Rw1G006390
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
13065848 .. 13069498
3651 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G006390.1

Sequence Viewer

Length: 2076 bp
ATGCAACCGAAAAGTGACCCAAAATTCGAGCTTCACACGTTAATTTCAAAGCGGAGCTCCACTCTGGATAAAATCTCAGCAAAGCAAACAGATTTAGCATGCATTTCAGAAGGTGAAGGATCATCATGTGTAGAACAACATGCCATCATTGAAGCCGCACCAATTGTGTCATCCTACAATGACAAAATCCGTCCTCTGCTTGACGCCGTTGACAAGCTCAGGAGCCTCATGGTTATGGAGGAAGGCATTCAGCTCCCCACCATTGTTGTTGTAGGTGACCAATCATCTGGCAAATCAAGCGTCCTTGAATCCTTGGCCGGCATCAGCCTGCCACGTGGACAAGGTATCTGCACCAGAGTACCCCTTATAATGAGGCTTCAACATGTACACCACTCTAGTCCTGAACCAGAGTTCCGGTTGGAGTACAATGGCAAAGTTGAGCACACTGATGAGGTCCACATTGCTGATGATATTGTCAATGCCACCAATGTTATTGCTGGTGGAGGTAAGGGAATTTCTAACACCCCATTGACTCTGTTGGTGAAAAAGAATGGTGTTCCTGATTTGACTATGGTTGATCTCCCTGGAATCACTAGAGTTCCTGTTCATGGTCAGCCTGAGGATATCTATGATCAAATCAAAGACATGATCATGGAGTATATCAAGCCTGAAGAGAGCATCATTCTCAATGTGTTGTCTGCTACTGTCGATTTTACAACTTGTGAATCCATCAGGATGTCACAGACTGTGGATAAGGCTGGTGATAGGACTCTGGCTGTGGTCACAAAGGTTGATAAGGCGCCCGAAGGACTATTAGAGAAGGTCACAGCAGATGATGTTAGTATTGGTCTTGGTTATGTTTGTGTGAGGAACCGGATTGGAGATGAAACTTATGAGGAGGCAAGGGCTATATCTCAACAACTTTTTCAAACTCATCCTTTGCTGTCCAAGATTGATAAATCTATGGTTGGAATTCCAGTTCTGGCTCAAAAGTTGGTGCAAATTCAAGCTTCTAGCATAGCTAGAAACTTGCCAGACATCGTCAAGAAGATAAATGACAAGCTGAGTTCTTGTCTTTTGGAGTTGAACAAGATGCCAAAGAAACTGTCATCTGTTAGTGAAGCCATGACCACGTTTATGCAGATCATCGGATCATCAAAAGAATCGCTCAGGAAAATTCTTATGAGAGGAGAATTTGATGAATTCCCTGATGACAAGCGCATGCATTGCACTGCTCGGCTTTATGAGATGCTCAATCAGTACTCAGATCAACTTCAAAAGTGTGAAGAAAGTGACCCGAAAAAGAACTTCTTAGTAGAGGAGATCAAGATTTTGGAGGAAGCAAAAGGTATTAGTCTTCCGAATTATGTTCCCCGCAATGCTTTTCTTGTTATCTTGCAGGGAAAAGTGAAGGGAATTTCGAGCATACCTATTGGGTTTGTTGAGAAGGTTTGGAGTTATATTGAAGAAGTGGTCATGTCTGTGTTAATGCGTAATACAGAAAACTATTATCAGCTTCAGGTATGCACCAGAAGAGCTGGCCGAAATCTTATAACAAGGATGAAAGAAAGGTCAGTTCAGTGGATGATGGAGATAGTGGAAATGGAGAACCTGACTGATTATACATGTAATCCAGAATATGTATCCGAATGTAGTAGGCTTATGGGTCAACAAGGCACATTTATACATTTGGTGTTAAATGAAAACCACTCTAAGATCGATGTAGAGGGTATTGGGGAAGTTGAAGTTGGAGTCCTTCGGCAGTATCCTCAAGTTCTCTCTCAGGCTTTCGACTTGAAAATGAGGATGACTGCCTATTGGAAAGTTGTTCTGAGAAGGCTTGTTGATTGTATGGCTTTGCATTTGCAGTTGAGTGTTTCGAAACTTGTGAACCAAGAGATGGAGAGTGAGATTGTGAATGAGTTGATGGGACCAAATTGTGGTGGTGGGATTGAGAAAATGCTGGAGGAATCTCCAGCAGTTGCCATCAAGCGTGAGAAGCTGATTAAGAGCATCAAAAAGCTCAGGGATTCCAAAGAGGTTGTTGCTAAGATCTTGGATGGTGTTGCTACCTAA

