Rw5G046780

Bulb-type mannose-specific lectin

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
81060425 .. 81062842
2418 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G046780.1

Sequence Viewer

Length: 2418 bp
ATGGCTTCTGTACTACCATATCCTTTTCACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTACAGCTACTCCCAATTTCCGCAATTGCTCAAACTTATAAGAACATATCCTTGGGCTCATCACTCACTGCACTTGACAATAACTCTTTCTGGGCCTCGCCATCGGGGGAATTCGCTTTCGGTTTCCAAGAAGTCAGTAATAATGGCTTCTTACTAGCCATTTGGTTTAACAAAATAGCTGAAAGGACTATTGTATGGTCAGCCAATGGCAACAATCTAGTGCAAAAAGGATCCAAAGTCGTACTTAATGCAGATGGCCAGCTTTTACTCAATGATGTTGTGACAAGCACACAGACACGGCTTGCCGATTCCGCTCAGATGGGAGTAGCCTATGCAGCCATGCTCGACACAGGAAATTTCGTGTTGGCTAATCAAAATTCAATGTATTTGTGGGAGAGTTTTACTAGGCCAACAAATACACTTCTACCCACGCAGACTCTAAATCAAGGCACCATCCTCTTTGCTCCCACAACAGCAACAAATTACTCCAAAGGAAGATTCATGTTTACACTAAAAGATGATGGAAATCTCCTGCTTTACACAACACATTACCCATCGGATTCTGCTAATTTTCCTTATTGGTCAGCACAAAGTATGGGGATCGGATATCAAGTCATCTTCAACCAGACTGGAGCTATTTACCTTGTTAGCAAGAACGGAAGCATACTTACTGCTGTACTAAACAATACAGCTTCAACCATGGGGTTCTACCGCAGAGTAACTCTTGACTATGATGGAGTGTTGAGGTACTATGTCTACCCTAAAAGCACTAATTCAAGTGCAGTGTGGCTCAAGGCTTGGTCCCCTTTGTCCTTCATACCTTCAGACATCTGTGTGAGGATTATAGAAGATAATGGCGGTGGTGCATGTGGTTTCAACGGCTTATGTCAACATGACCAAGGGCCAAGTTGCCACTGCCCAGATGGATACACCTTCATTGATCCTAATGATGAGCTCAGAGGATGCAAACAGAACTTCGTGCCACAAAGCTGTGATGCGGCCTCACCGGAGACTGATCTTTTCTATTTTGAAGAGATGCAAAACACAGATTGGCCTCAATCTGATTATGAGACGTTTACGCCGGTAACTGAGGATTGGTGCAGGCAGACTTGCCTAGCTGATTGTTTCTGTGCAGTTGCTAATTTCAGAAACGGGGACTGCTGGATCAAGTCAATACCTCTTCGCAACGGAAGGATTGACCCCAGTAATGGTGTAAAAGCTCTAATCAAAATAAGGAGAGGTAATTCTACTTTGAAACCTGAACATGCACCTTCAAGAAGGAAAAATCGTTCAACTCTGATCCTTGTCGGATCAGTGCTCCTGAGTAGCTCCGGGTTTCTAAACTTTCTCTTTGTACTGATAACTTATATGGTTGTTTCCGGTTTCTATTTCAAGAAAGGAAATGTGGTTCAACCATACCCAGTCATACCAGGGATGAACCTAATATGTTTCACATATGAGGAGCTAAATAAGGCTACGAATGGATTTAAGGAAGAACTTGGTCGTGGTGCTTTTGCAGAAGTTTTTAGAGGAGATTTAGCGTCTGATAATGGCAGATCTGTTGCTGTCAAAAGATTGAACACTAAGGTAAAAGAAAGTGAGTTGGAGTTCAAAGCTGAATTGAGTGCAATTGGCAGAACAAATCACAGAAACTTGGTTCAACTACTAGGATTCTGCAACGAGGGGGAGCACCGAATTCTTGTCTACGAGTTCATGAGCAACGGCTCTCTAGCAAGCTTCCTATTTGGAGAGTCAAGGCCGAGTTGGCACCAAAGAAGGCAAATTGCCTTGGGTACAGCAAGAGGGCTCTTGTATTTGCATGAGGAGTGCAGCAGCCAAATCATACATTGTGACATTAAGCCTCAAAATGTTCTCCTAGATGACTCTTTCACAGCAAGGATTTCTGACTTTGGATTAGCCAAGCTGTTGAAGACGGACCAGACTCGAACTACTACTGGAATCAGGGGAACTAGAGGGTATGTGGCTCCTGAATGGTTCAAAAATATGCCTATCACAACTAAGGTTGATGTTTACAGCTACGGGATTTTGTTACTTGAGATCATTTGCTTGAGGAAGTATTTTGAGGCAGAGGCAGAGGTTGAAGATCAAATGATACTAGCTGACTGGGCATATGACTGCTATGTGGAAAAGAAACTGCATCTGCTATTTGACAATGATGATGAGGCAGTGCATGATATCAAGAATTTGGAGAAGTACTTGATGATCGCATTCTGGTGCATACAGGAGGATCCGTCACTGAGACCCACAACGAAGAAACTCACATTGATGCTGGAAGGAACTGTCGAAGTCTCAATTCCACCAGATCCATCCTCATTTACAAGTTCAATATTGTAA

