Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0000365

Physical Location & Seq

Genomic Coordinates Reverse (-)

853421 .. 855430

Gene Structure 2010 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1008400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGGAATCGAGTTACACAGTCTTAAACGGTGAAGGCTCACTCGCAATGGTTCAGGCAGGACTAGACGTAGTACCTCTCAAATGCGCACCCATTGTGTCGTCCTATAACGACAAGATCCGCCCTCTTCTGGATGCGGTAGACAAGTTACGCAGCTTGAAGGTGATGGATGAAGGCATTCAGCTGCCAACGATTGTGGTGGTCGGAGACCAGTCATCCGGGAAGTCTAGCGTGCTCGAATCCTTGGCCGGCATCAGCCTACCTCGGGGCCAAGGCATCTGCACGAGAGTGCCTCTTATTATGAGGCTGGAACACCACTCGAGTCCTCAGCCTGAACTTTCCTTGGAGTACAATGGCAGAGTTGATCGTACTGATGAAGAAAATATCGCCAAAGATATTGTGAAAGCGACTAATTCTATTGCGGGGGGAGGTAAGGGAATTTCAAACATGCCACTTACTTTGTTGGTGAAGAAGAATGGGGTTCCGGATCTGACTATGGTTGATCTTCCGGGAATCACAAGGGTTCCAGTCCATGGCCAACCTGAAAATATCTATGATCAGATCAAAGATATGATCATGGAGTATATTAAGCCGGAGGAAAGTATTATTCTGAATGTATTGTCTGCTACGGTGGATTTTACTACTTGTGAGTCAATCCGGATGTCACAAAGTGTAGATAAAACTGGTGAGAGGACGCTCGCTGTGGTTACGAAAGTGGACAAGGCACCGGAAGGACTACTTGAGAAGGTCACTGGAGATGATGTAAACATTGGTCTTGGTTATGTCTGTGTAAGGAACAGGATTGGTGACGAAACTTATGAGGAGGCAGCGGTGATGGCTCATGAACTATTTCAAACCCATCCTCTGCTTTCGAAGATTGACAAGTCCATTGTCGGCATTCCAGTTTTAGCACAGAAGCTGGTCCAAATTCAAGCAAACAGCATAGCAAGAAATATACCTGAGATAGTGAAGAAGATCAATGACAGGCTGAACTTCTGCATTATGATGCTGAACAAAATGCCAAAGAGTCTTTCGTCTGTTGCCGAGGCAATGACGGCCTTTATGCAAATCATTGGCTTGGCTAAGGAATCGCTTAGGAAGATTCTTTTGAGAGGAGAATTTGAGGAGTACGCCGAAGATAATCGCATGCACTGCACTGCTAGATTGGTTGAGATGCTCAACCAGTACTCGGATGAACTTCACAGATGTGCTGAAACTGATGCAAAGAGCAACTTCTTGATGGAGGAGATCAAGATCTTGGAGGAGGCCAAAGGTATTTCACTTCCGAACTTCCTTCCACGCAATGCTTTCCTCATTATCTTGCAGGCAAAAGTGAATGAAATTTCGAGTATTCCGATTGCATTTGAGGAAAAAGTGTGGAACTACATTGAAGAGGTGGTTATTTCTGTGTTGATGCATTATACGGATAACTATCATCAGCTGCAGTTATCAGCAAGGCGTGCCGGCCATAGTCTAATGGCCAAGATGAAGGAGAGATCAATCAAGTGGATGCTGGAGCTTGTAGAGATGGAAAAGCTGACAGATTATACATGTGATGGTGATTATGTTTCCGAATGGAACAAGTTGATGGCTAGTCAAAACGAATTCATTCATGGAGTCTTAACTGATGAGAAGAAACCTTCTATCATAGATATAGTAGGCATCGGGGAAGTGGAAGTCGGTGTTCTGAGGAAGTACCCGCATGTGTTAGCTCAAGCTTATGACCTTAAAATGAGAATGATTGCCTATTGGAAGGTTGTTTTGAGGAGGCTTGTGGACTCCATGGCATTGCACTTGCAGCTGTCTGTTTTCAACCTTGTGAACAAAGAGATGGAAGCTGAGATTGTGAAGGAGTTGATGGGACCTTACGGTGGGGGAATTGAGAGGATGTTGGAGGAGTCACCGGCAGTAGCAGTAAAGCGTGAGAAGCTTAACAGAAGCATAAAAAAACTGAGGGATTCGAAGGACGTGGTGGCCAAGATTATGGACAGCATTATCACTTATGGTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000266 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007005 GO:0008017 GO:0008092 GO:0008150 GO:0009987 GO:0015631 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0044424 GO:0044464 GO:0048285 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko04139 ko04214 ko04217 ko04621 ko04668 ko05162 ko05164 ko05165 map04139 map04214 map04217 map04621 map04668 map05162 map05164 map05165

