Rw7G036050

Bulb-type mannose-specific lectin

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
54167253 .. 54169644
2392 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G036050.1

Sequence Viewer

Length: 2361 bp
ATGGCTTTTGCACTGCCACATCTTTTATGCTTCCTAGTTTTCCTTCAACAATTGCCAATTTTCACCACTGCTCAAAATATATCTTTGGGCACATCCATGACTGCAAAACCGGGCAATAGCTCTTTTTGGGCCTCACCATCTGGGGAATTTGCTTTCGGTTTCCAAGAAATTGGTAACCATGGTTTCCTACTAGCCATTTGGTTCAACAAAATAGCAGAAAGAACTATTGTCTGGTCAGCCAATGGCAACAGTCTAGTGCAAAAGGGATCCAGAGTTCAACTAACTAGTGAAGGCAAGATTATGCTCAACGATGCAGCGTCAGGCAAGCAAACACTGATTGCTGATTCCACTGCGAATGAAGTTGCATATGCAGCCATGCTCGACACGGGAAATTTTGTGCTGGCTAACAACAATTCAGCCAATTTGTGGCAGAGTTTTGATCATCCCACGAATACAATCCTACCTACACAGACTTTATATCAAGGCACCACACTCTTTGCTCCCTATACGGCATCAAATTACTCGAAAGGAAGATTCATGTTTACATTAGAAGCTGGTGGAAATCTCTTGCTCTACACTACGCATTTCCCATTAGATACGGCCAATGCTGCTTATTGGTCAAGCGAAACTGAGGGTACCGGCTTTCAGGTCGTCTTTAACCAGTCTGGCTCTATTTTTCTTACTTCAAGGAATGGAAGCATACTTACTGTGGTAGTAAACAATACAGTTCCATTGCCAGGTTTCTACCGCAGAACAACTATCGACTATGATGGAGTATTGAGGTACTATATCTACCCGAAAAGCAGTAACTCGAGTGAAGGAGTGTGGCAGATGGCTTGGTCCACATTGTCCTTCATACCTTCAAACATCTGTGTCAACATTTCGTACTATAAAGGTGGTGGTGCGTGTGGTTTCAACAGCTTATGCAGAAATGACCAGAAACCGAGTTGCCAATGCCCAAATGGTTATGTCTTTGTTGATCCTGATGATGTGATGAGAGGATGCAAGCAGAACTTTCGTCCACAAAGTTGTGATGAGGTCCCATCGATGGAGGAATTTTATTTTGAAGAAATGCAAAACACAGATTGGAAAGAATCTGAGTACGAGAAGTACACGCCAGTGACTGAAGACTGGTGCAGGCAAGCTTGCCTAGCTGATTGTTTCTGTGCCCTTGCCAATTTCAGAAACGGGGATTGTTGGTTAAAGGGAATGCCTCTTCGGAATGGGAGGATCGACCCTAGCAGTGGTGTGAAAGCTCTCATCAAAATAAGGAGAGACAATTCCACTTTGAAACTGCCACATTCACCACATTCAAGAACAAAACGCAACTCAACTCTCTTGCTCGTTGGATCGGTGCTGTTGAGTAGCTCCGGGTTCTTAAACTTCCTCTTAGTGCTAATAACCTATTTGATTGTTTCCGGTACTTACCGTAGAAGACCAAACATGATTCAACCTTACACAGTCTTGCCGGGTATGAACCTGATTTGTTTCAGTTATGAGGAGCTAAACAAAGCTACCATTGGATTCAAGGAAGAACTCGGTCGTGGTGCTTTTGGAACAGTTTTTAGAGGAGTTTTGGTGTCTGAGAAATGCGTAGCTGTCAAAAGACTGAACAATATGGTTAAAGAAAGCGAGTTAGAATTCAAAGCTGAATTGAGTGCAATTGGCAGAACAAATCACAGAAACCTAGTTCAACTACTAGGGTTCTGCAATGAAGGGCAGCACCGAATTCTTGTGTATGAGTTCATGAGCAATGGTTCTCTAGCAAGCTTCCTCTTTGGAAAGTCAAGGCCGAATTGGTACCGAAGGAAGGAGATTGCCTTGGGAACTGCTAGAGGGCTCTTGTATTTGCATGAGGAGTGCAGCAACCAAATCATACATTGCGACATTAAGCCTCAAAATATTCTCCTAGATGACTCTTTCACGGCAAGAATTTCCGACTTTGGATTAGCCAAGCTTTTGAAAACGGACCAGACTCGAACTACTACGGGAATCAGAGGGACAAAAGGGTACGTTGCCCCCGAATGGTTTAAAAACATGCCGATCACAACCAAGGTGGATGTTTACAGCTATGGCATTTTGTTACTGGAGATTATTTTTTGCAGAAAGTACTTTGAAGCAGAGGCAGAGAATGAACAACAAATGATACTAGCGGATTGGGCTTATGATTGCTACGCGGAGAAGAAGCTGCAGTTACTTTTGGAGAATGACGATGAGAAGTACGTGATGATCGCATTGTGGTGTATTCAGGAGGATCCGTCATTGAGACCCACCGCCAAGAAACTCGCCCTGATGCTCGAAGGAACTCTTCAAGTCTCAGTTCCACCAGACCCGTCCTCATTCACAAGTTCAATAGTGTAA

Protein Analysis

786

Amino Acids

88.2

Weight (kDa)

7.08

Isoelectric Point (pI)

38.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 75 - 159 1.5e-15 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 509 - 763 1.4e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 510 - 762 1.8e-51 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000299)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43401 FvH4_3g43402 FvH4_3g43403 FvH4_3g43440 FvH4_3g43710 FvH4_3g43772
malus_domestica MD03G1021800.v1.1 MD03G1022000.v1.1 MD11G1024500.v1.1 MD11G1024700.v1.1 MD11G1025200.v1.1 MD11G1025500.v1.1 MD11G1025600.v1.1 MD11G1026200.v1.1 MD11G1026400.v1.1 MD11G1026500.v1.1 MD11G1026600.v1.1 MD11G1026800.v1.1 MD11G1027300.v1.1
prunus_persica Prupe.6G020400_v2.0.a1 Prupe.6G020500_v2.0.a1 Prupe.6G020600_v2.0.a1 Prupe.6G020700_v2.0.a1 Prupe.6G020800_v2.0.a1 Prupe.6G020900_v2.0.a1 Prupe.6G021000_v2.0.a1 Prupe.6G021500_v2.0.a1 Prupe.6G021600_v2.0.a1
pyrus_communis pycom03g01850 pycom03g01870 pycom03g01900 pycom03g01910 pycom11g01950 pycom11g01980 pycom11g01990 pycom11g02030 pycom11g02040
rosa_chinensis RchiOBHm_Chr5g0077411 RchiOBHm_Chr5g0077421 RchiOBHm_Chr5g0077571 RchiOBHm_Chr5g0077601 RchiOBHm_Chr5g0077621 RchiOBHm_Chr5g0077651 RchiOBHm_Chr5g0077661 RchiOBHm_Chr5g0077671 RchiOBHm_Chr5g0077701 RchiOBHm_Chr5g0077741 RchiOBHm_Chr5g0077791 RchiOBHm_Chr5g0077861 RchiOBHm_Chr5g0078871 RchiOBHm_Chr5g0078901 RchiOBHm_Chr5g0078941 RchiOBHm_Chr5g0079081 RchiOBHm_Chr5g0079091 RchiOBHm_Chr7g0233481
rosa_laevigata RLG00000036694 RLG00000036704 RLG00000036705 RLG00000036710 RLG00000036713 RLG00000036714 RLG00000036716 RLG00000036793 RLG00000036796 RLG00000036804 RLG00000036806
