2299, 2374
BsuI GTATCC 1 cut(s) 971
BsuRI GGCC 8 cut(s) 146, 309, 460, 848, 955, 1052, 1105, 1810
BtgI CCRYGG 1 cut(s) 750
BtsCI GGATG 6 cut(s) 504, 1019, 1491, 2155, 2289, 2378
BtsI GCAGTG 3 cut(s) 117, 964, 2244
BtsIMutI CAGTG 6 cut(s) 117, 835, 964, 1371, 2244, 2306
Cac8I GCNNGC 5 cut(s) 311, 354, 700, 1154, 1817
CciI TCATGA 1 cut(s) 1764
CfoI GCGC 1 cut(s) 2197
Cfr10I RCCGGY 2 cut(s) 821, 1132
Cfr13I GGNCC 4 cut(s) 144, 852, 953, 1987
CseI GACGC 1 cut(s) 2198
Csp6I GTAC 6 cut(s) 293, 799, 1406, 1709, 1845, 2266
CviAII CATG 9 cut(s) 391, 553, 751, 918, 944, 1316, 1765, 1871, 2243
CviQI GTAC 6 cut(s) 293, 799, 1406, 1709, 1845, 2266
DdeI CTNAG 8 cut(s) 366, 1007, 1140, 1373, 1402, 1471, 2070, 2309
EaeI YGGCCR 1 cut(s) 307
Eam1104I CTCTTC 2 cut(s) 1077, 1236
EarI CTCTTC 2 cut(s) 1077, 1236
Ecl136II GAGCTC 1 cut(s) 1006
Eco130I CCWWGG 4 cut(s) 102, 750, 949, 1839
Eco24I GRGCYC 3 cut(s) 110, 1008, 1860
Eco31I GGTCTC 1 cut(s) 2305
Eco32I GATATC 2 cut(s) 659, 2248
Eco47I GGWCC 2 cut(s) 852, 1987
Eco53kI GAGCTC 1 cut(s) 1006
Eco57I CTGAAG 1 cut(s) 858
EcoICRI GAGCTC 1 cut(s) 1006
EcoRI GAATTC 2 cut(s) 161, 1746
EcoRII CCWGG 2 cut(s) 848, 1480
EcoRV GATATC 2 cut(s) 659, 2248
EcoT14I CCWWGG 4 cut(s) 102, 750, 949, 1839
EcoT38I GRGCYC 3 cut(s) 110, 1008, 1860
ErhI CCWWGG 4 cut(s) 102, 750, 949, 1839
FaeI CATG 9 cut(s) 394, 556, 754, 921, 947, 1319, 1768, 1874, 2246
FalI AAGNNNNNCTT 2 cut(s) 279, 311
FaqI GGGAC 2 cut(s) 1220, 2345
FatI CATG 9 cut(s) 390, 552, 750, 917, 943, 1315, 1764, 1870, 2242
FauI CCCGC 1 cut(s) 79
FauNDI CATATG 1 cut(s) 2182
FblI GTMKAC 2 cut(s) 807, 2212
Fnu4HI GCNGC 4 cut(s) 387, 1050, 1882, 1885
FokI GGATG 6 cut(s) 491, 1026, 1498, 2162, 2276, 2365
FriOI GRGCYC 3 cut(s) 110, 1008, 1860
Fsp4HI GCNGC 4 cut(s) 387, 1050, 1882, 1885
FspBI CTAG 9 cut(s) 206, 269, 456, 699, 1166, 1254, 1928, 2105, 2168
GlaI GCGC 1 cut(s) 2196
GluI GCNGC 4 cut(s) 387, 1050, 1882, 1885
GsuI CTGGAG 1 cut(s) 702
HaeIII GGCC 8 cut(s) 146, 309, 460, 848, 955, 1052, 1105, 1810
HapII CCGG 4 cut(s) 822, 1058, 1133, 1383
HgaI GACGC 1 cut(s) 2198
HhaI GCGC 1 cut(s) 2197
Hin1I GRCGYC 1 cut(s) 2358
Hin1II CATG 9 cut(s) 394, 556, 754, 921, 947, 1319, 1768, 1874, 2246
