Rroxscaffold_1G00004510

Bulb-type mannose-specific lectin

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
6214839 .. 6217241
2403 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00004510.1

Sequence Viewer

Length: 2403 bp
ATGGCTTTTGTACTACCATATCCTTTATACCTTCTTCTTCTTCTTCTTCTTCAGCTACTCCCATTTTCTGCAATTGCTCAAACTTACAAGAACATATCCTTGGGCTCTTCCCTCACTGCACTTGACAATAACTCTTTCTGGGCTTCGCCATCTGGGGAATTCGCCTTCGGTTTCCAAGAAGTTGGCAGTAATGGCTTCTTACTTGCCATCTGGTTTAACAAAATAGCTGAAAGGACTATTGTATGGTCAGCCAATGCCAACAATCTACTGCAGAAGGGATCAAAAGTGGTACTCAATGCAGATGGCCAGCTTTTACTCAATGATGCTGCGACAAGCAAACAATTACTGCTTGCTGATTCAGCTGGGATGGAAGTAGCCTATGCAGCCATGCTCGACACAGGAAATTTTGTGTTGGCTAATCGAAATTCCAGGTATTTGTGGGAGAGTTTTACTCGGCCAACAAATACACTTCTACCCACACAGACTTTAAATCAAGGCACCATCCTCTTTGCTCCCACAACAGCAACAAATTACTCCAAAGGAAGATTCATGTTTACACTACAAGCTGATGGAAACCTCTTGCTTTACACAACACATTACCCATGGGATTCTGCTAATTTTGCTTATTGGTCATCACAAACTGAGGGGATCGGATATCAAGTCATCTTCAACCAGACTGGAGCTATTTACCTTGCTAGCAAAAACGGAAGCATACTTACTACGGTACTAAACAATACAGCTTCAACGACAGGTTTCTACCACAGAACAACTCTCGACTATGATGGAGTGTTGAGGTACTATGTCTACCCTAAAAGCACTAATTCAAGTGGAATGTGGCTTAAGGCTTGGTCCACTTTGTCCATCATACCTTCAAACATCTGTGTGAACATTTCACAAGATAAAGGCGGTGGTGCATGTGGTTTCAACGGCTTATGTCAACATGACCAAGGGCCAAGTTGCCAGTGCCCAGTTGGTTATAGCTTCATTGATCCTAATGATGAGCTCAGAGGATGCAAGCAGAACTTCGTGCAACAAAGCTGTGATGGGGCCTCACCAGAGACTGATCTTTTCTATTTCGAAGAGATGCAAAACACAGCTTGGCCTCAATCGGATTATGAGAAGTTTACACCGGTAACTGAGGATTGGTGCAGGCAGACTTGCCTAGCTGATTGTTTCTGTGCAGTAGCTAATTTCAGAAACGGGGACTGCTGGATCAAGTCAATACCTCTTCGCAACGGAAGGATTGACCCCAGTAATGGTGCAAAAGCTCTAATCAAAATAAGGAGAGGTAATTCTACTTTGAAACCAGAACATGCACATTCAAGAAGGAAAAATCGTTCAACTCTGATCCTTGTCGGATCAGTGCTCCTGAGTAGCTCCGGGTTTCTAAACTTTCTCTTAGTACTGATAACTTATATGGTTGTTTCTGGTTTCTATTTTAAGAAAGGAAAGGTGGTTCAACCATACTCAGTCATACCAGGGATGAACCTAATATGTTTCACTTACGAGGAGCTAAATAAGGCTACGAATGGATTTAAGGAAGAACTTGGTCGTGGTGCTTTTGCAACAGTTTTTAGAGGAGATTTAGAGTCTGATAATGGGAGATCTGTTGCTGTCAAAAGATTGAACACTATGGTAAAAGAAAGTGAGTTGGAGTTCAAAGCTGAATTGAGTGCAATTGGCAGAACAAATCACAGAAACTTGGTACAGCTAATAGGATTCTGCAACGAGGGGGAGCACCGAATTCTTGTCTATGAGTTCATGAGCAACGGCTCTCTATCAAGCTTCTTATTTGGAGAGTCAAGGCCGAGCTGGCACCAAAGAAGGCAAATTGCCTTGGGTACAGCAAGAGGGCTCTTGTATTTGCATGAGGAGTGCAGCAGCCAAATCATACATTGTGACATTAAGCCTCAAAATGTTCTCCTAGATGACTCTTTCACAGCAAGGATTTCTGACTTTGGATTAGCCAAGCTTTTGAAGACGGACCAGACTCGAACTACTACTGGAATCAGGGGAACTAAAGGGTATGTGGCTCCTGAATGGTTCAAAAATATGCCTATCACAACTAAGGTTGATGTTTACAGCTACGGGATTTTGTTACTTGAGATCATTTGCTTGAGGAAGTATTTTGAGGCAGAGGCAGAGGATGAAGATCAAATGATACTAGCTGACTGGGCATATGACTGCTATGTGGAAAAGAAACTGCATCTGCTATTTGACAGTGATGATGAGGCACTGCATGATATCAAGAATATGGAGAAGTACTTGATGATCGCATTCTGGTGCATCCAGGAGGATCCGTCACTGAGACCCACAACAAAGAAACTCACATTGATGCTGGAAGGAACTGTCGAAGTCTCAATTCCACCAGATCCATCCTCATTTACAAGTTCAGTATTGTAA

Protein Analysis

800

Amino Acids

89.55

Weight (kDa)

6.03

Isoelectric Point (pI)

34.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 79 - 164 1e-13 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 512 - 777 6e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 513 - 776 4.3e-50 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000299)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43401 FvH4_3g43402 FvH4_3g43403 FvH4_3g43440 FvH4_3g43710 FvH4_3g43772
malus_domestica MD03G1021800.v1.1 MD03G1022000.v1.1 MD11G1024500.v1.1 MD11G1024700.v1.1 MD11G1025200.v1.1 MD11G1025500.v1.1 MD11G1025600.v1.1 MD11G1026200.v1.1 MD11G1026400.v1.1 MD11G1026500.v1.1 MD11G1026600.v1.1 MD11G1026800.v1.1 MD11G1027300.v1.1
prunus_persica Prupe.6G020400_v2.0.a1 Prupe.6G020500_v2.0.a1 Prupe.6G020600_v2.0.a1 Prupe.6G020700_v2.0.a1 Prupe.6G020800_v2.0.a1 Prupe.6G020900_v2.0.a1 Prupe.6G021000_v2.0.a1 Prupe.6G021500_v2.0.a1 Prupe.6G021600_v2.0.a1
pyrus_communis pycom03g01850 pycom03g01870 pycom03g01900 pycom03g01910 pycom11g01950 pycom11g01980 pycom11g01990 pycom11g02030 pycom11g02040
rosa_chinensis RchiOBHm_Chr5g0077411 RchiOBHm_Chr5g0077421 RchiOBHm_Chr5g0077571 RchiOBHm_Chr5g0077601 RchiOBHm_Chr5g0077621 RchiOBHm_Chr5g0077651 RchiOBHm_Chr5g0077661 RchiOBHm_Chr5g0077671 RchiOBHm_Chr5g0077701 RchiOBHm_Chr5g0077741 RchiOBHm_Chr5g0077791 RchiOBHm_Chr5g0077861 RchiOBHm_Chr5g0078871 RchiOBHm_Chr5g0078901 RchiOBHm_Chr5g0078941 RchiOBHm_Chr5g0079081 RchiOBHm_Chr5g0079091 RchiOBHm_Chr7g0233481
rosa_laevigata RLG00000036694 RLG00000036704 RLG00000036705 RLG00000036710 RLG00000036713 RLG00000036714 RLG00000036716 RLG00000036793 RLG00000036796 RLG00000036804 RLG00000036806
