Rw1G006380
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
13052512 .. 13054521
2010 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G006380.1

Sequence Viewer

Length: 1857 bp
ATGGGAGCAGCAAAGCAAACAGATTTAGCATGCATTTCAGAAGGTGAAGGATCATTATGTGTAGAACAACATGCCATCATTGAAGCAGCACCGATTGTGTCATCCTACAATGAAAATATCCGTCCTCTCCTTGACGCCATTGACAAGCTCAGGAGCCTCATGGCTATGGAGGAAGGCATTCAGCTCCCCACCATTAATGTTGTTGTAGGTGACCAATCATCTGGCAAGTCAAGCGTCCTTGAATCCCTGCCCGGCATCAGCCTGCCACGTGGACTAGGTATCTGCACCAGGGTACCCCTTATAATGAGGCTTCAACACCACTCTAGTCCTGAACCAGAGTTCCAGTTGGAGTATAATGGCAAAGTTGAGCACACTGATGAGGTCAACATTGCTGATGATATTGTCAATGCCACCAATGCTATTGCTGGGGCAGGTAAGGGAATTTCTAAAACCCCATTGACTTTGTTGGTGAAAAAGGATGGTGTTCCTGGTTTGACTATGGTTGATCTCCCTGGAATCACTAGAGTTTCTGTTCATGGTCAGCCTGAGGATATCTATGATCAAATCAAAGATATGATCATGCAGTATATCAAGCCTAAGGAGAGCATCATTCTCAATGTGTTGTCTGCTACTGTTGATTTTACAACTTGTGAATCCATCAGGACGTCACAGAGTGTGGATAGAGCTGGTGATAGAACTCTGGCTGTGGTCACAAAGGTTGATAAGGCGCCCGAAGGACTATTTGAGAACGTTACAGTAGATGCTGTTAGTATTGGTCTTGGTAATGTCTGTGTGAGGAACCGGATTGGAGATGAAACTTATGAGGAGGCAAGGGCTATATCTCAACATCTTTTTCAAACTCATCCTTTTCTGTCCAAGATTGACAAATCTATGGTTGGAATTCCAGTTCTGGCTCAAAAGTTGGTGCAGATTCAAGCTTCTAGCATAGCTAGAAACTTGCCAGACATTGTCAAGAAGATAAATGACAAGCTGAATTCTTGTCTTTTGGAGTTGAACAAAATGCCAAAGAGTCTGTCACCTGTTGCTGAAGCCATGACTGCTTTTATGCAGATCATCGGATCATCAAAAGAATCGCTTAGGAAAATTCTGGTGAGAGGAGAATTTGATGAATTCCCTGATGACGAGCACATGCATTGCACTGCTCGGATTTGTGAGATGCTCAATCAGTATTCAGATCAACTTCACAACTGCGAAGAAAGTGACACGAAAAGTAACCTCTTAGTAGAGGAGATCAAGCTTTTGGAGGAAGCAAAAGAAAACTATTATCAGCTTCAGGTATGTACCAGAAGAGCTGGCCATAATCTTATATCGAGGATGAAAGAAAGGTCAGTTGAGTGGATGATGGAGATAATGGAAATGGAGAAGCTCACTGATTATAGATGTAATCCAGAATATGTATCTGAATGGAGTAAGCTGATGGGTCAACAAGACGCATTTATACATTTGGTGTTAATTGAAAATCACTCTACGATCCATGTAGAGGGTATTGGGGAAGTTGAACTTGGAGCCCTTCGGCAGTATCCTCCTCCTCATGTTTTCTATCAGGCTTTTGACTTGAAAATGAGTATGACTGCGTATTGGAAAGTTGTTCTGAGAAGGCTTGTTGATTGTATGGCTTTGCATTTGCAGTTGAGTGTTTCGAAACTTGTGAACCAAGACATGGAGATTGAGATTGTGAATGAGTTGATGGGACCAAATTGTGGTGGTGGGATTGAAAAAATGCTGGAGGAATCTCCAGCAGTTTCCATCAAGCGCGAGAAGCAGATTAATAGCATCAAAAAGCTTAGGGATTCCGAAGAGGTTGTTGCTAAGATCGTAGATGGTGTTGCTACCTGA

Protein Analysis

618

Amino Acids

68.76

Weight (kDa)

5.21

Isoelectric Point (pI)