Pfam Domains

Protein Families

Dynamin_M Dynamin_N GED

Protein Analysis

670

Amino Acids

74.86

Weight (kDa)

5.6

Isoelectric Point (pI)

40.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	64 - 238	2.7e-41	Dynamin family
Dynamin_M	PF01031	245 - 529	5.2e-59	Dynamin central region
GED	PF02212	571 - 659	5.4e-10	Dynamin GTPase effector domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000365)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60500 AT1G60530
fragaria_vesca	FvH4_4g34670 FvH4_7g03430 FvH4_7g03440 FvH4_7g03780
malus_domestica	MD02G1282600.v1.1 MD02G1282700.v1.1 MD02G1282900.v1.1 MD14G1008400.v1.1 MD14G1008800.v1.1 MD14G1008900.v1.1 MD14G1009000.v1.1 MD14G1009200.v1.1 MD14G1009300.v1.1
prunus_persica	Prupe.2G039500_v2.0.a1 Prupe.2G039600_v2.0.a1 Prupe.2G039800_v2.0.a1 Prupe.2G039900_v2.0.a1 Prupe.2G040000_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015300_v2.0.a1
pyrus_communis	pycom02g24110 pycom02g24120 pycom14g00720 pycom14g00740 pycom14g00780
rosa_chinensis	RchiOBHm_Chr1g0325781 RchiOBHm_Chr1g0326171 RchiOBHm_Chr1g0326211 RchiOBHm_Chr1g0327001 RchiOBHm_Chr1g0327051 RchiOBHm_Chr1g0327071 RchiOBHm_Chr1g0327091 RchiOBHm_Chr1g0327111 RchiOBHm_Chr2g0127731 RchiOBHm_Chr2g0127741 RchiOBHm_Chr4g0444021
rosa_laevigata	RLG00000005864 RLG00000005866 RLG00000030044 RLG00000030045 RLG00000030047 RLG00000030048 RLG00000030083 RLG00000030106
rosa_multiflora	Rmu_sc0000795.1_g000013 Rmu_sc0000795.1_g000046 Rmu_sc0000795.1_g000049 Rmu_sc0004240.1_g000005 Rmu_sc0004240.1_g000006 Rmu_sc0006009.1_g000005 Rmu_sc0015522.1_g000011 Rmu_sc0025852.1_g000001
rosa_roxburghii	Rroxscaffold_4G00323340 Rroxscaffold_4G00323420 Rroxscaffold_4G00323950 Rroxscaffold_4G00324390 Rroxscaffold_5G00384590
rosa_rugosa	Rorug01G0054400 Rorug01G0057700 Rorug01G0062800 Rorug01G0062900 Rorug01G0063200 Rorug01G0063300 Rorug04G0349000
rosa_samantha	Rh1AG069900 Rh1AG070200 Rh1AG070400 Rh1AG070700 Rh1AG071000 Rh1AG074600 Rh1AG079800 Rh1AG080000 Rh1AG080600 Rh1BG057600 Rh1BG060000 Rh1BG064000 Rh1CG070400 Rh1CG073100 Rh1CG077500 Rh1CG077600 Rh1CG078000 Rh1CG078600 Rh1DG075100 Rh1DG079900 Rh1DG084000 Rh1DG084100 Rh1DG084400 Rh1DG084900 Rh1DG085000 Rh2BG332700 Rh4AG409800 Rh4BG420900 Rh4CG435200 Rh4DG416100