Protein Analysis

805

Amino Acids

90.13

Weight (kDa)

5.76

Isoelectric Point (pI)

34.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 84 - 169 2.6e-13 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 517 - 781 6.2e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 518 - 781 8.5e-50 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000299)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43401 FvH4_3g43402 FvH4_3g43403 FvH4_3g43440 FvH4_3g43710 FvH4_3g43772
malus_domestica MD03G1021800.v1.1 MD03G1022000.v1.1 MD11G1024500.v1.1 MD11G1024700.v1.1 MD11G1025200.v1.1 MD11G1025500.v1.1 MD11G1025600.v1.1 MD11G1026200.v1.1 MD11G1026400.v1.1 MD11G1026500.v1.1 MD11G1026600.v1.1 MD11G1026800.v1.1 MD11G1027300.v1.1
prunus_persica Prupe.6G020400_v2.0.a1 Prupe.6G020500_v2.0.a1 Prupe.6G020600_v2.0.a1 Prupe.6G020700_v2.0.a1 Prupe.6G020800_v2.0.a1 Prupe.6G020900_v2.0.a1 Prupe.6G021000_v2.0.a1 Prupe.6G021500_v2.0.a1 Prupe.6G021600_v2.0.a1
pyrus_communis pycom03g01850 pycom03g01870 pycom03g01900 pycom03g01910 pycom11g01950 pycom11g01980 pycom11g01990 pycom11g02030 pycom11g02040
rosa_chinensis RchiOBHm_Chr5g0077411 RchiOBHm_Chr5g0077421 RchiOBHm_Chr5g0077571 RchiOBHm_Chr5g0077601 RchiOBHm_Chr5g0077621 RchiOBHm_Chr5g0077651 RchiOBHm_Chr5g0077661 RchiOBHm_Chr5g0077671 RchiOBHm_Chr5g0077701 RchiOBHm_Chr5g0077741 RchiOBHm_Chr5g0077791 RchiOBHm_Chr5g0077861 RchiOBHm_Chr5g0078871 RchiOBHm_Chr5g0078901 RchiOBHm_Chr5g0078941 RchiOBHm_Chr5g0079081 RchiOBHm_Chr5g0079091 RchiOBHm_Chr7g0233481
rosa_laevigata RLG00000036694 RLG00000036704 RLG00000036705 RLG00000036710 RLG00000036713 RLG00000036714 RLG00000036716 RLG00000036793 RLG00000036796 RLG00000036804 RLG00000036806
rosa_multiflora Rmu_co8130992.1_g000001 Rmu_sc0000029.1_g000037 Rmu_sc0002187.1_g000023 Rmu_sc0004168.1_g000001 Rmu_sc0004168.1_g000004 Rmu_sc0004168.1_g000018 Rmu_sc0004168.1_g000028 Rmu_sc0004168.1_g000033 Rmu_sc0004168.1_g000056 Rmu_sc0004277.1_g000009 Rmu_sc0004277.1_g000016 Rmu_sc0004277.1_g000018 Rmu_sc0004277.1_g000020 Rmu_sc0004277.1_g000084 Rmu_sc0004277.1_g000087 Rmu_sc0012487.1_g000001 Rmu_sc0012487.1_g000002
