Rmu_sc0002187.1_g000023

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002187.1
Physical Location & Seq
Reverse (-)
78677 .. 82087
3411 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002187.1_g000023.1.cds

Sequence Viewer

Length: 1272 bp
atggaagagaagaaacctctctcacattgtggtttctccgatcaaataaagaacgtaactttgggtttctcactttctctgaactctgaacaaacccaggaggcaactagtgacagtaatgaaatacctattaagcccttttttgattgggctggacgggtcatcttcaatcaatccggctctatttacctcacagcacagaacggaatcatacttggttgggtctctgtagaaaaagttcagacacaagacaactaccagagagcaactcttgactatgatggagttttgaggcactatatccaccagaaaagcactgattcttggtccacttttaccttcatacctccaaacatttgcacagaaattgtggaatatacaggtggtggtgcatgtgggtttaacagtttatgtatacatgatgagggcgcagcacataataaatgcttatgccctccgagtaacatccctgttgaccgagatgatgagaggaaagggtgcacgcaaaactttgttccccaaagttgtgataaagcctcatcagaaatagacctctttgaatttcaagagcttccactcaccgattggcctggtggcgcagattatgagcatttccagccagttaataaggaacagtccaaccaaagctgcttagccgattgtttctgtgccattgccattttcaatgaagtaaatagtgattgttggaagaagggaatccctcttttaaacgggaggataaaaaaagatgttgaaggagtagctctggtgaaaataaggaaaggcactttgacaccagcaaaagaagaagacagtctaactctgctcatcatcgcagcagtgatcattttaatatcaaccaacttggttgtttttataataacccatctggttacctctcatgcgaaggtgaatcgacttaatcctgtggttcaaggcatgaatctgaaatgtttcactttcatggagctaaaagaagccaccaacggattcaaggaagagctaggtcgtggtgcttttgcaactgttttcaaaggagttctagcatctgataatgggaagttcattgctgtcaaaagattgaacgctgtggtcaaagaaaatgatttggaattcaaagctgaagtgagtgcaattggcggaacaaatcacagaaatttagtccaactactcggattttgtaacgaggggcaacaccagcttcttgtgtatgagtacatgagcaatggctctctagcaaccttcctcttcggagagtcaagaccaaactag

Protein Analysis

423

Amino Acids

46.85

Weight (kDa)

5.38

Isoelectric Point (pI)

