RchiOBHm_Chr5g0077421

Bulb-type mannose-specific lectin

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
83341804 .. 83344269
2466 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ35199

Sequence Viewer

Length: 2466 bp
ATGATTGCATTCTGTATATCACCATTGACACTTCCATACTTTCATACCATGGCTTCTATACTGCTACCATATCCTTTTTACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACAGCTACTCCCAATTTCCGCAGTTGCTCAAACTTATAAGAACATATCCTTGGGCTCATCACTCACTGCACTTGACAATAACTCTTTCTGGGCCTCGCCATCGGGGGAATTCGCTTTCGGTTTCCAAGAAGTTAGTAGTAATGGCTTCTTACTAGCCATTTGGTTTAACAAAATAGCTGAAAGGACTATTGTATGGTCAGCCAATGCCAACAATCTACTGCAGAAGGGATCAAAAGTGGTACTAAATGCAGATGGCCAGCTTTTACTCAATGATGCTGCGACAAGCAAACAATTACTGCTTGCTGATTCAGTAGGGAGGGAAGTAGCCTATGCAGCCATGCTCGACACAGGAAATTTCGTGTTGGCTAATCAAAATTCAATGTATTTGTGGGAGAGTTTTACTAGGCCAACAAATACACTTCTACCCACGCAGACTCTAAATCAAGGCACCATCCTCTTTGCTCCCACAACAGCAACAAATTACTCCAAAGGAAGATTCATGTTTACACTACAAGATGATGGAAATCTCCTGCTTTACACAACACATTACCCATCGGATACTGCTAATTTTCCTTATTGGTCAACACAAAGTATGGAGATCGGATATCAAGTCATCTTCAACCAGACTGGAGCTATTTACCTTACTAGCAAGAACGGAAGCATACTTACTGCTGTTCTAAACAATACAGCTTCAACCATGGAGTTCTACCACAGAGTAACTCTTGACTATGATGGAGTGTTGAGGTACTATGTCTACCCTAAAAGCACTGGCACAAGTGGACACTGGATCACGGCCTGGTCCACTTTGTCCATCATACCTCCAAACATCTGTGTGAGCATTTCACAAGATAAAGGCGGTGGTGCATGTGGTTTCAACGGCTTATGTCAACATGACCAAGGGCCAAGTTGCCAGTGCCCAGTTGGTTATAGCTTCATTGATCCTAATGATGAGCTCAGAGGATGCAAGCAGAACTTCGTGCAACAAAGCTGTGATGGGACCTCACCAGAGACTGATCTTTTCTATTTCGAAGAGATGCAAAACACAGCATGGCCTCAATCTGATTATGAGAAGTTTACGCCGGTAACTGAGGATTGGTGCAGGCAGACTTGCCTAGCTGATTGTTTCTGTGCAGTAGCTAATTTCAGAAACGGGGACTGCTGGATCAAGTCAATACCTCTTCGCAACGGAAGGATTGACCCCAGTAATGGTGCAAAAGCTCTAATCAAAATAAGGAGAGGTAATTCTACTTTGAAACCTGAACATGCACATTCAAGAAGGAAAAATCGTTCAACTCTGATCCTTGTCGGATCAGTGCTCCTGAGTAGCTCCGGGTTTCTAAACTTTCTCCTAGTACTGATAACTTATATGGTTGTTTCTGGTTTCTATTTTAAGAAAGGAAAGGTGGTTCAACCATACTCAGTCATACCAGGGATGAACCTAATATGTTTCACTTACGAGGAGCTAAATAAGGCTACGAATGAATTTAAGGAAGAACTTGGTCGTGGTGCTTTTGCAACAGTTTTTAGAGGAGATTTAGAGTCTGATAATGGGAGATCTGTTGCTGTCAAAAGATTGAACACTACGGTAAAAGAAAGTGAGTTGGAGTTCAAAGCTGAATTGAGTGCAATTGGCAGAACAAATCACAGAAACTTGGTACAGCTAATAGGATTCTGCAACGAGGGGGAGCACCGAATTCTTGTCTATGAGTTCATGAGCAACGGCTCTCTAGCAAGCTTCCTCTTTGGAGAGTCAAGGCCGAGCTGGCACCAAAGAAGGCAAATTGCCTTGGGTACAGCAAGAGGGCTCTTGTATTTGCATGAGGAGTGCAGCAGCCAAATCATACATTGTGACATTAAGCCTCAAAATGTTCTCCTAGATGACTCTTTCACAGCAAGGATTTCTGACTTTGGATTAGCCAAGCTTTTGAAGACGGACCAGACTCGAACTACTACTGGAATCAGGGGAACTAAAGGGTATGTGGCTCCTGAATGGTTCAAAAATATGCCTATCACAACTAAGGTTGATGTTTACAGCTACGGGATTTTGTTACTTGAGATCATTTGCTTGAGGAAGTATTTTGAGGCAGAGGCAGAGGATGAAGATCAAATGATACTAGCTGACTGGGCATATGACTGCTATGTGGAAAAGAAACTGCATCTGCTATTTGACAATGACGATGAGGCAGTGCATGATATCAAGAATTTGGAGAAGTACTTGATGATCGCATTCTGGTGCATCCAGGAGGATCCGTCACTGAGACCCACAACGAAGAAACTCACATTGATGCTTGAAGGAACTGTTGACGTCTCAATTCCACCTGATCCATCCTCATTTGCAAGTTCAATATTGTAA

Protein Analysis

821

Amino Acids

92.02

Weight (kDa)

5.71

Isoelectric Point (pI)

34.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 100 - 185 2e-13 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 532 - 797 4e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 533 - 797 1.2e-50 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000299)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43401 FvH4_3g43402 FvH4_3g43403 FvH4_3g43440 FvH4_3g43710 FvH4_3g43772
malus_domestica MD03G1021800.v1.1 MD03G1022000.v1.1 MD11G1024500.v1.1 MD11G1024700.v1.1 MD11G1025200.v1.1 MD11G1025500.v1.1 MD11G1025600.v1.1 MD11G1026200.v1.1 MD11G1026400.v1.1 MD11G1026500.v1.1 MD11G1026600.v1.1 MD11G1026800.v1.1 MD11G1027300.v1.1
prunus_persica Prupe.6G020400_v2.0.a1 Prupe.6G020500_v2.0.a1 Prupe.6G020600_v2.0.a1 Prupe.6G020700_v2.0.a1 Prupe.6G020800_v2.0.a1 Prupe.6G020900_v2.0.a1 Prupe.6G021000_v2.0.a1 Prupe.6G021500_v2.0.a1 Prupe.6G021600_v2.0.a1
pyrus_communis pycom03g01850 pycom03g01870 pycom03g01900 pycom03g01910 pycom11g01950 pycom11g01980 pycom11g01990 pycom11g02030 pycom11g02040
rosa_chinensis RchiOBHm_Chr5g0077411 RchiOBHm_Chr5g0077421 RchiOBHm_Chr5g0077571 RchiOBHm_Chr5g0077601 RchiOBHm_Chr5g0077621 RchiOBHm_Chr5g0077651 RchiOBHm_Chr5g0077661 RchiOBHm_Chr5g0077671 RchiOBHm_Chr5g0077701 RchiOBHm_Chr5g0077741 RchiOBHm_Chr5g0077791 RchiOBHm_Chr5g0077861 RchiOBHm_Chr5g0078871 RchiOBHm_Chr5g0078901 RchiOBHm_Chr5g0078941 RchiOBHm_Chr5g0079081 RchiOBHm_Chr5g0079091 RchiOBHm_Chr7g0233481