rosa_multiflora Rmu_co8130992.1_g000001 Rmu_sc0000029.1_g000037 Rmu_sc0002187.1_g000023 Rmu_sc0004168.1_g000001 Rmu_sc0004168.1_g000004 Rmu_sc0004168.1_g000018 Rmu_sc0004168.1_g000028 Rmu_sc0004168.1_g000033 Rmu_sc0004168.1_g000056 Rmu_sc0004277.1_g000009 Rmu_sc0004277.1_g000016 Rmu_sc0004277.1_g000018 Rmu_sc0004277.1_g000020 Rmu_sc0004277.1_g000084 Rmu_sc0004277.1_g000087 Rmu_sc0012487.1_g000001 Rmu_sc0012487.1_g000002
rosa_roxburghii Rroxscaffold_1G00003760 Rroxscaffold_1G00003780 Rroxscaffold_1G00004370 Rroxscaffold_1G00004400 Rroxscaffold_1G00004490 Rroxscaffold_1G00004510 Rroxscaffold_3G00227260 Rroxscaffold_5G00366480
rosa_rugosa Rorug05G0454800 Rorug05G0455700 Rorug05G0455900 Rorug05G0456100 Rorug05G0456300 Rorug05G0456700.1 Rorug05G0461800 Rorug05G0462100 Rorug07G0280900.1 Rorug07G0281000
rosa_samantha Rh5CG562200 Rh5DG543500 Rh5DG544200 Rh5DG544400 Rh5DG544500 Rh5DG544600 Rh5DG544700 Rh5DG544900 Rh5DG545200 Rh5DG549700 Rh7DG426000
rosa_wichuraiana Rw0G003130 Rw0G023780 Rw0G023790 Rw5G046780 Rw5G047330 Rw5G047350 Rw5G047370 Rw5G047390 Rw5G047420 Rw7G036050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 497, 1815
AccI GTMKAC 1 cut(s) 804
AciI CCGC 1 cut(s) 906
AclWI GGATC 9 cut(s) 286, 656, 983, 1220, 1342, 1366, 2291, 2304, 2366
AcoI YGGCCR 2 cut(s) 304, 455
AcsI RAATTY 4 cut(s) 158, 403, 424, 1743
AcuI CTGAAG 1 cut(s) 35
AfaI GTAC 8 cut(s) 12, 291, 726, 797, 1404, 1707, 1843, 2264
AfiI CCNNNNNNNGG 1 cut(s) 1256
AflII CTTAAG 1 cut(s) 839
AgeI ACCGGT 1 cut(s) 1129
AjnI CCWGG 3 cut(s) 428, 1477, 2289
AjuI GAANNNNNNNTTGG 4 cut(s) 83, 115, 530, 562
AloI GAACNNNNNNTCC 4 cut(s) 1321, 1353, 1440, 1472
Alw21I GWGCWC 3 cut(s) 1005, 1368, 1740
Alw26I GTCTC 3 cut(s) 1052, 2302, 2362
AlwI GGATC 9 cut(s) 286, 656, 983, 1220, 1342, 1366, 2291, 2304, 2366
AlwNI CAGNNNCTG 1 cut(s) 1061
AoxI GGCC 6 cut(s) 304, 455, 950, 1047, 1100, 1805
ApeKI GCWGC 4 cut(s) 326, 383, 1878, 1881
ApoI RAATTY 4 cut(s) 158, 403, 424, 1743
AsiGI ACCGGT 1 cut(s) 1129
AspS9I GGNCC 4 cut(s) 849, 950, 1047, 1984
AsuC2I CCSGG 1 cut(s) 1381
AsuHPI GGTGA 1 cut(s) 1044
AsuII TTCGAA 1 cut(s) 1077
AsuNHI GCTAGC 1 cut(s) 695