36.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000299)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43401 FvH4_3g43402 FvH4_3g43403 FvH4_3g43440 FvH4_3g43710 FvH4_3g43772
malus_domestica MD03G1021800.v1.1 MD03G1022000.v1.1 MD11G1024500.v1.1 MD11G1024700.v1.1 MD11G1025200.v1.1 MD11G1025500.v1.1 MD11G1025600.v1.1 MD11G1026200.v1.1 MD11G1026400.v1.1 MD11G1026500.v1.1 MD11G1026600.v1.1 MD11G1026800.v1.1 MD11G1027300.v1.1
prunus_persica Prupe.6G020400_v2.0.a1 Prupe.6G020500_v2.0.a1 Prupe.6G020600_v2.0.a1 Prupe.6G020700_v2.0.a1 Prupe.6G020800_v2.0.a1 Prupe.6G020900_v2.0.a1 Prupe.6G021000_v2.0.a1 Prupe.6G021500_v2.0.a1 Prupe.6G021600_v2.0.a1
pyrus_communis pycom03g01850 pycom03g01870 pycom03g01900 pycom03g01910 pycom11g01950 pycom11g01980 pycom11g01990 pycom11g02030 pycom11g02040
rosa_chinensis RchiOBHm_Chr5g0077411 RchiOBHm_Chr5g0077421 RchiOBHm_Chr5g0077571 RchiOBHm_Chr5g0077601 RchiOBHm_Chr5g0077621 RchiOBHm_Chr5g0077651 RchiOBHm_Chr5g0077661 RchiOBHm_Chr5g0077671 RchiOBHm_Chr5g0077701 RchiOBHm_Chr5g0077741 RchiOBHm_Chr5g0077791 RchiOBHm_Chr5g0077861 RchiOBHm_Chr5g0078871 RchiOBHm_Chr5g0078901 RchiOBHm_Chr5g0078941 RchiOBHm_Chr5g0079081 RchiOBHm_Chr5g0079091 RchiOBHm_Chr7g0233481
rosa_laevigata RLG00000036694 RLG00000036704 RLG00000036705 RLG00000036710 RLG00000036713 RLG00000036714 RLG00000036716 RLG00000036793 RLG00000036796 RLG00000036804 RLG00000036806
rosa_multiflora Rmu_co8130992.1_g000001 Rmu_sc0000029.1_g000037 Rmu_sc0002187.1_g000023 Rmu_sc0004168.1_g000001 Rmu_sc0004168.1_g000004 Rmu_sc0004168.1_g000018 Rmu_sc0004168.1_g000028 Rmu_sc0004168.1_g000033 Rmu_sc0004168.1_g000056 Rmu_sc0004277.1_g000009 Rmu_sc0004277.1_g000016 Rmu_sc0004277.1_g000018 Rmu_sc0004277.1_g000020 Rmu_sc0004277.1_g000084 Rmu_sc0004277.1_g000087 Rmu_sc0012487.1_g000001 Rmu_sc0012487.1_g000002
rosa_roxburghii Rroxscaffold_1G00003760 Rroxscaffold_1G00003780 Rroxscaffold_1G00004370 Rroxscaffold_1G00004400 Rroxscaffold_1G00004490 Rroxscaffold_1G00004510 Rroxscaffold_3G00227260 Rroxscaffold_5G00366480
rosa_rugosa Rorug05G0454800 Rorug05G0455700 Rorug05G0455900 Rorug05G0456100 Rorug05G0456300 Rorug05G0456700.1 Rorug05G0461800 Rorug05G0462100 Rorug07G0280900.1 Rorug07G0281000
rosa_samantha Rh5CG562200 Rh5DG543500 Rh5DG544200 Rh5DG544400 Rh5DG544500 Rh5DG544600 Rh5DG544700 Rh5DG544900 Rh5DG545200 Rh5DG549700 Rh7DG426000
rosa_wichuraiana Rw0G003130 Rw0G023780 Rw0G023790 Rw5G046780 Rw5G047330 Rw5G047350 Rw5G047370 Rw5G047390 Rw5G047420 Rw7G036050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 878
