Rh1AG079800
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Forward (+)
13494132 .. 13496753
2622 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG079800.1

Sequence Viewer

Length: 1869 bp
ATGGTTATGGAGGAAGGCATTCAGCTCCCCACCATTGTTGTTGTAGGTGACCAATCATCTGGCAAGTCAAGCGTCCTTGAATCCCTGGCCGGCATCAGCTTGCCACGTGGACAAGGTATCTGCACCAGGGTACCCCTTATAATGAGGCTTCAACACCGCTATAGTCCTGGGCCAGAGTTCCAGTTGGAGTACAATGGCAAAGTTGAGCACACTGATGAGGTCAACATTGCTGATGATATTGTCAATGCCACCAATGTTATTGCTGGTGGAGGTAAGGGAATTTCTAACACCCCATTGACTCTGTTGGTGAAAAAGAATGGTGTTCCTGATTTGACTATGGTTGATCTCCCTGGAATCACCAGAGTTCCTGTTCATGGTCAGCCCGAGGATATCTATGATCAAATCAAAGACATGATCATGGATTATATCAAGCCTGAAGAGAGCATCATTCTCAATGTGTTGTCTGCTACTGTTGATTTTACAACTTGTGAATCCATCAGGATGTCACAGAGTGTGGATAGAGCTGGTGATAGGACTCTGGCTGTGGTCACAAAGGTTGATAAGGCGCCCGAAGGACTATTAGAGAAGGTTACAGCAGATGATGTTGGTATTGGTCTTGGTTATGTCTGTGTGAGGAACCGGATTGGAGATGAAACTTATAAGGAGGCAAGGGCTAAATCTCTACAACTTTTTCAAACTCATCCTTTGCTGTCCAAGATTGACAAATCTATGGTTGGAATTCCAGTTCTGGCTCAAAAGTTGGTGCAGATTCAAGCTTCTAGCATAGCTAGAAACTTGCCAGACATTGTCAAGAAGATAAATGACAAGCTGAGTTCTTGTCTGTTGGAGTTGAACAAAATGCCAAAGAGTCTGTCATCTGTTGCTGAAGCCATGACCGCATTTATGCAGATCATCGGATCATCAAAAGAATCTCTTAGGAAAATTCTGGTGAGAGGAGAATTTGATGAGTTCCCTGATGACGAGCACATGCATTGCACTGCTCGGCTTTATAAGATGCTCAATCAGTACTCAGATCAACTTCACAAGTCTGAAGAAAGTGACCCAAAAAGTAACTTCTTAGTAGAGGAGATCAAGATTTTGGAGGAAGCAAATGGTATTAGTCTTCCGAATTTTGTTCCCCGCAATGCTTTTCTTGTTATCTTGCAGGGAAAAGTGAAGGGAATCTCGAGCATACCTATTGTATTTGTTGAGAAGGTTTGGAGTTATATTGAAGAAGTGGTTATGTCTGTGTTAATGCATAATACAGAAAACTATTATCAGCTTCAGGTATGCACCAGAAGAGCTGGCCGTAATCTTATAACAAGGATGAAAGAAAGGTCAGTTGAGTGGACAATGGAGATGGTGGAAATGGAGAAGCTGACTGATTATACAGGTAATCCAGAATATGTATCCGAATGGAGCAGGCTGATGGGTCAACAAGACGCATTTGTACATGCGGTCTTATCTAAAAATGACTCTACGGTCTCTGTAGAGGGTATTGGGGAAGTTGAAGTTGGAGTCCTTCGGCATTATGTTTCTCTTTTTTTCTTGGACGTGAATAATCATGTTCTGTCTCAGGCTTTTGACTTGAAAATGAGGATGACTGCCTATTGGAAAGTTGTTCTGAGAAGGCTTGTTGATTGTATGGCTTTGCATTTGCAGTTAAGTGTTTCAAAACTTGTGAACAAAGACATGGAGATTGAGATTGTGAAAGAGTTGATGGGACCAAATTGTGGTGGTGGGATTGAGAAAATGCTAGAGGAATCTCCAGCAGTTTCCGTCAAGCGCGAGAAGCTGGTAAAGAGCATAAAAAAGCTTAGGGATTCCAAAGAGGTTGTTGCTAAGATCTTGGATGGCGTTGCTACCTAA

Protein Analysis

622

Amino Acids

69.41

Weight (kDa)

5.79

Isoelectric Point (pI)

40.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dynamin_N PF00350 12 - 186 5e-40 Dynamin family