rosa_multiflora Rmu_co8130992.1_g000001 Rmu_sc0000029.1_g000037 Rmu_sc0002187.1_g000023 Rmu_sc0004168.1_g000001 Rmu_sc0004168.1_g000004 Rmu_sc0004168.1_g000018 Rmu_sc0004168.1_g000028 Rmu_sc0004168.1_g000033 Rmu_sc0004168.1_g000056 Rmu_sc0004277.1_g000009 Rmu_sc0004277.1_g000016 Rmu_sc0004277.1_g000018 Rmu_sc0004277.1_g000020 Rmu_sc0004277.1_g000084 Rmu_sc0004277.1_g000087 Rmu_sc0012487.1_g000001 Rmu_sc0012487.1_g000002
rosa_roxburghii Rroxscaffold_1G00003760 Rroxscaffold_1G00003780 Rroxscaffold_1G00004370 Rroxscaffold_1G00004400 Rroxscaffold_1G00004490 Rroxscaffold_1G00004510 Rroxscaffold_3G00227260 Rroxscaffold_5G00366480
rosa_rugosa Rorug05G0454800 Rorug05G0455700 Rorug05G0455900 Rorug05G0456100 Rorug05G0456300 Rorug05G0456700.1 Rorug05G0461800 Rorug05G0462100 Rorug07G0280900.1 Rorug07G0281000
rosa_samantha Rh5CG562200 Rh5DG543500 Rh5DG544200 Rh5DG544400 Rh5DG544500 Rh5DG544600 Rh5DG544700 Rh5DG544900 Rh5DG545200 Rh5DG549700 Rh7DG426000
rosa_wichuraiana Rw0G003130 Rw0G023780 Rw0G023790 Rw5G046780 Rw5G047330 Rw5G047350 Rw5G047370 Rw5G047390 Rw5G047420 Rw7G036050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 2 cut(s) 635, 1800
AccB1I GGYRCC 3 cut(s) 485, 635, 1800
AccB7I CCANNNNNTGG 1 cut(s) 426
AccII CGCG 1 cut(s) 2177
AciI CCGC 4 cut(s) 748, 2153, 2177, 2274
AclWI GGATC 7 cut(s) 261, 274, 974, 1238, 1357, 2249, 2262
AcoI YGGCCR 1 cut(s) 600
AcsI RAATTY 6 cut(s) 146, 391, 1055, 1640, 1728, 1932
AcuI CTGAAG 1 cut(s) 1146
AfiI CCNNNNNNNGG 6 cut(s) 426, 737, 1048, 1244, 1810, 2025
AhlI ACTAGT 1 cut(s) 284
AjnI CCWGG 1 cut(s) 736
AleI CACNNNNGTG 1 cut(s) 1118
AloI GAACNNNNNNTCC 2 cut(s) 258, 290
Alw26I GTCTC 3 cut(s) 1269, 2260, 2320
AlwI GGATC 7 cut(s) 261, 274, 974, 1238, 1357, 2249, 2262
AlwNI CAGNNNCTG 1 cut(s) 1124
Ama87I CYCGRG 1 cut(s) 811
AoxI GGCC 3 cut(s) 129, 600, 1790
ApeKI GCWGC 6 cut(s) 314, 371, 608, 1720, 1863, 2188
ApoI RAATTY 6 cut(s) 146, 391, 1055, 1640, 1728, 1932
Asp718I GGTACC 2 cut(s) 635, 1800
AspS9I GGNCC 4 cut(s) 129, 840, 1039, 1969
AsuC2I CCSGG 3 cut(s) 111, 1372, 1470
AsuHPI GGTGA 3 cut(s) 55, 126, 1296
AvaI CYCGRG 1 cut(s) 811
AvaII GGWCC 3 cut(s) 840, 1039, 1969
BaeGI GKGCMC 2 cut(s) 92, 1171
BamHI GGATCC 2 cut(s) 266, 2254
BanI GGYRCC 3 cut(s) 485, 635, 1800
