RchiOBHm_Chr7g0233481

Bulb-type mannose-specific lectin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000299
Physical Location & Seq
Reverse (-)
57861628 .. 57864060
2433 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20929

Sequence Viewer

Length: 2433 bp
ATGATAAGTATTCTGCACATCATCACCCAGAGGCTTTCTCGTACCATGGCTTTTGCACTGCCGCATCTTTTATGCTTCCTAGTTTTCCTTCAACAATTGCCAATTTTCACCACTGCTCAAAATATATCTTTGGGCACATCCCTGACTGCAAAACCGGGCAATAGCTCTTTTTGGGCCTCACCATCTGGGGAATTTGCTTTCGGTTTCCAAGAAATTGGTAACCATGGTTTCCTACTAGCCATTTGGTTCAACAAAATAGCAGAAAGAACTATTGTCTGGTCAGCCAATGGCAACAGTCTAGTGCAAAAGGGATCCAGAGTTCAACTAACTAGTGAAGGCAAGATTATGCTCAACGATGCAGCGTCAGGCAAGCAAACACTGATTGCTGATTCCACTGCGAATGAAGTTGCATATGCAGCCATGCTCGACACGGGAAATTTTGTGCTGGCTAACAAAAATTCAGCCAATTTGTGGCAGAGTTTTGATCATCCCACGAATACAATCCTACCTACACAGACTTTATATCAAGGCACCACACTCTTTGCTCCCTATACGGCATCAAATTACTCGAAAGGAAGATTCATGTTTACATTAGAAGCTGGTGGAAATCTCTTGCTTTACACTACGCATTTCCCATTAGATACGGCCAATGCTGCTTATTGGTCAAGCGAAACTGAGGGTACCGGCTTTCAGGTCGTCTTTAACCAGTCTGGCTCTATTTTTCTTACTTCAAGGAATGGAAGCATACTTACTGTGGTAGTAAACAATACAGTTCCATTGCCAGGTTTCTACCGCAGAACAACTATCGACTATGATGGAGTATTGAGGTACTATATCTACCCGAAAAGCAGTAACTCGAGTGAAGGAGTGTGGCAGATGGCTTGGTCCACATTGTCCTTCATACCTTCAAACATCTGTGTCAACATTTCGTACTATAAAGGTGGTGGTGCGTGTGGTTTCAACAGCTTATGCAGAAATGACCAGAAACCGAGTTGCCAATGCCCAAATGGTTATGTCTTTGTTGATCCTGATGATGTGATGAGAGGATGCAAGCAGAACTTTCGTCCACAAAGTTGTGATGAGGTCCCATCGATGGAGGAATTTTATTTTGAAGAAATGCAAAACACAGATTGGAAGGAATCTGAGTACGAGAAGTACACGCCAGTGACTGAAGACTGGTGCAGGCAAGCTTGCCTAGCTGATTGTTTCTGTGCCCTTGCCAATTTCAGAAACGGGGATTGTTGGTTAAAGGGAATGCCTCTTCGGAATGGGAGGATCGACCCTAGCAGTGGTGTGAAAGCTCTCATCAAAATAAGGAGAGACAATTCCACTTTGAAACTGCCACATTCACCACATTCAAGAACAAAACGCAACTCAACTCTCTTGCTCGTTGGATCGGTGCTGTTGAGTAGCTCCGGGTTCTTAAACTTCCTCTTAGTGTTAATAACCTATTTGGTTGTTTCCGGTACTTACCGTAGAAGACCAAACATGATTCAACCTTACACAGTCTTGCCGGGTATGAACCTGATTTGTTTCAGTTATGAGGAGCTAAACAAAGCTACCATTGGATTCAAGGAAGAACTCGGTCGTGGTGCTTTTGGAACAGTTTTTAGAGGAGTTTTAGTGTCTGAGAAATGCGTAGCTGTCAAAAGACTGAACAATATGGTTAAAGAAAGCGAGTTAGAATTCAAAGCTGAATTGAGTGCAATTGGCAGAACAAATCACAGAAACCTAGTTCAACTACTAGGGTTCTGCAATGAAGGGCAGCACCGAATTCTTGTGTATGAGTTCATGAGCAATGGTTCTCTAGCAAGCTTCCTCTTTGGAAAGTCAAGGCCGAATTGGTACCGAAGGAAGGAGATTGCCTTGGGAACTGCTAGAGGGCTCTTGTATTTGCATGAGGAGTGCAGCAACCAAATCATACATTGCGACATTAAGCCTCAAAATATTCTCCTAGATGACTCTTTCACGGCAAGAATTTCCGACTTTGGATTAGCCAAGCTTTTGAAAACGGACCAGACTCGAACTACTACGGGAATCAGAGGGACAAAAGGGTACGTTGCCCCCGAATGGTTTAAAAACATGCCGATCACAACCAAGGTGGATGTTTACAGCTATGGCATTTTGTTACTGGAGATTATTTTTTGCAGAAAGTACTTTGAAGCAGAGGCAGAGAATGAACAACAAATGATACTAGCGGATTGGGCTTATGATTGCTACGCGGAGAAGAAGCTGCAGTTACTTTTGGAGAATGACGATGAGGCAATGCACGACATCGACAAGATGGAGAAGTACGTGATGATCGCATTGTGGTGTATTCAGGAGGATCCGTCATTGAGACCCACCGCCAAGAAACTCGCCCTGATGCTCGAAGGAACTCTTCAAGTCTCAGTTCCACCAGACCCGTCCTCATTCACAAGTTCAATAGTGTAA

Protein Analysis

810

Amino Acids

91.02

Weight (kDa)

7.43

Isoelectric Point (pI)

39.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 90 - 174 2e-15 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 524 - 787 2.9e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 525 - 786 1.7e-51 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000299)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43401 FvH4_3g43402 FvH4_3g43403 FvH4_3g43440 FvH4_3g43710 FvH4_3g43772
malus_domestica MD03G1021800.v1.1 MD03G1022000.v1.1 MD11G1024500.v1.1 MD11G1024700.v1.1 MD11G1025200.v1.1 MD11G1025500.v1.1 MD11G1025600.v1.1 MD11G1026200.v1.1 MD11G1026400.v1.1 MD11G1026500.v1.1 MD11G1026600.v1.1 MD11G1026800.v1.1 MD11G1027300.v1.1
prunus_persica Prupe.6G020400_v2.0.a1 Prupe.6G020500_v2.0.a1 Prupe.6G020600_v2.0.a1 Prupe.6G020700_v2.0.a1 Prupe.6G020800_v2.0.a1 Prupe.6G020900_v2.0.a1 Prupe.6G021000_v2.0.a1 Prupe.6G021500_v2.0.a1 Prupe.6G021600_v2.0.a1
pyrus_communis pycom03g01850 pycom03g01870 pycom03g01900 pycom03g01910 pycom11g01950 pycom11g01980 pycom11g01990 pycom11g02030 pycom11g02040
rosa_chinensis RchiOBHm_Chr5g0077411 RchiOBHm_Chr5g0077421 RchiOBHm_Chr5g0077571 RchiOBHm_Chr5g0077601 RchiOBHm_Chr5g0077621 RchiOBHm_Chr5g0077651 RchiOBHm_Chr5g0077661 RchiOBHm_Chr5g0077671 RchiOBHm_Chr5g0077701 RchiOBHm_Chr5g0077741 RchiOBHm_Chr5g0077791 RchiOBHm_Chr5g0077861 RchiOBHm_Chr5g0078871 RchiOBHm_Chr5g0078901 RchiOBHm_Chr5g0078941 RchiOBHm_Chr5g0079081 RchiOBHm_Chr5g0079091 RchiOBHm_Chr7g0233481
rosa_laevigata RLG00000036694 RLG00000036704 RLG00000036705 RLG00000036710 RLG00000036713 RLG00000036714 RLG00000036716 RLG00000036793 RLG00000036796 RLG00000036804 RLG00000036806
