Rh1BG064000
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
Physical Location & Seq
Forward (+)
9563045 .. 9565042
1998 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG064000.1

Sequence Viewer

Length: 1998 bp
ATGGGAGCAGCAAAGCAAACAGATTTTGCATGCATTTCAGAAGGTGAAGGATCATCATGTGTAGAACAACATGCCATCATTGAAGCAGCACCAATAGTGTCATCCTACAATGACAAAATCCGTCCTCTCCTTGACGCCGTTGACAAGCTCAGGAGCCTCATGGTTATGGAGGAAGGCATTCAGCTCCCCACCATTGTCGTTGTAGGTGACCAATCATCTGGCAAGTCAAGCGTCCTTGAATCCCTGGCCGGCATCAGCCTGCCACGTGGACAAGGTATCTGTACCAGGGTACCCCTTATAATGAGGCTTCAACACCACTCTAGTCCTGAACCAGAGTTCCAGTTGGAGTACAATGGCAAAGTTGAGCACACTGATGAGATCAACATTGCTGATGCTATTGTCAATGCCACCAATGATATTGCTGGTGGAGGTAAGGGAATTTCTAACACCCCATTGACTTTGTTGGTGAAAAAGAATGGTGTTCCGGATTTGACTATGGTTGATCTCCCTGGAATCACTAGAGTTCCTGTTCATGGTCAGCCCGAGGATATCTATGATCAAATCAAAGACATGATCATGGATTATATCAAGCCTGAAGAGAGCATCATTCTCAATGTGTTGTCTGCTACTGTTGATTTTACAACTTGTGAATCCATCAGGATGTCACAGAGTGTGGATAAAGCTGGTGATAGGACTCTGGCTGTGGTCACAAAGGTTGATAAGGCGCCCGAAGGACTATTAGAGAAGGTTACAGCAGATGATGTTGGTATTGGTCTTGGTTATGTTTGTGTGAGGAACCGGATTGGAGATGAAACTTATGAGGAGGCAAGGGCTAAATCTCAACAACTTTTTAAAACTCATCCTTTGCTGTCCAAGATTGACAAATCTGTGGTTGGAATTCCAGTTCTGGCTCAAAAGTTGGTGCAGATTCAAGCTTCTAGCATAGCTAGAAACTTGCCAGACATTGTCAAGAAGATAAATGACAAGCTGAGTTCTTGTCTTTTGGAGTTGAACAAAATGCCAAAGAGTCTGTCATCTGTTGCTGAAGCCATGACCGCGTTTATGCAGATCATCGGATCATCAAAAGAATCTCTTAGGAAAATTCTGGTGAGAGGAGAATTTGATGAATTCCCTGCTGACAAGCACATGCATTGCACTGCTCGGCTTAATAAGATGCTCAATCAGTACTCATATCAACTTCACAAGTGTGAAGAAAGTGACCCAAAAAGTAACTTCTTAGTAGAGGAGATCAAGATTTTGGAGGAAGCAAATGGTATTAGTCTTCCGAATTTTGTTCCCCGCAATGCTTTTCTTGTTATCTTGCAGGGAAAAGTGAAGGGAATCTCGAGCATACCTATTGGATTTGTTGAGAGCGTTTGGAGTTATATTGAAGAAGTGGTTATGTCTGTGTTAATGCATAATACAGAAAACTATTATCAGCTTCAGGTTTGCACCAGAAGAGCTGGCCATAATCTTATAACAAGGATGAAAGAAAGGTCAGTTGAGTGGACGATGGAGATGGTGGAAATGGAGAAGACTGATTATACAGGTAATCCAGAATATGTATCCGAATGGAGCAGGCTGATGGGTCAACAAGACACATTTGTACATGCGGTGTTATCTAAAAATGACTCTACGATCTCTGTAGAGGGTATTGGGGAAGTTGAAGTTGGAGACCTTCGGCAGTATTCTCAAGTTCTCTCTCAGGCTTTTGACTTGAAAATGAGGATGACTGCCTATTGGAAAGTTGTTCTAAGAAGGCTTGTTGATTGTATGGCTTTGCATTTGCAGTTGAGTGTTTCGAAACTTGTGAACGAAGACATGGAGAGTGAGATTGTGAATGAGTTGATGGGACCAAATTGTGGTGGTGGGATTGAGAAAATGCTGGAGGAATCTCCAGCAGTTGCCACCAAGCGCGAGAAGCTGATTAAGAGCATCAAAAAGCTCAGGGATTCCAAAGAGGTTGTTGCTAAGATCTTGGATGGTGTTGCTACCTAA

Protein Analysis

665

Amino Acids

73.66

Weight (kDa)

5.42

Isoelectric Point (pI)