BanII GRGCYC 1 cut(s) 1842
BarI GAAGNNNNNNTAC 2 cut(s) 688, 720
BbsI GAAGAC 2 cut(s) 1134, 1441
BbvI GCAGC 6 cut(s) 326, 383, 595, 1732, 1875, 2175
BccI CCATC 5 cut(s) 145, 764, 826, 1042, 1051
BceAI ACGGC 3 cut(s) 525, 615, 1941
BcgI CGANNNNNNTGC 2 cut(s) 998, 1032
BciT130I CCWGG 1 cut(s) 738
BclI TGATCA 1 cut(s) 439
BcnI CCSGG 3 cut(s) 111, 1372, 1470
BcoDI GTCTC 3 cut(s) 1269, 2260, 2320
BcuI ACTAGT 1 cut(s) 284
BfmI CTRYAG 1 cut(s) 2189
BisI GCNGC 6 cut(s) 315, 372, 609, 1721, 1864, 2189
BlsI GCNGC 6 cut(s) 316, 373, 610, 1722, 1865, 2190
BmcAI AGTACT 1 cut(s) 2111
Bme1390I CCNGG 4 cut(s) 111, 738, 1372, 1470
Bme18I GGWCC 3 cut(s) 840, 1039, 1969
BmeT110I CYCGRG 1 cut(s) 811
BmgT120I GGNCC 4 cut(s) 129, 840, 1039, 1969
BmiI GGNNCC 6 cut(s) 268, 487, 637, 1041, 1802, 2256
BmrFI CCNGG 4 cut(s) 111, 738, 1372, 1470
BmsI GCATC 4 cut(s) 301, 521, 992, 2283
BpiI GAAGAC 2 cut(s) 1134, 1441
BpmI CTGGAG 1 cut(s) 2108
BpuMI CCSGG 3 cut(s) 111, 1372, 1470
Bsa29I ATCGAT 1 cut(s) 1046
BsaAI YACGTR 1 cut(s) 2224
BsaI GGTCTC 1 cut(s) 2260
BsaJI CCNNGG 3 cut(s) 178, 1821, 2052
BsaWI WCCGGW 1 cut(s) 1418
BsaXI ACNNNNNCTCC 4 cut(s) 1563, 1593, 2243, 2273
Bsc4I CCNNNNNNNGG 6 cut(s) 426, 737, 1048, 1244, 1810, 2025
Bse118I RCCGGY 1 cut(s) 638
Bse1I ACTGG 4 cut(s) 661, 1118, 1136, 2091
Bse3DI GCAATG 4 cut(s) 731, 1717, 1759, 1879
BseBI CCWGG 1 cut(s) 738
BseCI ATCGAT 1 cut(s) 1046
BseDI CCNNGG 3 cut(s) 178, 1821, 2052
BseGI GGATG 4 cut(s) 92, 442, 1007, 2065
BseLI CCNNNNNNNGG 6 cut(s) 426, 737, 1048, 1244, 1810, 2025
BseMI GCAATG 4 cut(s) 731, 1717, 1759, 1879
BseMII CTCAG 4 cut(s) 621, 1089, 1575, 2331
BseNI ACTGG 4 cut(s) 661, 1118, 1136, 2091
BseRI GAGGAG 3 cut(s) 1514, 1584, 1871
BseSI GKGCMC 2 cut(s) 92, 1171
BseXI GCAGC 6 cut(s) 326, 383, 595, 1732, 1875, 2175
BsgI GTGCAG 2 cut(s) 1156, 1882
Bsh1236I CGCG 1 cut(s) 2177
Bsh1285I CGRYCG 1 cut(s) 1543
BshFI GGCC 3 cut(s) 131, 602, 1792
BshNI GGYRCC 3 cut(s) 485, 635, 1800
BshVI ATCGAT 1 cut(s) 1046
BsiEI CGRYCG 1 cut(s) 1543
BsiHKCI CYCGRG 1 cut(s) 811
BsiSI CCGG 5 cut(s) 110, 639, 1371, 1419, 1469
BslFI GGGAC 2 cut(s) 1025, 2014
BslI CCNNNNNNNGG 6 cut(s) 426, 737, 1048, 1244, 1810, 2025
BsmAI GTCTC 3 cut(s) 1269, 2260, 2320