44.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dynamin_N PF00350 67 - 240 5.9e-38 Dynamin family
Dynamin_M PF01031 251 - 421 2.1e-31 Dynamin central region
GED PF02212 523 - 611 9.3e-08 Dynamin GTPase effector domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000365)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G60500 AT1G60530
fragaria_vesca FvH4_4g34670 FvH4_7g03430 FvH4_7g03440 FvH4_7g03780
malus_domestica MD02G1282600.v1.1 MD02G1282700.v1.1 MD02G1282900.v1.1 MD14G1008400.v1.1 MD14G1008800.v1.1 MD14G1008900.v1.1 MD14G1009000.v1.1 MD14G1009200.v1.1 MD14G1009300.v1.1
prunus_persica Prupe.2G039500_v2.0.a1 Prupe.2G039600_v2.0.a1 Prupe.2G039800_v2.0.a1 Prupe.2G039900_v2.0.a1 Prupe.2G040000_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015300_v2.0.a1
pyrus_communis pycom02g24110 pycom02g24120 pycom14g00720 pycom14g00740 pycom14g00780
rosa_chinensis RchiOBHm_Chr1g0325781 RchiOBHm_Chr1g0326171 RchiOBHm_Chr1g0326211 RchiOBHm_Chr1g0327001 RchiOBHm_Chr1g0327051 RchiOBHm_Chr1g0327071 RchiOBHm_Chr1g0327091 RchiOBHm_Chr1g0327111 RchiOBHm_Chr2g0127731 RchiOBHm_Chr2g0127741 RchiOBHm_Chr4g0444021
rosa_laevigata RLG00000005864 RLG00000005866 RLG00000030044 RLG00000030045 RLG00000030047 RLG00000030048 RLG00000030083 RLG00000030106
rosa_multiflora Rmu_sc0000795.1_g000013 Rmu_sc0000795.1_g000046 Rmu_sc0000795.1_g000049 Rmu_sc0004240.1_g000005 Rmu_sc0004240.1_g000006 Rmu_sc0006009.1_g000005 Rmu_sc0015522.1_g000011 Rmu_sc0025852.1_g000001
rosa_roxburghii Rroxscaffold_4G00323340 Rroxscaffold_4G00323420 Rroxscaffold_4G00323950 Rroxscaffold_4G00324390 Rroxscaffold_5G00384590
rosa_rugosa Rorug01G0054400 Rorug01G0057700 Rorug01G0062800 Rorug01G0062900 Rorug01G0063200 Rorug01G0063300 Rorug04G0349000
rosa_samantha Rh1AG069900 Rh1AG070200 Rh1AG070400 Rh1AG070700 Rh1AG071000 Rh1AG074600 Rh1AG079800 Rh1AG080000 Rh1AG080600 Rh1BG057600 Rh1BG060000 Rh1BG064000 Rh1CG070400 Rh1CG073100 Rh1CG077500 Rh1CG077600 Rh1CG078000 Rh1CG078600 Rh1DG075100 Rh1DG079900 Rh1DG084000 Rh1DG084100 Rh1DG084400 Rh1DG084900 Rh1DG085000 Rh2BG332700 Rh4AG409800 Rh4BG420900 Rh4CG435200 Rh4DG416100