rosa_wichuraiana	Rw1G005780 Rw1G005990 Rw1G006330 Rw1G006340 Rw1G006380 Rw1G006390 Rw2G026260 Rw4G035200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	85
AccB1I	GGYRCC	1 cut(s)	721
AccB7I	CCANNNNNTGG	1 cut(s)	530
AccI	GTMKAC	1 cut(s)	138
AccIII	TCCGGA	2 cut(s)	481, 654
AciI	CCGC	5 cut(s)	118, 134, 419, 827, 1697
AclWI	GGATC	2 cut(s)	109, 492
AcoI	YGGCCR	5 cut(s)	243, 532, 1462, 1476, 1971
AcsI	RAATTY	5 cut(s)	435, 924, 1115, 1338, 1601
AdeI	CACNNNGTG	1 cut(s)	668
AfaI	GTAC	6 cut(s)	72, 347, 367, 1127, 1184, 1694
AfiI	CCNNNNNNNGG	5 cut(s)	127, 262, 530, 1186, 1868
AflIII	ACRYGT	1 cut(s)	1547
AgsI	TTSAA	6 cut(s)	157, 441, 851, 929, 1388, 1810
AjiI	CACGTC	1 cut(s)	1966
AjuI	GAANNNNNNNTTGG	2 cut(s)	1012, 1044
AleI	CACNNNNGTG	2 cut(s)	284, 1203
Alw21I	GWGCWC	1 cut(s)	234
Alw26I	GTCTC	1 cut(s)	198
AlwI	GGATC	2 cut(s)	109, 492
AlwNI	CAGNNNCTG	1 cut(s)	916
Ama87I	CYCGRG	2 cut(s)	261, 316
Aor13HI	TCCGGA	2 cut(s)	481, 654
AoxI	GGCC	8 cut(s)	243, 265, 532, 1053, 1263, 1462, 1476, 1971
ApeKI	GCWGC	5 cut(s)	150, 181, 824, 1438, 1795
ApoI	RAATTY	5 cut(s)	435, 924, 1115, 1338, 1601
Asp700I	GAANNNNTTC	3 cut(s)	174, 846, 1605
AspLEI	GCGC	1 cut(s)	86
AspS9I	GGNCC	3 cut(s)	265, 919, 1859
AsuC2I	CCSGG	2 cut(s)	217, 507
AsuHPI	GGTGA	8 cut(s)	41, 172, 475, 695, 815, 841, 1568, 1890
AsuII	TTCGAA	2 cut(s)	869, 1958
AvaI	CYCGRG	2 cut(s)	261, 316
AvaII	GGWCC	2 cut(s)	919, 1859
BalI	TGGCCA	3 cut(s)	534, 1478, 1973
BanI	GGYRCC	1 cut(s)	721
BauI	CACGAG	1 cut(s)	280
Bbv12I	GWGCWC	1 cut(s)	234
BbvCI	CCTCAGC	1 cut(s)	324
BbvI	GCAGC	5 cut(s)	162, 168, 836, 1425, 1807
BccI	CCATC	9 cut(s)	157, 826, 864, 1231, 1519, 1547, 1579, 1822, 1849
BceAI	ACGGC	1 cut(s)	1068
BclI	TGATCA	2 cut(s)	553, 570
BcnI	CCSGG	2 cut(s)	217, 507
BcoDI	GTCTC	1 cut(s)	198
BfaI	CTAG	4 cut(s)	62, 225, 1158, 1590
BfmI	CTRYAG	1 cut(s)	1439
BglII	AGATCT	1 cut(s)	1251
BisI	GCNGC	5 cut(s)	151, 182, 825, 1439, 1796
BlsI	GCNGC	5 cut(s)	152, 183, 826, 1440, 1797
BmcAI	AGTACT	1 cut(s)	1184
Bme1390I	CCNGG	2 cut(s)	217, 507
Bme18I	GGWCC	2 cut(s)	919, 1859
BmeT110I	CYCGRG	2 cut(s)	261, 316
BmgBI	CACGTC	1 cut(s)	1966
BmgT120I	GGNCC	3 cut(s)	265, 919, 1859