Protein Analysis

691

Amino Acids

77.23

Weight (kDa)

5.79

Isoelectric Point (pI)

43.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dynamin_N PF00350 88 - 264 4e-41 Dynamin family
Dynamin_M PF01031 272 - 553 7.1e-62 Dynamin central region
GED PF02212 595 - 684 3.1e-10 Dynamin GTPase effector domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000365)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G60500 AT1G60530
fragaria_vesca FvH4_4g34670 FvH4_7g03430 FvH4_7g03440 FvH4_7g03780
malus_domestica MD02G1282600.v1.1 MD02G1282700.v1.1 MD02G1282900.v1.1 MD14G1008400.v1.1 MD14G1008800.v1.1 MD14G1008900.v1.1 MD14G1009000.v1.1 MD14G1009200.v1.1 MD14G1009300.v1.1
prunus_persica Prupe.2G039500_v2.0.a1 Prupe.2G039600_v2.0.a1 Prupe.2G039800_v2.0.a1 Prupe.2G039900_v2.0.a1 Prupe.2G040000_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015300_v2.0.a1
pyrus_communis pycom02g24110 pycom02g24120 pycom14g00720 pycom14g00740 pycom14g00780
rosa_chinensis RchiOBHm_Chr1g0325781 RchiOBHm_Chr1g0326171 RchiOBHm_Chr1g0326211 RchiOBHm_Chr1g0327001 RchiOBHm_Chr1g0327051 RchiOBHm_Chr1g0327071 RchiOBHm_Chr1g0327091 RchiOBHm_Chr1g0327111 RchiOBHm_Chr2g0127731 RchiOBHm_Chr2g0127741 RchiOBHm_Chr4g0444021
rosa_laevigata RLG00000005864 RLG00000005866 RLG00000030044 RLG00000030045 RLG00000030047 RLG00000030048 RLG00000030083 RLG00000030106
rosa_multiflora Rmu_sc0000795.1_g000013 Rmu_sc0000795.1_g000046 Rmu_sc0000795.1_g000049 Rmu_sc0004240.1_g000005 Rmu_sc0004240.1_g000006 Rmu_sc0006009.1_g000005 Rmu_sc0015522.1_g000011 Rmu_sc0025852.1_g000001
rosa_roxburghii Rroxscaffold_4G00323340 Rroxscaffold_4G00323420 Rroxscaffold_4G00323950 Rroxscaffold_4G00324390 Rroxscaffold_5G00384590
rosa_rugosa Rorug01G0054400 Rorug01G0057700 Rorug01G0062800 Rorug01G0062900 Rorug01G0063200 Rorug01G0063300 Rorug04G0349000
rosa_samantha Rh1AG069900 Rh1AG070200 Rh1AG070400 Rh1AG070700 Rh1AG071000 Rh1AG074600 Rh1AG079800 Rh1AG080000 Rh1AG080600 Rh1BG057600 Rh1BG060000 Rh1BG064000 Rh1CG070400 Rh1CG073100 Rh1CG077500 Rh1CG077600 Rh1CG078000 Rh1CG078600 Rh1DG075100 Rh1DG079900 Rh1DG084000 Rh1DG084100 Rh1DG084400 Rh1DG084900 Rh1DG085000 Rh2BG332700 Rh4AG409800 Rh4BG420900 Rh4CG435200 Rh4DG416100