rosa_laevigata RLG00000036694 RLG00000036704 RLG00000036705 RLG00000036710 RLG00000036713 RLG00000036714 RLG00000036716 RLG00000036793 RLG00000036796 RLG00000036804 RLG00000036806
rosa_multiflora Rmu_co8130992.1_g000001 Rmu_sc0000029.1_g000037 Rmu_sc0002187.1_g000023 Rmu_sc0004168.1_g000001 Rmu_sc0004168.1_g000004 Rmu_sc0004168.1_g000018 Rmu_sc0004168.1_g000028 Rmu_sc0004168.1_g000033 Rmu_sc0004168.1_g000056 Rmu_sc0004277.1_g000009 Rmu_sc0004277.1_g000016 Rmu_sc0004277.1_g000018 Rmu_sc0004277.1_g000020 Rmu_sc0004277.1_g000084 Rmu_sc0004277.1_g000087 Rmu_sc0012487.1_g000001 Rmu_sc0012487.1_g000002
rosa_roxburghii Rroxscaffold_1G00003760 Rroxscaffold_1G00003780 Rroxscaffold_1G00004370 Rroxscaffold_1G00004400 Rroxscaffold_1G00004490 Rroxscaffold_1G00004510 Rroxscaffold_3G00227260 Rroxscaffold_5G00366480
rosa_rugosa Rorug05G0454800 Rorug05G0455700 Rorug05G0455900 Rorug05G0456100 Rorug05G0456300 Rorug05G0456700.1 Rorug05G0461800 Rorug05G0462100 Rorug07G0280900.1 Rorug07G0281000
rosa_samantha Rh5CG562200 Rh5DG543500 Rh5DG544200 Rh5DG544400 Rh5DG544500 Rh5DG544600 Rh5DG544700 Rh5DG544900 Rh5DG545200 Rh5DG549700 Rh7DG426000
rosa_wichuraiana Rw0G003130 Rw0G023780 Rw0G023790 Rw5G046780 Rw5G047330 Rw5G047350 Rw5G047370 Rw5G047390 Rw5G047420 Rw7G036050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 150
AatII GACGTC 1 cut(s) 2421
AccB1I GGYRCC 2 cut(s) 560, 1878
AccI GTMKAC 1 cut(s) 867
AciI CCGC 2 cut(s) 132, 969
AclWI GGATC 9 cut(s) 349, 908, 1046, 1283, 1405, 1429, 2354, 2367, 2429
AcoI YGGCCR 1 cut(s) 367
AcsI RAATTY 6 cut(s) 221, 466, 487, 1595, 1806, 2314
AcyI GRCGYC 1 cut(s) 2418
AfaI GTAC 6 cut(s) 354, 860, 1467, 1770, 1906, 2327
AfiI CCNNNNNNNGG 1 cut(s) 1319
AjnI CCWGG 3 cut(s) 908, 1540, 2352
AjuI GAANNNNNNNTTGG 4 cut(s) 146, 178, 593, 625
AloI GAACNNNNNNTCC 4 cut(s) 1384, 1416, 1503, 1535
Alw21I GWGCWC 3 cut(s) 1068, 1431, 1803
Alw26I GTCTC 3 cut(s) 1115, 2365, 2425
AlwI GGATC 9 cut(s) 349, 908, 1046, 1283, 1405, 1429, 2354, 2367, 2429
AlwNI CAGNNNCTG 1 cut(s) 1124
AoxI GGCC 7 cut(s) 204, 367, 518, 906, 1013, 1163, 1868
ApeKI GCWGC 4 cut(s) 389, 446, 1941, 1944
ApoI RAATTY 6 cut(s) 221, 466, 487, 1595, 1806, 2314