BmiI	GGNNCC	5 cut(s)	266, 480, 522, 723, 1860
BmrFI	CCNGG	2 cut(s)	217, 507
BmsI	GCATC	9 cut(s)	121, 258, 282, 993, 1161, 1207, 1401, 1497, 1668
BplI	GAGNNNNNCTC	2 cut(s)	274, 306
BpmI	CTGGAG	2 cut(s)	771, 1532
Bpu10I	CCTNAGC	3 cut(s)	324, 1080, 1091
Bpu14I	TTCGAA	2 cut(s)	869, 1958
BpuEI	CTTGAG	2 cut(s)	758, 1695
BpuMI	CCSGG	2 cut(s)	217, 507
BsaBI	GATNNNNATC	2 cut(s)	1250, 1428
BsaI	GGTCTC	1 cut(s)	198
BsaJI	CCNNGG	7 cut(s)	240, 260, 268, 339, 529, 1041, 1779
BsaWI	WCCGGW	3 cut(s)	481, 654, 724
BsaXI	ACNNNNNCTCC	2 cut(s)	744, 774
Bsc4I	CCNNNNNNNGG	5 cut(s)	127, 262, 530, 1186, 1868
Bse118I	RCCGGY	3 cut(s)	245, 1460, 1900
Bse1I	ACTGG	6 cut(s)	208, 524, 685, 754, 899, 1180
Bse3DI	GCAATG	4 cut(s)	51, 1053, 1306, 1784
Bse8I	GATNNNNATC	2 cut(s)	1250, 1428
BseAI	TCCGGA	2 cut(s)	481, 654
BseDI	CCNNGG	7 cut(s)	240, 260, 268, 339, 529, 1041, 1779
BseGI	GGATG	8 cut(s)	136, 172, 212, 663, 856, 1195, 1512, 1890
BseJI	GATNNNNATC	2 cut(s)	1250, 1428
BseLI	CCNNNNNNNGG	5 cut(s)	127, 262, 530, 1186, 1868
BseMI	GCAATG	4 cut(s)	51, 1053, 1306, 1784
BseMII	CTCAG	5 cut(s)	338, 948, 1676, 1827, 1940
BseNI	ACTGG	6 cut(s)	208, 524, 685, 754, 899, 1180
BseRI	GAGGAG	7 cut(s)	833, 1125, 1136, 1256, 1274, 1777, 1907
BseXI	GCAGC	5 cut(s)	162, 168, 836, 1425, 1807
BsgI	GTGCAG	2 cut(s)	262, 1135
BshFI	GGCC	8 cut(s)	245, 267, 534, 1055, 1265, 1464, 1478, 1973
BshNI	GGYRCC	1 cut(s)	721
BsiHKAI	GWGCWC	1 cut(s)	234
BsiHKCI	CYCGRG	2 cut(s)	261, 316
BsiSI	CCGG	9 cut(s)	216, 246, 482, 506, 590, 655, 725, 1461, 1901
BslFI	GGGAC	1 cut(s)	1872
BslI	CCNNNNNNNGG	5 cut(s)	127, 262, 530, 1186, 1868
BsmAI	GTCTC	1 cut(s)	198
BsmFI	GGGAC	1 cut(s)	1872
BsmI	GAATGC	2 cut(s)	174, 894
BsnI	GGCC	8 cut(s)	245, 267, 534, 1055, 1265, 1464, 1478, 1973
Bso31I	GGTCTC	1 cut(s)	198
BsoBI	CYCGRG	2 cut(s)	261, 316
Bsp119I	TTCGAA	2 cut(s)	869, 1958
Bsp1286I	GDGCHC	1 cut(s)	234
Bsp13I	TCCGGA	2 cut(s)	481, 654
Bsp19I	CCATGG	2 cut(s)	529, 1779
BspACI	CCGC	5 cut(s)	118, 134, 419, 827, 1697
BspANI	GGCC	8 cut(s)	245, 267, 534, 1055, 1265, 1464, 1478, 1973
BspCNI	CTCAG	5 cut(s)	337, 949, 1677, 1828, 1941
BspEI	TCCGGA	2 cut(s)	481, 654
BspHI	TCATGA	1 cut(s)	838
BspLI	GGNNCC	5 cut(s)	266, 480, 522, 723, 1860