AccI GTMKAC 1 cut(s) 415
AciI CCGC 1 cut(s) 1140
AcsI RAATTY 3 cut(s) 560, 1112, 1156
AcuI CTGAAG 1 cut(s) 1143
AdeI CACNNNGTG 1 cut(s) 29
AfaI GTAC 1 cut(s) 1217
AhlI ACTAGT 1 cut(s) 107
AjnI CCWGG 2 cut(s) 96, 589
AjuI GAANNNNNNNTTGG 2 cut(s) 44, 76
AluBI AGCT 7 cut(s) 571, 648, 764, 970, 1003, 1121, 1201
AluI AGCT 7 cut(s) 571, 648, 764, 970, 1003, 1121, 1201
Alw21I GWGCWC 1 cut(s) 503
Alw26I GTCTC 1 cut(s) 229
Alw44I GTGCAC 1 cut(s) 499
AoxI GGCC 1 cut(s) 587
ApaLI GTGCAC 1 cut(s) 499
ApeKI GCWGC 3 cut(s) 431, 648, 836
ApoI RAATTY 3 cut(s) 560, 1112, 1156
Asp700I GAANNNNTTC 2 cut(s) 237, 953
AspLEI GCGC 2 cut(s) 431, 599
AspS9I GGNCC 1 cut(s) 327
AsuHPI GGTGA 3 cut(s) 571, 781, 922
AvaII GGWCC 1 cut(s) 327
BaeGI GKGCMC 1 cut(s) 503
BbsI GAAGAC 1 cut(s) 816
Bbv12I GWGCWC 1 cut(s) 503
BbvI GCAGC 3 cut(s) 443, 635, 848
BccI CCATC 2 cut(s) 275, 894
BciT130I CCWGG 2 cut(s) 98, 591
BclI TGATCA 1 cut(s) 843
BcoDI GTCTC 1 cut(s) 229
BcuI ACTAGT 1 cut(s) 107
BfaI CTAG 5 cut(s) 108, 1004, 1043, 1235, 1270
BfmI CTRYAG 1 cut(s) 228
BisI GCNGC 3 cut(s) 432, 649, 837
BlpI GCTNAGC 1 cut(s) 652
BlsI GCNGC 3 cut(s) 433, 650, 838
Bme1390I CCNGG 2 cut(s) 98, 591
Bme18I GGWCC 1 cut(s) 327
BmgT120I GGNCC 1 cut(s) 327
BmrFI CCNGG 2 cut(s) 98, 591
BmsI GCATC 1 cut(s) 1055
BpiI GAAGAC 1 cut(s) 816
BplI GAGNNNNNCTC 2 cut(s) 253, 285
Bpu1102I GCTNAGC 1 cut(s) 652
BsaI GGTCTC 1 cut(s) 229
BsaJI CCNNGG 1 cut(s) 96
Bse1I ACTGG 1 cut(s) 620
Bse3DI GCAATG 3 cut(s) 672, 1065, 1231
BseBI CCWGG 2 cut(s) 98, 591
BseDI CCNNGG 1 cut(s) 96
BseGI GGATG 1 cut(s) 465
BseMI GCAATG 3 cut(s) 672, 1065, 1231
BseNI ACTGG 1 cut(s) 620
BseSI GKGCMC 1 cut(s) 503
BseXI GCAGC 3 cut(s) 443, 635, 848
BshFI GGCC 1 cut(s) 589
BsiHKAI GWGCWC 1 cut(s) 503
BsiSI CCGG 1 cut(s) 177
BsmAI GTCTC 1 cut(s) 229
BsnI GGCC 1 cut(s) 589
Bso31I GGTCTC 1 cut(s) 229
Bsp1286I GDGCHC 1 cut(s) 503
Bsp143I GATC 2 cut(s) 40, 843
Bsp1720I GCTNAGC 1 cut(s) 652
BspACI CCGC 1 cut(s) 1140
BspANI GGCC 1 cut(s) 589
BspQI GCTCTTC 1 cut(s) 993
BspTNI GGTCTC 1 cut(s) 229
BsrDI GCAATG 3 cut(s) 672, 1065, 1231
BsrI ACTGG 1 cut(s) 620
BssECI CCNNGG 1 cut(s) 96
BssMI GATC 2 cut(s) 40, 843
BssNAI GTATAC 1 cut(s) 416
Bst1107I GTATAC 1 cut(s) 416
Bst2UI CCWGG 2 cut(s) 98, 591
Bst4CI ACNGT 5 cut(s) 116, 407, 636, 815, 1027
Bst6I CTCTTC 2 cut(s) 993, 1253
BstC8I GCNNGC 1 cut(s) 503
BstDEI CTNAG 1 cut(s) 652
BstEII GGTNACC 1 cut(s) 892
BstF5I GGATG 1 cut(s) 465
BstHHI GCGC 2 cut(s) 431, 599
BstKTI GATC 2 cut(s) 43, 846
BstMAI GTCTC 1 cut(s) 229
