RLG00000036806

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
84842721 .. 84843732
1012 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000036806

Sequence Viewer

Length: 822 bp
ATGAATTATCCATTGAAGAGTCCCAATTTTCTCTACTGGTTAATTTTAACTGGTAGTGCCTTTCAGGTCATCTTCAACCAATCTAGCTCTATTTACCTCACAGCACAGAACGGAAGCATACTTGGTTGGGTCTCTGTAGGAAAAGTTCAGACACAAGACAACTACCAGAGAGCAACTCTTGACTATGATGGAGTTTTGAGGCACTATATCCACCAGAAAAGGGCTGAATCTTGGTCCACTTTTACCTTCATACCTCCAAATATTTGCACAGCAATTCTGGAATATACAGGTGGTGGTGCATGTGGGTTTAACAGTTTATGTATACATGATGAGGATGCAGCTCATACTAAATGCTATGCCCTCCGAGTTACATCCCTGTTCACCGAGATGAGGAGAGGAAGTGGAAATGCTGATTGTTGGAAGAAGCGAATACCTTTTTCAAATGGGAAGATCAAGGATGATGTTAAAGGGTTAGCGCTGGTGAAAATAAGGAAAGACACTTCTACATCAGCAAAAGAAAAAGGTAGTCGAACTCGGCTCATCATTGGAGCAGTGATCATCCTAGTATTAAACAACTTGGTTGTTTCTATAATAACCTATCTGGTTAATCCTCATGCAAAAGTGAATCGACTTAATCCTGTGGTTCAAGGCATGAATCTGAAATGTTTCACTTTCATGGAGCTAAAAGAAGCCACCAACGGACTCGAGGAAGAGCTAGGTCGTGGTGCTTTTGCAACTGTTTTCAAAGGAGTTTTAGCATCTGATAATGGGAAGTTCATTGCTGTCAAAATTAAGATTGAACGCTGTGGCCAACGAAAATGA

Protein Analysis

274

Amino Acids

30.38

Weight (kDa)

9.53

Isoelectric Point (pI)