Dynamin_M PF01031 194 - 476 3.8e-62 Dynamin central region
GED PF02212 526 - 615 4.8e-09 Dynamin GTPase effector domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000365)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G60500 AT1G60530
fragaria_vesca FvH4_4g34670 FvH4_7g03430 FvH4_7g03440 FvH4_7g03780
malus_domestica MD02G1282600.v1.1 MD02G1282700.v1.1 MD02G1282900.v1.1 MD14G1008400.v1.1 MD14G1008800.v1.1 MD14G1008900.v1.1 MD14G1009000.v1.1 MD14G1009200.v1.1 MD14G1009300.v1.1
prunus_persica Prupe.2G039500_v2.0.a1 Prupe.2G039600_v2.0.a1 Prupe.2G039800_v2.0.a1 Prupe.2G039900_v2.0.a1 Prupe.2G040000_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015300_v2.0.a1
pyrus_communis pycom02g24110 pycom02g24120 pycom14g00720 pycom14g00740 pycom14g00780
rosa_chinensis RchiOBHm_Chr1g0325781 RchiOBHm_Chr1g0326171 RchiOBHm_Chr1g0326211 RchiOBHm_Chr1g0327001 RchiOBHm_Chr1g0327051 RchiOBHm_Chr1g0327071 RchiOBHm_Chr1g0327091 RchiOBHm_Chr1g0327111 RchiOBHm_Chr2g0127731 RchiOBHm_Chr2g0127741 RchiOBHm_Chr4g0444021
rosa_laevigata RLG00000005864 RLG00000005866 RLG00000030044 RLG00000030045 RLG00000030047 RLG00000030048 RLG00000030083 RLG00000030106
rosa_multiflora Rmu_sc0000795.1_g000013 Rmu_sc0000795.1_g000046 Rmu_sc0000795.1_g000049 Rmu_sc0004240.1_g000005 Rmu_sc0004240.1_g000006 Rmu_sc0006009.1_g000005 Rmu_sc0015522.1_g000011 Rmu_sc0025852.1_g000001
rosa_roxburghii Rroxscaffold_4G00323340 Rroxscaffold_4G00323420 Rroxscaffold_4G00323950 Rroxscaffold_4G00324390 Rroxscaffold_5G00384590
rosa_rugosa Rorug01G0054400 Rorug01G0057700 Rorug01G0062800 Rorug01G0062900 Rorug01G0063200 Rorug01G0063300 Rorug04G0349000
rosa_samantha Rh1AG069900 Rh1AG070200 Rh1AG070400 Rh1AG070700 Rh1AG071000 Rh1AG074600 Rh1AG079800 Rh1AG080000 Rh1AG080600 Rh1BG057600 Rh1BG060000 Rh1BG064000 Rh1CG070400 Rh1CG073100 Rh1CG077500 Rh1CG077600 Rh1CG078000 Rh1CG078600 Rh1DG075100 Rh1DG079900 Rh1DG084000 Rh1DG084100 Rh1DG084400 Rh1DG084900 Rh1DG085000 Rh2BG332700 Rh4AG409800 Rh4BG420900 Rh4CG435200 Rh4DG416100
rosa_wichuraiana Rw1G005780 Rw1G005990 Rw1G006330 Rw1G006340 Rw1G006380 Rw1G006390 Rw2G026260 Rw4G035200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 140, 660, 1011, 1319
AasI GACNNNNNNGTC 1 cut(s) 1481
Acc65I GGTACC 1 cut(s) 130
AccB1I GGYRCC 2 cut(s) 130, 565
AccB7I CCANNNNNTGG 1 cut(s) 1733