BstMBI GATC 2 cut(s) 40, 843
BstMWI GCNNNNNNNGC 2 cut(s) 616, 1198
BstNI CCWGG 2 cut(s) 98, 591
BstNSI RCATGY 1 cut(s) 396
BstPI GGTNACC 1 cut(s) 892
BstSCI CCNGG 2 cut(s) 96, 589
BstSFI CTRYAG 1 cut(s) 228
BstSLI GKGCMC 1 cut(s) 503
BstV1I GCAGC 3 cut(s) 443, 635, 848
BstV2I GAAGAC 1 cut(s) 816
BstZ17I GTATAC 1 cut(s) 416
BsuRI GGCC 1 cut(s) 589
BtgZI GCGATG 1 cut(s) 817
BtsCI GGATG 1 cut(s) 465
BtsI GCAGTG 1 cut(s) 846
BtsIMutI CAGTG 2 cut(s) 315, 846
Cac8I GCNNGC 1 cut(s) 503
CfoI GCGC 2 cut(s) 431, 599
Cfr13I GGNCC 1 cut(s) 327
Csp6I GTAC 1 cut(s) 1216
CviAII CATG 6 cut(s) 393, 419, 902, 940, 964, 1219
CviQI GTAC 1 cut(s) 1216
DdeI CTNAG 1 cut(s) 652
DpnI GATC 2 cut(s) 42, 845
DpnII GATC 2 cut(s) 40, 843
DraI TTTAAA 1 cut(s) 729
DraIII CACNNNGTG 1 cut(s) 29
Eam1104I CTCTTC 2 cut(s) 993, 1253
EarI CTCTTC 2 cut(s) 993, 1253
EciI GGCGGA 1 cut(s) 1155
Eco31I GGTCTC 1 cut(s) 229
Eco47I GGWCC 1 cut(s) 327
Eco57I CTGAAG 1 cut(s) 1143
Eco91I GGTNACC 1 cut(s) 892
EcoO65I GGTNACC 1 cut(s) 892
EcoRI GAATTC 1 cut(s) 1112
EcoRII CCWGG 2 cut(s) 96, 589
FaeI CATG 6 cut(s) 396, 422, 905, 943, 967, 1222
FatI CATG 6 cut(s) 392, 418, 901, 939, 963, 1218
FbaI TGATCA 1 cut(s) 843
FblI GTMKAC 1 cut(s) 415
Fnu4HI GCNGC 3 cut(s) 432, 649, 837
FokI GGATG 1 cut(s) 452
Fsp4HI GCNGC 3 cut(s) 432, 649, 837
FspBI CTAG 5 cut(s) 108, 1004, 1043, 1235, 1270
GlaI GCGC 2 cut(s) 430, 598
GluI GCNGC 3 cut(s) 432, 649, 837
HaeIII GGCC 1 cut(s) 589
HapII CCGG 1 cut(s) 177
HhaI GCGC 2 cut(s) 431, 599
Hin1II CATG 6 cut(s) 396, 422, 905, 943, 967, 1222
Hin6I GCGC 2 cut(s) 429, 597
HinP1I GCGC 2 cut(s) 429, 597
HincII GTYRAC 1 cut(s) 475
HindII GTYRAC 1 cut(s) 475
HinfI GANTC 7 cut(s) 207, 320, 717, 913, 943, 990, 1256
HpaII CCGG 1 cut(s) 177
HphI GGTGA 3 cut(s) 571, 781, 922
Hpy166II GTNNAC 4 cut(s) 330, 416, 475, 501
Hpy188III TCNNGA 3 cut(s) 272, 566, 1260
Hpy8I GTNNAC 4 cut(s) 330, 416, 475, 501
HpyAV CCTTC 5 cut(s) 349, 706, 749, 901, 1252
HpyCH4III ACNGT 5 cut(s) 116, 407, 636, 815, 1027
HpyCH4IV ACGT 1 cut(s) 54
HpyCH4V TGCA 5 cut(s) 360, 392, 501, 1022, 1133
HpyF10VI GCNNNNNNNGC 2 cut(s) 616, 1198
HpyF3I CTNAG 1 cut(s) 652
HpySE526I ACGT 1 cut(s) 54
Hsp92II CATG 6 cut(s) 396, 422, 905, 943, 967, 1222
HspAI GCGC 2 cut(s) 429, 597
Ksp22I TGATCA 1 cut(s) 843
Kzo9I GATC 2 cut(s) 40, 843
LguI GCTCTTC 1 cut(s) 993
LmnI GCTCC 1 cut(s) 967
Lsp1109I GCAGC 3 cut(s) 443, 635, 848
LweI GCATC 1 cut(s) 1055
MaeI CTAG 5 cut(s) 108, 1004, 1043, 1235, 1270
MaeII ACGT 1 cut(s) 54
MaeIII GTNAC 5 cut(s) 55, 110, 461, 892, 1181