rosa_multiflora Rmu_co8130992.1_g000001 Rmu_sc0000029.1_g000037 Rmu_sc0002187.1_g000023 Rmu_sc0004168.1_g000001 Rmu_sc0004168.1_g000004 Rmu_sc0004168.1_g000018 Rmu_sc0004168.1_g000028 Rmu_sc0004168.1_g000033 Rmu_sc0004168.1_g000056 Rmu_sc0004277.1_g000009 Rmu_sc0004277.1_g000016 Rmu_sc0004277.1_g000018 Rmu_sc0004277.1_g000020 Rmu_sc0004277.1_g000084 Rmu_sc0004277.1_g000087 Rmu_sc0012487.1_g000001 Rmu_sc0012487.1_g000002
rosa_roxburghii Rroxscaffold_1G00003760 Rroxscaffold_1G00003780 Rroxscaffold_1G00004370 Rroxscaffold_1G00004400 Rroxscaffold_1G00004490 Rroxscaffold_1G00004510 Rroxscaffold_3G00227260 Rroxscaffold_5G00366480
rosa_rugosa Rorug05G0454800 Rorug05G0455700 Rorug05G0455900 Rorug05G0456100 Rorug05G0456300 Rorug05G0456700.1 Rorug05G0461800 Rorug05G0462100 Rorug07G0280900.1 Rorug07G0281000
rosa_samantha Rh5CG562200 Rh5DG543500 Rh5DG544200 Rh5DG544400 Rh5DG544500 Rh5DG544600 Rh5DG544700 Rh5DG544900 Rh5DG545200 Rh5DG549700 Rh7DG426000
rosa_wichuraiana Rw0G003130 Rw0G023780 Rw0G023790 Rw5G046780 Rw5G047330 Rw5G047350 Rw5G047370 Rw5G047390 Rw5G047420 Rw7G036050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 680, 1845
AccB1I GGYRCC 3 cut(s) 530, 680, 1845
AccB7I CCANNNNNTGG 1 cut(s) 471
AccII CGCG 1 cut(s) 2222
AciI CCGC 5 cut(s) 62, 793, 2198, 2222, 2346
AclWI GGATC 7 cut(s) 306, 319, 1019, 1283, 1402, 2321, 2334
AcoI YGGCCR 1 cut(s) 645
AcsI RAATTY 7 cut(s) 191, 436, 457, 1100, 1685, 1773, 1977
AcuI CTGAAG 1 cut(s) 1191
AfiI CCNNNNNNNGG 6 cut(s) 471, 782, 1093, 1289, 1855, 2070
AhlI ACTAGT 1 cut(s) 329
AjnI CCWGG 1 cut(s) 781
AleI CACNNNNGTG 1 cut(s) 1163
AloI GAACNNNNNNTCC 2 cut(s) 303, 335
Alw26I GTCTC 3 cut(s) 1314, 2332, 2392
AlwI GGATC 7 cut(s) 306, 319, 1019, 1283, 1402, 2321, 2334
AlwNI CAGNNNCTG 1 cut(s) 1169
Ama87I CYCGRG 1 cut(s) 856
AoxI GGCC 3 cut(s) 174, 645, 1835
ApeKI GCWGC 6 cut(s) 359, 416, 653, 1765, 1908, 2233
ApoI RAATTY 7 cut(s) 191, 436, 457, 1100, 1685, 1773, 1977
Asp718I GGTACC 2 cut(s) 680, 1845
AspS9I GGNCC 4 cut(s) 174, 885, 1084, 2014
AsuC2I CCSGG 3 cut(s) 156, 1417, 1515
AsuHPI GGTGA 4 cut(s) 16, 100, 171, 1341
AvaI CYCGRG 1 cut(s) 856
AvaII GGWCC 3 cut(s) 885, 1084, 2014
BaeGI GKGCMC 2 cut(s) 137, 1216
BamHI GGATCC 2 cut(s) 311, 2326
BanI GGYRCC 3 cut(s) 530, 680, 1845