Hin6I GCGC 1 cut(s) 2195
HinP1I GCGC 1 cut(s) 2195
HincII GTYRAC 3 cut(s) 636, 941, 2356
HindII GTYRAC 3 cut(s) 636, 941, 2356
HindIII AAGCTT 2 cut(s) 1786, 1973
HpaII CCGG 4 cut(s) 822, 1058, 1133, 1383
HphI GGTGA 1 cut(s) 1047
Hpy188III TCNNGA 7 cut(s) 150, 776, 1326, 1372, 1765, 2039, 2251
HpyAV CCTTC 9 cut(s) 874, 882, 994, 1036, 1236, 1323, 1821, 2129, 2339
HpyCH4III ACNGT 3 cut(s) 1573, 2217, 2353
HpyCH4IV ACGT 1 cut(s) 2358
HpyF10VI GCNNNNNNNGC 5 cut(s) 362, 386, 623, 1816, 2177
HpyF3I CTNAG 8 cut(s) 366, 1007, 1140, 1373, 1402, 1471, 2070, 2309
HpySE526I ACGT 1 cut(s) 2358
Hsp92I GRCGYC 1 cut(s) 2358
Hsp92II CATG 9 cut(s) 394, 556, 754, 921, 947, 1319, 1768, 1874, 2246
HspAI GCGC 1 cut(s) 2195
LmnI GCTCC 7 cut(s) 520, 683, 1374, 1385, 1513, 1738, 2041
Lsp1109I GCAGC 3 cut(s) 398, 1893, 1896
LweI GCATC 5 cut(s) 1004, 1036, 1077, 2298, 2328
MaeI CTAG 9 cut(s) 206, 269, 456, 699, 1166, 1254, 1928, 2105, 2168
MaeII ACGT 1 cut(s) 2358
MaeIII GTNAC 6 cut(s) 331, 769, 1135, 1901, 2100, 2304
MfeI CAATTG 2 cut(s) 75, 1680
MflI RGATCY 3 cut(s) 1607, 2299, 2374
MhlI GDGCHC 5 cut(s) 110, 1008, 1371, 1743, 1860
MlsI TGGCCA 1 cut(s) 309
MluNI TGGCCA 1 cut(s) 309
MlyI GAGTC 5 cut(s) 481, 1601, 1811, 1928, 1987
MmeI TCCRAC 2 cut(s) 1339, 1635
Mox20I TGGCCA 1 cut(s) 309
MscI TGGCCA 1 cut(s) 309
MseI TTAA 5 cut(s) 219, 297, 1443, 1539, 1908
MslI CAYNNNNRTG 2 cut(s) 2284, 2336
Msp20I TGGCCA 1 cut(s) 309
MspI CCGG 4 cut(s) 822, 1058, 1133, 1383
MspR9I CCNGG 3 cut(s) 850, 1384, 1482
MunI CAATTG 2 cut(s) 75, 1680
MvaI CCWGG 2 cut(s) 850, 1482
MvnI CGCG 1 cut(s) 2195
MwoI GCNNNNNNNGC 5 cut(s) 362, 386, 623, 1816, 2177
NciI CCSGG 1 cut(s) 1384
NcoI CCATGG 1 cut(s) 750
NdeI CATATG 1 cut(s) 2182
NheI GCTAGC 1 cut(s) 698
NlaIII CATG 9 cut(s) 394, 556, 754, 921, 947, 1319, 1768, 1874, 2246
NlaIV GGNNCC 4 cut(s) 502, 1820, 2037, 2301
NmeAIII GCCGAG 1 cut(s) 1836
NmuCI GTSAC 3 cut(s) 331, 1901, 2304
NspI RCATGY 2 cut(s) 921, 1319
PagI TCATGA 1 cut(s) 1764
PfeI GAWTC 6 cut(s) 359, 549, 611, 1109, 1722, 2010
PkrI GCNGC 4 cut(s) 388, 1051, 1883, 1886
Ple19I CGATCG 1 cut(s) 155
PleI GAGTC 5 cut(s) 481, 1600, 1810, 1928, 1987