BsmFI GGGAC 2 cut(s) 1025, 2014
BsmI GAATGC 1 cut(s) 1215
BsnI GGCC 3 cut(s) 131, 602, 1792
Bso31I GGTCTC 1 cut(s) 2260
BsoBI CYCGRG 1 cut(s) 811
Bsp1286I GDGCHC 3 cut(s) 92, 1171, 1842
Bsp143I GATC 8 cut(s) 266, 439, 979, 1230, 1349, 2043, 2229, 2254
Bsp19I CCATGG 1 cut(s) 178
BspACI CCGC 4 cut(s) 748, 2153, 2177, 2274
BspANI GGCC 3 cut(s) 131, 602, 1792
BspCNI CTCAG 4 cut(s) 622, 1090, 1576, 2330
BspDI ATCGAT 1 cut(s) 1046
BspFNI CGCG 1 cut(s) 2177
BspHI TCATGA 1 cut(s) 1746
BspLI GGNNCC 6 cut(s) 268, 487, 637, 1041, 1802, 2256
BspMAI CTGCAG 1 cut(s) 2193
BspPI GGATC 7 cut(s) 261, 274, 974, 1238, 1357, 2249, 2262
BspT107I GGYRCC 3 cut(s) 485, 635, 1800
BspTNI GGTCTC 1 cut(s) 2260
BsrDI GCAATG 4 cut(s) 731, 1717, 1759, 1879
BsrFI RCCGGY 1 cut(s) 638
BsrI ACTGG 4 cut(s) 661, 1118, 1136, 2091
BssAI RCCGGY 1 cut(s) 638
BssECI CCNNGG 3 cut(s) 178, 1821, 2052
BssMI GATC 8 cut(s) 266, 439, 979, 1230, 1349, 2043, 2229, 2254
BssT1I CCWWGG 3 cut(s) 178, 1821, 2052
Bst2UI CCWGG 1 cut(s) 738
Bst4CI ACNGT 6 cut(s) 251, 709, 727, 1430, 1462, 1561
Bst6I CTCTTC 2 cut(s) 1221, 2313
BstBAI YACGTR 1 cut(s) 2224
BstC8I GCNNGC 7 cut(s) 326, 402, 1007, 1139, 1143, 1147, 1768
BstDEI CTNAG 5 cut(s) 630, 1098, 1390, 1584, 2317
BstDSI CCRYGG 1 cut(s) 178
BstEII GGTNACC 1 cut(s) 173
BstF5I GGATG 4 cut(s) 92, 442, 1007, 2065
BstFNI CGCG 1 cut(s) 2177
BstKTI GATC 8 cut(s) 269, 442, 982, 1233, 1352, 2046, 2232, 2257
BstMAI GTCTC 3 cut(s) 1269, 2260, 2320
BstMBI GATC 8 cut(s) 266, 439, 979, 1230, 1349, 2043, 2229, 2254
BstMCI CGRYCG 1 cut(s) 1543
BstMWI GCNNNNNNNGC 4 cut(s) 371, 608, 1151, 2159
BstNI CCWGG 1 cut(s) 738
BstNSI RCATGY 1 cut(s) 2041
BstPI GGTNACC 1 cut(s) 173
BstSCI CCNGG 4 cut(s) 109, 736, 1370, 1468
BstSFI CTRYAG 1 cut(s) 2189
BstSLI GKGCMC 2 cut(s) 92, 1171
BstUI CGCG 1 cut(s) 2177
BstV1I GCAGC 6 cut(s) 326, 383, 595, 1732, 1875, 2175
BstV2I GAAGAC 2 cut(s) 1134, 1441
BstX2I RGATCY 2 cut(s) 266, 2254
BstXI CCANNNNNNTGG 1 cut(s) 170
BstYI RGATCY 2 cut(s) 266, 2254
Bsu15I ATCGAT 1 cut(s) 1046
BsuRI GGCC 3 cut(s) 131, 602, 1792
BsuTUI ATCGAT 1 cut(s) 1046
BtgI CCRYGG 1 cut(s) 178
BtsCI GGATG 4 cut(s) 92, 442, 1007, 2065