rosa_wichuraiana Rw1G005780 Rw1G005990 Rw1G006330 Rw1G006340 Rw1G006380 Rw1G006390 Rw2G026260 Rw4G035200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 302
AatII GACGTC 1 cut(s) 668
Acc36I ACCTGC 1 cut(s) 422
Acc65I GGTACC 1 cut(s) 292
AccB1I GGYRCC 2 cut(s) 292, 727
AccB7I CCANNNNNTGG 2 cut(s) 1681, 1721
AccII CGCG 1 cut(s) 1776
AclI AACGTT 1 cut(s) 750
AclWI GGATC 3 cut(s) 58, 1087, 1486
AcoI YGGCCR 1 cut(s) 1315
AcsI RAATTY 6 cut(s) 441, 900, 994, 1104, 1121, 1130
AcuI CTGAAG 2 cut(s) 1068, 1277
AcvI CACGTG 1 cut(s) 269
AcyI GRCGYC 3 cut(s) 135, 665, 728
AdeI CACNNNGTG 1 cut(s) 674
AfaI GTAC 2 cut(s) 294, 1303
AfiI CCNNNNNNNGG 3 cut(s) 1501, 1681, 1721
AjnI CCWGG 3 cut(s) 287, 487, 511
AjuI GAANNNNNNNTTGG 2 cut(s) 1506, 1538
AloI GAACNNNNNNTCC 4 cut(s) 324, 356, 891, 923
Alw21I GWGCWC 2 cut(s) 372, 1149
AlwI GGATC 3 cut(s) 58, 1087, 1486
AoxI GGCC 1 cut(s) 1315
ApeKI GCWGC 2 cut(s) 8, 86
ApoI RAATTY 6 cut(s) 441, 900, 994, 1104, 1121, 1130
ArsI GACNNNNNNTTYG 2 cut(s) 1019, 1051
AseI ATTAAT 2 cut(s) 195, 1788
Asp700I GAANNNNTTC 1 cut(s) 177
Asp718I GGTACC 1 cut(s) 292
AspLEI GCGC 2 cut(s) 730, 1776
AspS9I GGNCC 1 cut(s) 1712
AsuC2I CCSGG 1 cut(s) 252
AsuHPI GGTGA 6 cut(s) 56, 221, 481, 701, 1029, 1123
AsuII TTCGAA 1 cut(s) 1661
AvaII GGWCC 1 cut(s) 1712
AxyI CCTNAGG 2 cut(s) 546, 597
BaeI ACNNNNGTAYC 2 cut(s) 276, 309
BalI TGGCCA 1 cut(s) 1317
BanI GGYRCC 2 cut(s) 292, 727
BanII GRGCYC 1 cut(s) 1531
BbrPI CACGTG 1 cut(s) 269
Bbv12I GWGCWC 2 cut(s) 372, 1149
BbvI GCAGC 2 cut(s) 20, 98
BccI CCATC 8 cut(s) 83, 473, 665, 1357, 1432, 1702, 1775, 1835
BciT130I CCWGG 3 cut(s) 289, 489, 513
BciVI GTATCC 1 cut(s) 1551
BclI TGATCA 2 cut(s) 559, 576
BcnI CCSGG 1 cut(s) 252
BfaI CTAG 5 cut(s) 275, 324, 522, 942, 951
BfoI RGCGCY 1 cut(s) 731
BfuAI ACCTGC 1 cut(s) 422
BfuI GTATCC 1 cut(s) 1551
BisI GCNGC 2 cut(s) 9, 87
BlsI GCNGC 2 cut(s) 10, 88
Bme1390I CCNGG 4 cut(s) 252, 289, 489, 513
Bme18I GGWCC 1 cut(s) 1712
BmgT120I GGNCC 1 cut(s) 1712
BmiI GGNNCC 6 cut(s) 155, 294, 729, 800, 1528, 1713
BmrFI CCNGG 4 cut(s) 252, 289, 489, 513
BmsI GCATC 5 cut(s) 264, 615, 751, 1167, 1803
BpmI CTGGAG 2 cut(s) 1740, 1766
