Rmu_sc0004277.1_g000009

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004277.1
Physical Location & Seq
Reverse (-)
16721 .. 18088
1368 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004277.1_g000009.1.cds

Sequence Viewer

Length: 1368 bp
atggctcaaacgtcgaaaaacatatccttaggctcatccctcactgcacaaaacgacgataactcctcctggccatccccatctggtgagtttgctgcttttggttttcgacagattgagaaagatggtttcttactagccatctggttcgataaaataccagagaaaacaatcgtgtggtcagccaatagggacagccttgtgccacaaggatcaaaagttgagctcaccagtggtggccgatttgtgctcaatgatgcaaagggcagtcaaatatggtctgccaattcttctagtaccggagtttcctatgcagctatgctcgacaccggaaattttgtgctggctaaccgaaactccacctacttgtgggagagttttgatcagccaactgacacaatgcttcccacacagagtctacaacaaagtggcaaactttttgctcgctacacggtgacaaattactcgacaggtagattcatgttttcactacaacctgatggaaatctcatgctttacacaacacatttccctcaagattctgccaatttcgcatattggtcagtcaaaaatactgaaattggatttcaagtcatcttcaatcagtctggccttatttatcttacatccaagaatgggaccatacttgatacaatatcaggcaagccccttgcaacgcaagatttctaccagcgggcaacactcgactatgatggagttttgaggcactatgtttaccctaaaagcagcggcacaagcggggaaaggtggcctatggcttggtctacttcctctttcataccgccaaatatctctttttcaattgtcgaaaaggtaggaatcggtgcgtgtgggttcaacagcttgtacaggattgataatacttgtgaatgtccaactggttacagtccaattgatccaaatgatgagctcaaaggatgcaaacaggacttcgttccacaaagctgcaacgcaccggcggatgattttgactttcaagaggtgccaaacacaaattttccgggtttggattatgagcaatttcaagggatggctgaggatcggtgcagacagagttgcctagacgattgcttttgtgctgttgccatttccaatatctacagagagtgttataagaagggactcccttttgtgaatgggacgattgattctagtactcatgggacgaaagctcttgtcaaatataggaaacacaattctacttcaaaaaagaaagatgattcaactttgatcattgttggatcagtgctccttagtagcttggggattctgaacttcatacagcctgcaaaaaaatatttgtattgtgtggcaaaattaatcaatctatatatttttatatattaa

Protein Analysis

455

Amino Acids

50.6

Weight (kDa)

5.69

Isoelectric Point (pI)