BspMAI	CTGCAG	1 cut(s)	1443
BspPI	GGATC	2 cut(s)	109, 492
BspT104I	TTCGAA	2 cut(s)	869, 1958
BspT107I	GGYRCC	1 cut(s)	721
BspTNI	GGTCTC	1 cut(s)	198
BsrDI	GCAATG	4 cut(s)	51, 1053, 1306, 1784
BsrFI	RCCGGY	3 cut(s)	245, 1460, 1900
BsrI	ACTGG	6 cut(s)	208, 524, 685, 754, 899, 1180
BssAI	RCCGGY	3 cut(s)	245, 1460, 1900
BssECI	CCNNGG	7 cut(s)	240, 260, 268, 339, 529, 1041, 1779
BssSI	CACGAG	1 cut(s)	280
BssT1I	CCWWGG	5 cut(s)	240, 268, 339, 529, 1779
Bst2BI	CACGAG	1 cut(s)	280
Bst4CI	ACNGT	4 cut(s)	19, 29, 628, 1868
Bst6I	CTCTTC	2 cut(s)	129, 1383
BstAPI	GCANNNNNTGC	2 cut(s)	1149, 1457
BstBI	TTCGAA	2 cut(s)	869, 1958
BstC8I	GCNNGC	7 cut(s)	230, 247, 696, 1145, 1323, 1458, 1462
BstDEI	CTNAG	7 cut(s)	324, 957, 1080, 1091, 1685, 1836, 1949
BstDSI	CCRYGG	2 cut(s)	529, 1779
BstF5I	GGATG	8 cut(s)	136, 172, 212, 663, 856, 1195, 1512, 1890
BstHHI	GCGC	1 cut(s)	86
BstMAI	GTCTC	1 cut(s)	198
BstMWI	GCNNNNNNNGC	6 cut(s)	833, 1052, 1149, 1457, 1795, 1924
BstNSI	RCATGY	4 cut(s)	448, 1147, 1551, 1703
BstSCI	CCNGG	2 cut(s)	215, 505
BstSFI	CTRYAG	1 cut(s)	1439
BstV1I	GCAGC	5 cut(s)	162, 168, 836, 1425, 1807
BstX2I	RGATCY	3 cut(s)	114, 484, 1251
BstXI	CCANNNNNNTGG	1 cut(s)	1981
BstYI	RGATCY	3 cut(s)	114, 484, 1251
BsuRI	GGCC	8 cut(s)	245, 267, 534, 1055, 1265, 1464, 1478, 1973
BtgI	CCRYGG	2 cut(s)	529, 1779
BtrI	CACGTC	1 cut(s)	1966
BtsCI	GGATG	8 cut(s)	136, 172, 212, 663, 856, 1195, 1512, 1890
BtsI	GCAGTG	2 cut(s)	1147, 1152
BtsIMutI	CAGTG	3 cut(s)	747, 1147, 1152
Cac8I	GCNNGC	7 cut(s)	230, 247, 696, 1145, 1323, 1458, 1462
CaiI	CAGNNNCTG	1 cut(s)	916
CciI	TCATGA	1 cut(s)	838
CfoI	GCGC	1 cut(s)	86
Cfr10I	RCCGGY	3 cut(s)	245, 1460, 1900
Cfr13I	GGNCC	3 cut(s)	265, 919, 1859
CseI	GACGC	1 cut(s)	700
Csp6I	GTAC	6 cut(s)	71, 346, 366, 1126, 1183, 1693
CspCI	CAANNNNNGTGG	4 cut(s)	174, 209, 438, 473
CviAII	CATG	9 cut(s)	445, 530, 574, 839, 1144, 1548, 1610, 1700, 1780
CviQI	GTAC	6 cut(s)	71, 346, 366, 1126, 1183, 1693
DdeI	CTNAG	7 cut(s)	324, 957, 1080, 1091, 1685, 1836, 1949
DraIII	CACNNNGTG	1 cut(s)	668
EaeI	YGGCCR	5 cut(s)	243, 532, 1462, 1476, 1971
Eam1104I	CTCTTC	2 cut(s)	129, 1383
EarI	CTCTTC	2 cut(s)	129, 1383
EciI	GGCGGA	1 cut(s)	107
Eco130I	CCWWGG	5 cut(s)	240, 268, 339, 529, 1779