BanII GRGCYC 1 cut(s) 1887
BarI GAAGNNNNNNTAC 2 cut(s) 733, 765
BbsI GAAGAC 2 cut(s) 1179, 1486
BbvI GCAGC 6 cut(s) 371, 428, 640, 1777, 1920, 2220
BccI CCATC 6 cut(s) 190, 809, 871, 1087, 1096, 2278
BceAI ACGGC 3 cut(s) 570, 660, 1986
BcgI CGANNNNNNTGC 2 cut(s) 1043, 1077
BciT130I CCWGG 1 cut(s) 783
BclI TGATCA 1 cut(s) 484
BcnI CCSGG 3 cut(s) 156, 1417, 1515
BcoDI GTCTC 3 cut(s) 1314, 2332, 2392
BcuI ACTAGT 1 cut(s) 329
BfmI CTRYAG 1 cut(s) 2234
BisI GCNGC 7 cut(s) 62, 360, 417, 654, 1766, 1909, 2234
BlsI GCNGC 7 cut(s) 63, 361, 418, 655, 1767, 1910, 2235
BmcAI AGTACT 1 cut(s) 2156
Bme1390I CCNGG 4 cut(s) 156, 783, 1417, 1515
Bme18I GGWCC 3 cut(s) 885, 1084, 2014
BmeT110I CYCGRG 1 cut(s) 856
BmgT120I GGNCC 4 cut(s) 174, 885, 1084, 2014
BmiI GGNNCC 6 cut(s) 313, 532, 682, 1086, 1847, 2328
BmrFI CCNGG 4 cut(s) 156, 783, 1417, 1515
BmsI GCATC 5 cut(s) 73, 346, 566, 1037, 2355
BpiI GAAGAC 2 cut(s) 1179, 1486
BplI GAGNNNNNCTC 2 cut(s) 22, 54
BpmI CTGGAG 1 cut(s) 2153
BpuMI CCSGG 3 cut(s) 156, 1417, 1515
Bsa29I ATCGAT 1 cut(s) 1091
BsaAI YACGTR 1 cut(s) 2296
BsaI GGTCTC 1 cut(s) 2332
BsaJI CCNNGG 4 cut(s) 45, 223, 1866, 2097
BsaWI WCCGGW 1 cut(s) 1463
BsaXI ACNNNNNCTCC 4 cut(s) 1608, 1638, 2315, 2345
Bsc4I CCNNNNNNNGG 6 cut(s) 471, 782, 1093, 1289, 1855, 2070
Bse118I RCCGGY 1 cut(s) 683
Bse1I ACTGG 4 cut(s) 706, 1163, 1181, 2136
Bse3DI GCAATG 5 cut(s) 776, 1762, 1804, 1924, 2271
BseBI CCWGG 1 cut(s) 783
BseCI ATCGAT 1 cut(s) 1091
BseDI CCNNGG 4 cut(s) 45, 223, 1866, 2097
BseGI GGATG 4 cut(s) 137, 487, 1052, 2110
BseLI CCNNNNNNNGG 6 cut(s) 471, 782, 1093, 1289, 1855, 2070
BseMI GCAATG 5 cut(s) 776, 1762, 1804, 1924, 2271
BseMII CTCAG 4 cut(s) 666, 1134, 1620, 2403
BseNI ACTGG 4 cut(s) 706, 1163, 1181, 2136
BseRI GAGGAG 3 cut(s) 1559, 1629, 1916
BseSI GKGCMC 2 cut(s) 137, 1216
BseXI GCAGC 6 cut(s) 371, 428, 640, 1777, 1920, 2220
BsgI GTGCAG 2 cut(s) 1201, 1927
Bsh1236I CGCG 1 cut(s) 2222
Bsh1285I CGRYCG 1 cut(s) 1588
BshFI GGCC 3 cut(s) 176, 647, 1837
BshNI GGYRCC 3 cut(s) 530, 680, 1845
BshVI ATCGAT 1 cut(s) 1091
BsiEI CGRYCG 1 cut(s) 1588
BsiHKCI CYCGRG 1 cut(s) 856
BsiSI CCGG 5 cut(s) 155, 684, 1416, 1464, 1514
BslFI GGGAC 2 cut(s) 1070, 2059