40.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000299)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43401 FvH4_3g43402 FvH4_3g43403 FvH4_3g43440 FvH4_3g43710 FvH4_3g43772
malus_domestica MD03G1021800.v1.1 MD03G1022000.v1.1 MD11G1024500.v1.1 MD11G1024700.v1.1 MD11G1025200.v1.1 MD11G1025500.v1.1 MD11G1025600.v1.1 MD11G1026200.v1.1 MD11G1026400.v1.1 MD11G1026500.v1.1 MD11G1026600.v1.1 MD11G1026800.v1.1 MD11G1027300.v1.1
prunus_persica Prupe.6G020400_v2.0.a1 Prupe.6G020500_v2.0.a1 Prupe.6G020600_v2.0.a1 Prupe.6G020700_v2.0.a1 Prupe.6G020800_v2.0.a1 Prupe.6G020900_v2.0.a1 Prupe.6G021000_v2.0.a1 Prupe.6G021500_v2.0.a1 Prupe.6G021600_v2.0.a1
pyrus_communis pycom03g01850 pycom03g01870 pycom03g01900 pycom03g01910 pycom11g01950 pycom11g01980 pycom11g01990 pycom11g02030 pycom11g02040
rosa_chinensis RchiOBHm_Chr5g0077411 RchiOBHm_Chr5g0077421 RchiOBHm_Chr5g0077571 RchiOBHm_Chr5g0077601 RchiOBHm_Chr5g0077621 RchiOBHm_Chr5g0077651 RchiOBHm_Chr5g0077661 RchiOBHm_Chr5g0077671 RchiOBHm_Chr5g0077701 RchiOBHm_Chr5g0077741 RchiOBHm_Chr5g0077791 RchiOBHm_Chr5g0077861 RchiOBHm_Chr5g0078871 RchiOBHm_Chr5g0078901 RchiOBHm_Chr5g0078941 RchiOBHm_Chr5g0079081 RchiOBHm_Chr5g0079091 RchiOBHm_Chr7g0233481
rosa_laevigata RLG00000036694 RLG00000036704 RLG00000036705 RLG00000036710 RLG00000036713 RLG00000036714 RLG00000036716 RLG00000036793 RLG00000036796 RLG00000036804 RLG00000036806
rosa_multiflora Rmu_co8130992.1_g000001 Rmu_sc0000029.1_g000037 Rmu_sc0002187.1_g000023 Rmu_sc0004168.1_g000001 Rmu_sc0004168.1_g000004 Rmu_sc0004168.1_g000018 Rmu_sc0004168.1_g000028 Rmu_sc0004168.1_g000033 Rmu_sc0004168.1_g000056 Rmu_sc0004277.1_g000009 Rmu_sc0004277.1_g000016 Rmu_sc0004277.1_g000018 Rmu_sc0004277.1_g000020 Rmu_sc0004277.1_g000084 Rmu_sc0004277.1_g000087 Rmu_sc0012487.1_g000001 Rmu_sc0012487.1_g000002
rosa_roxburghii Rroxscaffold_1G00003760 Rroxscaffold_1G00003780 Rroxscaffold_1G00004370 Rroxscaffold_1G00004400 Rroxscaffold_1G00004490 Rroxscaffold_1G00004510 Rroxscaffold_3G00227260 Rroxscaffold_5G00366480
rosa_rugosa Rorug05G0454800 Rorug05G0455700 Rorug05G0455900 Rorug05G0456100 Rorug05G0456300 Rorug05G0456700.1 Rorug05G0461800 Rorug05G0462100 Rorug07G0280900.1 Rorug07G0281000
rosa_samantha Rh5CG562200 Rh5DG543500 Rh5DG544200 Rh5DG544400 Rh5DG544500 Rh5DG544600 Rh5DG544700 Rh5DG544900 Rh5DG545200 Rh5DG549700 Rh7DG426000
rosa_wichuraiana Rw0G003130 Rw0G023780 Rw0G023790 Rw5G046780 Rw5G047330 Rw5G047350 Rw5G047370 Rw5G047390 Rw5G047420 Rw7G036050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1134
AccB1I GGYRCC 1 cut(s) 1003
AccI GTMKAC 2 cut(s) 418, 785
AciI CCGC 5 cut(s) 694, 750, 759, 803, 980
AclWI GGATC 4 cut(s) 220, 911, 1068, 1270
AcoI YGGCCR 2 cut(s) 71, 238