AspS9I GGNCC 5 cut(s) 204, 912, 1013, 1110, 2047
AsuC2I CCSGG 1 cut(s) 1444
AsuHPI GGTGA 2 cut(s) 12, 1107
AsuII TTCGAA 1 cut(s) 1140
AvaII GGWCC 3 cut(s) 912, 1110, 2047
BaeGI GKGCMC 1 cut(s) 1031
BalI TGGCCA 1 cut(s) 369
BamHI GGATCC 1 cut(s) 2359
BanI GGYRCC 2 cut(s) 560, 1878
BanII GRGCYC 3 cut(s) 170, 1068, 1920
BarI GAAGNNNNNNTAC 2 cut(s) 763, 795
BbsI GAAGAC 1 cut(s) 2048
Bbv12I GWGCWC 3 cut(s) 1068, 1431, 1803
BbvI GCAGC 4 cut(s) 376, 458, 1953, 1956
BccI CCATC 9 cut(s) 220, 359, 572, 626, 673, 839, 932, 1100, 2446
BceAI ACGGC 3 cut(s) 921, 1006, 1849
BciT130I CCWGG 3 cut(s) 910, 1542, 2354
BciVI GTATCC 1 cut(s) 664
BcnI CCSGG 1 cut(s) 1444
BcoDI GTCTC 3 cut(s) 1115, 2365, 2425
BfaI CTAG 8 cut(s) 266, 516, 759, 1226, 1463, 1841, 1988, 2228
BfmI CTRYAG 2 cut(s) 113, 332
BfuI GTATCC 1 cut(s) 664
BglI GCCNNNNNGGC 1 cut(s) 1876
BglII AGATCT 1 cut(s) 1667
BisI GCNGC 4 cut(s) 390, 447, 1942, 1945
BlsI GCNGC 4 cut(s) 391, 448, 1943, 1946
BmcAI AGTACT 2 cut(s) 1467, 2327
Bme1390I CCNGG 4 cut(s) 910, 1444, 1542, 2354
Bme18I GGWCC 3 cut(s) 912, 1110, 2047
BmgT120I GGNCC 5 cut(s) 204, 912, 1013, 1110, 2047
BmiI GGNNCC 5 cut(s) 562, 1111, 1880, 2097, 2361
BmrFI CCNGG 4 cut(s) 910, 1444, 1542, 2354
BmrI ACTGGG 3 cut(s) 1025, 1308, 2245
BmsI GCATC 6 cut(s) 376, 1064, 1137, 2278, 2358, 2388
BmuI ACTGGG 3 cut(s) 1025, 1308, 2245
BpiI GAAGAC 1 cut(s) 2048
BpmI CTGGAG 1 cut(s) 762
Bpu14I TTCGAA 1 cut(s) 1140
BpuEI CTTGAG 2 cut(s) 2186, 2200
BpuMI CCSGG 1 cut(s) 1444
BsaBI GATNNNNATC 2 cut(s) 636, 2214
BsaHI GRCGYC 1 cut(s) 2418
BsaI GGTCTC 1 cut(s) 2365
BsaJI CCNNGG 6 cut(s) 48, 162, 810, 1009, 1541, 1899
BsaXI ACNNNNNCTCC 4 cut(s) 105, 135, 2348, 2378
Bsc4I CCNNNNNNNGG 1 cut(s) 1319
Bse118I RCCGGY 1 cut(s) 1192
Bse1I ACTGG 8 cut(s) 745, 886, 902, 1024, 1031, 1314, 2071, 2240
Bse8I GATNNNNATC 2 cut(s) 636, 2214
BseBI CCWGG 3 cut(s) 910, 1542, 2354
BseDI CCNNGG 6 cut(s) 48, 162, 810, 1009, 1541, 1899
BseGI GGATG 6 cut(s) 564, 1079, 1551, 2215, 2349, 2438
BseJI GATNNNNATC 2 cut(s) 636, 2214
BseLI CCNNNNNNNGG 1 cut(s) 1319
BseMII CTCAG 5 cut(s) 1081, 1191, 1424, 1545, 2360