rosa_wichuraiana Rw1G005780 Rw1G005990 Rw1G006330 Rw1G006340 Rw1G006380 Rw1G006390 Rw2G026260 Rw4G035200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 368, 1553
AccB1I GGYRCC 1 cut(s) 799
AccB7I CCANNNNNTGG 2 cut(s) 1900, 1940
AciI CCGC 3 cut(s) 52, 156, 1375
AclWI GGATC 2 cut(s) 127, 1159
AcoI YGGCCR 2 cut(s) 315, 1540
AcsI RAATTY 8 cut(s) 23, 513, 972, 1002, 1176, 1193, 1202, 1416
AcuI CTGAAG 2 cut(s) 690, 1502
AcvI CACGTG 1 cut(s) 335
AcyI GRCGYC 2 cut(s) 204, 800
AfaI GTAC 4 cut(s) 360, 387, 425, 1262
AfiI CCNNNNNNNGG 3 cut(s) 608, 1900, 1940
AflIII ACRYGT 3 cut(s) 36, 382, 1625
AjnI CCWGG 1 cut(s) 583
AjuI GAANNNNNNNTTGG 2 cut(s) 1731, 1763
AloI GAACNNNNNNTCC 4 cut(s) 396, 428, 963, 995
Alw21I GWGCWC 2 cut(s) 59, 444
AlwI GGATC 2 cut(s) 127, 1159
AoxI GGCC 2 cut(s) 315, 1540
ApoI RAATTY 8 cut(s) 23, 513, 972, 1002, 1176, 1193, 1202, 1416
ArsI GACNNNNNNTTYG 6 cut(s) 8, 40, 285, 317, 1091, 1123
Asp700I GAANNNNTTC 1 cut(s) 246
AspLEI GCGC 2 cut(s) 802, 1221
AspS9I GGNCC 2 cut(s) 454, 1931
AsuHPI GGTGA 4 cut(s) 125, 287, 553, 773
AsuII TTCGAA 1 cut(s) 1880
AvaII GGWCC 2 cut(s) 454, 1931
AxyI CCTNAGG 1 cut(s) 618
BaeI ACNNNNGTAYC 2 cut(s) 342, 375
BanI GGYRCC 1 cut(s) 799
BanII GRGCYC 1 cut(s) 59
BbrPI CACGTG 1 cut(s) 335
BbsI GAAGAC 1 cut(s) 1349
Bbv12I GWGCWC 2 cut(s) 59, 444
BccI CCATC 7 cut(s) 152, 737, 1582, 1894, 1921, 1994, 2054
BceAI ACGGC 1 cut(s) 191
BciT130I CCWGG 1 cut(s) 585
BciVI GTATCC 2 cut(s) 1654, 1776
BclI TGATCA 2 cut(s) 631, 648
BfaI CTAG 4 cut(s) 396, 594, 1014, 1023
BfoI RGCGCY 1 cut(s) 803
BfuI GTATCC 2 cut(s) 1654, 1776
BglII AGATCT 1 cut(s) 2052
BisI GCNGC 1 cut(s) 156
BlsI GCNGC 1 cut(s) 157
BmcAI AGTACT 1 cut(s) 1262
Bme1390I CCNGG 1 cut(s) 585
Bme18I GGWCC 2 cut(s) 454, 1931
BmgT120I GGNCC 2 cut(s) 454, 1931
BmiI GGNNCC 4 cut(s) 224, 801, 872, 1932
BmrFI CCNGG 1 cut(s) 585
BmsI GCATC 5 cut(s) 330, 687, 1083, 1239, 2022
BpiI GAAGAC 1 cut(s) 1349
BplI GAGNNNNNCTC 2 cut(s) 46, 78
BpmI CTGGAG 2 cut(s) 1959, 1985
Bpu10I CCTNAGC 3 cut(s) 218, 1169, 2024
Bpu14I TTCGAA 1 cut(s) 1880
BpuEI CTTGAG 1 cut(s) 1755
Bsa29I ATCGAT 1 cut(s) 1719
BsaAI YACGTR 1 cut(s) 335
BsaHI GRCGYC 2 cut(s) 204, 800