AccII CGCG 1 cut(s) 1788
AciI CCGC 4 cut(s) 157, 897, 1141, 1457
AclWI GGATC 1 cut(s) 925
AcoI YGGCCR 2 cut(s) 87, 1306
AcsI RAATTY 5 cut(s) 279, 738, 942, 959, 1129
AcuI CTGAAG 4 cut(s) 456, 906, 1071, 1268
AcvI CACGTG 1 cut(s) 107
AcyI GRCGYC 1 cut(s) 566
AdeI CACNNNGTG 1 cut(s) 512
AfaI GTAC 4 cut(s) 132, 191, 1028, 1452
AfiI CCNNNNNNNGG 2 cut(s) 374, 1733
AgsI TTSAA 9 cut(s) 80, 152, 695, 773, 853, 1232, 1511, 1591, 1674
AjiI CACGTC 1 cut(s) 1555
AjnI CCWGG 4 cut(s) 84, 125, 166, 349
AjuI GAANNNNNNNTTGG 2 cut(s) 1497, 1529
AloI GAACNNNNNNTCC 2 cut(s) 729, 761
Alw21I GWGCWC 2 cut(s) 210, 987
Alw26I GTCTC 2 cut(s) 1489, 1578
AlwI GGATC 1 cut(s) 925
Ama87I CYCGRG 2 cut(s) 383, 1186
AoxI GGCC 3 cut(s) 87, 170, 1306
ApoI RAATTY 5 cut(s) 279, 738, 942, 959, 1129
ArsI GACNNNNNNTTYG 2 cut(s) 857, 889
Asp700I GAANNNNTTC 1 cut(s) 18
Asp718I GGTACC 1 cut(s) 130
AspLEI GCGC 2 cut(s) 568, 1788
AspS9I GGNCC 2 cut(s) 170, 1724
AsuHPI GGTGA 5 cut(s) 59, 319, 349, 539, 961
AvaI CYCGRG 2 cut(s) 383, 1186
AvaII GGWCC 1 cut(s) 1724
BaeI ACNNNNGTAYC 2 cut(s) 114, 147
BanI GGYRCC 2 cut(s) 130, 565
BbrPI CACGTG 1 cut(s) 107
BbsI GAAGAC 1 cut(s) 1115
Bbv12I GWGCWC 2 cut(s) 210, 987
BccI CCATC 5 cut(s) 503, 1354, 1423, 1714, 1847
BceAI ACGGC 1 cut(s) 1293
BciT130I CCWGG 4 cut(s) 86, 127, 168, 351
BciVI GTATCC 1 cut(s) 1420
BclI TGATCA 2 cut(s) 397, 414
BcoDI GTCTC 2 cut(s) 1489, 1578
BfaI CTAG 3 cut(s) 780, 789, 1757
BfmI CTRYAG 2 cut(s) 160, 1488
BfoI RGCGCY 1 cut(s) 569
BfuI GTATCC 1 cut(s) 1420
BglII AGATCT 1 cut(s) 1845
BmcAI AGTACT 1 cut(s) 1028
Bme1390I CCNGG 4 cut(s) 86, 127, 168, 351
Bme18I GGWCC 1 cut(s) 1724
BmeT110I CYCGRG 2 cut(s) 383, 1186
BmgBI CACGTC 1 cut(s) 1555
BmgT120I GGNCC 2 cut(s) 170, 1724
BmiI GGNNCC 4 cut(s) 132, 567, 638, 1725
BmrFI CCNGG 4 cut(s) 86, 127, 168, 351
BmsI GCATC 3 cut(s) 102, 453, 1005
BpiI GAAGAC 1 cut(s) 1115
BpmI CTGGAG 1 cut(s) 1752
Bpu10I CCTNAGC 1 cut(s) 1817
BsaAI YACGTR 1 cut(s) 107
BsaHI GRCGYC 1 cut(s) 566
BsaI GGTCTC 1 cut(s) 1489
BsaJI CCNNGG 5 cut(s) 84, 126, 167, 349, 384
BsaWI WCCGGW 1 cut(s) 639
Bsc4I CCNNNNNNNGG 2 cut(s) 374, 1733
Bse118I RCCGGY 1 cut(s) 89
Bse1I ACTGG 2 cut(s) 181, 743
Bse3DI GCAATG 3 cut(s) 225, 991, 1150
BseBI CCWGG 4 cut(s) 86, 127, 168, 351
BseDI CCNNGG 5 cut(s) 84, 126, 167, 349, 384