BseNI ACTGG 8 cut(s) 745, 886, 902, 1024, 1031, 1314, 2071, 2240
BseRI GAGGAG 3 cut(s) 1586, 1656, 1949
BseSI GKGCMC 1 cut(s) 1031
BseXI GCAGC 4 cut(s) 376, 458, 1953, 1956
BsgI GTGCAG 4 cut(s) 165, 1231, 1263, 1960
BshFI GGCC 7 cut(s) 206, 369, 520, 908, 1015, 1165, 1870
BshNI GGYRCC 2 cut(s) 560, 1878
BsiHKAI GWGCWC 3 cut(s) 1068, 1431, 1803
BsiSI CCGG 2 cut(s) 1193, 1443
BslFI GGGAC 2 cut(s) 1123, 1280
BslI CCNNNNNNNGG 1 cut(s) 1319
BsmAI GTCTC 3 cut(s) 1115, 2365, 2425
BsmBI CGTCTC 1 cut(s) 2425
BsmFI GGGAC 2 cut(s) 1123, 1280
BsmI GAATGC 2 cut(s) 8, 2339
BsnI GGCC 7 cut(s) 206, 369, 520, 908, 1015, 1165, 1870
Bso31I GGTCTC 1 cut(s) 2365
Bsp119I TTCGAA 1 cut(s) 1140
Bsp1286I GDGCHC 6 cut(s) 170, 1031, 1068, 1431, 1803, 1920
Bsp19I CCATGG 2 cut(s) 48, 810
BspACI CCGC 2 cut(s) 132, 969
BspANI GGCC 7 cut(s) 206, 369, 520, 908, 1015, 1165, 1870
BspCNI CTCAG 5 cut(s) 1080, 1192, 1425, 1544, 2361
BspHI TCATGA 1 cut(s) 1824
BspLI GGNNCC 5 cut(s) 562, 1111, 1880, 2097, 2361
BspMAI CTGCAG 1 cut(s) 336
BspPI GGATC 9 cut(s) 349, 908, 1046, 1283, 1405, 1429, 2354, 2367, 2429
BspT104I TTCGAA 1 cut(s) 1140
BspT107I GGYRCC 2 cut(s) 560, 1878
BspTNI GGTCTC 1 cut(s) 2365
BsrFI RCCGGY 1 cut(s) 1192
BsrI ACTGG 8 cut(s) 745, 886, 902, 1024, 1031, 1314, 2071, 2240
BssAI RCCGGY 1 cut(s) 1192
BssECI CCNNGG 6 cut(s) 48, 162, 810, 1009, 1541, 1899
BssNI GRCGYC 1 cut(s) 2418
BssT1I CCWWGG 5 cut(s) 48, 162, 810, 1009, 1899
Bst2UI CCWGG 3 cut(s) 910, 1542, 2354
Bst4CI ACNGT 3 cut(s) 1633, 1699, 2413
Bst6I CTCTTC 2 cut(s) 1137, 1296
BstACI GRCGYC 1 cut(s) 2418
BstBI TTCGAA 1 cut(s) 1140
BstC8I GCNNGC 6 cut(s) 371, 414, 1079, 1214, 1846, 1877
BstDEI CTNAG 6 cut(s) 1067, 1200, 1433, 1531, 2130, 2369
BstDSI CCRYGG 2 cut(s) 48, 810
BstF5I GGATG 6 cut(s) 564, 1079, 1551, 2215, 2349, 2438
BstMAI GTCTC 3 cut(s) 1115, 2365, 2425
BstMWI GCNNNNNNNGC 3 cut(s) 446, 1876, 2237
BstNI CCWGG 3 cut(s) 910, 1542, 2354
BstNSI RCATGY 2 cut(s) 981, 1379
BstSCI CCNGG 4 cut(s) 908, 1442, 1540, 2352
BstSFI CTRYAG 2 cut(s) 113, 332
BstSLI GKGCMC 1 cut(s) 1031
BstV1I GCAGC 4 cut(s) 376, 458, 1953, 1956
BstV2I GAAGAC 1 cut(s) 2048
BstX2I RGATCY 2 cut(s) 1667, 2359