AvaII GGWCC 2 cut(s) 849, 1984
BaeGI GKGCMC 1 cut(s) 968
BalI TGGCCA 1 cut(s) 306
BamHI GGATCC 1 cut(s) 2296
BanI GGYRCC 2 cut(s) 497, 1815
BanII GRGCYC 3 cut(s) 107, 1005, 1857
BarI GAAGNNNNNNTAC 2 cut(s) 700, 732
BbsI GAAGAC 1 cut(s) 1985
Bbv12I GWGCWC 3 cut(s) 1005, 1368, 1740
BbvI GCAGC 4 cut(s) 313, 395, 1890, 1893
BceAI ACGGC 2 cut(s) 943, 1786
BciT130I CCWGG 3 cut(s) 430, 1479, 2291
BcnI CCSGG 1 cut(s) 1381
BcoDI GTCTC 3 cut(s) 1052, 2302, 2362
BfaI CTAG 4 cut(s) 696, 1163, 1925, 2165
BfmI CTRYAG 1 cut(s) 269
BfrI CTTAAG 1 cut(s) 839
BglI GCCNNNNNGGC 1 cut(s) 1813
BglII AGATCT 1 cut(s) 1604
BisI GCNGC 4 cut(s) 327, 384, 1879, 1882
BlsI GCNGC 4 cut(s) 328, 385, 1880, 1883
BmcAI AGTACT 2 cut(s) 1404, 2264
Bme1390I CCNGG 4 cut(s) 430, 1381, 1479, 2291
Bme18I GGWCC 2 cut(s) 849, 1984
BmgT120I GGNCC 4 cut(s) 849, 950, 1047, 1984
BmiI GGNNCC 5 cut(s) 499, 1048, 1817, 2034, 2298
BmrFI CCNGG 4 cut(s) 430, 1381, 1479, 2291
BmrI ACTGGG 3 cut(s) 962, 1245, 2182
BmsI GCATC 6 cut(s) 313, 1001, 1074, 2215, 2295, 2325
BmtI GCTAGC 1 cut(s) 699
BmuI ACTGGG 3 cut(s) 962, 1245, 2182
BpiI GAAGAC 1 cut(s) 1985
BplI GAGNNNNNCTC 2 cut(s) 436, 468
BpmI CTGGAG 1 cut(s) 699
Bpu14I TTCGAA 1 cut(s) 1077
BpuEI CTTGAG 2 cut(s) 2123, 2137
BpuMI CCSGG 1 cut(s) 1381
BsaBI GATNNNNATC 1 cut(s) 2151
BsaI GGTCTC 1 cut(s) 2302
BsaJI CCNNGG 5 cut(s) 99, 602, 946, 1478, 1836
BsaWI WCCGGW 1 cut(s) 1129
BsaXI ACNNNNNCTCC 2 cut(s) 2285, 2315
Bsc4I CCNNNNNNNGG 1 cut(s) 1256
Bse118I RCCGGY 1 cut(s) 1129
Bse1I ACTGG 6 cut(s) 682, 961, 968, 1251, 2008, 2177
Bse8I GATNNNNATC 1 cut(s) 2151
BseBI CCWGG 3 cut(s) 430, 1479, 2291
BseDI CCNNGG 5 cut(s) 99, 602, 946, 1478, 1836
BseGI GGATG 7 cut(s) 372, 501, 1016, 1488, 2152, 2286, 2375
BseJI GATNNNNATC 1 cut(s) 2151
BseLI CCNNNNNNNGG 1 cut(s) 1256
BseMII CTCAG 6 cut(s) 633, 1018, 1128, 1361, 1482, 2297
BseNI ACTGG 6 cut(s) 682, 961, 968, 1251, 2008, 2177
BseRI GAGGAG 3 cut(s) 1523, 1593, 1886
BseSI GKGCMC 1 cut(s) 968
BseXI GCAGC 4 cut(s) 313, 395, 1890, 1893
BseYI CCCAGC 1 cut(s) 362
BsgI GTGCAG 4 cut(s) 102, 1168, 1200, 1897
BshFI GGCC 6 cut(s) 306, 457, 952, 1049, 1102, 1807
BshNI GGYRCC 2 cut(s) 497, 1815