BslI CCNNNNNNNGG 6 cut(s) 471, 782, 1093, 1289, 1855, 2070
BsmAI GTCTC 3 cut(s) 1314, 2332, 2392
BsmFI GGGAC 2 cut(s) 1070, 2059
BsmI GAATGC 1 cut(s) 1260
BsnI GGCC 3 cut(s) 176, 647, 1837
Bso31I GGTCTC 1 cut(s) 2332
BsoBI CYCGRG 1 cut(s) 856
Bsp1286I GDGCHC 3 cut(s) 137, 1216, 1887
Bsp143I GATC 8 cut(s) 311, 484, 1024, 1275, 1394, 2088, 2301, 2326
Bsp19I CCATGG 2 cut(s) 45, 223
BspACI CCGC 5 cut(s) 62, 793, 2198, 2222, 2346
BspANI GGCC 3 cut(s) 176, 647, 1837
BspCNI CTCAG 4 cut(s) 667, 1135, 1621, 2402
BspDI ATCGAT 1 cut(s) 1091
BspFNI CGCG 1 cut(s) 2222
BspHI TCATGA 1 cut(s) 1791
BspLI GGNNCC 6 cut(s) 313, 532, 682, 1086, 1847, 2328
BspMAI CTGCAG 1 cut(s) 2238
BspPI GGATC 7 cut(s) 306, 319, 1019, 1283, 1402, 2321, 2334
BspT107I GGYRCC 3 cut(s) 530, 680, 1845
BspTNI GGTCTC 1 cut(s) 2332
BsrDI GCAATG 5 cut(s) 776, 1762, 1804, 1924, 2271
BsrFI RCCGGY 1 cut(s) 683
BsrI ACTGG 4 cut(s) 706, 1163, 1181, 2136
BssAI RCCGGY 1 cut(s) 683
BssECI CCNNGG 4 cut(s) 45, 223, 1866, 2097
BssMI GATC 8 cut(s) 311, 484, 1024, 1275, 1394, 2088, 2301, 2326
BssT1I CCWWGG 4 cut(s) 45, 223, 1866, 2097
Bst2UI CCWGG 1 cut(s) 783
Bst4CI ACNGT 6 cut(s) 296, 754, 772, 1475, 1507, 1606
Bst6I CTCTTC 2 cut(s) 1266, 2385
BstBAI YACGTR 1 cut(s) 2296
BstC8I GCNNGC 7 cut(s) 371, 447, 1052, 1184, 1188, 1192, 1813
BstDEI CTNAG 5 cut(s) 675, 1143, 1435, 1629, 2389
BstDSI CCRYGG 2 cut(s) 45, 223
BstEII GGTNACC 1 cut(s) 218
BstF5I GGATG 4 cut(s) 137, 487, 1052, 2110
BstFNI CGCG 1 cut(s) 2222
BstKTI GATC 8 cut(s) 314, 487, 1027, 1278, 1397, 2091, 2304, 2329
BstMAI GTCTC 3 cut(s) 1314, 2332, 2392
BstMBI GATC 8 cut(s) 311, 484, 1024, 1275, 1394, 2088, 2301, 2326
BstMCI CGRYCG 1 cut(s) 1588
BstMWI GCNNNNNNNGC 4 cut(s) 416, 653, 1196, 2204
BstNI CCWGG 1 cut(s) 783
BstNSI RCATGY 1 cut(s) 2086
BstPI GGTNACC 1 cut(s) 218
BstSCI CCNGG 4 cut(s) 154, 781, 1415, 1513
BstSFI CTRYAG 1 cut(s) 2234
BstSLI GKGCMC 2 cut(s) 137, 1216
BstUI CGCG 1 cut(s) 2222
BstV1I GCAGC 6 cut(s) 371, 428, 640, 1777, 1920, 2220
BstV2I GAAGAC 2 cut(s) 1179, 1486
BstX2I RGATCY 2 cut(s) 311, 2326
BstXI CCANNNNNNTGG 1 cut(s) 215
BstYI RGATCY 2 cut(s) 311, 2326
Bsu15I ATCGAT 1 cut(s) 1091
BsuRI GGCC 3 cut(s) 176, 647, 1837
BsuTUI ATCGAT 1 cut(s) 1091
BtgI CCRYGG 2 cut(s) 45, 223