BsaJI CCNNGG 2 cut(s) 312, 583
BsaWI WCCGGW 2 cut(s) 414, 873
Bsc4I CCNNNNNNNGG 3 cut(s) 608, 1900, 1940
Bse118I RCCGGY 1 cut(s) 317
Bse1I ACTGG 1 cut(s) 977
Bse21I CCTNAGG 1 cut(s) 618
Bse3DI GCAATG 3 cut(s) 459, 1225, 1384
BseBI CCWGG 1 cut(s) 585
BseCI ATCGAT 1 cut(s) 1719
BseDI CCNNGG 2 cut(s) 312, 583
BseGI GGATG 7 cut(s) 170, 741, 934, 1566, 1590, 1812, 2065
BseLI CCNNNNNNNGG 3 cut(s) 608, 1900, 1940
BseMI GCAATG 3 cut(s) 459, 1225, 1384
BseMII CTCAG 9 cut(s) 90, 232, 609, 1055, 1183, 1278, 1796, 1823, 2038
BseNI ACTGG 1 cut(s) 977
BseRI GAGGAG 3 cut(s) 911, 1203, 1334
BsgI GTGCAG 1 cut(s) 334
BshFI GGCC 2 cut(s) 317, 1542
BshNI GGYRCC 1 cut(s) 799
BshVI ATCGAT 1 cut(s) 1719
BsiHKAI GWGCWC 2 cut(s) 59, 444
BsiSI CCGG 3 cut(s) 318, 415, 874
BslFI GGGAC 1 cut(s) 1944
BslI CCNNNNNNNGG 3 cut(s) 608, 1900, 1940
BsmFI GGGAC 1 cut(s) 1944
BsmI GAATGC 1 cut(s) 246
BsnI GGCC 2 cut(s) 317, 1542
Bsp119I TTCGAA 1 cut(s) 1880
Bsp1286I GDGCHC 2 cut(s) 59, 444
Bsp1407I TGTACA 1 cut(s) 385
BspACI CCGC 3 cut(s) 52, 156, 1375
BspANI GGCC 2 cut(s) 317, 1542
BspCNI CTCAG 9 cut(s) 89, 231, 610, 1056, 1182, 1277, 1795, 1824, 2037
BspDI ATCGAT 1 cut(s) 1719
BspLI GGNNCC 4 cut(s) 224, 801, 872, 1932
BspPI GGATC 2 cut(s) 127, 1159
BspQI GCTCTTC 1 cut(s) 1528
BspT104I TTCGAA 1 cut(s) 1880
BspT107I GGYRCC 1 cut(s) 799
BsrDI GCAATG 3 cut(s) 459, 1225, 1384
BsrFI RCCGGY 1 cut(s) 317
BsrGI TGTACA 1 cut(s) 385
BsrI ACTGG 1 cut(s) 977
BssAI RCCGGY 1 cut(s) 317
BssECI CCNNGG 2 cut(s) 312, 583
BssNI GRCGYC 2 cut(s) 204, 800
BssT1I CCWWGG 1 cut(s) 312
Bst2UI CCWGG 1 cut(s) 585
Bst4CI ACNGT 3 cut(s) 706, 748, 1107
Bst6I CTCTTC 2 cut(s) 666, 1528
BstACI GRCGYC 2 cut(s) 204, 800
BstAPI GCANNNNNTGC 1 cut(s) 1227
BstAUI TGTACA 1 cut(s) 385
BstBAI YACGTR 1 cut(s) 335
BstBI TTCGAA 1 cut(s) 1880
BstC8I GCNNGC 5 cut(s) 100, 319, 329, 1223, 1540
BstEII GGTNACC 1 cut(s) 275
BstF5I GGATG 7 cut(s) 170, 741, 934, 1566, 1590, 1812, 2065
BstH2I RGCGCY 1 cut(s) 803
BstHHI GCGC 2 cut(s) 802, 1221
BstMWI GCNNNNNNNGC 3 cut(s) 297, 1227, 1999
BstNI CCWGG 1 cut(s) 585
BstNSI RCATGY 5 cut(s) 102, 143, 386, 1225, 1629
BstPI GGTNACC 1 cut(s) 275
BstSCI CCNGG 1 cut(s) 583
BstV2I GAAGAC 1 cut(s) 1349