BshTI ACCGGT 1 cut(s) 1129
BsiHKAI GWGCWC 3 cut(s) 1005, 1368, 1740
BsiSI CCGG 2 cut(s) 1130, 1380
BslFI GGGAC 1 cut(s) 1217
BslI CCNNNNNNNGG 1 cut(s) 1256
BsmAI GTCTC 3 cut(s) 1052, 2302, 2362
BsmFI GGGAC 1 cut(s) 1217
BsmI GAATGC 1 cut(s) 2276
BsnI GGCC 6 cut(s) 306, 457, 952, 1049, 1102, 1807
Bso31I GGTCTC 1 cut(s) 2302
Bsp119I TTCGAA 1 cut(s) 1077
Bsp1286I GDGCHC 6 cut(s) 107, 968, 1005, 1368, 1740, 1857
Bsp19I CCATGG 1 cut(s) 602
BspACI CCGC 1 cut(s) 906
BspANI GGCC 6 cut(s) 306, 457, 952, 1049, 1102, 1807
BspCNI CTCAG 6 cut(s) 634, 1017, 1129, 1362, 1481, 2298
BspHI TCATGA 1 cut(s) 1761
BspLI GGNNCC 5 cut(s) 499, 1048, 1817, 2034, 2298
BspMAI CTGCAG 1 cut(s) 273
BspOI GCTAGC 1 cut(s) 699
BspPI GGATC 9 cut(s) 286, 656, 983, 1220, 1342, 1366, 2291, 2304, 2366
BspQI GCTCTTC 1 cut(s) 112
BspT104I TTCGAA 1 cut(s) 1077
BspT107I GGYRCC 2 cut(s) 497, 1815
BspTI CTTAAG 1 cut(s) 839
BspTNI GGTCTC 1 cut(s) 2302
BsrFI RCCGGY 1 cut(s) 1129
BsrI ACTGG 6 cut(s) 682, 961, 968, 1251, 2008, 2177
BssAI RCCGGY 1 cut(s) 1129
BssECI CCNNGG 5 cut(s) 99, 602, 946, 1478, 1836
BssT1I CCWWGG 4 cut(s) 99, 602, 946, 1836
Bst2UI CCWGG 3 cut(s) 430, 1479, 2291
Bst4CI ACNGT 4 cut(s) 724, 1570, 2222, 2350
Bst6I CTCTTC 3 cut(s) 112, 1074, 1233
BstAFI CTTAAG 1 cut(s) 839
BstBI TTCGAA 1 cut(s) 1077
BstC8I GCNNGC 6 cut(s) 308, 351, 697, 1016, 1151, 1814
BstDEI CTNAG 8 cut(s) 642, 1004, 1137, 1370, 1399, 1468, 2067, 2306
BstDSI CCRYGG 1 cut(s) 602
BstF5I GGATG 7 cut(s) 372, 501, 1016, 1488, 2152, 2286, 2375
BstMAI GTCTC 3 cut(s) 1052, 2302, 2362
BstMWI GCNNNNNNNGC 6 cut(s) 192, 359, 383, 620, 1813, 2174
BstNI CCWGG 3 cut(s) 430, 1479, 2291
BstNSI RCATGY 2 cut(s) 918, 1316
BstSCI CCNGG 4 cut(s) 428, 1379, 1477, 2289
BstSFI CTRYAG 1 cut(s) 269
BstSLI GKGCMC 1 cut(s) 968
BstV1I GCAGC 4 cut(s) 313, 395, 1890, 1893
BstV2I GAAGAC 1 cut(s) 1985
BstX2I RGATCY 3 cut(s) 1604, 2296, 2371
BstXI CCANNNNNNTGG 1 cut(s) 182
BstYI RGATCY 3 cut(s) 1604, 2296, 2371
BsuRI GGCC 6 cut(s) 306, 457, 952, 1049, 1102, 1807
BtgI CCRYGG 1 cut(s) 602
BtsCI GGATG 7 cut(s) 372, 501, 1016, 1488, 2152, 2286, 2375
BtsI GCAGTG 2 cut(s) 114, 2234
BtsIMutI CAGTG 6 cut(s) 114, 968, 1368, 2227, 2234, 2303