BtsCI GGATG 4 cut(s) 137, 487, 1052, 2110
BtsI GCAGTG 4 cut(s) 56, 111, 393, 1294
BtsIMutI CAGTG 6 cut(s) 56, 111, 377, 393, 1170, 1294
Cac8I GCNNGC 7 cut(s) 371, 447, 1052, 1184, 1188, 1192, 1813
CaiI CAGNNNCTG 1 cut(s) 1169
CciI TCATGA 1 cut(s) 1791
Cfr10I RCCGGY 1 cut(s) 683
Cfr13I GGNCC 4 cut(s) 174, 885, 1084, 2014
ClaI ATCGAT 1 cut(s) 1091
CseI GACGC 1 cut(s) 351
CspCI CAANNNNNGTGG 4 cut(s) 523, 558, 2082, 2117
CviAII CATG 8 cut(s) 46, 224, 421, 583, 1489, 1792, 1898, 2083
DdeI CTNAG 5 cut(s) 675, 1143, 1435, 1629, 2389
DpnI GATC 8 cut(s) 313, 486, 1026, 1277, 1396, 2090, 2303, 2328
DpnII GATC 8 cut(s) 311, 484, 1024, 1275, 1394, 2088, 2301, 2326
DraI TTTAAA 1 cut(s) 2077
EaeI YGGCCR 1 cut(s) 645
Eam1104I CTCTTC 2 cut(s) 1266, 2385
EarI CTCTTC 2 cut(s) 1266, 2385
Eco130I CCWWGG 4 cut(s) 45, 223, 1866, 2097
Eco24I GRGCYC 1 cut(s) 1887
Eco31I GGTCTC 1 cut(s) 2332
Eco47I GGWCC 3 cut(s) 885, 1084, 2014
Eco57I CTGAAG 1 cut(s) 1191
Eco88I CYCGRG 1 cut(s) 856
Eco91I GGTNACC 1 cut(s) 218
EcoO109I RGGNCCY 1 cut(s) 1084
EcoO65I GGTNACC 1 cut(s) 218
EcoRI GAATTC 2 cut(s) 1685, 1773
EcoRII CCWGG 1 cut(s) 781
EcoT14I CCWWGG 4 cut(s) 45, 223, 1866, 2097
EcoT38I GRGCYC 1 cut(s) 1887
ErhI CCWWGG 4 cut(s) 45, 223, 1866, 2097
FaeI CATG 8 cut(s) 49, 227, 424, 586, 1492, 1795, 1901, 2086
FalI AAGNNNNNCTT 4 cut(s) 1043, 1075, 2364, 2396
FaqI GGGAC 2 cut(s) 1070, 2059
FatI CATG 8 cut(s) 45, 223, 420, 582, 1488, 1791, 1897, 2082
FauNDI CATATG 1 cut(s) 412
FbaI TGATCA 1 cut(s) 484
Fnu4HI GCNGC 7 cut(s) 62, 360, 417, 654, 1766, 1909, 2234
FokI GGATG 4 cut(s) 124, 474, 1059, 2117
FriOI GRGCYC 1 cut(s) 1887
Fsp4HI GCNGC 7 cut(s) 62, 360, 417, 654, 1766, 1909, 2234
GluI GCNGC 7 cut(s) 62, 360, 417, 654, 1766, 1909, 2234
GsuI CTGGAG 1 cut(s) 2153
HaeIII GGCC 3 cut(s) 176, 647, 1837
HapII CCGG 5 cut(s) 155, 684, 1416, 1464, 1514
HgaI GACGC 1 cut(s) 351
Hin1II CATG 8 cut(s) 49, 227, 424, 586, 1492, 1795, 1901, 2086
HincII GTYRAC 1 cut(s) 922
HindII GTYRAC 1 cut(s) 922
HindIII AAGCTT 3 cut(s) 1188, 1813, 2000
HinfI GANTC 8 cut(s) 389, 579, 1139, 1492, 1569, 1961, 2020, 2037
HpaII CCGG 5 cut(s) 155, 684, 1416, 1464, 1514
HphI GGTGA 4 cut(s) 16, 100, 171, 1341
Hpy166II GTNNAC 7 cut(s) 588, 763, 888, 922, 1067, 1158, 2110