Bpu10I CCTNAGC 3 cut(s) 149, 1097, 1805
Bpu14I TTCGAA 1 cut(s) 1661
BpuMI CCSGG 1 cut(s) 252
BsaAI YACGTR 1 cut(s) 269
BsaHI GRCGYC 3 cut(s) 135, 665, 728
BsaJI CCNNGG 2 cut(s) 288, 511
BsaWI WCCGGW 1 cut(s) 801
Bsc4I CCNNNNNNNGG 3 cut(s) 1501, 1681, 1721
Bse1I ACTGG 2 cut(s) 343, 905
Bse21I CCTNAGG 2 cut(s) 546, 597
Bse3DI GCAATG 2 cut(s) 387, 1153
BseBI CCWGG 3 cut(s) 289, 489, 513
BseDI CCNNGG 2 cut(s) 288, 511
BseGI GGATG 5 cut(s) 101, 484, 862, 1341, 1365
BseLI CCNNNNNNNGG 3 cut(s) 1501, 1681, 1721
BseMI GCAATG 2 cut(s) 387, 1153
BseMII CTCAG 3 cut(s) 163, 537, 1604
BseNI ACTGG 2 cut(s) 343, 905
BseRI GAGGAG 5 cut(s) 839, 1131, 1262, 1536, 1539
BseXI GCAGC 2 cut(s) 20, 98
BseYI CCCAGC 1 cut(s) 425
BsgI GTGCAG 2 cut(s) 268, 947
Bsh1236I CGCG 1 cut(s) 1776
BshFI GGCC 1 cut(s) 1317
BshNI GGYRCC 2 cut(s) 292, 727
BsiHKAI GWGCWC 2 cut(s) 372, 1149
BsiSI CCGG 2 cut(s) 252, 802
BslFI GGGAC 1 cut(s) 1725
BslI CCNNNNNNNGG 3 cut(s) 1501, 1681, 1721
BsmFI GGGAC 1 cut(s) 1725
BsmI GAATGC 1 cut(s) 177
BsnI GGCC 1 cut(s) 1317
Bsp119I TTCGAA 1 cut(s) 1661
Bsp1286I GDGCHC 3 cut(s) 372, 1149, 1531
BspANI GGCC 1 cut(s) 1317
BspCNI CTCAG 3 cut(s) 162, 538, 1605
BspFNI CGCG 1 cut(s) 1776
BspLI GGNNCC 6 cut(s) 155, 294, 729, 800, 1528, 1713
BspMI ACCTGC 1 cut(s) 422
BspPI GGATC 3 cut(s) 58, 1087, 1486
BspQI GCTCTTC 1 cut(s) 1303
BspT104I TTCGAA 1 cut(s) 1661
BspT107I GGYRCC 2 cut(s) 292, 727
BsrDI GCAATG 2 cut(s) 387, 1153
BsrI ACTGG 2 cut(s) 343, 905
BssECI CCNNGG 2 cut(s) 288, 511
BssNI GRCGYC 3 cut(s) 135, 665, 728
Bst2UI CCWGG 3 cut(s) 289, 489, 513
Bst4CI ACNGT 2 cut(s) 634, 757
Bst6I CTCTTC 2 cut(s) 1303, 1812
BstACI GRCGYC 3 cut(s) 135, 665, 728
BstBAI YACGTR 1 cut(s) 269
BstBI TTCGAA 1 cut(s) 1661
BstC8I GCNNGC 3 cut(s) 31, 263, 1315
BstDEI CTNAG 8 cut(s) 149, 546, 597, 1097, 1240, 1613, 1805, 1830
BstEII GGTNACC 1 cut(s) 209
BstF5I GGATG 5 cut(s) 101, 484, 862, 1341, 1365
BstFNI CGCG 1 cut(s) 1776
BstH2I RGCGCY 1 cut(s) 731
BstHHI GCGC 2 cut(s) 730, 1776
BstMWI GCNNNNNNNGC 4 cut(s) 231, 416, 1058, 1780
BstNI CCWGG 3 cut(s) 289, 489, 513
BstNSI RCATGY 3 cut(s) 33, 74, 1153