Cac8I GCNNGC 6 cut(s) 308, 351, 697, 1016, 1151, 1814
CaiI CAGNNNCTG 1 cut(s) 1061
CciI TCATGA 1 cut(s) 1761
Cfr10I RCCGGY 1 cut(s) 1129
Cfr13I GGNCC 4 cut(s) 849, 950, 1047, 1984
Csp6I GTAC 8 cut(s) 11, 290, 725, 796, 1403, 1706, 1842, 2263
CspAI ACCGGT 1 cut(s) 1129
CviAII CATG 9 cut(s) 388, 550, 603, 915, 941, 1313, 1762, 1868, 2240
CviQI GTAC 8 cut(s) 11, 290, 725, 796, 1403, 1706, 1842, 2263
DdeI CTNAG 8 cut(s) 642, 1004, 1137, 1370, 1399, 1468, 2067, 2306
DraI TTTAAA 1 cut(s) 489
EaeI YGGCCR 2 cut(s) 304, 455
Eam1104I CTCTTC 3 cut(s) 112, 1074, 1233
EarI CTCTTC 3 cut(s) 112, 1074, 1233
Ecl136II GAGCTC 1 cut(s) 1003
Eco130I CCWWGG 4 cut(s) 99, 602, 946, 1836
Eco24I GRGCYC 3 cut(s) 107, 1005, 1857
Eco31I GGTCTC 1 cut(s) 2302
Eco32I GATATC 2 cut(s) 656, 2245
Eco47I GGWCC 2 cut(s) 849, 1984
Eco53kI GAGCTC 1 cut(s) 1003
Eco57I CTGAAG 1 cut(s) 35
EcoICRI GAGCTC 1 cut(s) 1003
EcoO109I RGGNCCY 1 cut(s) 1047
EcoRI GAATTC 2 cut(s) 158, 1743
EcoRII CCWGG 3 cut(s) 428, 1477, 2289
EcoRV GATATC 2 cut(s) 656, 2245
EcoT14I CCWWGG 4 cut(s) 99, 602, 946, 1836
EcoT38I GRGCYC 3 cut(s) 107, 1005, 1857
ErhI CCWWGG 4 cut(s) 99, 602, 946, 1836
FaeI CATG 9 cut(s) 391, 553, 606, 918, 944, 1316, 1765, 1871, 2243
FalI AAGNNNNNCTT 2 cut(s) 1007, 1039
FaqI GGGAC 1 cut(s) 1217
FatI CATG 9 cut(s) 387, 549, 602, 914, 940, 1312, 1761, 1867, 2239
FauNDI CATATG 1 cut(s) 2179
FblI GTMKAC 1 cut(s) 804
Fnu4HI GCNGC 4 cut(s) 327, 384, 1879, 1882
FokI GGATG 7 cut(s) 379, 488, 1023, 1495, 2159, 2273, 2362
FriOI GRGCYC 3 cut(s) 107, 1005, 1857
Fsp4HI GCNGC 4 cut(s) 327, 384, 1879, 1882
FspBI CTAG 4 cut(s) 696, 1163, 1925, 2165
GluI GCNGC 4 cut(s) 327, 384, 1879, 1882
GsaI CCCAGC 1 cut(s) 366
GsuI CTGGAG 1 cut(s) 699
HaeIII GGCC 6 cut(s) 306, 457, 952, 1049, 1102, 1807
HapII CCGG 2 cut(s) 1130, 1380
Hin1II CATG 9 cut(s) 391, 553, 606, 918, 944, 1316, 1765, 1871, 2243
HincII GTYRAC 1 cut(s) 938
HindII GTYRAC 1 cut(s) 938
HindIII AAGCTT 2 cut(s) 1783, 1970
HinfI GANTC 9 cut(s) 356, 546, 608, 1589, 1719, 1799, 1931, 1990, 2007
HpaII CCGG 2 cut(s) 1130, 1380
HphI GGTGA 1 cut(s) 1044
Hpy166II GTNNAC 7 cut(s) 555, 805, 852, 886, 938, 1125, 2080