BtsI GCAGTG 4 cut(s) 11, 66, 348, 1249
BtsIMutI CAGTG 6 cut(s) 11, 66, 332, 348, 1125, 1249
Cac8I GCNNGC 7 cut(s) 326, 402, 1007, 1139, 1143, 1147, 1768
CaiI CAGNNNCTG 1 cut(s) 1124
CciI TCATGA 1 cut(s) 1746
Cfr10I RCCGGY 1 cut(s) 638
Cfr13I GGNCC 4 cut(s) 129, 840, 1039, 1969
ClaI ATCGAT 1 cut(s) 1046
CseI GACGC 1 cut(s) 306
CspCI CAANNNNNGTGG 4 cut(s) 478, 513, 2037, 2072
CviAII CATG 8 cut(s) 97, 179, 376, 538, 1444, 1747, 1853, 2038
DdeI CTNAG 5 cut(s) 630, 1098, 1390, 1584, 2317
DpnI GATC 8 cut(s) 268, 441, 981, 1232, 1351, 2045, 2231, 2256
DpnII GATC 8 cut(s) 266, 439, 979, 1230, 1349, 2043, 2229, 2254
DraI TTTAAA 1 cut(s) 2032
EaeI YGGCCR 1 cut(s) 600
Eam1104I CTCTTC 2 cut(s) 1221, 2313
EarI CTCTTC 2 cut(s) 1221, 2313
Eco130I CCWWGG 3 cut(s) 178, 1821, 2052
Eco24I GRGCYC 1 cut(s) 1842
Eco31I GGTCTC 1 cut(s) 2260
Eco47I GGWCC 3 cut(s) 840, 1039, 1969
Eco57I CTGAAG 1 cut(s) 1146
Eco88I CYCGRG 1 cut(s) 811
Eco91I GGTNACC 1 cut(s) 173
EcoO109I RGGNCCY 1 cut(s) 1039
EcoO65I GGTNACC 1 cut(s) 173
EcoRI GAATTC 2 cut(s) 1640, 1728
EcoRII CCWGG 1 cut(s) 736
EcoT14I CCWWGG 3 cut(s) 178, 1821, 2052
EcoT38I GRGCYC 1 cut(s) 1842
ErhI CCWWGG 3 cut(s) 178, 1821, 2052
FaeI CATG 8 cut(s) 100, 182, 379, 541, 1447, 1750, 1856, 2041
FalI AAGNNNNNCTT 4 cut(s) 998, 1030, 2292, 2324
FaqI GGGAC 2 cut(s) 1025, 2014
FatI CATG 8 cut(s) 96, 178, 375, 537, 1443, 1746, 1852, 2037
FauNDI CATATG 1 cut(s) 367
FbaI TGATCA 1 cut(s) 439
Fnu4HI GCNGC 6 cut(s) 315, 372, 609, 1721, 1864, 2189
FokI GGATG 4 cut(s) 79, 429, 1014, 2072
FriOI GRGCYC 1 cut(s) 1842
Fsp4HI GCNGC 6 cut(s) 315, 372, 609, 1721, 1864, 2189
GluI GCNGC 6 cut(s) 315, 372, 609, 1721, 1864, 2189
GsuI CTGGAG 1 cut(s) 2108
HaeIII GGCC 3 cut(s) 131, 602, 1792
HapII CCGG 5 cut(s) 110, 639, 1371, 1419, 1469
HgaI GACGC 1 cut(s) 306
Hin1II CATG 8 cut(s) 100, 182, 379, 541, 1447, 1750, 1856, 2041
HincII GTYRAC 1 cut(s) 877
HindII GTYRAC 1 cut(s) 877
HindIII AAGCTT 3 cut(s) 1143, 1768, 1955
HinfI GANTC 8 cut(s) 344, 534, 1094, 1447, 1524, 1916, 1975, 1992
HpaII CCGG 5 cut(s) 110, 639, 1371, 1419, 1469
HphI GGTGA 3 cut(s) 55, 126, 1296
Hpy166II GTNNAC 7 cut(s) 543, 718, 843, 877, 1022, 1113, 2065
Hpy188I TCNGA 6 cut(s) 1099, 1184, 1221, 1585, 1939, 1997