BstPI GGTNACC 1 cut(s) 209
BstSCI CCNGG 4 cut(s) 250, 287, 487, 511
BstUI CGCG 1 cut(s) 1776
BstV1I GCAGC 2 cut(s) 20, 98
BstXI CCANNNNNNTGG 1 cut(s) 221
Bsu36I CCTNAGG 2 cut(s) 546, 597
BsuI GTATCC 1 cut(s) 1551
BsuRI GGCC 1 cut(s) 1317
BtsCI GGATG 5 cut(s) 101, 484, 862, 1341, 1365
BtsI GCAGTG 1 cut(s) 1158
BtsIMutI CAGTG 3 cut(s) 372, 1158, 1389
BveI ACCTGC 1 cut(s) 422
Cac8I GCNNGC 3 cut(s) 31, 263, 1315
CfoI GCGC 2 cut(s) 730, 1776
Cfr13I GGNCC 1 cut(s) 1712
CseI GACGC 3 cut(s) 143, 223, 1460
Csp6I GTAC 2 cut(s) 293, 1302
CviQI GTAC 2 cut(s) 293, 1302
DdeI CTNAG 8 cut(s) 149, 546, 597, 1097, 1240, 1613, 1805, 1830
DinI GGCGCC 1 cut(s) 729
DraIII CACNNNGTG 1 cut(s) 674
EaeI YGGCCR 1 cut(s) 1315
Eam1104I CTCTTC 2 cut(s) 1303, 1812
EarI CTCTTC 2 cut(s) 1303, 1812
Eco24I GRGCYC 1 cut(s) 1531
Eco32I GATATC 1 cut(s) 553
Eco47I GGWCC 1 cut(s) 1712
Eco57I CTGAAG 2 cut(s) 1068, 1277
Eco72I CACGTG 1 cut(s) 269
Eco81I CCTNAGG 2 cut(s) 546, 597
Eco91I GGTNACC 1 cut(s) 209
EcoO65I GGTNACC 1 cut(s) 209
EcoRI GAATTC 3 cut(s) 900, 994, 1130
EcoRII CCWGG 3 cut(s) 287, 487, 511
EcoRV GATATC 1 cut(s) 553
EcoT22I ATGCAT 2 cut(s) 35, 1155
EcoT38I GRGCYC 1 cut(s) 1531
EgeI GGCGCC 1 cut(s) 729
EheI GGCGCC 1 cut(s) 729
FalI AAGNNNNNCTT 4 cut(s) 1080, 1112, 1506, 1538
FaqI GGGAC 1 cut(s) 1725
FbaI TGATCA 2 cut(s) 559, 576
Fnu4HI GCNGC 2 cut(s) 9, 87
FokI GGATG 5 cut(s) 88, 491, 849, 1348, 1372
FriOI GRGCYC 1 cut(s) 1531
Fsp4HI GCNGC 2 cut(s) 9, 87
FspBI CTAG 5 cut(s) 275, 324, 522, 942, 951
GlaI GCGC 2 cut(s) 729, 1775
GluI GCNGC 2 cut(s) 9, 87
GsaI CCCAGC 1 cut(s) 429
GsuI CTGGAG 2 cut(s) 1740, 1766
HaeII RGCGCY 1 cut(s) 731
HaeIII GGCC 1 cut(s) 1317
HapII CCGG 2 cut(s) 252, 802
HgaI GACGC 3 cut(s) 143, 223, 1460
HhaI GCGC 2 cut(s) 730, 1776
Hin1I GRCGYC 3 cut(s) 135, 665, 728
Hin6I GCGC 2 cut(s) 728, 1774
HinP1I GCGC 2 cut(s) 728, 1774
HincII GTYRAC 2 cut(s) 385, 1445
HindII GTYRAC 2 cut(s) 385, 1445
HindIII AAGCTT 3 cut(s) 936, 1256, 1802
HinfI GANTC 8 cut(s) 242, 516, 653, 931, 1030, 1091, 1751, 1811
HpaII CCGG 2 cut(s) 252, 802
HphI GGTGA 6 cut(s) 56, 221, 481, 701, 1029, 1123
Hpy166II GTNNAC 4 cut(s) 272, 385, 1445, 1672