BseGI GGATG 5 cut(s) 507, 700, 1332, 1605, 1858
BseLI CCNNNNNNNGG 2 cut(s) 374, 1733
BseMI GCAATG 3 cut(s) 225, 991, 1150
BseMII CTCAG 4 cut(s) 821, 1044, 1589, 1616
BseNI ACTGG 2 cut(s) 181, 743
BseRI GAGGAG 2 cut(s) 969, 1100
BsgI GTGCAG 2 cut(s) 106, 785
Bsh1236I CGCG 1 cut(s) 1788
BshFI GGCC 3 cut(s) 89, 172, 1308
BshNI GGYRCC 2 cut(s) 130, 565
BsiHKAI GWGCWC 2 cut(s) 210, 987
BsiHKCI CYCGRG 2 cut(s) 383, 1186
BsiSI CCGG 2 cut(s) 90, 640
BslFI GGGAC 1 cut(s) 1737
BslI CCNNNNNNNGG 2 cut(s) 374, 1733
BsmAI GTCTC 2 cut(s) 1489, 1578
BsmFI GGGAC 1 cut(s) 1737
BsmI GAATGC 1 cut(s) 18
BsnI GGCC 3 cut(s) 89, 172, 1308
Bso31I GGTCTC 1 cut(s) 1489
BsoBI CYCGRG 2 cut(s) 383, 1186
Bsp1286I GDGCHC 2 cut(s) 210, 987
Bsp1407I TGTACA 1 cut(s) 1450
Bsp143I GATC 8 cut(s) 343, 397, 414, 909, 917, 1033, 1089, 1845
BspACI CCGC 4 cut(s) 157, 897, 1141, 1457
BspANI GGCC 3 cut(s) 89, 172, 1308
BspCNI CTCAG 4 cut(s) 822, 1043, 1588, 1617
BspFNI CGCG 1 cut(s) 1788
BspLI GGNNCC 4 cut(s) 132, 567, 638, 1725
BspPI GGATC 1 cut(s) 925
BspQI GCTCTTC 1 cut(s) 1294
BspT107I GGYRCC 2 cut(s) 130, 565
BspTNI GGTCTC 1 cut(s) 1489
BsrDI GCAATG 3 cut(s) 225, 991, 1150
BsrFI RCCGGY 1 cut(s) 89
BsrGI TGTACA 1 cut(s) 1450
BsrI ACTGG 2 cut(s) 181, 743
BssAI RCCGGY 1 cut(s) 89
BssECI CCNNGG 5 cut(s) 84, 126, 167, 349, 384
BssMI GATC 8 cut(s) 343, 397, 414, 909, 917, 1033, 1089, 1845
BssNI GRCGYC 1 cut(s) 566
Bst2UI CCWGG 4 cut(s) 86, 127, 168, 351
Bst4CI ACNGT 2 cut(s) 472, 1483
Bst6I CTCTTC 2 cut(s) 432, 1294
BstACI GRCGYC 1 cut(s) 566
BstAUI TGTACA 1 cut(s) 1450
BstBAI YACGTR 1 cut(s) 107
BstC8I GCNNGC 4 cut(s) 91, 101, 1306, 1424
BstDEI CTNAG 8 cut(s) 830, 935, 1030, 1078, 1575, 1625, 1817, 1842
BstEII GGTNACC 1 cut(s) 47
BstF5I GGATG 5 cut(s) 507, 700, 1332, 1605, 1858
BstFNI CGCG 1 cut(s) 1788
BstH2I RGCGCY 1 cut(s) 569
BstHHI GCGC 2 cut(s) 568, 1788
BstKTI GATC 8 cut(s) 346, 400, 417, 912, 920, 1036, 1092, 1848
BstMAI GTCTC 2 cut(s) 1489, 1578
BstMBI GATC 8 cut(s) 343, 397, 414, 909, 917, 1033, 1089, 1845
BstMWI GCNNNNNNNGC 3 cut(s) 69, 896, 1792
BstNI CCWGG 4 cut(s) 86, 127, 168, 351
BstNSI RCATGY 2 cut(s) 991, 1457
BstPI GGTNACC 1 cut(s) 47
BstSCI CCNGG 4 cut(s) 84, 125, 166, 349
BstSFI CTRYAG 2 cut(s) 160, 1488
BstUI CGCG 1 cut(s) 1788
BstV2I GAAGAC 1 cut(s) 1115
BstX2I RGATCY 1 cut(s) 1845