Hpy188III TCNNGA 5 cut(s) 270, 983, 1314, 1747, 2249
Hpy8I GTNNAC 7 cut(s) 543, 718, 843, 877, 1022, 1113, 2065
HpyAV CCTTC 9 cut(s) 53, 284, 812, 862, 870, 1709, 1800, 1804, 2294
HpyCH4III ACNGT 6 cut(s) 251, 709, 727, 1430, 1462, 1561
HpyCH4IV ACGT 2 cut(s) 2013, 2223
HpyF10VI GCNNNNNNNGC 4 cut(s) 371, 608, 1151, 2159
HpyF3I CTNAG 5 cut(s) 630, 1098, 1390, 1584, 2317
HpySE526I ACGT 2 cut(s) 2013, 2223
Hsp92II CATG 8 cut(s) 100, 182, 379, 541, 1447, 1750, 1856, 2041
KpnI GGTACC 2 cut(s) 639, 1804
Ksp22I TGATCA 1 cut(s) 439
Kzo9I GATC 8 cut(s) 266, 439, 979, 1230, 1349, 2043, 2229, 2254
LmnI GCTCC 3 cut(s) 505, 1373, 1501
Lsp1109I GCAGC 6 cut(s) 326, 383, 595, 1732, 1875, 2175
LweI GCATC 4 cut(s) 301, 521, 992, 2283
MaeII ACGT 2 cut(s) 2013, 2223
MaeIII GTNAC 5 cut(s) 173, 806, 1120, 2082, 2193
MalI GATC 8 cut(s) 268, 441, 981, 1232, 1351, 2045, 2231, 2256
MboI GATC 8 cut(s) 266, 439, 979, 1230, 1349, 2043, 2229, 2254
MboII GAAGA 8 cut(s) 543, 1079, 1139, 1208, 1446, 1544, 2194, 2300
MfeI CAATTG 2 cut(s) 50, 1662
MflI RGATCY 2 cut(s) 266, 2254
MhlI GDGCHC 3 cut(s) 92, 1171, 1842
MlyI GAGTC 2 cut(s) 1910, 1969
MmeI TCCRAC 2 cut(s) 1327, 1962
MseI TTAA 6 cut(s) 657, 1202, 1379, 1623, 1890, 2031
MslI CAYNNNNRTG 3 cut(s) 95, 1118, 2239
MspI CCGG 5 cut(s) 110, 639, 1371, 1419, 1469
MspR9I CCNGG 4 cut(s) 111, 738, 1372, 1470
MunI CAATTG 2 cut(s) 50, 1662
Mva1269I GAATGC 1 cut(s) 1215
MvaI CCWGG 1 cut(s) 738
MvnI CGCG 1 cut(s) 2177
MwoI GCNNNNNNNGC 4 cut(s) 371, 608, 1151, 2159
NciI CCSGG 3 cut(s) 111, 1372, 1470
NcoI CCATGG 1 cut(s) 178
NdeI CATATG 1 cut(s) 367
NdeII GATC 8 cut(s) 266, 439, 979, 1230, 1349, 2043, 2229, 2254
NlaIII CATG 8 cut(s) 100, 182, 379, 541, 1447, 1750, 1856, 2041
NlaIV GGNNCC 6 cut(s) 268, 487, 637, 1041, 1802, 2256
NmuCI GTSAC 1 cut(s) 1120
NspI RCATGY 1 cut(s) 2041
OliI CACNNNNGTG 1 cut(s) 1118
PaeR7I CTCGAG 1 cut(s) 811
PagI TCATGA 1 cut(s) 1746
PcsI WCGNNNNNNNCGW 1 cut(s) 2019
PctI GAATGC 1 cut(s) 1215
PfeI GAWTC 6 cut(s) 344, 534, 1094, 1447, 1524, 1992
PflMI CCANNNNNTGG 1 cut(s) 426
PkrI GCNGC 6 cut(s) 316, 373, 610, 1722, 1865, 2190
PleI GAGTC 2 cut(s) 1910, 1969
PpsI GAGTC 2 cut(s) 1910, 1969