AcsI RAATTY 2 cut(s) 334, 1015
AfaI GTAC 3 cut(s) 298, 869, 1177
AfiI CCNNNNNNNGG 2 cut(s) 369, 636
AgsI TTSAA 8 cut(s) 590, 601, 822, 859, 998, 1046, 1227, 1245
AjnI CCWGG 1 cut(s) 68
AluBI AGCT 7 cut(s) 226, 317, 864, 931, 966, 1193, 1281
AluI AGCT 7 cut(s) 226, 317, 864, 931, 966, 1193, 1281
Alw21I GWGCWC 4 cut(s) 228, 252, 933, 1272
AlwI GGATC 4 cut(s) 220, 911, 1068, 1270
AoxI GGCC 4 cut(s) 71, 238, 610, 770
ApeKI GCWGC 4 cut(s) 95, 314, 747, 966
ApoI RAATTY 2 cut(s) 334, 1015
AseI ATTAAT 1 cut(s) 1340
AspS9I GGNCC 1 cut(s) 639
AsuC2I CCSGG 1 cut(s) 1023
AsuHPI GGTGA 3 cut(s) 98, 220, 466
AvaII GGWCC 1 cut(s) 639
AxyI CCTNAGG 1 cut(s) 28
BalI TGGCCA 1 cut(s) 73
BanI GGYRCC 1 cut(s) 1003
BanII GRGCYC 2 cut(s) 228, 933
Bbv12I GWGCWC 4 cut(s) 228, 252, 933, 1272
BbvCI CCTCAGC 1 cut(s) 1056
BbvI GCAGC 4 cut(s) 82, 326, 759, 953
BccI CCATC 7 cut(s) 82, 88, 119, 149, 494, 707, 1045
BciT130I CCWGG 1 cut(s) 70
BclI TGATCA 2 cut(s) 382, 1251
BcnI CCSGG 1 cut(s) 1023
BfaI CTAG 4 cut(s) 137, 294, 1082, 1173
BfmI CTRYAG 1 cut(s) 1120
BisI GCNGC 5 cut(s) 96, 315, 748, 751, 967
BlsI GCNGC 5 cut(s) 97, 316, 749, 752, 968
BmcAI AGTACT 1 cut(s) 1177
Bme1390I CCNGG 2 cut(s) 70, 1023
Bme18I GGWCC 1 cut(s) 639
BmgT120I GGNCC 1 cut(s) 639
BmiI GGNNCC 2 cut(s) 640, 1005
BmrFI CCNGG 2 cut(s) 70, 1023
BmsI GCATC 2 cut(s) 247, 929
Bpu10I CCTNAGC 1 cut(s) 1056
BpuEI CTTGAG 1 cut(s) 519
BpuMI CCSGG 1 cut(s) 1023
BsaBI GATNNNNATC 1 cut(s) 504
BsaWI WCCGGW 2 cut(s) 299, 329
BsaXI ACNNNNNCTCC 4 cut(s) 47, 77, 341, 371
Bsc4I CCNNNNNNNGG 2 cut(s) 369, 636
Bse118I RCCGGY 1 cut(s) 976
Bse1I ACTGG 2 cut(s) 231, 904
Bse21I CCTNAGG 1 cut(s) 28
Bse8I GATNNNNATC 1 cut(s) 504
BseBI CCWGG 1 cut(s) 70
BseGI GGATG 6 cut(s) 35, 74, 626, 944, 988, 1056
BseJI GATNNNNATC 1 cut(s) 504
BseLI CCNNNNNNNGG 2 cut(s) 369, 636
BseMII CTCAG 1 cut(s) 1047
BseNI ACTGG 2 cut(s) 231, 904
BseRI GAGGAG 1 cut(s) 55
BseXI GCAGC 4 cut(s) 82, 326, 759, 953
BsgI GTGCAG 2 cut(s) 30, 1087
BshFI GGCC 4 cut(s) 73, 240, 612, 772
BshNI GGYRCC 1 cut(s) 1003
BsiHKAI GWGCWC 4 cut(s) 228, 252, 933, 1272
BsiSI CCGG 4 cut(s) 300, 330, 977, 1022
BslFI GGGAC 5 cut(s) 206, 652, 1155, 1174, 1198
BslI CCNNNNNNNGG 2 cut(s) 369, 636
BsmFI GGGAC 5 cut(s) 206, 652, 1155, 1174, 1198
BsnI GGCC 4 cut(s) 73, 240, 612, 772
Bsp1286I GDGCHC 4 cut(s) 228, 252, 933, 1272
Bsp1407I TGTACA 1 cut(s) 867
Bsp143I GATC 6 cut(s) 212, 382, 916, 1060, 1251, 1262
BspACI CCGC 5 cut(s) 694, 750, 759, 803, 980
BspANI GGCC 4 cut(s) 73, 240, 612, 772
BspCNI CTCAG 1 cut(s) 1048
BspLI GGNNCC 2 cut(s) 640, 1005
BspPI GGATC 4 cut(s) 220, 911, 1068, 1270
BspT107I GGYRCC 1 cut(s) 1003
BsrFI RCCGGY 1 cut(s) 976
BsrGI TGTACA 1 cut(s) 867
BsrI ACTGG 2 cut(s) 231, 904