30.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000299)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g43401 FvH4_3g43402 FvH4_3g43403 FvH4_3g43440 FvH4_3g43710 FvH4_3g43772
malus_domestica MD03G1021800.v1.1 MD03G1022000.v1.1 MD11G1024500.v1.1 MD11G1024700.v1.1 MD11G1025200.v1.1 MD11G1025500.v1.1 MD11G1025600.v1.1 MD11G1026200.v1.1 MD11G1026400.v1.1 MD11G1026500.v1.1 MD11G1026600.v1.1 MD11G1026800.v1.1 MD11G1027300.v1.1
prunus_persica Prupe.6G020400_v2.0.a1 Prupe.6G020500_v2.0.a1 Prupe.6G020600_v2.0.a1 Prupe.6G020700_v2.0.a1 Prupe.6G020800_v2.0.a1 Prupe.6G020900_v2.0.a1 Prupe.6G021000_v2.0.a1 Prupe.6G021500_v2.0.a1 Prupe.6G021600_v2.0.a1
pyrus_communis pycom03g01850 pycom03g01870 pycom03g01900 pycom03g01910 pycom11g01950 pycom11g01980 pycom11g01990 pycom11g02030 pycom11g02040
rosa_chinensis RchiOBHm_Chr5g0077411 RchiOBHm_Chr5g0077421 RchiOBHm_Chr5g0077571 RchiOBHm_Chr5g0077601 RchiOBHm_Chr5g0077621 RchiOBHm_Chr5g0077651 RchiOBHm_Chr5g0077661 RchiOBHm_Chr5g0077671 RchiOBHm_Chr5g0077701 RchiOBHm_Chr5g0077741 RchiOBHm_Chr5g0077791 RchiOBHm_Chr5g0077861 RchiOBHm_Chr5g0078871 RchiOBHm_Chr5g0078901 RchiOBHm_Chr5g0078941 RchiOBHm_Chr5g0079081 RchiOBHm_Chr5g0079091 RchiOBHm_Chr7g0233481
rosa_laevigata RLG00000036694 RLG00000036704 RLG00000036705 RLG00000036710 RLG00000036713 RLG00000036714 RLG00000036716 RLG00000036793 RLG00000036796 RLG00000036804 RLG00000036806
rosa_multiflora Rmu_co8130992.1_g000001 Rmu_sc0000029.1_g000037 Rmu_sc0002187.1_g000023 Rmu_sc0004168.1_g000001 Rmu_sc0004168.1_g000004 Rmu_sc0004168.1_g000018 Rmu_sc0004168.1_g000028 Rmu_sc0004168.1_g000033 Rmu_sc0004168.1_g000056 Rmu_sc0004277.1_g000009 Rmu_sc0004277.1_g000016 Rmu_sc0004277.1_g000018 Rmu_sc0004277.1_g000020 Rmu_sc0004277.1_g000084 Rmu_sc0004277.1_g000087 Rmu_sc0012487.1_g000001 Rmu_sc0012487.1_g000002
rosa_roxburghii Rroxscaffold_1G00003760 Rroxscaffold_1G00003780 Rroxscaffold_1G00004370 Rroxscaffold_1G00004400 Rroxscaffold_1G00004490 Rroxscaffold_1G00004510 Rroxscaffold_3G00227260 Rroxscaffold_5G00366480
rosa_rugosa Rorug05G0454800 Rorug05G0455700 Rorug05G0455900 Rorug05G0456100 Rorug05G0456300 Rorug05G0456700.1 Rorug05G0461800 Rorug05G0462100 Rorug07G0280900.1 Rorug07G0281000
rosa_samantha Rh5CG562200 Rh5DG543500 Rh5DG544200 Rh5DG544400 Rh5DG544500 Rh5DG544600 Rh5DG544700 Rh5DG544900 Rh5DG545200 Rh5DG549700 Rh7DG426000
rosa_wichuraiana Rw0G003130 Rw0G023780 Rw0G023790 Rw5G046780 Rw5G047330 Rw5G047350 Rw5G047370 Rw5G047390 Rw5G047420 Rw7G036050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 322
AcoI YGGCCR 1 cut(s) 808
AfeI AGCGCT 1 cut(s) 477
AfiI CCNNNNNNNGG 2 cut(s) 220, 390
AgsI TTSAA 6 cut(s) 16, 76, 441, 647, 745, 800
AluBI AGCT 4 cut(s) 87, 341, 682, 715
AluI AGCT 4 cut(s) 87, 341, 682, 715
Alw26I GTCTC 1 cut(s) 136
Ama87I CYCGRG 1 cut(s) 704