Ppu21I YACGTR 1 cut(s) 2224
PpuMI RGGWCCY 1 cut(s) 1039
Psp5II RGGWCCY 1 cut(s) 1039
Psp6I CCWGG 1 cut(s) 736
PspEI GGTNACC 1 cut(s) 173
PspGI CCWGG 1 cut(s) 736
PspN4I GGNNCC 6 cut(s) 268, 487, 637, 1041, 1802, 2256
PspPI GGNCC 4 cut(s) 129, 840, 1039, 1969
PspPPI RGGWCCY 1 cut(s) 1039
PspXI VCTCGAGB 1 cut(s) 811
PstI CTGCAG 1 cut(s) 2193
PstNI CAGNNNCTG 1 cut(s) 1124
PsuI RGATCY 2 cut(s) 266, 2254
RseI CAYNNNNRTG 3 cut(s) 95, 1118, 2239
SaqAI TTAA 6 cut(s) 657, 1202, 1379, 1623, 1890, 2031
SatI GCNGC 6 cut(s) 315, 372, 609, 1721, 1864, 2189
Sau3AI GATC 8 cut(s) 266, 439, 979, 1230, 1349, 2043, 2229, 2254
Sau96I GGNCC 4 cut(s) 129, 840, 1039, 1969
ScaI AGTACT 1 cut(s) 2111
SchI GAGTC 2 cut(s) 1910, 1969
ScrFI CCNGG 4 cut(s) 111, 738, 1372, 1470
SduI GDGCHC 3 cut(s) 92, 1171, 1842
SfaNI GCATC 4 cut(s) 301, 521, 992, 2283
SfcI CTRYAG 1 cut(s) 2189
Sfr274I CTCGAG 1 cut(s) 811
SinI GGWCC 3 cut(s) 840, 1039, 1969
SlaI CTCGAG 1 cut(s) 811
SmiMI CAYNNNNRTG 3 cut(s) 95, 1118, 2239
SmlI CTYRAG 1 cut(s) 811
SmoI CTYRAG 1 cut(s) 811
SpeI ACTAGT 1 cut(s) 284
SsiI CCGC 4 cut(s) 748, 2153, 2177, 2274
SspI AATATT 1 cut(s) 1903
StyD4I CCNGG 4 cut(s) 109, 736, 1370, 1468
StyI CCWWGG 3 cut(s) 178, 1821, 2052
TaaI ACNGT 6 cut(s) 251, 709, 727, 1430, 1462, 1561
TaiI ACGT 2 cut(s) 2016, 2226
TaqI TCGA 8 cut(s) 381, 524, 762, 812, 1046, 1233, 1978, 2298
TaqII GACCGA 1 cut(s) 1529
TatI WGTACW 2 cut(s) 1110, 2109
TfiI GAWTC 6 cut(s) 344, 534, 1094, 1447, 1524, 1992
Tru1I TTAA 6 cut(s) 657, 1202, 1379, 1623, 1890, 2031
Tru9I TTAA 6 cut(s) 657, 1202, 1379, 1623, 1890, 2031
TscAI CASTG 6 cut(s) 18, 73, 339, 355, 1125, 1249
TseFI GTSAC 1 cut(s) 1120
TseI GCWGC 6 cut(s) 314, 371, 608, 1720, 1863, 2188
Tsp45I GTSAC 1 cut(s) 1120
TspDTI ATGAA 7 cut(s) 372, 526, 844, 1490, 1728, 1735, 2148
TspGWI ACGGA 2 cut(s) 1982, 2247
TspRI CASTG 6 cut(s) 18, 73, 339, 355, 1125, 1249
Van91I CCANNNNNTGG 1 cut(s) 426
VpaK11BI GGWCC 3 cut(s) 840, 1039, 1969
XapI RAATTY 6 cut(s) 146, 391, 1055, 1640, 1728, 1932
XceI RCATGY 1 cut(s) 2041
XcmI CCANNNNNNNNNTGG 1 cut(s) 959
XhoI CTCGAG 1 cut(s) 811
ZrmI AGTACT 1 cut(s) 2111
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.