Eco31I	GGTCTC	1 cut(s)	198
Eco47I	GGWCC	2 cut(s)	919, 1859
Eco88I	CYCGRG	2 cut(s)	261, 316
EcoO109I	RGGNCCY	1 cut(s)	1859
EcoRI	GAATTC	1 cut(s)	1601
EcoT14I	CCWWGG	5 cut(s)	240, 268, 339, 529, 1779
EcoT22I	ATGCAT	1 cut(s)	1416
ErhI	CCWWGG	5 cut(s)	240, 268, 339, 529, 1779
FaeI	CATG	9 cut(s)	448, 533, 577, 842, 1147, 1551, 1613, 1703, 1783
FalI	AAGNNNNNCTT	4 cut(s)	720, 752, 1214, 1246
FaqI	GGGAC	1 cut(s)	1872
FatI	CATG	9 cut(s)	444, 529, 573, 838, 1143, 1547, 1609, 1699, 1779
FauI	CCCGC	2 cut(s)	412, 1704
FbaI	TGATCA	2 cut(s)	553, 570
FblI	GTMKAC	1 cut(s)	138
Fnu4HI	GCNGC	5 cut(s)	151, 182, 825, 1439, 1796
FokI	GGATG	8 cut(s)	143, 179, 199, 670, 843, 1202, 1519, 1897
Fsp4HI	GCNGC	5 cut(s)	151, 182, 825, 1439, 1796
FspAI	RTGCGCAY	1 cut(s)	85
FspBI	CTAG	4 cut(s)	62, 225, 1158, 1590
FspI	TGCGCA	1 cut(s)	85
GlaI	GCGC	1 cut(s)	85
GluI	GCNGC	5 cut(s)	151, 182, 825, 1439, 1796
GsuI	CTGGAG	2 cut(s)	771, 1532
HaeIII	GGCC	8 cut(s)	245, 267, 534, 1055, 1265, 1464, 1478, 1973
HapII	CCGG	9 cut(s)	216, 246, 482, 506, 590, 655, 725, 1461, 1901
HgaI	GACGC	1 cut(s)	700
HhaI	GCGC	1 cut(s)	86
Hin1II	CATG	9 cut(s)	448, 533, 577, 842, 1147, 1551, 1613, 1703, 1783
Hin6I	GCGC	1 cut(s)	84
HinP1I	GCGC	1 cut(s)	84
HindIII	AAGCTT	2 cut(s)	1713, 1925
HpaII	CCGG	9 cut(s)	216, 246, 482, 506, 590, 655, 725, 1461, 1901
HphI	GGTGA	8 cut(s)	41, 172, 475, 695, 815, 841, 1568, 1890
Hpy166II	GTNNAC	5 cut(s)	139, 715, 763, 1774, 1819
Hpy188I	TCNGA	9 cut(s)	203, 489, 558, 609, 1189, 1284, 1353, 1570, 1686
Hpy188III	TCNNGA	6 cut(s)	128, 482, 655, 839, 1234, 1249
Hpy8I	GTNNAC	5 cut(s)	139, 715, 763, 1774, 1819
HpyCH4III	ACNGT	4 cut(s)	19, 29, 628, 1868
HpyCH4IV	ACGT	2 cut(s)	66, 1965
HpyF10VI	GCNNNNNNNGC	6 cut(s)	833, 1052, 1149, 1457, 1795, 1924
HpyF3I	CTNAG	7 cut(s)	324, 957, 1080, 1091, 1685, 1836, 1949
HpySE526I	ACGT	2 cut(s)	66, 1965
Hsp92II	CATG	9 cut(s)	448, 533, 577, 842, 1147, 1551, 1613, 1703, 1783
HspAI	GCGC	1 cut(s)	84
Kpn2I	TCCGGA	2 cut(s)	481, 654
KroI	GCCGGC	2 cut(s)	245, 1460
KroNI	GCCGGC	2 cut(s)	247, 1462
Ksp22I	TGATCA	2 cut(s)	553, 570
LmnI	GCTCC	1 cut(s)	1513
Lsp1109I	GCAGC	5 cut(s)	162, 168, 836, 1425, 1807
LweI	GCATC	9 cut(s)	121, 258, 282, 993, 1161, 1207, 1401, 1497, 1668