Hpy188I TCNGA 7 cut(s) 40, 1079, 1167, 1195, 1423, 1614, 1816
Hpy188III TCNNGA 5 cut(s) 151, 329, 661, 973, 1409
Hpy8I GTNNAC 4 cut(s) 272, 385, 1445, 1672
HpyAV CCTTC 6 cut(s) 35, 41, 167, 728, 1541, 1611
HpyCH4III ACNGT 2 cut(s) 634, 757
HpyCH4IV ACGT 3 cut(s) 268, 665, 750
HpyCH4V TGCA 9 cut(s) 33, 285, 583, 928, 1069, 1153, 1158, 1642, 1648
HpyF10VI GCNNNNNNNGC 4 cut(s) 231, 416, 1058, 1780
HpyF3I CTNAG 8 cut(s) 149, 546, 597, 1097, 1240, 1613, 1805, 1830
HpySE526I ACGT 3 cut(s) 268, 665, 750
Hsp92I GRCGYC 3 cut(s) 135, 665, 728
HspAI GCGC 2 cut(s) 728, 1774
KasI GGCGCC 1 cut(s) 727
KpnI GGTACC 1 cut(s) 296
Ksp22I TGATCA 2 cut(s) 559, 576
LguI GCTCTTC 1 cut(s) 1303
LmnI GCTCC 4 cut(s) 5, 153, 189, 1526
Lsp1109I GCAGC 2 cut(s) 20, 98
LweI GCATC 5 cut(s) 264, 615, 751, 1167, 1803
MaeI CTAG 5 cut(s) 275, 324, 522, 942, 951
MaeII ACGT 3 cut(s) 268, 665, 750
MaeIII GTNAC 7 cut(s) 209, 666, 709, 751, 1035, 1220, 1232
MboII GAAGA 4 cut(s) 988, 1226, 1320, 1829
MhlI GDGCHC 3 cut(s) 372, 1149, 1531
MlsI TGGCCA 1 cut(s) 1317
MluCI AATT 8 cut(s) 441, 900, 994, 1104, 1121, 1130, 1473, 1717
MluNI TGGCCA 1 cut(s) 1317
Mly113I GGCGCC 1 cut(s) 728
MlyI GAGTC 1 cut(s) 1039
MmeI TCCRAC 2 cut(s) 327, 877
Mox20I TGGCCA 1 cut(s) 1317
Mph1103I ATGCAT 2 cut(s) 35, 1155
MroXI GAANNNNTTC 1 cut(s) 177
MscI TGGCCA 1 cut(s) 1317
MseI TTAA 3 cut(s) 195, 1472, 1788
MslI CAYNNNNRTG 2 cut(s) 164, 375
Msp20I TGGCCA 1 cut(s) 1317
MspI CCGG 2 cut(s) 252, 802
MspR9I CCNGG 4 cut(s) 252, 289, 489, 513
Mva1269I GAATGC 1 cut(s) 177
MvaI CCWGG 3 cut(s) 289, 489, 513
MvnI CGCG 1 cut(s) 1776
MwoI GCNNNNNNNGC 4 cut(s) 231, 416, 1058, 1780
NarI GGCGCC 1 cut(s) 728
NciI CCSGG 1 cut(s) 252
NlaIV GGNNCC 6 cut(s) 155, 294, 729, 800, 1528, 1713
NmuCI GTSAC 5 cut(s) 209, 666, 709, 1035, 1220
NsiI ATGCAT 2 cut(s) 35, 1155
NspI RCATGY 3 cut(s) 33, 74, 1153
NspV TTCGAA 1 cut(s) 1661
PaeI GCATGC 1 cut(s) 33
PciSI GCTCTTC 1 cut(s) 1303
PctI GAATGC 1 cut(s) 177
PdmI GAANNNNTTC 1 cut(s) 177
PfeI GAWTC 7 cut(s) 242, 516, 653, 931, 1091, 1751, 1811
PflFI GACNNNGTC 1 cut(s) 968
PflMI CCANNNNNTGG 2 cut(s) 1681, 1721
PkrI GCNGC 2 cut(s) 10, 88