rosa_roxburghii Rroxscaffold_1G00003760 Rroxscaffold_1G00003780 Rroxscaffold_1G00004370 Rroxscaffold_1G00004400 Rroxscaffold_1G00004490 Rroxscaffold_1G00004510 Rroxscaffold_3G00227260 Rroxscaffold_5G00366480
rosa_rugosa Rorug05G0454800 Rorug05G0455700 Rorug05G0455900 Rorug05G0456100 Rorug05G0456300 Rorug05G0456700.1 Rorug05G0461800 Rorug05G0462100 Rorug07G0280900.1 Rorug07G0281000
rosa_samantha Rh5CG562200 Rh5DG543500 Rh5DG544200 Rh5DG544400 Rh5DG544500 Rh5DG544600 Rh5DG544700 Rh5DG544900 Rh5DG545200 Rh5DG549700 Rh7DG426000
rosa_wichuraiana Rw0G003130 Rw0G023780 Rw0G023790 Rw5G046780 Rw5G047330 Rw5G047350 Rw5G047370 Rw5G047390 Rw5G047420 Rw7G036050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 102
AccB1I GGYRCC 2 cut(s) 512, 1830
AccBSI CCGCTC 1 cut(s) 377
AccI GTMKAC 2 cut(s) 819, 1767
AciI CCGC 5 cut(s) 84, 375, 775, 921, 1061
AcoI YGGCCR 1 cut(s) 319
AcsI RAATTY 5 cut(s) 173, 418, 439, 1758, 2266
AcuI CTGAAG 1 cut(s) 870
AfaI GTAC 7 cut(s) 12, 306, 741, 812, 1419, 1858, 2279
AfiI CCNNNNNNNGG 1 cut(s) 1271
AjnI CCWGG 1 cut(s) 1492
AjuI GAANNNNNNNTTGG 4 cut(s) 98, 130, 545, 577
AloI GAACNNNNNNTCC 4 cut(s) 1336, 1368, 1455, 1487
Alw21I GWGCWC 3 cut(s) 1020, 1383, 1755
Alw26I GTCTC 4 cut(s) 1067, 1127, 2317, 2377
AoxI GGCC 7 cut(s) 156, 319, 470, 965, 1062, 1115, 1820
ApeKI GCWGC 3 cut(s) 398, 1893, 1896
ApoI RAATTY 5 cut(s) 173, 418, 439, 1758, 2266
AspS9I GGNCC 4 cut(s) 156, 864, 965, 1999
AsuC2I CCSGG 1 cut(s) 1396
AsuHPI GGTGA 2 cut(s) 20, 1059
AvaII GGWCC 2 cut(s) 864, 1999
BalI TGGCCA 1 cut(s) 321
BamHI GGATCC 2 cut(s) 293, 2311
BanI GGYRCC 2 cut(s) 512, 1830
BanII GRGCYC 3 cut(s) 122, 1020, 1872
BarI GAAGNNNNNNTAC 2 cut(s) 715, 747
BbsI GAAGAC 1 cut(s) 2000
Bbv12I GWGCWC 3 cut(s) 1020, 1383, 1755
BbvI GCAGC 3 cut(s) 410, 1905, 1908
BccI CCATC 9 cut(s) 172, 311, 376, 524, 578, 625, 791, 980, 2398
BceAI ACGGC 3 cut(s) 377, 958, 1801
BciT130I CCWGG 1 cut(s) 1494
BciVI GTATCC 1 cut(s) 983
BcnI CCSGG 1 cut(s) 1396
BcoDI GTCTC 4 cut(s) 1067, 1127, 2317, 2377
BfaI CTAG 9 cut(s) 218, 281, 468, 1178, 1730, 1793, 1940, 2034, 2180
BfmI CTRYAG 1 cut(s) 65
BfuI GTATCC 1 cut(s) 983
BglI GCCNNNNNGGC 1 cut(s) 1828
BglII AGATCT 1 cut(s) 1619