Hpy188I TCNGA 8 cut(s) 653, 1007, 1111, 1196, 1347, 1358, 1594, 1954
Hpy188III TCNNGA 6 cut(s) 773, 1323, 1369, 1762, 2036, 2248
Hpy8I GTNNAC 7 cut(s) 555, 805, 852, 886, 938, 1125, 2080
HpyAV CCTTC 8 cut(s) 41, 175, 268, 879, 1233, 1320, 1818, 2336
HpyCH4III ACNGT 4 cut(s) 724, 1570, 2222, 2350
HpyF10VI GCNNNNNNNGC 6 cut(s) 192, 359, 383, 620, 1813, 2174
HpyF3I CTNAG 8 cut(s) 642, 1004, 1137, 1370, 1399, 1468, 2067, 2306
Hsp92II CATG 9 cut(s) 391, 553, 606, 918, 944, 1316, 1765, 1871, 2243
LguI GCTCTTC 1 cut(s) 112
LmnI GCTCC 7 cut(s) 517, 680, 1371, 1382, 1510, 1735, 2038
Lsp1109I GCAGC 4 cut(s) 313, 395, 1890, 1893
LweI GCATC 6 cut(s) 313, 1001, 1074, 2215, 2295, 2325
MaeI CTAG 4 cut(s) 696, 1163, 1925, 2165
MaeIII GTNAC 4 cut(s) 1132, 1898, 2097, 2301
MfeI CAATTG 2 cut(s) 72, 1677
MflI RGATCY 3 cut(s) 1604, 2296, 2371
MhlI GDGCHC 6 cut(s) 107, 968, 1005, 1368, 1740, 1857
MlsI TGGCCA 1 cut(s) 306
MluNI TGGCCA 1 cut(s) 306
MlyI GAGTC 4 cut(s) 1598, 1808, 1925, 1984
MmeI TCCRAC 2 cut(s) 1336, 1632
Mox20I TGGCCA 1 cut(s) 306
MscI TGGCCA 1 cut(s) 306
MseI TTAA 6 cut(s) 216, 488, 840, 1440, 1536, 1905
MslI CAYNNNNRTG 3 cut(s) 881, 2281, 2333
Msp20I TGGCCA 1 cut(s) 306
MspA1I CMGCKG 1 cut(s) 362
MspCI CTTAAG 1 cut(s) 839
MspI CCGG 2 cut(s) 1130, 1380
MspR9I CCNGG 4 cut(s) 430, 1381, 1479, 2291
MunI CAATTG 2 cut(s) 72, 1677
Mva1269I GAATGC 1 cut(s) 2276
MvaI CCWGG 3 cut(s) 430, 1479, 2291
MwoI GCNNNNNNNGC 6 cut(s) 192, 359, 383, 620, 1813, 2174
NciI CCSGG 1 cut(s) 1381
NcoI CCATGG 1 cut(s) 602
NdeI CATATG 1 cut(s) 2179
NheI GCTAGC 1 cut(s) 695
NlaIII CATG 9 cut(s) 391, 553, 606, 918, 944, 1316, 1765, 1871, 2243
NlaIV GGNNCC 5 cut(s) 499, 1048, 1817, 2034, 2298
NmeAIII GCCGAG 2 cut(s) 433, 1833
NmuCI GTSAC 2 cut(s) 1898, 2301
NspI RCATGY 2 cut(s) 918, 1316
NspV TTCGAA 1 cut(s) 1077
PagI TCATGA 1 cut(s) 1761
PciSI GCTCTTC 1 cut(s) 112
PctI GAATGC 1 cut(s) 2276
PfeI GAWTC 5 cut(s) 356, 546, 608, 1719, 2007
PfoI TCCNGGA 1 cut(s) 2289
PinAI ACCGGT 1 cut(s) 1129
PkrI GCNGC 4 cut(s) 328, 385, 1880, 1883
PleI GAGTC 4 cut(s) 1597, 1807, 1925, 1984
PpsI GAGTC 4 cut(s) 1597, 1807, 1925, 1984
Psp124BI GAGCTC 1 cut(s) 1005