MaeI	CTAG	4 cut(s)	62, 225, 1158, 1590
MaeII	ACGT	2 cut(s)	66, 1965
MaeIII	GTNAC	7 cut(s)	11, 144, 660, 703, 745, 803, 1896
MflI	RGATCY	3 cut(s)	114, 484, 1251
MhlI	GDGCHC	1 cut(s)	234
MlsI	TGGCCA	3 cut(s)	534, 1478, 1973
MluCI	AATT	7 cut(s)	409, 435, 924, 1115, 1338, 1601, 1875
MluNI	TGGCCA	3 cut(s)	534, 1478, 1973
MlyI	GAGTC	6 cut(s)	328, 656, 1033, 1623, 1769, 1904
MmeI	TCCRAC	2 cut(s)	181, 1869
Mox20I	TGGCCA	3 cut(s)	534, 1478, 1973
Mph1103I	ATGCAT	1 cut(s)	1416
MroI	TCCGGA	2 cut(s)	481, 654
MroNI	GCCGGC	2 cut(s)	245, 1460
MroXI	GAANNNNTTC	3 cut(s)	174, 846, 1605
MscI	TGGCCA	3 cut(s)	534, 1478, 1973
MseI	TTAA	6 cut(s)	23, 585, 1619, 1725, 1929, 2008
MslI	CAYNNNNRTG	3 cut(s)	284, 1001, 1203
Msp20I	TGGCCA	3 cut(s)	534, 1478, 1973
MspA1I	CMGCKG	4 cut(s)	181, 827, 1438, 1798
MspI	CCGG	9 cut(s)	216, 246, 482, 506, 590, 655, 725, 1461, 1901
MspR9I	CCNGG	2 cut(s)	217, 507
Mva1269I	GAATGC	2 cut(s)	174, 894
MwoI	GCNNNNNNNGC	6 cut(s)	833, 1052, 1149, 1457, 1795, 1924
NaeI	GCCGGC	2 cut(s)	247, 1462
NciI	CCSGG	2 cut(s)	217, 507
NcoI	CCATGG	2 cut(s)	529, 1779
NgoMIV	GCCGGC	2 cut(s)	245, 1460
NlaIII	CATG	9 cut(s)	448, 533, 577, 842, 1147, 1551, 1613, 1703, 1783
NlaIV	GGNNCC	5 cut(s)	266, 480, 522, 723, 1860
NmeAIII	GCCGAG	1 cut(s)	1066
NmuCI	GTSAC	4 cut(s)	660, 745, 803, 1896
NsbI	TGCGCA	1 cut(s)	85
NsiI	ATGCAT	1 cut(s)	1416
NspI	RCATGY	4 cut(s)	448, 1147, 1551, 1703
NspV	TTCGAA	2 cut(s)	869, 1958
OliI	CACNNNNGTG	2 cut(s)	284, 1203
PaeI	GCATGC	1 cut(s)	1147
PaeR7I	CTCGAG	1 cut(s)	316
PagI	TCATGA	1 cut(s)	838
PciI	ACATGT	1 cut(s)	1547
PcsI	WCGNNNNNNNCGW	1 cut(s)	1349
PctI	GAATGC	2 cut(s)	174, 894
PdiI	GCCGGC	2 cut(s)	247, 1462
PdmI	GAANNNNTTC	3 cut(s)	174, 846, 1605
PfeI	GAWTC	6 cut(s)	5, 236, 510, 1085, 1099, 1955
PflMI	CCANNNNNTGG	1 cut(s)	530
PfoI	TCCNGGA	2 cut(s)	215, 505
PkrI	GCNGC	5 cut(s)	152, 183, 826, 1440, 1797
PleI	GAGTC	6 cut(s)	327, 655, 1032, 1622, 1769, 1903
PpsI	GAGTC	6 cut(s)	327, 655, 1032, 1622, 1769, 1903
PpuMI	RGGWCCY	1 cut(s)	1859
PscI	ACATGT	1 cut(s)	1547
Psp5II	RGGWCCY	1 cut(s)	1859
PspN4I	GGNNCC	5 cut(s)	266, 480, 522, 723, 1860
PspPI	GGNCC	3 cut(s)	265, 919, 1859
PspPPI	RGGWCCY	1 cut(s)	1859