BstXI CCANNNNNNTGG 1 cut(s) 59
BstYI RGATCY 1 cut(s) 1845
BsuI GTATCC 1 cut(s) 1420
BsuRI GGCC 3 cut(s) 89, 172, 1308
BtrI CACGTC 1 cut(s) 1555
BtsCI GGATG 5 cut(s) 507, 700, 1332, 1605, 1858
BtsI GCAGTG 1 cut(s) 996
BtsIMutI CAGTG 2 cut(s) 210, 996
Cac8I GCNNGC 4 cut(s) 91, 101, 1306, 1424
CfoI GCGC 2 cut(s) 568, 1788
Cfr10I RCCGGY 1 cut(s) 89
Cfr13I GGNCC 2 cut(s) 170, 1724
CseI GACGC 2 cut(s) 61, 1451
Csp6I GTAC 4 cut(s) 131, 190, 1027, 1451
CspCI CAANNNNNGTGG 2 cut(s) 19, 54
CviAII CATG 8 cut(s) 374, 412, 418, 892, 988, 1454, 1565, 1693
CviQI GTAC 4 cut(s) 131, 190, 1027, 1451
DdeI CTNAG 8 cut(s) 830, 935, 1030, 1078, 1575, 1625, 1817, 1842
DinI GGCGCC 1 cut(s) 567
DpnI GATC 8 cut(s) 345, 399, 416, 911, 919, 1035, 1091, 1847
DpnII GATC 8 cut(s) 343, 397, 414, 909, 917, 1033, 1089, 1845
DraIII CACNNNGTG 1 cut(s) 512
DrdI GACNNNNNNGTC 1 cut(s) 1481
DseDI GACNNNNNNGTC 1 cut(s) 1481
EaeI YGGCCR 2 cut(s) 87, 1306
Eam1104I CTCTTC 2 cut(s) 432, 1294
EarI CTCTTC 2 cut(s) 432, 1294
Eco31I GGTCTC 1 cut(s) 1489
Eco32I GATATC 1 cut(s) 391
Eco47I GGWCC 1 cut(s) 1724
Eco57I CTGAAG 4 cut(s) 456, 906, 1071, 1268
Eco72I CACGTG 1 cut(s) 107
Eco88I CYCGRG 2 cut(s) 383, 1186
Eco91I GGTNACC 1 cut(s) 47
EcoO65I GGTNACC 1 cut(s) 47
EcoRI GAATTC 1 cut(s) 738
EcoRII CCWGG 4 cut(s) 84, 125, 166, 349
EcoRV GATATC 1 cut(s) 391
EcoT22I ATGCAT 2 cut(s) 993, 1260
EgeI GGCGCC 1 cut(s) 567
EheI GGCGCC 1 cut(s) 567
FaeI CATG 8 cut(s) 377, 415, 421, 895, 991, 1457, 1568, 1696
FalI AAGNNNNNCTT 2 cut(s) 918, 950
FaqI GGGAC 1 cut(s) 1737
FatI CATG 8 cut(s) 373, 411, 417, 891, 987, 1453, 1564, 1692
FauI CCCGC 1 cut(s) 1148
FbaI TGATCA 2 cut(s) 397, 414
FokI GGATG 5 cut(s) 514, 687, 1339, 1612, 1865
FspBI CTAG 3 cut(s) 780, 789, 1757
GlaI GCGC 2 cut(s) 567, 1787
GsuI CTGGAG 1 cut(s) 1752
HaeII RGCGCY 1 cut(s) 569
HaeIII GGCC 3 cut(s) 89, 172, 1308
HapII CCGG 2 cut(s) 90, 640
HgaI GACGC 2 cut(s) 61, 1451
HhaI GCGC 2 cut(s) 568, 1788
Hin1I GRCGYC 1 cut(s) 566
Hin1II CATG 8 cut(s) 377, 415, 421, 895, 991, 1457, 1568, 1696
Hin6I GCGC 2 cut(s) 566, 1786
HinP1I GCGC 2 cut(s) 566, 1786
HincII GTYRAC 2 cut(s) 223, 1436
HindII GTYRAC 2 cut(s) 223, 1436
HindIII AAGCTT 2 cut(s) 774, 1814
HpaII CCGG 2 cut(s) 90, 640
HphI GGTGA 5 cut(s) 59, 319, 349, 539, 961
Hpy166II GTNNAC 5 cut(s) 110, 223, 1350, 1436, 1684