Aor51HI AGCGCT 1 cut(s) 477
AoxI GGCC 1 cut(s) 808
ApeKI GCWGC 1 cut(s) 338
Asp700I GAANNNNTTC 1 cut(s) 665
AspLEI GCGC 1 cut(s) 478
AspS9I GGNCC 1 cut(s) 234
AsuHPI GGTGA 2 cut(s) 373, 493
AvaI CYCGRG 1 cut(s) 704
AvaII GGWCC 1 cut(s) 234
BalI TGGCCA 1 cut(s) 810
BbvI GCAGC 1 cut(s) 350
BccI CCATC 1 cut(s) 182
BclI TGATCA 1 cut(s) 555
BcoDI GTCTC 1 cut(s) 136
BfaI CTAG 3 cut(s) 84, 563, 716
BfmI CTRYAG 1 cut(s) 135
BfoI RGCGCY 1 cut(s) 479
BisI GCNGC 1 cut(s) 339
BlsI GCNGC 1 cut(s) 340
Bme18I GGWCC 1 cut(s) 234
BmeT110I CYCGRG 1 cut(s) 704
BmgT120I GGNCC 1 cut(s) 234
BmsI GCATC 2 cut(s) 325, 767
BplI GAGNNNNNCTC 2 cut(s) 160, 192
BsaI GGTCTC 1 cut(s) 136
BsaXI ACNNNNNCTCC 2 cut(s) 385, 415
Bsc4I CCNNNNNNNGG 2 cut(s) 220, 390
Bse1I ACTGG 2 cut(s) 41, 55
Bse3DI GCAATG 1 cut(s) 777
BseGI GGATG 4 cut(s) 340, 371, 463, 558
BseLI CCNNNNNNNGG 2 cut(s) 220, 390
BseMI GCAATG 1 cut(s) 777
BseNI ACTGG 2 cut(s) 41, 55
BseRI GAGGAG 1 cut(s) 406
BseXI GCAGC 1 cut(s) 350
BshFI GGCC 1 cut(s) 810
BsiHKCI CYCGRG 1 cut(s) 704
BslFI GGGAC 1 cut(s) 6
BslI CCNNNNNNNGG 2 cut(s) 220, 390
BsmAI GTCTC 1 cut(s) 136
BsmFI GGGAC 1 cut(s) 6
BsnI GGCC 1 cut(s) 810
Bso31I GGTCTC 1 cut(s) 136
BsoBI CYCGRG 1 cut(s) 704
Bsp143I GATC 2 cut(s) 450, 555
BspANI GGCC 1 cut(s) 810
BspQI GCTCTTC 1 cut(s) 705
BspTNI GGTCTC 1 cut(s) 136
BsrDI GCAATG 1 cut(s) 777
BsrI ACTGG 2 cut(s) 41, 55
BssMI GATC 2 cut(s) 450, 555
BssNAI GTATAC 1 cut(s) 323
Bst1107I GTATAC 1 cut(s) 323
Bst4CI ACNGT 2 cut(s) 314, 739
Bst6I CTCTTC 2 cut(s) 11, 705
BstF5I GGATG 4 cut(s) 340, 371, 463, 558
BstH2I RGCGCY 1 cut(s) 479
BstHHI GCGC 1 cut(s) 478
BstKTI GATC 2 cut(s) 453, 558
BstMAI GTCTC 1 cut(s) 136
BstMBI GATC 2 cut(s) 450, 555
BstNSI RCATGY 1 cut(s) 303
BstSFI CTRYAG 1 cut(s) 135
BstV1I GCAGC 1 cut(s) 350
BstZ17I GTATAC 1 cut(s) 323
BsuRI GGCC 1 cut(s) 810
BtsCI GGATG 4 cut(s) 340, 371, 463, 558
BtsI GCAGTG 1 cut(s) 558
BtsIMutI CAGTG 1 cut(s) 558
CfoI GCGC 1 cut(s) 478
Cfr13I GGNCC 1 cut(s) 234
CviAII CATG 5 cut(s) 300, 326, 614, 652, 676
CviJI RGCY 8 cut(s) 87, 224, 341, 538, 682, 692, 715, 810
CviKI_1 RGCY 8 cut(s) 87, 224, 341, 538, 682, 692, 715, 810
DpnI GATC 2 cut(s) 452, 557
DpnII GATC 2 cut(s) 450, 555
EaeI YGGCCR 1 cut(s) 808
Eam1104I CTCTTC 2 cut(s) 11, 705
EarI CTCTTC 2 cut(s) 11, 705
Eco31I GGTCTC 1 cut(s) 136
Eco47I GGWCC 1 cut(s) 234
Eco47III AGCGCT 1 cut(s) 477
Eco88I CYCGRG 1 cut(s) 704
FaeI CATG 5 cut(s) 303, 329, 617, 655, 679
FaqI GGGAC 1 cut(s) 6
FatI CATG 5 cut(s) 299, 325, 613, 651, 675
FbaI TGATCA 1 cut(s) 555
FblI GTMKAC 1 cut(s) 322
Fnu4HI GCNGC 1 cut(s) 339
FokI GGATG 4 cut(s) 347, 358, 470, 545
Fsp4HI GCNGC 1 cut(s) 339
FspBI CTAG 3 cut(s) 84, 563, 716
GlaI GCGC 1 cut(s) 477
GluI GCNGC 1 cut(s) 339
HaeII RGCGCY 1 cut(s) 479
HaeIII GGCC 1 cut(s) 810
HhaI GCGC 1 cut(s) 478