Hpy188I TCNGA 6 cut(s) 1144, 1229, 1266, 1630, 1984, 2042
Hpy188III TCNNGA 5 cut(s) 315, 1028, 1359, 1792, 2321
Hpy8I GTNNAC 7 cut(s) 588, 763, 888, 922, 1067, 1158, 2110
HpyCH4III ACNGT 6 cut(s) 296, 754, 772, 1475, 1507, 1606
HpyCH4IV ACGT 2 cut(s) 2058, 2295
HpyF10VI GCNNNNNNNGC 4 cut(s) 416, 653, 1196, 2204
HpyF3I CTNAG 5 cut(s) 675, 1143, 1435, 1629, 2389
HpySE526I ACGT 2 cut(s) 2058, 2295
Hsp92II CATG 8 cut(s) 49, 227, 424, 586, 1492, 1795, 1901, 2086
KpnI GGTACC 2 cut(s) 684, 1849
Ksp22I TGATCA 1 cut(s) 484
Kzo9I GATC 8 cut(s) 311, 484, 1024, 1275, 1394, 2088, 2301, 2326
LmnI GCTCC 3 cut(s) 550, 1418, 1546
Lsp1109I GCAGC 6 cut(s) 371, 428, 640, 1777, 1920, 2220
LweI GCATC 5 cut(s) 73, 346, 566, 1037, 2355
MaeII ACGT 2 cut(s) 2058, 2295
MaeIII GTNAC 5 cut(s) 218, 851, 1165, 2127, 2238
MalI GATC 8 cut(s) 313, 486, 1026, 1277, 1396, 2090, 2303, 2328
MboI GATC 8 cut(s) 311, 484, 1024, 1275, 1394, 2088, 2301, 2326
MboII GAAGA 8 cut(s) 588, 1124, 1184, 1253, 1491, 1589, 2239, 2372
MfeI CAATTG 2 cut(s) 95, 1707
MflI RGATCY 2 cut(s) 311, 2326
MhlI GDGCHC 3 cut(s) 137, 1216, 1887
MlyI GAGTC 2 cut(s) 1955, 2014
MmeI TCCRAC 2 cut(s) 1372, 2007
MseI TTAA 7 cut(s) 702, 1247, 1424, 1442, 1668, 1935, 2076
MslI CAYNNNNRTG 2 cut(s) 1163, 2311
MspI CCGG 5 cut(s) 155, 684, 1416, 1464, 1514
MspR9I CCNGG 4 cut(s) 156, 783, 1417, 1515
MunI CAATTG 2 cut(s) 95, 1707
Mva1269I GAATGC 1 cut(s) 1260
MvaI CCWGG 1 cut(s) 783
MvnI CGCG 1 cut(s) 2222
MwoI GCNNNNNNNGC 4 cut(s) 416, 653, 1196, 2204
NciI CCSGG 3 cut(s) 156, 1417, 1515
NcoI CCATGG 2 cut(s) 45, 223
NdeI CATATG 1 cut(s) 412
NdeII GATC 8 cut(s) 311, 484, 1024, 1275, 1394, 2088, 2301, 2326
NlaIII CATG 8 cut(s) 49, 227, 424, 586, 1492, 1795, 1901, 2086
NlaIV GGNNCC 6 cut(s) 313, 532, 682, 1086, 1847, 2328
NmuCI GTSAC 1 cut(s) 1165
NspI RCATGY 1 cut(s) 2086
OliI CACNNNNGTG 1 cut(s) 1163
PaeR7I CTCGAG 1 cut(s) 856
PagI TCATGA 1 cut(s) 1791
PcsI WCGNNNNNNNCGW 1 cut(s) 2064
PctI GAATGC 1 cut(s) 1260
PfeI GAWTC 6 cut(s) 389, 579, 1139, 1492, 1569, 2037
PflMI CCANNNNNTGG 1 cut(s) 471
PkrI GCNGC 7 cut(s) 63, 361, 418, 655, 1767, 1910, 2235
PleI GAGTC 2 cut(s) 1955, 2014
PpsI GAGTC 2 cut(s) 1955, 2014
Ppu21I YACGTR 1 cut(s) 2296