BstX2I RGATCY 1 cut(s) 2052
BstXI CCANNNNNNTGG 1 cut(s) 287
BstYI RGATCY 1 cut(s) 2052
Bsu15I ATCGAT 1 cut(s) 1719
Bsu36I CCTNAGG 1 cut(s) 618
BsuI GTATCC 2 cut(s) 1654, 1776
BsuRI GGCC 2 cut(s) 317, 1542
BsuTUI ATCGAT 1 cut(s) 1719
BtsCI GGATG 7 cut(s) 170, 741, 934, 1566, 1590, 1812, 2065
BtsI GCAGTG 1 cut(s) 1230
BtsIMutI CAGTG 3 cut(s) 444, 1230, 1586
Cac8I GCNNGC 5 cut(s) 100, 319, 329, 1223, 1540
CfoI GCGC 2 cut(s) 802, 1221
Cfr10I RCCGGY 1 cut(s) 317
Cfr13I GGNCC 2 cut(s) 454, 1931
ClaI ATCGAT 1 cut(s) 1719
CseI GACGC 2 cut(s) 212, 289
Csp6I GTAC 4 cut(s) 359, 386, 424, 1261
CspCI CAANNNNNGTGG 2 cut(s) 247, 282
CviQI GTAC 4 cut(s) 359, 386, 424, 1261
DinI GGCGCC 1 cut(s) 801
EaeI YGGCCR 2 cut(s) 315, 1540
Eam1104I CTCTTC 2 cut(s) 666, 1528
EarI CTCTTC 2 cut(s) 666, 1528
Ecl136II GAGCTC 1 cut(s) 57
Eco130I CCWWGG 1 cut(s) 312
Eco24I GRGCYC 1 cut(s) 59
Eco32I GATATC 1 cut(s) 625
Eco47I GGWCC 2 cut(s) 454, 1931
Eco53kI GAGCTC 1 cut(s) 57
Eco57I CTGAAG 2 cut(s) 690, 1502
Eco72I CACGTG 1 cut(s) 335
Eco81I CCTNAGG 1 cut(s) 618
Eco91I GGTNACC 1 cut(s) 275
EcoICRI GAGCTC 1 cut(s) 57
EcoO65I GGTNACC 1 cut(s) 275
EcoRI GAATTC 2 cut(s) 972, 1202
EcoRII CCWGG 1 cut(s) 583
EcoRV GATATC 1 cut(s) 625
EcoT14I CCWWGG 1 cut(s) 312
EcoT22I ATGCAT 2 cut(s) 104, 1227
EcoT38I GRGCYC 1 cut(s) 59
EgeI GGCGCC 1 cut(s) 801
EheI GGCGCC 1 cut(s) 801
ErhI CCWWGG 1 cut(s) 312
FalI AAGNNNNNCTT 2 cut(s) 1295, 1327
FaqI GGGAC 1 cut(s) 1944
FauI CCCGC 1 cut(s) 1382
FbaI TGATCA 2 cut(s) 631, 648
Fnu4HI GCNGC 1 cut(s) 156
FokI GGATG 7 cut(s) 157, 748, 921, 1573, 1597, 1819, 2072
FriOI GRGCYC 1 cut(s) 59
Fsp4HI GCNGC 1 cut(s) 156
FspBI CTAG 4 cut(s) 396, 594, 1014, 1023
GlaI GCGC 2 cut(s) 801, 1220
GluI GCNGC 1 cut(s) 156
GsuI CTGGAG 2 cut(s) 1959, 1985
HaeII RGCGCY 1 cut(s) 803
HaeIII GGCC 2 cut(s) 317, 1542
HapII CCGG 3 cut(s) 318, 415, 874
HgaI GACGC 2 cut(s) 212, 289
HhaI GCGC 2 cut(s) 802, 1221
Hin1I GRCGYC 2 cut(s) 204, 800
Hin6I GCGC 2 cut(s) 800, 1219
HinP1I GCGC 2 cut(s) 800, 1219
HincII GTYRAC 2 cut(s) 211, 1670
HindII GTYRAC 2 cut(s) 211, 1670
HindIII AAGCTT 1 cut(s) 1008
HinfI GANTC 9 cut(s) 308, 532, 588, 725, 769, 1163, 1752, 1970, 2030
HpaII CCGG 3 cut(s) 318, 415, 874
HphI GGTGA 4 cut(s) 125, 287, 553, 773