BstYI RGATCY 2 cut(s) 1667, 2359
BsuI GTATCC 1 cut(s) 664
BsuRI GGCC 7 cut(s) 206, 369, 520, 908, 1015, 1165, 1870
BtgI CCRYGG 2 cut(s) 48, 810
BtsCI GGATG 6 cut(s) 564, 1079, 1551, 2215, 2349, 2438
BtsI GCAGTG 2 cut(s) 177, 2304
BtsIMutI CAGTG 7 cut(s) 177, 879, 895, 1031, 1431, 2304, 2366
Cac8I GCNNGC 6 cut(s) 371, 414, 1079, 1214, 1846, 1877
CaiI CAGNNNCTG 1 cut(s) 1124
CciI TCATGA 1 cut(s) 1824
Cfr10I RCCGGY 1 cut(s) 1192
Cfr13I GGNCC 5 cut(s) 204, 912, 1013, 1110, 2047
Csp6I GTAC 6 cut(s) 353, 859, 1466, 1769, 1905, 2326
CviQI GTAC 6 cut(s) 353, 859, 1466, 1769, 1905, 2326
DdeI CTNAG 6 cut(s) 1067, 1200, 1433, 1531, 2130, 2369
EaeI YGGCCR 1 cut(s) 367
Eam1104I CTCTTC 2 cut(s) 1137, 1296
EarI CTCTTC 2 cut(s) 1137, 1296
Ecl136II GAGCTC 1 cut(s) 1066
Eco130I CCWWGG 5 cut(s) 48, 162, 810, 1009, 1899
Eco24I GRGCYC 3 cut(s) 170, 1068, 1920
Eco31I GGTCTC 1 cut(s) 2365
Eco32I GATATC 2 cut(s) 719, 2308
Eco47I GGWCC 3 cut(s) 912, 1110, 2047
Eco53kI GAGCTC 1 cut(s) 1066
EcoICRI GAGCTC 1 cut(s) 1066
EcoO109I RGGNCCY 1 cut(s) 1110
EcoRI GAATTC 2 cut(s) 221, 1806
EcoRII CCWGG 3 cut(s) 908, 1540, 2352
EcoRV GATATC 2 cut(s) 719, 2308
EcoT14I CCWWGG 5 cut(s) 48, 162, 810, 1009, 1899
EcoT38I GRGCYC 3 cut(s) 170, 1068, 1920
ErhI CCWWGG 5 cut(s) 48, 162, 810, 1009, 1899
Esp3I CGTCTC 1 cut(s) 2425
FalI AAGNNNNNCTT 2 cut(s) 1070, 1102
FaqI GGGAC 2 cut(s) 1123, 1280
FauNDI CATATG 1 cut(s) 2242
FblI GTMKAC 1 cut(s) 867
Fnu4HI GCNGC 4 cut(s) 390, 447, 1942, 1945
FokI GGATG 6 cut(s) 551, 1086, 1558, 2222, 2336, 2425
FriOI GRGCYC 3 cut(s) 170, 1068, 1920
Fsp4HI GCNGC 4 cut(s) 390, 447, 1942, 1945
FspBI CTAG 8 cut(s) 266, 516, 759, 1226, 1463, 1841, 1988, 2228
GluI GCNGC 4 cut(s) 390, 447, 1942, 1945
GsuI CTGGAG 1 cut(s) 762
HaeIII GGCC 7 cut(s) 206, 369, 520, 908, 1015, 1165, 1870
HapII CCGG 2 cut(s) 1193, 1443
Hin1I GRCGYC 1 cut(s) 2418
HincII GTYRAC 3 cut(s) 696, 1001, 2416
HindII GTYRAC 3 cut(s) 696, 1001, 2416
HindIII AAGCTT 2 cut(s) 1846, 2033
HinfI GANTC 9 cut(s) 419, 547, 609, 1652, 1782, 1862, 1994, 2053, 2070
HpaII CCGG 2 cut(s) 1193, 1443
HphI GGTGA 2 cut(s) 12, 1107
Hpy166II GTNNAC 9 cut(s) 618, 696, 868, 893, 915, 1001, 1188, 2143, 2416