Hpy188I TCNGA 6 cut(s) 917, 1033, 1051, 1128, 1414, 1626
Hpy188III TCNNGA 6 cut(s) 326, 499, 811, 1093, 1186, 1400
Hpy8I GTNNAC 5 cut(s) 110, 223, 1350, 1436, 1684
HpyAV CCTTC 7 cut(s) 8, 566, 580, 1171, 1207, 1532, 1623
HpyCH4III ACNGT 2 cut(s) 472, 1483
HpyCH4IV ACGT 2 cut(s) 106, 1554
HpyF10VI GCNNNNNNNGC 3 cut(s) 69, 896, 1792
HpyF3I CTNAG 8 cut(s) 830, 935, 1030, 1078, 1575, 1625, 1817, 1842
HpySE526I ACGT 2 cut(s) 106, 1554
Hsp92I GRCGYC 1 cut(s) 566
Hsp92II CATG 8 cut(s) 377, 415, 421, 895, 991, 1457, 1568, 1696
HspAI GCGC 2 cut(s) 566, 1786
KasI GGCGCC 1 cut(s) 565
KpnI GGTACC 1 cut(s) 134
KroI GCCGGC 1 cut(s) 89
KroNI GCCGGC 1 cut(s) 91
Ksp22I TGATCA 2 cut(s) 397, 414
Kzo9I GATC 8 cut(s) 343, 397, 414, 909, 917, 1033, 1089, 1845
LguI GCTCTTC 1 cut(s) 1294
LmnI GCTCC 2 cut(s) 30, 1419
LweI GCATC 3 cut(s) 102, 453, 1005
MaeI CTAG 3 cut(s) 780, 789, 1757
MaeII ACGT 2 cut(s) 106, 1554
MaeIII GTNAC 6 cut(s) 47, 504, 547, 589, 1058, 1070
MalI GATC 8 cut(s) 345, 399, 416, 911, 919, 1035, 1091, 1847
MboI GATC 8 cut(s) 343, 397, 414, 909, 917, 1033, 1089, 1845
MboII GAAGA 6 cut(s) 449, 826, 1064, 1115, 1244, 1311
MflI RGATCY 1 cut(s) 1845
MhlI GDGCHC 2 cut(s) 210, 987
MluCI AATT 6 cut(s) 279, 738, 942, 959, 1129, 1729
Mly113I GGCGCC 1 cut(s) 566
MlyI GAGTC 5 cut(s) 292, 529, 877, 1469, 1527
MmeI TCCRAC 4 cut(s) 165, 715, 825, 1495
Mph1103I ATGCAT 2 cut(s) 993, 1260
MroNI GCCGGC 1 cut(s) 89
MroXI GAANNNNTTC 1 cut(s) 18
MseI TTAA 2 cut(s) 1253, 1664
MslI CAYNNNNRTG 3 cut(s) 213, 416, 500
MspI CCGG 2 cut(s) 90, 640
MspR9I CCNGG 4 cut(s) 86, 127, 168, 351
Mva1269I GAATGC 1 cut(s) 18
MvaI CCWGG 4 cut(s) 86, 127, 168, 351
MvnI CGCG 1 cut(s) 1788
MwoI GCNNNNNNNGC 3 cut(s) 69, 896, 1792
NaeI GCCGGC 1 cut(s) 91
NarI GGCGCC 1 cut(s) 566
NdeII GATC 8 cut(s) 343, 397, 414, 909, 917, 1033, 1089, 1845
NgoMIV GCCGGC 1 cut(s) 89
NlaIII CATG 8 cut(s) 377, 415, 421, 895, 991, 1457, 1568, 1696
NlaIV GGNNCC 4 cut(s) 132, 567, 638, 1725
NmeAIII GCCGAG 1 cut(s) 982
NmuCI GTSAC 4 cut(s) 47, 504, 547, 1058
NsiI ATGCAT 2 cut(s) 993, 1260
NspI RCATGY 2 cut(s) 991, 1457
PaeR7I CTCGAG 1 cut(s) 1186
PciSI GCTCTTC 1 cut(s) 1294
PctI GAATGC 1 cut(s) 18
PdiI GCCGGC 1 cut(s) 91
PdmI GAANNNNTTC 1 cut(s) 18
PfeI GAWTC 8 cut(s) 80, 354, 491, 769, 929, 1182, 1763, 1823