Hpy166II GTNNAC 6 cut(s) 211, 338, 388, 457, 1670, 1891
Hpy188I TCNGA 6 cut(s) 109, 1151, 1267, 1362, 1648, 1833
Hpy188III TCNNGA 9 cut(s) 65, 220, 401, 560, 733, 1045, 1171, 1327, 1634
Hpy8I GTNNAC 6 cut(s) 211, 338, 388, 457, 1670, 1891
HpyAV CCTTC 9 cut(s) 104, 110, 236, 800, 814, 1405, 1441, 1766, 1830
HpyCH4III ACNGT 3 cut(s) 706, 748, 1107
HpyCH4IV ACGT 3 cut(s) 38, 334, 1133
HpyF10VI GCNNNNNNNGC 3 cut(s) 297, 1227, 1999
HpySE526I ACGT 3 cut(s) 38, 334, 1133
Hsp92I GRCGYC 2 cut(s) 204, 800
HspAI GCGC 2 cut(s) 800, 1219
KasI GGCGCC 1 cut(s) 799
KroI GCCGGC 1 cut(s) 317
KroNI GCCGGC 1 cut(s) 319
Ksp22I TGATCA 2 cut(s) 631, 648
LguI GCTCTTC 1 cut(s) 1528
LmnI GCTCC 4 cut(s) 54, 62, 222, 258
LweI GCATC 5 cut(s) 330, 687, 1083, 1239, 2022
MaeI CTAG 4 cut(s) 396, 594, 1014, 1023
MaeII ACGT 3 cut(s) 38, 334, 1133
MaeIII GTNAC 6 cut(s) 14, 275, 738, 781, 823, 1292
MboII GAAGA 6 cut(s) 683, 1060, 1298, 1349, 1478, 1545
MfeI CAATTG 1 cut(s) 162
MflI RGATCY 1 cut(s) 2052
MhlI GDGCHC 2 cut(s) 59, 444
Mly113I GGCGCC 1 cut(s) 800
MlyI GAGTC 3 cut(s) 526, 763, 1761
MmeI TCCRAC 3 cut(s) 399, 949, 1729
Mph1103I ATGCAT 2 cut(s) 104, 1227
MroNI GCCGGC 1 cut(s) 317
MroXI GAANNNNTTC 1 cut(s) 246
MseI TTAA 4 cut(s) 41, 1487, 1697, 2007
MslI CAYNNNNRTG 6 cut(s) 233, 447, 650, 734, 1136, 1481
MspI CCGG 3 cut(s) 318, 415, 874
MspR9I CCNGG 1 cut(s) 585
MunI CAATTG 1 cut(s) 162
Mva1269I GAATGC 1 cut(s) 246
MvaI CCWGG 1 cut(s) 585
MwoI GCNNNNNNNGC 3 cut(s) 297, 1227, 1999
NaeI GCCGGC 1 cut(s) 319
NarI GGCGCC 1 cut(s) 800
NgoMIV GCCGGC 1 cut(s) 317
NlaIV GGNNCC 4 cut(s) 224, 801, 872, 1932
NmeAIII GCCGAG 1 cut(s) 1216
NmuCI GTSAC 6 cut(s) 14, 275, 738, 781, 823, 1292
NsiI ATGCAT 2 cut(s) 104, 1227
NspI RCATGY 5 cut(s) 102, 143, 386, 1225, 1629
NspV TTCGAA 1 cut(s) 1880
PaeI GCATGC 2 cut(s) 102, 1225
PciI ACATGT 2 cut(s) 382, 1625
PciSI GCTCTTC 1 cut(s) 1528
PctI GAATGC 1 cut(s) 246
PdiI GCCGGC 1 cut(s) 319
PdmI GAANNNNTTC 1 cut(s) 246
PfeI GAWTC 6 cut(s) 308, 588, 725, 1163, 1970, 2030
PflFI GACNNNGTC 1 cut(s) 1040
PflMI CCANNNNNTGG 2 cut(s) 1900, 1940
PkrI GCNGC 1 cut(s) 157
PleI GAGTC 3 cut(s) 526, 763, 1760
PluTI GGCGCC 1 cut(s) 803
PmaCI CACGTG 1 cut(s) 335