BssAI RCCGGY 1 cut(s) 976
BssMI GATC 6 cut(s) 212, 382, 916, 1060, 1251, 1262
Bst2UI CCWGG 1 cut(s) 70
Bst4CI ACNGT 2 cut(s) 454, 908
BstAUI TGTACA 1 cut(s) 867
BstC8I GCNNGC 5 cut(s) 345, 445, 665, 696, 1308
BstDEI CTNAG 3 cut(s) 28, 1056, 1274
BstF5I GGATG 6 cut(s) 35, 74, 626, 944, 988, 1056
BstKTI GATC 6 cut(s) 215, 385, 919, 1063, 1254, 1265
BstMBI GATC 6 cut(s) 212, 382, 916, 1060, 1251, 1262
BstMWI GCNNNNNNNGC 2 cut(s) 551, 756
BstNI CCWGG 1 cut(s) 70
BstSCI CCNGG 2 cut(s) 68, 1021
BstSFI CTRYAG 1 cut(s) 1120
BstV1I GCAGC 4 cut(s) 82, 326, 759, 953
Bsu36I CCTNAGG 1 cut(s) 28
BsuRI GGCC 4 cut(s) 73, 240, 612, 772
BtsCI GGATG 6 cut(s) 35, 74, 626, 944, 988, 1056
BtsI GCAGTG 1 cut(s) 42
BtsIMutI CAGTG 3 cut(s) 42, 238, 1272
Cac8I GCNNGC 5 cut(s) 345, 445, 665, 696, 1308
Cfr10I RCCGGY 1 cut(s) 976
Cfr13I GGNCC 1 cut(s) 639
Csp6I GTAC 3 cut(s) 297, 868, 1176
CviAII CATG 3 cut(s) 481, 511, 1181
CviQI GTAC 3 cut(s) 297, 868, 1176
DdeI CTNAG 3 cut(s) 28, 1056, 1274
DpnI GATC 6 cut(s) 214, 384, 918, 1062, 1253, 1264
DpnII GATC 6 cut(s) 212, 382, 916, 1060, 1251, 1262
EaeI YGGCCR 2 cut(s) 71, 238
EciI GGCGGA 1 cut(s) 995
Ecl136II GAGCTC 2 cut(s) 226, 931
Eco24I GRGCYC 2 cut(s) 228, 933
Eco47I GGWCC 1 cut(s) 639
Eco53kI GAGCTC 2 cut(s) 226, 931
Eco81I CCTNAGG 1 cut(s) 28
EcoICRI GAGCTC 2 cut(s) 226, 931
EcoRII CCWGG 1 cut(s) 68
EcoT38I GRGCYC 2 cut(s) 228, 933
FaeI CATG 3 cut(s) 484, 514, 1184
FaqI GGGAC 5 cut(s) 206, 652, 1155, 1174, 1198
FatI CATG 3 cut(s) 480, 510, 1180
FauI CCCGC 2 cut(s) 687, 752
FbaI TGATCA 2 cut(s) 382, 1251
FblI GTMKAC 2 cut(s) 418, 785
Fnu4HI GCNGC 5 cut(s) 96, 315, 748, 751, 967
FokI GGATG 6 cut(s) 22, 61, 613, 951, 995, 1063
FriOI GRGCYC 2 cut(s) 228, 933
Fsp4HI GCNGC 5 cut(s) 96, 315, 748, 751, 967
FspBI CTAG 4 cut(s) 137, 294, 1082, 1173
GluI GCNGC 5 cut(s) 96, 315, 748, 751, 967
HaeIII GGCC 4 cut(s) 73, 240, 612, 772
HapII CCGG 4 cut(s) 300, 330, 977, 1022
Hin1II CATG 3 cut(s) 484, 514, 1184
HinfI GANTC 8 cut(s) 415, 477, 539, 840, 1143, 1169, 1241, 1288
HpaII CCGG 4 cut(s) 300, 330, 977, 1022
HphI GGTGA 3 cut(s) 98, 220, 466
Hpy166II GTNNAC 3 cut(s) 419, 736, 786
Hpy188I TCNGA 1 cut(s) 1293
Hpy188III TCNNGA 2 cut(s) 536, 998
Hpy8I GTNNAC 3 cut(s) 419, 736, 786
Hpy99I CGWCG 2 cut(s) 16, 59
HpyAV CCTTC 1 cut(s) 1132
HpyCH4III ACNGT 2 cut(s) 454, 908
HpyCH4IV ACGT 1 cut(s) 11
HpyCH4V TGCA 8 cut(s) 47, 260, 314, 674, 942, 969, 1068, 1310
HpyF10VI GCNNNNNNNGC 2 cut(s) 551, 756
HpyF3I CTNAG 3 cut(s) 28, 1056, 1274
HpySE526I ACGT 1 cut(s) 11
Hsp92II CATG 3 cut(s) 484, 514, 1184
Ksp22I TGATCA 2 cut(s) 382, 1251
Kzo9I GATC 6 cut(s) 212, 382, 916, 1060, 1251, 1262
LmnI GCTCC 1 cut(s) 1275
Lsp1109I GCAGC 4 cut(s) 82, 326, 759, 953