PflFI GACNNNGTC 1 cut(s) 806
PflMI CCANNNNNTGG 1 cut(s) 1733
PleI GAGTC 5 cut(s) 292, 529, 876, 1469, 1526
PluTI GGCGCC 1 cut(s) 569
PmaCI CACGTG 1 cut(s) 107
PmlI CACGTG 1 cut(s) 107
PpsI GAGTC 5 cut(s) 292, 529, 876, 1469, 1526
Ppu21I YACGTR 1 cut(s) 107
PsiI TTATAA 4 cut(s) 140, 660, 1011, 1319
Psp6I CCWGG 4 cut(s) 84, 125, 166, 349
PspCI CACGTG 1 cut(s) 107
PspEI GGTNACC 1 cut(s) 47
PspGI CCWGG 4 cut(s) 84, 125, 166, 349
PspN4I GGNNCC 4 cut(s) 132, 567, 638, 1725
PspPI GGNCC 2 cut(s) 170, 1724
PsuI RGATCY 1 cut(s) 1845
PsyI GACNNNGTC 1 cut(s) 806
RsaI GTAC 4 cut(s) 132, 191, 1028, 1452
RsaNI GTAC 4 cut(s) 131, 190, 1027, 1451
RseI CAYNNNNRTG 3 cut(s) 213, 416, 500
SapI GCTCTTC 1 cut(s) 1294
SaqAI TTAA 2 cut(s) 1253, 1664
Sau3AI GATC 8 cut(s) 343, 397, 414, 909, 917, 1033, 1089, 1845
Sau96I GGNCC 2 cut(s) 170, 1724
ScaI AGTACT 1 cut(s) 1028
SchI GAGTC 5 cut(s) 292, 529, 877, 1469, 1527
ScrFI CCNGG 4 cut(s) 86, 127, 168, 351
SduI GDGCHC 2 cut(s) 210, 987
SfaNI GCATC 3 cut(s) 102, 453, 1005
SfcI CTRYAG 2 cut(s) 160, 1488
SfoI GGCGCC 1 cut(s) 567
Sfr274I CTCGAG 1 cut(s) 1186
SinI GGWCC 1 cut(s) 1724
SlaI CTCGAG 1 cut(s) 1186
SmiMI CAYNNNNRTG 3 cut(s) 213, 416, 500
SmlI CTYRAG 1 cut(s) 1186
SmoI CTYRAG 1 cut(s) 1186
Sse9I AATT 6 cut(s) 279, 738, 942, 959, 1129, 1729
SsiI CCGC 4 cut(s) 157, 897, 1141, 1457
SspDI GGCGCC 1 cut(s) 565
SspMI CTAG 3 cut(s) 780, 789, 1757
StyD4I CCNGG 4 cut(s) 84, 125, 166, 349
TaaI ACNGT 2 cut(s) 472, 1483
TaiI ACGT 2 cut(s) 109, 1557
TaqI TCGA 1 cut(s) 1187
TasI AATT 6 cut(s) 279, 738, 942, 959, 1129, 1729
TatI WGTACW 3 cut(s) 189, 1026, 1450
TfiI GAWTC 8 cut(s) 80, 354, 491, 769, 929, 1182, 1763, 1823
Tru1I TTAA 2 cut(s) 1253, 1664
Tru9I TTAA 2 cut(s) 1253, 1664
TscAI CASTG 2 cut(s) 217, 1003
TseFI GTSAC 4 cut(s) 47, 504, 547, 1058
Tsp45I GTSAC 4 cut(s) 47, 504, 547, 1058
TspDTI ATGAA 3 cut(s) 362, 666, 1343
TspGWI ACGGA 1 cut(s) 1768
TspRI CASTG 2 cut(s) 217, 1003
Tth111I GACNNNGTC 1 cut(s) 806
Van91I CCANNNNNTGG 1 cut(s) 1733
VpaK11BI GGWCC 1 cut(s) 1724
XapI RAATTY 5 cut(s) 279, 738, 942, 959, 1129
XceI RCATGY 2 cut(s) 991, 1457
XhoI CTCGAG 1 cut(s) 1186
XmnI GAANNNNTTC 1 cut(s) 18
XspI CTAG 3 cut(s) 780, 789, 1757
ZrmI AGTACT 1 cut(s) 1028
Zsp2I ATGCAT 2 cut(s) 993, 1260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.