PpuMI RGGWCCY 1 cut(s) 1084
Psp5II RGGWCCY 1 cut(s) 1084
Psp6I CCWGG 1 cut(s) 781
PspEI GGTNACC 1 cut(s) 218
PspGI CCWGG 1 cut(s) 781
PspN4I GGNNCC 6 cut(s) 313, 532, 682, 1086, 1847, 2328
PspPI GGNCC 4 cut(s) 174, 885, 1084, 2014
PspPPI RGGWCCY 1 cut(s) 1084
PspXI VCTCGAGB 1 cut(s) 856
PstI CTGCAG 1 cut(s) 2238
PstNI CAGNNNCTG 1 cut(s) 1169
PsuI RGATCY 2 cut(s) 311, 2326
RseI CAYNNNNRTG 2 cut(s) 1163, 2311
SaqAI TTAA 7 cut(s) 702, 1247, 1424, 1442, 1668, 1935, 2076
SatI GCNGC 7 cut(s) 62, 360, 417, 654, 1766, 1909, 2234
Sau3AI GATC 8 cut(s) 311, 484, 1024, 1275, 1394, 2088, 2301, 2326
Sau96I GGNCC 4 cut(s) 174, 885, 1084, 2014
ScaI AGTACT 1 cut(s) 2156
SchI GAGTC 2 cut(s) 1955, 2014
ScrFI CCNGG 4 cut(s) 156, 783, 1417, 1515
SduI GDGCHC 3 cut(s) 137, 1216, 1887
SfaNI GCATC 5 cut(s) 73, 346, 566, 1037, 2355
SfcI CTRYAG 1 cut(s) 2234
Sfr274I CTCGAG 1 cut(s) 856
SinI GGWCC 3 cut(s) 885, 1084, 2014
SlaI CTCGAG 1 cut(s) 856
SmiMI CAYNNNNRTG 2 cut(s) 1163, 2311
SmlI CTYRAG 1 cut(s) 856
SmoI CTYRAG 1 cut(s) 856
SpeI ACTAGT 1 cut(s) 329
SsiI CCGC 5 cut(s) 62, 793, 2198, 2222, 2346
SspI AATATT 1 cut(s) 1948
StyD4I CCNGG 4 cut(s) 154, 781, 1415, 1513
StyI CCWWGG 4 cut(s) 45, 223, 1866, 2097
TaaI ACNGT 6 cut(s) 296, 754, 772, 1475, 1507, 1606
TaiI ACGT 2 cut(s) 2061, 2298
TaqI TCGA 9 cut(s) 426, 569, 807, 857, 1091, 1278, 2023, 2277, 2370
TaqII GACCGA 1 cut(s) 1574
TatI WGTACW 2 cut(s) 1155, 2154
TauI GCSGC 1 cut(s) 64
TfiI GAWTC 6 cut(s) 389, 579, 1139, 1492, 1569, 2037
Tru1I TTAA 7 cut(s) 702, 1247, 1424, 1442, 1668, 1935, 2076
Tru9I TTAA 7 cut(s) 702, 1247, 1424, 1442, 1668, 1935, 2076
TscAI CASTG 6 cut(s) 63, 118, 384, 400, 1170, 1294
TseFI GTSAC 1 cut(s) 1165
TseI GCWGC 6 cut(s) 359, 416, 653, 1765, 1908, 2233
Tsp45I GTSAC 1 cut(s) 1165
TspDTI ATGAA 7 cut(s) 417, 571, 889, 1535, 1773, 1780, 2193
TspGWI ACGGA 2 cut(s) 2027, 2319
TspRI CASTG 6 cut(s) 63, 118, 384, 400, 1170, 1294
Van91I CCANNNNNTGG 1 cut(s) 471
VpaK11BI GGWCC 3 cut(s) 885, 1084, 2014
XapI RAATTY 7 cut(s) 191, 436, 457, 1100, 1685, 1773, 1977
XceI RCATGY 1 cut(s) 2086
XcmI CCANNNNNNNNNTGG 1 cut(s) 1004
XhoI CTCGAG 1 cut(s) 856
ZrmI AGTACT 1 cut(s) 2156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.