BisI GCNGC 4 cut(s) 399, 1062, 1894, 1897
BlsI GCNGC 4 cut(s) 400, 1063, 1895, 1898
BmcAI AGTACT 1 cut(s) 2279
Bme1390I CCNGG 2 cut(s) 1396, 1494
Bme18I GGWCC 2 cut(s) 864, 1999
BmgT120I GGNCC 4 cut(s) 156, 864, 965, 1999
BmiI GGNNCC 6 cut(s) 295, 514, 866, 1832, 2049, 2313
BmrFI CCNGG 2 cut(s) 1396, 1494
BmrI ACTGGG 3 cut(s) 1260, 1478, 2197
BmsI GCATC 5 cut(s) 1016, 1048, 1089, 2230, 2340
BmuI ACTGGG 3 cut(s) 1260, 1478, 2197
BpiI GAAGAC 1 cut(s) 2000
BpmI CTGGAG 1 cut(s) 714
BpuEI CTTGAG 3 cut(s) 839, 2138, 2152
BpuMI CCSGG 1 cut(s) 1396
BsaBI GATNNNNATC 1 cut(s) 588
BsaI GGTCTC 1 cut(s) 2317
BsaJI CCNNGG 5 cut(s) 114, 762, 961, 1493, 1851
BsaWI WCCGGW 2 cut(s) 1069, 1442
BsaXI ACNNNNNCTCC 4 cut(s) 57, 87, 2300, 2330
Bsc4I CCNNNNNNNGG 1 cut(s) 1271
Bse118I RCCGGY 1 cut(s) 1144
Bse1I ACTGG 5 cut(s) 697, 1266, 1484, 2023, 2192
Bse8I GATNNNNATC 1 cut(s) 588
BseBI CCWGG 1 cut(s) 1494
BseDI CCNNGG 5 cut(s) 114, 762, 961, 1493, 1851
BseGI GGATG 4 cut(s) 516, 1031, 1503, 2390
BseJI GATNNNNATC 1 cut(s) 588
BseLI CCNNNNNNNGG 1 cut(s) 1271
BseMII CTCAG 5 cut(s) 392, 1033, 1143, 1376, 2312
BseNI ACTGG 5 cut(s) 697, 1266, 1484, 2023, 2192
BseRI GAGGAG 3 cut(s) 1538, 1608, 1901
BseXI GCAGC 3 cut(s) 410, 1905, 1908
BsgI GTGCAG 5 cut(s) 117, 864, 1183, 1215, 1912
BshFI GGCC 7 cut(s) 158, 321, 472, 967, 1064, 1117, 1822
BshNI GGYRCC 2 cut(s) 512, 1830
BsiHKAI GWGCWC 3 cut(s) 1020, 1383, 1755
BsiSI CCGG 4 cut(s) 1070, 1145, 1395, 1443
BslFI GGGAC 2 cut(s) 850, 1232
BslI CCNNNNNNNGG 1 cut(s) 1271
BsmAI GTCTC 4 cut(s) 1067, 1127, 2317, 2377
BsmBI CGTCTC 1 cut(s) 1127
BsmFI GGGAC 2 cut(s) 850, 1232
BsmI GAATGC 1 cut(s) 2291
BsnI GGCC 7 cut(s) 158, 321, 472, 967, 1064, 1117, 1822
Bso31I GGTCTC 1 cut(s) 2317
Bsp1286I GDGCHC 5 cut(s) 122, 1020, 1383, 1755, 1872
Bsp19I CCATGG 1 cut(s) 762
BspACI CCGC 5 cut(s) 84, 375, 775, 921, 1061
BspANI GGCC 7 cut(s) 158, 321, 472, 967, 1064, 1117, 1822
BspCNI CTCAG 5 cut(s) 391, 1032, 1144, 1377, 2313
BspHI TCATGA 1 cut(s) 1776
BspLI GGNNCC 6 cut(s) 295, 514, 866, 1832, 2049, 2313
BspT107I GGYRCC 2 cut(s) 512, 1830
BspTNI GGTCTC 1 cut(s) 2317
BsrBI CCGCTC 1 cut(s) 377
BsrFI RCCGGY 1 cut(s) 1144
BsrI ACTGG 5 cut(s) 697, 1266, 1484, 2023, 2192
BssAI RCCGGY 1 cut(s) 1144
BssECI CCNNGG 5 cut(s) 114, 762, 961, 1493, 1851
BssT1I CCWWGG 4 cut(s) 114, 762, 961, 1851