PspXI	VCTCGAGB	1 cut(s)	316
PstI	CTGCAG	1 cut(s)	1443
PstNI	CAGNNNCTG	1 cut(s)	916
PsuI	RGATCY	3 cut(s)	114, 484, 1251
PvuII	CAGCTG	3 cut(s)	181, 1438, 1798
RsaI	GTAC	6 cut(s)	72, 347, 367, 1127, 1184, 1694
RsaNI	GTAC	6 cut(s)	71, 346, 366, 1126, 1183, 1693
RseI	CAYNNNNRTG	3 cut(s)	284, 1001, 1203
SaqAI	TTAA	6 cut(s)	23, 585, 1619, 1725, 1929, 2008
SatI	GCNGC	5 cut(s)	151, 182, 825, 1439, 1796
Sau96I	GGNCC	3 cut(s)	265, 919, 1859
ScaI	AGTACT	1 cut(s)	1184
SchI	GAGTC	6 cut(s)	328, 656, 1033, 1623, 1769, 1904
ScrFI	CCNGG	2 cut(s)	217, 507
SduI	GDGCHC	1 cut(s)	234
SfaNI	GCATC	9 cut(s)	121, 258, 282, 993, 1161, 1207, 1401, 1497, 1668
SfcI	CTRYAG	1 cut(s)	1439
Sfr274I	CTCGAG	1 cut(s)	316
SfuI	TTCGAA	2 cut(s)	869, 1958
SinI	GGWCC	2 cut(s)	919, 1859
SlaI	CTCGAG	1 cut(s)	316
SmiMI	CAYNNNNRTG	3 cut(s)	284, 1001, 1203
SmlI	CTYRAG	3 cut(s)	316, 737, 1710
SmoI	CTYRAG	3 cut(s)	316, 737, 1710
SphI	GCATGC	1 cut(s)	1147
Sse9I	AATT	7 cut(s)	409, 435, 924, 1115, 1338, 1601, 1875
SsiI	CCGC	5 cut(s)	118, 134, 419, 827, 1697
SspMI	CTAG	4 cut(s)	62, 225, 1158, 1590
StyD4I	CCNGG	2 cut(s)	215, 505
StyI	CCWWGG	5 cut(s)	240, 268, 339, 529, 1779
TaaI	ACNGT	4 cut(s)	19, 29, 628, 1868
TaiI	ACGT	2 cut(s)	69, 1968
TaqI	TCGA	6 cut(s)	8, 234, 317, 869, 1343, 1958
TasI	AATT	7 cut(s)	409, 435, 924, 1115, 1338, 1601, 1875
TatI	WGTACW	2 cut(s)	345, 1182
TfiI	GAWTC	6 cut(s)	5, 236, 510, 1085, 1099, 1955
Tru1I	TTAA	6 cut(s)	23, 585, 1619, 1725, 1929, 2008
Tru9I	TTAA	6 cut(s)	23, 585, 1619, 1725, 1929, 2008
TscAI	CASTG	3 cut(s)	754, 1154, 1159
TseFI	GTSAC	4 cut(s)	660, 745, 803, 1896
TseI	GCWGC	5 cut(s)	150, 181, 824, 1438, 1795
Tsp45I	GTSAC	4 cut(s)	660, 745, 803, 1896
TspDTI	ATGAA	8 cut(s)	183, 387, 855, 1206, 1350, 1499, 1594, 1598
TspGWI	ACGGA	1 cut(s)	1436
TspRI	CASTG	3 cut(s)	754, 1154, 1159
Van91I	CCANNNNNTGG	1 cut(s)	530
VpaK11BI	GGWCC	2 cut(s)	919, 1859
XapI	RAATTY	5 cut(s)	435, 924, 1115, 1338, 1601
XceI	RCATGY	4 cut(s)	448, 1147, 1551, 1703
XhoI	CTCGAG	1 cut(s)	316
XmiI	GTMKAC	1 cut(s)	138
XmnI	GAANNNNTTC	3 cut(s)	174, 846, 1605
XspI	CTAG	4 cut(s)	62, 225, 1158, 1590
ZrmI	AGTACT	1 cut(s)	1184
Zsp2I	ATGCAT	1 cut(s)	1416

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.