PpsI GAGTC 5 cut(s) 481, 1600, 1810, 1928, 1987
PsiI TTATAA 1 cut(s) 90
Psp124BI GAGCTC 1 cut(s) 1008
Psp6I CCWGG 2 cut(s) 848, 1480
PspGI CCWGG 2 cut(s) 848, 1480
PspN4I GGNNCC 4 cut(s) 502, 1820, 2037, 2301
PspPI GGNCC 4 cut(s) 144, 852, 953, 1987
PsuI RGATCY 3 cut(s) 1607, 2299, 2374
PvuI CGATCG 1 cut(s) 155
RsaI GTAC 6 cut(s) 294, 800, 1407, 1710, 1846, 2267
RsaNI GTAC 6 cut(s) 293, 799, 1406, 1709, 1845, 2266
RseI CAYNNNNRTG 2 cut(s) 2284, 2336
SacI GAGCTC 1 cut(s) 1008
SaqAI TTAA 5 cut(s) 219, 297, 1443, 1539, 1908
SatI GCNGC 4 cut(s) 387, 1050, 1882, 1885
Sau96I GGNCC 4 cut(s) 144, 852, 953, 1987
ScaI AGTACT 2 cut(s) 1407, 2267
SchI GAGTC 5 cut(s) 481, 1601, 1811, 1928, 1987
ScrFI CCNGG 3 cut(s) 850, 1384, 1482
SduI GDGCHC 5 cut(s) 110, 1008, 1371, 1743, 1860
SfaNI GCATC 5 cut(s) 1004, 1036, 1077, 2298, 2328
SfcI CTRYAG 1 cut(s) 53
SinI GGWCC 2 cut(s) 852, 1987
SmiMI CAYNNNNRTG 2 cut(s) 2284, 2336
SmlI CTYRAG 1 cut(s) 2119
SmoI CTYRAG 1 cut(s) 2119
SsiI CCGC 3 cut(s) 72, 909, 1049
SspI AATATT 1 cut(s) 2400
SspMI CTAG 9 cut(s) 206, 269, 456, 699, 1166, 1254, 1928, 2105, 2168
SstI GAGCTC 1 cut(s) 1008
StyD4I CCNGG 3 cut(s) 848, 1382, 1480
StyI CCWWGG 4 cut(s) 102, 750, 949, 1839
TaaI ACNGT 3 cut(s) 1573, 2217, 2353
TaiI ACGT 1 cut(s) 2361
TaqI TCGA 3 cut(s) 284, 396, 1996
TatI WGTACW 2 cut(s) 1405, 2265
TauI GCSGC 1 cut(s) 1052
TfiI GAWTC 6 cut(s) 359, 549, 611, 1109, 1722, 2010
Tru1I TTAA 5 cut(s) 219, 297, 1443, 1539, 1908
Tru9I TTAA 5 cut(s) 219, 297, 1443, 1539, 1908
TscAI CASTG 6 cut(s) 124, 842, 971, 1371, 2244, 2313
TseFI GTSAC 3 cut(s) 331, 1901, 2304
TseI GCWGC 3 cut(s) 386, 1881, 1884
Tsp45I GTSAC 3 cut(s) 331, 1901, 2304
TspDTI ATGAA 6 cut(s) 541, 856, 976, 1502, 1753, 2166
TspGWI ACGGA 4 cut(s) 723, 1254, 2000, 2292
TspRI CASTG 6 cut(s) 124, 842, 971, 1371, 2244, 2313
VpaK11BI GGWCC 2 cut(s) 852, 1987
XapI RAATTY 4 cut(s) 161, 406, 427, 1746
XceI RCATGY 2 cut(s) 921, 1319
XcmI CCANNNNNNNNNTGG 1 cut(s) 971
XmiI GTMKAC 2 cut(s) 807, 2212
XspI CTAG 9 cut(s) 206, 269, 456, 699, 1166, 1254, 1928, 2105, 2168
ZraI GACGTC 1 cut(s) 2359
ZrmI AGTACT 2 cut(s) 1407, 2267
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.