Bst2UI CCWGG 1 cut(s) 1494
Bst4CI ACNGT 1 cut(s) 2365
Bst6I CTCTTC 2 cut(s) 1089, 1248
BstC8I GCNNGC 4 cut(s) 323, 366, 1166, 1798
BstDEI CTNAG 7 cut(s) 378, 1019, 1152, 1385, 1647, 2082, 2321
BstDSI CCRYGG 1 cut(s) 762
BstF5I GGATG 4 cut(s) 516, 1031, 1503, 2390
BstMAI GTCTC 4 cut(s) 1067, 1127, 2317, 2377
BstMWI GCNNNNNNNGC 4 cut(s) 374, 398, 1828, 2189
BstNI CCWGG 1 cut(s) 1494
BstNSI RCATGY 2 cut(s) 933, 1331
BstSCI CCNGG 2 cut(s) 1394, 1492
BstSFI CTRYAG 1 cut(s) 65
BstV1I GCAGC 3 cut(s) 410, 1905, 1908
BstV2I GAAGAC 1 cut(s) 2000
BstX2I RGATCY 4 cut(s) 293, 1619, 2311, 2386
BstYI RGATCY 4 cut(s) 293, 1619, 2311, 2386
BsuI GTATCC 1 cut(s) 983
BsuRI GGCC 7 cut(s) 158, 321, 472, 967, 1064, 1117, 1822
BtgI CCRYGG 1 cut(s) 762
BtsCI GGATG 4 cut(s) 516, 1031, 1503, 2390
BtsI GCAGTG 4 cut(s) 129, 852, 976, 2256
BtsIMutI CAGTG 6 cut(s) 129, 852, 976, 1383, 2256, 2318
Cac8I GCNNGC 4 cut(s) 323, 366, 1166, 1798
CciI TCATGA 1 cut(s) 1776
Cfr10I RCCGGY 1 cut(s) 1144
Cfr13I GGNCC 4 cut(s) 156, 864, 965, 1999
CseI GACGC 1 cut(s) 1593
Csp6I GTAC 7 cut(s) 11, 305, 740, 811, 1418, 1857, 2278
CviAII CATG 9 cut(s) 403, 565, 763, 930, 956, 1328, 1777, 1883, 2255
CviQI GTAC 7 cut(s) 11, 305, 740, 811, 1418, 1857, 2278
DdeI CTNAG 7 cut(s) 378, 1019, 1152, 1385, 1647, 2082, 2321
EaeI YGGCCR 1 cut(s) 319
Eam1104I CTCTTC 2 cut(s) 1089, 1248
EarI CTCTTC 2 cut(s) 1089, 1248
Ecl136II GAGCTC 1 cut(s) 1018
Eco130I CCWWGG 4 cut(s) 114, 762, 961, 1851
Eco24I GRGCYC 3 cut(s) 122, 1020, 1872
Eco31I GGTCTC 1 cut(s) 2317
Eco32I GATATC 2 cut(s) 671, 2260
Eco47I GGWCC 2 cut(s) 864, 1999
Eco53kI GAGCTC 1 cut(s) 1018
Eco57I CTGAAG 1 cut(s) 870
EcoICRI GAGCTC 1 cut(s) 1018
EcoRI GAATTC 2 cut(s) 173, 1758
EcoRII CCWGG 1 cut(s) 1492
EcoRV GATATC 2 cut(s) 671, 2260
EcoT14I CCWWGG 4 cut(s) 114, 762, 961, 1851
EcoT38I GRGCYC 3 cut(s) 122, 1020, 1872
ErhI CCWWGG 4 cut(s) 114, 762, 961, 1851
Esp3I CGTCTC 1 cut(s) 1127
FaeI CATG 9 cut(s) 406, 568, 766, 933, 959, 1331, 1780, 1886, 2258
FalI AAGNNNNNCTT 2 cut(s) 291, 323
FaqI GGGAC 2 cut(s) 850, 1232
FatI CATG 9 cut(s) 402, 564, 762, 929, 955, 1327, 1776, 1882, 2254
FauNDI CATATG 2 cut(s) 1519, 2194
FblI GTMKAC 2 cut(s) 819, 1767
Fnu4HI GCNGC 4 cut(s) 399, 1062, 1894, 1897
FokI GGATG 4 cut(s) 503, 1038, 1510, 2377
FriOI GRGCYC 3 cut(s) 122, 1020, 1872