PmlI CACGTG 1 cut(s) 335
PpsI GAGTC 3 cut(s) 526, 763, 1760
Ppu21I YACGTR 1 cut(s) 335
PscI ACATGT 2 cut(s) 382, 1625
PsiI TTATAA 2 cut(s) 368, 1553
Psp124BI GAGCTC 1 cut(s) 59
Psp6I CCWGG 1 cut(s) 583
PspCI CACGTG 1 cut(s) 335
PspEI GGTNACC 1 cut(s) 275
PspGI CCWGG 1 cut(s) 583
PspN4I GGNNCC 4 cut(s) 224, 801, 872, 1932
PspPI GGNCC 2 cut(s) 454, 1931
PsuI RGATCY 1 cut(s) 2052
PsyI GACNNNGTC 1 cut(s) 1040
RsaI GTAC 4 cut(s) 360, 387, 425, 1262
RsaNI GTAC 4 cut(s) 359, 386, 424, 1261
RseI CAYNNNNRTG 6 cut(s) 233, 447, 650, 734, 1136, 1481
SacI GAGCTC 1 cut(s) 59
SapI GCTCTTC 1 cut(s) 1528
SaqAI TTAA 4 cut(s) 41, 1487, 1697, 2007
SatI GCNGC 1 cut(s) 156
Sau96I GGNCC 2 cut(s) 454, 1931
ScaI AGTACT 1 cut(s) 1262
SchI GAGTC 3 cut(s) 526, 763, 1761
ScrFI CCNGG 1 cut(s) 585
SduI GDGCHC 2 cut(s) 59, 444
SfaNI GCATC 5 cut(s) 330, 687, 1083, 1239, 2022
SfoI GGCGCC 1 cut(s) 801
SfuI TTCGAA 1 cut(s) 1880
SinI GGWCC 2 cut(s) 454, 1931
SmiMI CAYNNNNRTG 6 cut(s) 233, 447, 650, 734, 1136, 1481
SmlI CTYRAG 1 cut(s) 1770
SmoI CTYRAG 1 cut(s) 1770
SphI GCATGC 2 cut(s) 102, 1225
SsiI CCGC 3 cut(s) 52, 156, 1375
SspDI GGCGCC 1 cut(s) 799
SspMI CTAG 4 cut(s) 396, 594, 1014, 1023
SstI GAGCTC 1 cut(s) 59
StyD4I CCNGG 1 cut(s) 583
StyI CCWWGG 1 cut(s) 312
TaaI ACNGT 3 cut(s) 706, 748, 1107
TaiI ACGT 3 cut(s) 41, 337, 1136
TaqI TCGA 6 cut(s) 27, 708, 1421, 1719, 1791, 1880
TatI WGTACW 3 cut(s) 385, 423, 1260
TauI GCSGC 1 cut(s) 158
TfiI GAWTC 6 cut(s) 308, 588, 725, 1163, 1970, 2030
Tru1I TTAA 4 cut(s) 41, 1487, 1697, 2007
Tru9I TTAA 4 cut(s) 41, 1487, 1697, 2007
TscAI CASTG 3 cut(s) 451, 1237, 1586
TseFI GTSAC 6 cut(s) 14, 275, 738, 781, 823, 1292
Tsp45I GTSAC 6 cut(s) 14, 275, 738, 781, 823, 1292
TspDTI ATGAA 5 cut(s) 596, 900, 1215, 1577, 1716
TspGWI ACGGA 1 cut(s) 179
TspRI CASTG 3 cut(s) 451, 1237, 1586
Tth111I GACNNNGTC 1 cut(s) 1040
Van91I CCANNNNNTGG 2 cut(s) 1900, 1940
VpaK11BI GGWCC 2 cut(s) 454, 1931
XapI RAATTY 8 cut(s) 23, 513, 972, 1002, 1176, 1193, 1202, 1416
XceI RCATGY 5 cut(s) 102, 143, 386, 1225, 1629
XmnI GAANNNNTTC 1 cut(s) 246
XspI CTAG 4 cut(s) 396, 594, 1014, 1023
ZrmI AGTACT 1 cut(s) 1262
Zsp2I ATGCAT 2 cut(s) 104, 1227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.