PleI GAGTC 1 cut(s) 1038
PluTI GGCGCC 1 cut(s) 731
PmaCI CACGTG 1 cut(s) 269
PmlI CACGTG 1 cut(s) 269
PpsI GAGTC 1 cut(s) 1038
Ppu21I YACGTR 1 cut(s) 269
PshBI ATTAAT 2 cut(s) 195, 1788
PsiI TTATAA 1 cut(s) 302
Psp1406I AACGTT 1 cut(s) 750
Psp6I CCWGG 3 cut(s) 287, 487, 511
PspCI CACGTG 1 cut(s) 269
PspEI GGTNACC 1 cut(s) 209
PspFI CCCAGC 1 cut(s) 425
PspGI CCWGG 3 cut(s) 287, 487, 511
PspN4I GGNNCC 6 cut(s) 155, 294, 729, 800, 1528, 1713
PspPI GGNCC 1 cut(s) 1712
PsyI GACNNNGTC 1 cut(s) 968
RsaI GTAC 2 cut(s) 294, 1303
RsaNI GTAC 2 cut(s) 293, 1302
RseI CAYNNNNRTG 2 cut(s) 164, 375
SapI GCTCTTC 1 cut(s) 1303
SaqAI TTAA 3 cut(s) 195, 1472, 1788
SatI GCNGC 2 cut(s) 9, 87
Sau96I GGNCC 1 cut(s) 1712
SchI GAGTC 1 cut(s) 1039
ScrFI CCNGG 4 cut(s) 252, 289, 489, 513
SduI GDGCHC 3 cut(s) 372, 1149, 1531
SfaNI GCATC 5 cut(s) 264, 615, 751, 1167, 1803
SfoI GGCGCC 1 cut(s) 729
SfuI TTCGAA 1 cut(s) 1661
SinI GGWCC 1 cut(s) 1712
SmiMI CAYNNNNRTG 2 cut(s) 164, 375
SphI GCATGC 1 cut(s) 33
Sse9I AATT 8 cut(s) 441, 900, 994, 1104, 1121, 1130, 1473, 1717
SspDI GGCGCC 1 cut(s) 727
SspMI CTAG 5 cut(s) 275, 324, 522, 942, 951
StyD4I CCNGG 4 cut(s) 250, 287, 487, 511
TaaI ACNGT 2 cut(s) 634, 757
TaiI ACGT 3 cut(s) 271, 668, 753
TaqI TCGA 2 cut(s) 1331, 1661
TasI AATT 8 cut(s) 441, 900, 994, 1104, 1121, 1130, 1473, 1717
TfiI GAWTC 7 cut(s) 242, 516, 653, 931, 1091, 1751, 1811
Tru1I TTAA 3 cut(s) 195, 1472, 1788
Tru9I TTAA 3 cut(s) 195, 1472, 1788
TscAI CASTG 3 cut(s) 379, 1165, 1396
TseFI GTSAC 5 cut(s) 209, 666, 709, 1035, 1220
TseI GCWGC 2 cut(s) 8, 86
Tsp45I GTSAC 5 cut(s) 209, 666, 709, 1035, 1220
TspDTI ATGAA 5 cut(s) 126, 524, 828, 1143, 1352
TspGWI ACGGA 1 cut(s) 110
TspRI CASTG 3 cut(s) 379, 1165, 1396
Tth111I GACNNNGTC 1 cut(s) 968
Van91I CCANNNNNTGG 2 cut(s) 1681, 1721
VpaK11BI GGWCC 1 cut(s) 1712
VspI ATTAAT 2 cut(s) 195, 1788
XapI RAATTY 6 cut(s) 441, 900, 994, 1104, 1121, 1130
XceI RCATGY 3 cut(s) 33, 74, 1153
XmnI GAANNNNTTC 1 cut(s) 177
XspI CTAG 5 cut(s) 275, 324, 522, 942, 951
ZraI GACGTC 1 cut(s) 666
Zsp2I ATGCAT 2 cut(s) 35, 1155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.