LweI GCATC 2 cut(s) 247, 929
MaeI CTAG 4 cut(s) 137, 294, 1082, 1173
MaeII ACGT 1 cut(s) 11
MaeIII GTNAC 2 cut(s) 454, 902
MalI GATC 6 cut(s) 214, 384, 918, 1062, 1253, 1264
MboI GATC 6 cut(s) 212, 382, 916, 1060, 1251, 1262
MboII GAAGA 2 cut(s) 282, 589
MfeI CAATTG 2 cut(s) 822, 912
MhlI GDGCHC 4 cut(s) 228, 252, 933, 1272
MlsI TGGCCA 1 cut(s) 73
MluNI TGGCCA 1 cut(s) 73
MlyI GAGTC 2 cut(s) 424, 1137
MmeI TCCRAC 2 cut(s) 920, 1240
MnlI CCTC 7 cut(s) 50, 76, 543, 717, 802, 994, 1051
Mox20I TGGCCA 1 cut(s) 73
MscI TGGCCA 1 cut(s) 73
MseI TTAA 2 cut(s) 1340, 1366
Msp20I TGGCCA 1 cut(s) 73
MspA1I CMGCKG 2 cut(s) 694, 750
MspI CCGG 4 cut(s) 300, 330, 977, 1022
MspR9I CCNGG 2 cut(s) 70, 1023
MunI CAATTG 2 cut(s) 822, 912
MvaI CCWGG 1 cut(s) 70
MwoI GCNNNNNNNGC 2 cut(s) 551, 756
NciI CCSGG 1 cut(s) 1023
NdeII GATC 6 cut(s) 212, 382, 916, 1060, 1251, 1262
NlaIII CATG 3 cut(s) 484, 514, 1184
NlaIV GGNNCC 2 cut(s) 640, 1005
NmuCI GTSAC 1 cut(s) 454
PfeI GAWTC 6 cut(s) 477, 539, 840, 1169, 1241, 1288
PkrI GCNGC 5 cut(s) 97, 316, 749, 752, 968
PleI GAGTC 2 cut(s) 423, 1137
PpsI GAGTC 2 cut(s) 423, 1137
PshBI ATTAAT 1 cut(s) 1340
PsiI TTATAA 1 cut(s) 1134
Psp124BI GAGCTC 2 cut(s) 228, 933
Psp6I CCWGG 1 cut(s) 68
PspGI CCWGG 1 cut(s) 68
PspN4I GGNNCC 2 cut(s) 640, 1005
PspPI GGNCC 1 cut(s) 639
RsaI GTAC 3 cut(s) 298, 869, 1177
RsaNI GTAC 3 cut(s) 297, 868, 1176
SacI GAGCTC 2 cut(s) 228, 933
SaqAI TTAA 2 cut(s) 1340, 1366
SatI GCNGC 5 cut(s) 96, 315, 748, 751, 967
Sau3AI GATC 6 cut(s) 212, 382, 916, 1060, 1251, 1262
Sau96I GGNCC 1 cut(s) 639
ScaI AGTACT 1 cut(s) 1177
SchI GAGTC 2 cut(s) 424, 1137
ScrFI CCNGG 2 cut(s) 70, 1023
SduI GDGCHC 4 cut(s) 228, 252, 933, 1272
SfaNI GCATC 2 cut(s) 247, 929
SfcI CTRYAG 1 cut(s) 1120
SgrAI CRCCGGYG 1 cut(s) 976
SinI GGWCC 1 cut(s) 639
SmlI CTYRAG 1 cut(s) 534
SmoI CTYRAG 1 cut(s) 534
SsiI CCGC 5 cut(s) 694, 750, 759, 803, 980
SspI AATATT 1 cut(s) 1319
SspMI CTAG 4 cut(s) 137, 294, 1082, 1173
SstI GAGCTC 2 cut(s) 228, 933
StyD4I CCNGG 2 cut(s) 68, 1021
TaaI ACNGT 2 cut(s) 454, 908
TaiI ACGT 1 cut(s) 14
TaqI TCGA 7 cut(s) 14, 109, 150, 324, 467, 705, 828
TatI WGTACW 2 cut(s) 867, 1175
TauI GCSGC 1 cut(s) 753
TfiI GAWTC 6 cut(s) 477, 539, 840, 1169, 1241, 1288
Tru1I TTAA 2 cut(s) 1340, 1366
Tru9I TTAA 2 cut(s) 1340, 1366
TscAI CASTG 3 cut(s) 49, 238, 1272
TseFI GTSAC 1 cut(s) 454
TseI GCWGC 4 cut(s) 95, 314, 747, 966
Tsp45I GTSAC 1 cut(s) 454
TspDTI ATGAA 3 cut(s) 469, 787, 1288
TspRI CASTG 3 cut(s) 49, 238, 1272
VpaK11BI GGWCC 1 cut(s) 639
VspI ATTAAT 1 cut(s) 1340
XapI RAATTY 2 cut(s) 334, 1015
XmiI GTMKAC 2 cut(s) 418, 785
XspI CTAG 4 cut(s) 137, 294, 1082, 1173
ZrmI AGTACT 1 cut(s) 1177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.