Hpy188I TCNGA 9 cut(s) 670, 716, 1070, 1174, 1259, 1410, 1421, 1657, 2017
Hpy188III TCNNGA 6 cut(s) 836, 1386, 1432, 1825, 2099, 2311
Hpy8I GTNNAC 9 cut(s) 618, 696, 868, 893, 915, 1001, 1188, 2143, 2416
HpyAV CCTTC 6 cut(s) 92, 331, 1296, 1383, 1881, 2399
HpyCH4III ACNGT 3 cut(s) 1633, 1699, 2413
HpyCH4IV ACGT 1 cut(s) 2418
HpyF10VI GCNNNNNNNGC 3 cut(s) 446, 1876, 2237
HpyF3I CTNAG 6 cut(s) 1067, 1200, 1433, 1531, 2130, 2369
HpySE526I ACGT 1 cut(s) 2418
Hsp92I GRCGYC 1 cut(s) 2418
LmnI GCTCC 7 cut(s) 580, 743, 1434, 1445, 1573, 1798, 2101
Lsp1109I GCAGC 4 cut(s) 376, 458, 1953, 1956
LweI GCATC 6 cut(s) 376, 1064, 1137, 2278, 2358, 2388
MaeI CTAG 8 cut(s) 266, 516, 759, 1226, 1463, 1841, 1988, 2228
MaeII ACGT 1 cut(s) 2418
MaeIII GTNAC 5 cut(s) 829, 1195, 1961, 2160, 2364
MfeI CAATTG 1 cut(s) 1740
MflI RGATCY 2 cut(s) 1667, 2359
MhlI GDGCHC 6 cut(s) 170, 1031, 1068, 1431, 1803, 1920
MlsI TGGCCA 1 cut(s) 369
MluNI TGGCCA 1 cut(s) 369
MlyI GAGTC 5 cut(s) 541, 1661, 1871, 1988, 2047
MmeI TCCRAC 2 cut(s) 1399, 1695
Mox20I TGGCCA 1 cut(s) 369
MscI TGGCCA 1 cut(s) 369
MseI TTAA 4 cut(s) 279, 1503, 1599, 1968
MslI CAYNNNNRTG 3 cut(s) 944, 2344, 2396
Msp20I TGGCCA 1 cut(s) 369
MspI CCGG 2 cut(s) 1193, 1443
MspR9I CCNGG 4 cut(s) 910, 1444, 1542, 2354
MunI CAATTG 1 cut(s) 1740
Mva1269I GAATGC 2 cut(s) 8, 2339
MvaI CCWGG 3 cut(s) 910, 1542, 2354
MwoI GCNNNNNNNGC 3 cut(s) 446, 1876, 2237
NciI CCSGG 1 cut(s) 1444
NcoI CCATGG 2 cut(s) 48, 810
NdeI CATATG 1 cut(s) 2242
NlaIV GGNNCC 5 cut(s) 562, 1111, 1880, 2097, 2361
NmeAIII GCCGAG 1 cut(s) 1896
NmuCI GTSAC 2 cut(s) 1961, 2364
NspI RCATGY 2 cut(s) 981, 1379
NspV TTCGAA 1 cut(s) 1140
PagI TCATGA 1 cut(s) 1824
PctI GAATGC 2 cut(s) 8, 2339
PfeI GAWTC 4 cut(s) 419, 609, 1782, 2070
PfoI TCCNGGA 1 cut(s) 2352
PkrI GCNGC 4 cut(s) 391, 448, 1943, 1946
PleI GAGTC 5 cut(s) 541, 1660, 1870, 1988, 2047
PpsI GAGTC 5 cut(s) 541, 1660, 1870, 1988, 2047
PpuMI RGGWCCY 1 cut(s) 1110
PsiI TTATAA 1 cut(s) 150
Psp124BI GAGCTC 1 cut(s) 1068
Psp5II RGGWCCY 1 cut(s) 1110
Psp6I CCWGG 3 cut(s) 908, 1540, 2352
PspGI CCWGG 3 cut(s) 908, 1540, 2352