Hin1II CATG 5 cut(s) 303, 329, 617, 655, 679
Hin6I GCGC 1 cut(s) 476
HinP1I GCGC 1 cut(s) 476
HinfI GANTC 5 cut(s) 19, 227, 625, 655, 702
HphI GGTGA 2 cut(s) 373, 493
Hpy166II GTNNAC 3 cut(s) 237, 323, 381
Hpy188I TCNGA 4 cut(s) 150, 365, 660, 763
Hpy188III TCNNGA 2 cut(s) 179, 278
Hpy8I GTNNAC 3 cut(s) 237, 323, 381
HpyAV CCTTC 1 cut(s) 256
HpyCH4III ACNGT 2 cut(s) 314, 739
HpyCH4V TGCA 5 cut(s) 267, 299, 338, 617, 734
Hsp92II CATG 5 cut(s) 303, 329, 617, 655, 679
HspAI GCGC 1 cut(s) 476
Ksp22I TGATCA 1 cut(s) 555
Kzo9I GATC 2 cut(s) 450, 555
LguI GCTCTTC 1 cut(s) 705
LmnI GCTCC 2 cut(s) 548, 679
Lsp1109I GCAGC 1 cut(s) 350
LweI GCATC 2 cut(s) 325, 767
MaeI CTAG 3 cut(s) 84, 563, 716
MaeIII GTNAC 1 cut(s) 367
MalI GATC 2 cut(s) 452, 557
MboI GATC 2 cut(s) 450, 555
MboII GAAGA 5 cut(s) 28, 64, 433, 460, 722
MlsI TGGCCA 1 cut(s) 810
MluCI AATT 5 cut(s) 4, 25, 42, 273, 789
MluNI TGGCCA 1 cut(s) 810
MlyI GAGTC 2 cut(s) 28, 696
MmeI TCCRAC 1 cut(s) 398
MnlI CCTC 9 cut(s) 107, 192, 264, 325, 371, 384, 389, 621, 700
Mox20I TGGCCA 1 cut(s) 810
MroXI GAANNNNTTC 1 cut(s) 665
MscI TGGCCA 1 cut(s) 810
MseI TTAA 8 cut(s) 41, 47, 309, 465, 569, 606, 633, 792
MslI CAYNNNNRTG 2 cut(s) 386, 674
Msp20I TGGCCA 1 cut(s) 810
NdeII GATC 2 cut(s) 450, 555
NlaIII CATG 5 cut(s) 303, 329, 617, 655, 679
NmeAIII GCCGAG 1 cut(s) 514
NspI RCATGY 1 cut(s) 303
PaeR7I CTCGAG 1 cut(s) 704
PciSI GCTCTTC 1 cut(s) 705
PdmI GAANNNNTTC 1 cut(s) 665
PfeI GAWTC 3 cut(s) 227, 625, 655
PkrI GCNGC 1 cut(s) 340
PleI GAGTC 2 cut(s) 27, 696
PpsI GAGTC 2 cut(s) 27, 696
PspPI GGNCC 1 cut(s) 234
PspXI VCTCGAGB 1 cut(s) 704
PsrI GAACNNNNNNTAC 2 cut(s) 129, 161
RseI CAYNNNNRTG 2 cut(s) 386, 674
SapI GCTCTTC 1 cut(s) 705
SaqAI TTAA 8 cut(s) 41, 47, 309, 465, 569, 606, 633, 792
SatI GCNGC 1 cut(s) 339
Sau3AI GATC 2 cut(s) 450, 555
Sau96I GGNCC 1 cut(s) 234
SchI GAGTC 2 cut(s) 28, 696
SfaNI GCATC 2 cut(s) 325, 767
SfcI CTRYAG 1 cut(s) 135
Sfr274I CTCGAG 1 cut(s) 704
SinI GGWCC 1 cut(s) 234
SlaI CTCGAG 1 cut(s) 704
SmiMI CAYNNNNRTG 2 cut(s) 386, 674
SmlI CTYRAG 1 cut(s) 704
SmoI CTYRAG 1 cut(s) 704
Sse9I AATT 5 cut(s) 4, 25, 42, 273, 789
SspI AATATT 1 cut(s) 262
SspMI CTAG 3 cut(s) 84, 563, 716
TaaI ACNGT 2 cut(s) 314, 739
TaqI TCGA 3 cut(s) 529, 628, 705
TasI AATT 5 cut(s) 4, 25, 42, 273, 789
TfiI GAWTC 3 cut(s) 227, 625, 655
Tru1I TTAA 8 cut(s) 41, 47, 309, 465, 569, 606, 633, 792
Tru9I TTAA 8 cut(s) 41, 47, 309, 465, 569, 606, 633, 792
TscAI CASTG 1 cut(s) 558
TseI GCWGC 1 cut(s) 338
TspDTI ATGAA 5 cut(s) 17, 238, 664, 668, 766
TspGWI ACGGA 2 cut(s) 126, 714
TspRI CASTG 1 cut(s) 558
VpaK11BI GGWCC 1 cut(s) 234
XceI RCATGY 1 cut(s) 303
XhoI CTCGAG 1 cut(s) 704
XmiI GTMKAC 1 cut(s) 322
XmnI GAANNNNTTC 1 cut(s) 665
XspI CTAG 3 cut(s) 84, 563, 716
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.