Psp6I CCWGG 3 cut(s) 428, 1477, 2289
PspFI CCCAGC 1 cut(s) 362
PspGI CCWGG 3 cut(s) 428, 1477, 2289
PspN4I GGNNCC 5 cut(s) 499, 1048, 1817, 2034, 2298
PspPI GGNCC 4 cut(s) 849, 950, 1047, 1984
PstI CTGCAG 1 cut(s) 273
PstNI CAGNNNCTG 1 cut(s) 1061
PsuI RGATCY 3 cut(s) 1604, 2296, 2371
PvuII CAGCTG 1 cut(s) 362
RsaI GTAC 8 cut(s) 12, 291, 726, 797, 1404, 1707, 1843, 2264
RsaNI GTAC 8 cut(s) 11, 290, 725, 796, 1403, 1706, 1842, 2263
RseI CAYNNNNRTG 3 cut(s) 881, 2281, 2333
SacI GAGCTC 1 cut(s) 1005
SapI GCTCTTC 1 cut(s) 112
SaqAI TTAA 6 cut(s) 216, 488, 840, 1440, 1536, 1905
SatI GCNGC 4 cut(s) 327, 384, 1879, 1882
Sau96I GGNCC 4 cut(s) 849, 950, 1047, 1984
ScaI AGTACT 2 cut(s) 1404, 2264
SchI GAGTC 4 cut(s) 1598, 1808, 1925, 1984
ScrFI CCNGG 4 cut(s) 430, 1381, 1479, 2291
SduI GDGCHC 6 cut(s) 107, 968, 1005, 1368, 1740, 1857
SfaNI GCATC 6 cut(s) 313, 1001, 1074, 2215, 2295, 2325
SfcI CTRYAG 1 cut(s) 269
SfuI TTCGAA 1 cut(s) 1077
SinI GGWCC 2 cut(s) 849, 1984
SmiMI CAYNNNNRTG 3 cut(s) 881, 2281, 2333
SmlI CTYRAG 3 cut(s) 839, 2102, 2116
SmoI CTYRAG 3 cut(s) 839, 2102, 2116
SsiI CCGC 1 cut(s) 906
SspMI CTAG 4 cut(s) 696, 1163, 1925, 2165
SstI GAGCTC 1 cut(s) 1005
StyD4I CCNGG 4 cut(s) 428, 1379, 1477, 2289
StyI CCWWGG 4 cut(s) 99, 602, 946, 1836
TaaI ACNGT 4 cut(s) 724, 1570, 2222, 2350
TaqI TCGA 6 cut(s) 393, 421, 774, 1077, 1993, 2352
TatI WGTACW 3 cut(s) 10, 1402, 2262
TfiI GAWTC 5 cut(s) 356, 546, 608, 1719, 2007
Tru1I TTAA 6 cut(s) 216, 488, 840, 1440, 1536, 1905
Tru9I TTAA 6 cut(s) 216, 488, 840, 1440, 1536, 1905
TscAI CASTG 6 cut(s) 121, 968, 1368, 2227, 2241, 2310
TseFI GTSAC 2 cut(s) 1898, 2301
TseI GCWGC 4 cut(s) 326, 383, 1878, 1881
Tsp45I GTSAC 2 cut(s) 1898, 2301
TspDTI ATGAA 5 cut(s) 538, 973, 1499, 1750, 2163
TspGWI ACGGA 4 cut(s) 720, 1251, 1997, 2289
TspRI CASTG 6 cut(s) 121, 968, 1368, 2227, 2241, 2310
Vha464I CTTAAG 1 cut(s) 839
VpaK11BI GGWCC 2 cut(s) 849, 1984
XapI RAATTY 4 cut(s) 158, 403, 424, 1743
XceI RCATGY 2 cut(s) 918, 1316
XcmI CCANNNNNNNNNTGG 1 cut(s) 968
XmiI GTMKAC 1 cut(s) 804
XspI CTAG 4 cut(s) 696, 1163, 1925, 2165
ZrmI AGTACT 2 cut(s) 1404, 2264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.