Fsp4HI GCNGC 4 cut(s) 399, 1062, 1894, 1897
FspBI CTAG 9 cut(s) 218, 281, 468, 1178, 1730, 1793, 1940, 2034, 2180
GluI GCNGC 4 cut(s) 399, 1062, 1894, 1897
GsuI CTGGAG 1 cut(s) 714
HaeIII GGCC 7 cut(s) 158, 321, 472, 967, 1064, 1117, 1822
HapII CCGG 4 cut(s) 1070, 1145, 1395, 1443
HgaI GACGC 1 cut(s) 1593
Hin1II CATG 9 cut(s) 406, 568, 766, 933, 959, 1331, 1780, 1886, 2258
HincII GTYRAC 1 cut(s) 953
HindII GTYRAC 1 cut(s) 953
HindIII AAGCTT 1 cut(s) 1798
HinfI GANTC 9 cut(s) 371, 499, 561, 623, 1734, 1814, 1946, 2005, 2022
HpaII CCGG 4 cut(s) 1070, 1145, 1395, 1443
HphI GGTGA 2 cut(s) 20, 1059
Hpy166II GTNNAC 6 cut(s) 570, 820, 953, 1140, 1768, 2095
Hpy188III TCNNGA 7 cut(s) 788, 1338, 1384, 1456, 1777, 2051, 2263
Hpy8I GTNNAC 6 cut(s) 570, 820, 953, 1140, 1768, 2095
HpyAV CCTTC 9 cut(s) 41, 886, 894, 1006, 1248, 1335, 1344, 1833, 2351
HpyCH4III ACNGT 1 cut(s) 2365
HpyCH4IV ACGT 1 cut(s) 1136
HpyF10VI GCNNNNNNNGC 4 cut(s) 374, 398, 1828, 2189
HpyF3I CTNAG 7 cut(s) 378, 1019, 1152, 1385, 1647, 2082, 2321
HpySE526I ACGT 1 cut(s) 1136
Hsp92II CATG 9 cut(s) 406, 568, 766, 933, 959, 1331, 1780, 1886, 2258
LmnI GCTCC 7 cut(s) 532, 695, 1386, 1397, 1525, 1750, 2053
Lsp1109I GCAGC 3 cut(s) 410, 1905, 1908
LweI GCATC 5 cut(s) 1016, 1048, 1089, 2230, 2340
MaeI CTAG 9 cut(s) 218, 281, 468, 1178, 1730, 1793, 1940, 2034, 2180
MaeII ACGT 1 cut(s) 1136
MaeIII GTNAC 6 cut(s) 343, 781, 1147, 1913, 2112, 2316
MbiI CCGCTC 1 cut(s) 377
MfeI CAATTG 2 cut(s) 87, 1692
MflI RGATCY 4 cut(s) 293, 1619, 2311, 2386
MhlI GDGCHC 5 cut(s) 122, 1020, 1383, 1755, 1872
MlsI TGGCCA 1 cut(s) 321
MluNI TGGCCA 1 cut(s) 321
MlyI GAGTC 4 cut(s) 493, 1823, 1940, 1999
MmeI TCCRAC 2 cut(s) 1351, 1647
Mox20I TGGCCA 1 cut(s) 321
MscI TGGCCA 1 cut(s) 321
MseI TTAA 4 cut(s) 231, 309, 1551, 1920
MslI CAYNNNNRTG 3 cut(s) 896, 2296, 2348
Msp20I TGGCCA 1 cut(s) 321
MspI CCGG 4 cut(s) 1070, 1145, 1395, 1443
MspR9I CCNGG 2 cut(s) 1396, 1494
MunI CAATTG 2 cut(s) 87, 1692
Mva1269I GAATGC 1 cut(s) 2291
MvaI CCWGG 1 cut(s) 1494
MwoI GCNNNNNNNGC 4 cut(s) 374, 398, 1828, 2189
NciI CCSGG 1 cut(s) 1396
NcoI CCATGG 1 cut(s) 762
NdeI CATATG 2 cut(s) 1519, 2194
NlaIII CATG 9 cut(s) 406, 568, 766, 933, 959, 1331, 1780, 1886, 2258
NlaIV GGNNCC 6 cut(s) 295, 514, 866, 1832, 2049, 2313
NmeAIII GCCGAG 1 cut(s) 1848
NmuCI GTSAC 3 cut(s) 343, 1913, 2316