MalI GATC 2 cut(s) 42, 845
MboI GATC 2 cut(s) 40, 843
MboII GAAGA 8 cut(s) 17, 22, 157, 721, 818, 821, 1010, 1240
MfeI CAATTG 1 cut(s) 1134
MhlI GDGCHC 1 cut(s) 503
MluCI AATT 5 cut(s) 366, 560, 1112, 1134, 1156
MlyI GAGTC 1 cut(s) 1265
MmeI TCCRAC 3 cut(s) 663, 686, 1189
MroXI GAANNNNTTC 2 cut(s) 237, 953
MseI TTAA 6 cut(s) 132, 402, 624, 728, 851, 921
MslI CAYNNNNRTG 1 cut(s) 962
MspI CCGG 1 cut(s) 177
MspR9I CCNGG 2 cut(s) 98, 591
MunI CAATTG 1 cut(s) 1134
MvaI CCWGG 2 cut(s) 98, 591
MwoI GCNNNNNNNGC 2 cut(s) 616, 1198
NdeII GATC 2 cut(s) 40, 843
NlaIII CATG 6 cut(s) 396, 422, 905, 943, 967, 1222
NmuCI GTSAC 1 cut(s) 110
NspI RCATGY 1 cut(s) 396
PciSI GCTCTTC 1 cut(s) 993
PdmI GAANNNNTTC 2 cut(s) 237, 953
PfeI GAWTC 6 cut(s) 207, 320, 717, 913, 943, 990
PkrI GCNGC 3 cut(s) 433, 650, 838
PleI GAGTC 1 cut(s) 1264
PpsI GAGTC 1 cut(s) 1264
PsiI TTATAA 1 cut(s) 878
Psp6I CCWGG 2 cut(s) 96, 589
PspEI GGTNACC 1 cut(s) 892
PspGI CCWGG 2 cut(s) 96, 589
PspPI GGNCC 1 cut(s) 327
PsrI GAACNNNNNNTAC 2 cut(s) 222, 254
RsaI GTAC 1 cut(s) 1217
RsaNI GTAC 1 cut(s) 1216
RseI CAYNNNNRTG 1 cut(s) 962
SapI GCTCTTC 1 cut(s) 993
SaqAI TTAA 6 cut(s) 132, 402, 624, 728, 851, 921
SatI GCNGC 3 cut(s) 432, 649, 837
Sau3AI GATC 2 cut(s) 40, 843
Sau96I GGNCC 1 cut(s) 327
SchI GAGTC 1 cut(s) 1265
ScrFI CCNGG 2 cut(s) 98, 591
SduI GDGCHC 1 cut(s) 503
SfaNI GCATC 1 cut(s) 1055
SfcI CTRYAG 1 cut(s) 228
SinI GGWCC 1 cut(s) 327
SmiMI CAYNNNNRTG 1 cut(s) 962
SpeI ACTAGT 1 cut(s) 107
Sse9I AATT 5 cut(s) 366, 560, 1112, 1134, 1156
SsiI CCGC 1 cut(s) 1140
SspMI CTAG 5 cut(s) 108, 1004, 1043, 1235, 1270
StyD4I CCNGG 2 cut(s) 96, 589
TaaI ACNGT 5 cut(s) 116, 407, 636, 815, 1027
TaiI ACGT 1 cut(s) 57
TaqI TCGA 1 cut(s) 916
TaqII GACCGA 1 cut(s) 492
TasI AATT 5 cut(s) 366, 560, 1112, 1134, 1156
TatI WGTACW 1 cut(s) 1215
TfiI GAWTC 6 cut(s) 207, 320, 717, 913, 943, 990
Tru1I TTAA 6 cut(s) 132, 402, 624, 728, 851, 921
Tru9I TTAA 6 cut(s) 132, 402, 624, 728, 851, 921
TscAI CASTG 2 cut(s) 322, 846
TseFI GTSAC 1 cut(s) 110
TseI GCWGC 3 cut(s) 431, 648, 836
Tsp45I GTSAC 1 cut(s) 110
TspDTI ATGAA 6 cut(s) 135, 331, 702, 952, 956, 1054
TspGWI ACGGA 2 cut(s) 219, 1002
TspRI CASTG 2 cut(s) 322, 846
VneI GTGCAC 1 cut(s) 499
VpaK11BI GGWCC 1 cut(s) 327
XapI RAATTY 3 cut(s) 560, 1112, 1156
XceI RCATGY 1 cut(s) 396
XcmI CCANNNNNNNNNTGG 1 cut(s) 582
XmiI GTMKAC 1 cut(s) 415
XmnI GAANNNNTTC 2 cut(s) 237, 953
XspI CTAG 5 cut(s) 108, 1004, 1043, 1235, 1270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.