PspN4I GGNNCC 5 cut(s) 562, 1111, 1880, 2097, 2361
PspPI GGNCC 5 cut(s) 204, 912, 1013, 1110, 2047
PspPPI RGGWCCY 1 cut(s) 1110
PstI CTGCAG 1 cut(s) 336
PstNI CAGNNNCTG 1 cut(s) 1124
PsuI RGATCY 2 cut(s) 1667, 2359
RsaI GTAC 6 cut(s) 354, 860, 1467, 1770, 1906, 2327
RsaNI GTAC 6 cut(s) 353, 859, 1466, 1769, 1905, 2326
RseI CAYNNNNRTG 3 cut(s) 944, 2344, 2396
SacI GAGCTC 1 cut(s) 1068
SaqAI TTAA 4 cut(s) 279, 1503, 1599, 1968
SatI GCNGC 4 cut(s) 390, 447, 1942, 1945
Sau96I GGNCC 5 cut(s) 204, 912, 1013, 1110, 2047
ScaI AGTACT 2 cut(s) 1467, 2327
SchI GAGTC 5 cut(s) 541, 1661, 1871, 1988, 2047
ScrFI CCNGG 4 cut(s) 910, 1444, 1542, 2354
SduI GDGCHC 6 cut(s) 170, 1031, 1068, 1431, 1803, 1920
SfaNI GCATC 6 cut(s) 376, 1064, 1137, 2278, 2358, 2388
SfcI CTRYAG 2 cut(s) 113, 332
SfuI TTCGAA 1 cut(s) 1140
SinI GGWCC 3 cut(s) 912, 1110, 2047
SmiMI CAYNNNNRTG 3 cut(s) 944, 2344, 2396
SmlI CTYRAG 2 cut(s) 2165, 2179
SmoI CTYRAG 2 cut(s) 2165, 2179
SsiI CCGC 2 cut(s) 132, 969
SspI AATATT 1 cut(s) 2460
SspMI CTAG 8 cut(s) 266, 516, 759, 1226, 1463, 1841, 1988, 2228
SstI GAGCTC 1 cut(s) 1068
StyD4I CCNGG 4 cut(s) 908, 1442, 1540, 2352
StyI CCWWGG 5 cut(s) 48, 162, 810, 1009, 1899
TaaI ACNGT 3 cut(s) 1633, 1699, 2413
TaiI ACGT 1 cut(s) 2421
TaqI TCGA 3 cut(s) 456, 1140, 2056
TatI WGTACW 2 cut(s) 1465, 2325
TfiI GAWTC 4 cut(s) 419, 609, 1782, 2070
Tru1I TTAA 4 cut(s) 279, 1503, 1599, 1968
Tru9I TTAA 4 cut(s) 279, 1503, 1599, 1968
TscAI CASTG 7 cut(s) 184, 886, 902, 1031, 1431, 2304, 2373
TseFI GTSAC 2 cut(s) 1961, 2364
TseI GCWGC 4 cut(s) 389, 446, 1941, 1944
Tsp45I GTSAC 2 cut(s) 1961, 2364
TspDTI ATGAA 7 cut(s) 32, 601, 1036, 1562, 1608, 1813, 2226
TspGWI ACGGA 4 cut(s) 783, 1314, 2060, 2352
TspRI CASTG 7 cut(s) 184, 886, 902, 1031, 1431, 2304, 2373
VpaK11BI GGWCC 3 cut(s) 912, 1110, 2047
XapI RAATTY 6 cut(s) 221, 466, 487, 1595, 1806, 2314
XceI RCATGY 2 cut(s) 981, 1379
XcmI CCANNNNNNNNNTGG 1 cut(s) 1031
XmiI GTMKAC 1 cut(s) 867
XspI CTAG 8 cut(s) 266, 516, 759, 1226, 1463, 1841, 1988, 2228
ZraI GACGTC 1 cut(s) 2419
ZrmI AGTACT 2 cut(s) 1467, 2327
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.