NspI RCATGY 2 cut(s) 933, 1331
PagI TCATGA 1 cut(s) 1776
PctI GAATGC 1 cut(s) 2291
PfeI GAWTC 5 cut(s) 371, 561, 623, 1734, 2022
PkrI GCNGC 4 cut(s) 400, 1063, 1895, 1898
PleI GAGTC 4 cut(s) 493, 1822, 1940, 1999
PpsI GAGTC 4 cut(s) 493, 1822, 1940, 1999
PsiI TTATAA 1 cut(s) 102
Psp124BI GAGCTC 1 cut(s) 1020
Psp6I CCWGG 1 cut(s) 1492
PspGI CCWGG 1 cut(s) 1492
PspN4I GGNNCC 6 cut(s) 295, 514, 866, 1832, 2049, 2313
PspPI GGNCC 4 cut(s) 156, 864, 965, 1999
PsuI RGATCY 4 cut(s) 293, 1619, 2311, 2386
RsaI GTAC 7 cut(s) 12, 306, 741, 812, 1419, 1858, 2279
RsaNI GTAC 7 cut(s) 11, 305, 740, 811, 1418, 1857, 2278
RseI CAYNNNNRTG 3 cut(s) 896, 2296, 2348
SacI GAGCTC 1 cut(s) 1020
SaqAI TTAA 4 cut(s) 231, 309, 1551, 1920
SatI GCNGC 4 cut(s) 399, 1062, 1894, 1897
Sau96I GGNCC 4 cut(s) 156, 864, 965, 1999
ScaI AGTACT 1 cut(s) 2279
SchI GAGTC 4 cut(s) 493, 1823, 1940, 1999
ScrFI CCNGG 2 cut(s) 1396, 1494
SduI GDGCHC 5 cut(s) 122, 1020, 1383, 1755, 1872
SfaNI GCATC 5 cut(s) 1016, 1048, 1089, 2230, 2340
SfcI CTRYAG 1 cut(s) 65
SinI GGWCC 2 cut(s) 864, 1999
SmiMI CAYNNNNRTG 3 cut(s) 896, 2296, 2348
SmlI CTYRAG 3 cut(s) 854, 2117, 2131
SmoI CTYRAG 3 cut(s) 854, 2117, 2131
SsiI CCGC 5 cut(s) 84, 375, 775, 921, 1061
SspI AATATT 1 cut(s) 2412
SspMI CTAG 9 cut(s) 218, 281, 468, 1178, 1730, 1793, 1940, 2034, 2180
SstI GAGCTC 1 cut(s) 1020
StyD4I CCNGG 2 cut(s) 1394, 1492
StyI CCWWGG 4 cut(s) 114, 762, 961, 1851
TaaI ACNGT 1 cut(s) 2365
TaiI ACGT 1 cut(s) 1139
TaqI TCGA 3 cut(s) 408, 2008, 2367
TatI WGTACW 4 cut(s) 10, 739, 1417, 2277
TauI GCSGC 1 cut(s) 1064
TfiI GAWTC 5 cut(s) 371, 561, 623, 1734, 2022
Tru1I TTAA 4 cut(s) 231, 309, 1551, 1920
Tru9I TTAA 4 cut(s) 231, 309, 1551, 1920
TscAI CASTG 6 cut(s) 136, 852, 983, 1383, 2256, 2325
TseFI GTSAC 3 cut(s) 343, 1913, 2316
TseI GCWGC 3 cut(s) 398, 1893, 1896
Tsp45I GTSAC 3 cut(s) 343, 1913, 2316
TspDTI ATGAA 5 cut(s) 553, 868, 988, 1514, 1765
TspGWI ACGGA 4 cut(s) 735, 1266, 2012, 2304
TspRI CASTG 6 cut(s) 136, 852, 983, 1383, 2256, 2325
VpaK11BI GGWCC 2 cut(s) 864, 1999
XapI RAATTY 5 cut(s) 173, 418, 439, 1758, 2266
XceI RCATGY 2 cut(s) 933, 1331
XcmI CCANNNNNNNNNTGG 1 cut(s) 983
XmiI GTMKAC 2 cut(s) 819, 1767
XspI CTAG 9 cut(s) 218, 281, 468, 1178, 1730, 1793, 1940, 2034, 2180
ZrmI AGTACT 1 cut(s) 2279
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.