43.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dynamin_N PF00350 65 - 239 1.1e-40 Dynamin family
Dynamin_M PF01031 247 - 528 3.6e-62 Dynamin central region
GED PF02212 569 - 658 9.5e-11 Dynamin GTPase effector domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000365)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G60500 AT1G60530
fragaria_vesca FvH4_4g34670 FvH4_7g03430 FvH4_7g03440 FvH4_7g03780
malus_domestica MD02G1282600.v1.1 MD02G1282700.v1.1 MD02G1282900.v1.1 MD14G1008400.v1.1 MD14G1008800.v1.1 MD14G1008900.v1.1 MD14G1009000.v1.1 MD14G1009200.v1.1 MD14G1009300.v1.1
prunus_persica Prupe.2G039500_v2.0.a1 Prupe.2G039600_v2.0.a1 Prupe.2G039800_v2.0.a1 Prupe.2G039900_v2.0.a1 Prupe.2G040000_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015300_v2.0.a1
pyrus_communis pycom02g24110 pycom02g24120 pycom14g00720 pycom14g00740 pycom14g00780
rosa_chinensis RchiOBHm_Chr1g0325781 RchiOBHm_Chr1g0326171 RchiOBHm_Chr1g0326211 RchiOBHm_Chr1g0327001 RchiOBHm_Chr1g0327051 RchiOBHm_Chr1g0327071 RchiOBHm_Chr1g0327091 RchiOBHm_Chr1g0327111 RchiOBHm_Chr2g0127731 RchiOBHm_Chr2g0127741 RchiOBHm_Chr4g0444021
rosa_laevigata RLG00000005864 RLG00000005866 RLG00000030044 RLG00000030045 RLG00000030047 RLG00000030048 RLG00000030083 RLG00000030106
rosa_multiflora Rmu_sc0000795.1_g000013 Rmu_sc0000795.1_g000046 Rmu_sc0000795.1_g000049 Rmu_sc0004240.1_g000005 Rmu_sc0004240.1_g000006 Rmu_sc0006009.1_g000005 Rmu_sc0015522.1_g000011 Rmu_sc0025852.1_g000001
rosa_roxburghii Rroxscaffold_4G00323340 Rroxscaffold_4G00323420 Rroxscaffold_4G00323950 Rroxscaffold_4G00324390 Rroxscaffold_5G00384590
rosa_rugosa Rorug01G0054400 Rorug01G0057700 Rorug01G0062800 Rorug01G0062900 Rorug01G0063200 Rorug01G0063300 Rorug04G0349000
rosa_samantha Rh1AG069900 Rh1AG070200 Rh1AG070400 Rh1AG070700 Rh1AG071000 Rh1AG074600 Rh1AG079800 Rh1AG080000 Rh1AG080600 Rh1BG057600 Rh1BG060000 Rh1BG064000 Rh1CG070400 Rh1CG073100 Rh1CG077500 Rh1CG077600 Rh1CG078000 Rh1CG078600 Rh1DG075100 Rh1DG079900 Rh1DG084000 Rh1DG084100 Rh1DG084400 Rh1DG084900 Rh1DG085000 Rh2BG332700 Rh4AG409800 Rh4BG420900 Rh4CG435200 Rh4DG416100
rosa_wichuraiana Rw1G005780 Rw1G005990 Rw1G006330 Rw1G006340 Rw1G006380 Rw1G006390 Rw2G026260 Rw4G035200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 299, 1478
Acc65I GGTACC 1 cut(s) 289
AccB1I GGYRCC 2 cut(s) 289, 724
AccB7I CCANNNNNTGG 1 cut(s) 1862
AccII CGCG 2 cut(s) 1058, 1917
AccIII TCCGGA 1 cut(s) 484
AciI CCGC 3 cut(s) 1056, 1300, 1613
AclWI GGATC 2 cut(s) 58, 1084
AcoI YGGCCR 2 cut(s) 246, 1465
AcsI RAATTY 6 cut(s) 438, 897, 1101, 1118, 1127, 1288
AcuI CTGAAG 3 cut(s) 615, 1065, 1427
AcvI CACGTG 1 cut(s) 266
AcyI GRCGYC 2 cut(s) 135, 725
AdeI CACNNNGTG 1 cut(s) 671
AfaI GTAC 5 cut(s) 283, 291, 350, 1187, 1608
AfiI CCNNNNNNNGG 2 cut(s) 533, 1862
AgsI TTSAA 8 cut(s) 83, 239, 311, 932, 1012, 1391, 1667, 1720
AjnI CCWGG 3 cut(s) 243, 284, 508
AjuI GAANNNNNNNTTGG 2 cut(s) 1653, 1685
AleI CACNNNNGTG 1 cut(s) 1206
AloI GAACNNNNNNTCC 4 cut(s) 321, 353, 888, 920
Alw21I GWGCWC 1 cut(s) 369
Alw26I GTCTC 1 cut(s) 1668
AlwI GGATC 2 cut(s) 58, 1084
Ama87I CYCGRG 2 cut(s) 542, 1345
Aor13HI TCCGGA 1 cut(s) 484
AoxI GGCC 2 cut(s) 246, 1465
ApeKI GCWGC 2 cut(s) 8, 86
ApoI RAATTY 6 cut(s) 438, 897, 1101, 1118, 1127, 1288
ArsI GACNNNNNNTTYG 2 cut(s) 1016, 1048
Asp700I GAANNNNTTC 1 cut(s) 177
Asp718I GGTACC 1 cut(s) 289
AspLEI GCGC 2 cut(s) 727, 1917
AspS9I GGNCC 1 cut(s) 1853
AsuHPI GGTGA 5 cut(s) 56, 218, 478, 698, 1120
AsuII TTCGAA 1 cut(s) 1802
AvaI CYCGRG 2 cut(s) 542, 1345
AvaII GGWCC 1 cut(s) 1853
BaeI ACNNNNGTAYC 2 cut(s) 273, 306
BalI TGGCCA 1 cut(s) 1467
BanI GGYRCC 2 cut(s) 289, 724
BbrPI CACGTG 1 cut(s) 266
BbsI GAAGAC 3 cut(s) 1274, 1541, 1824
Bbv12I GWGCWC 1 cut(s) 369
BbvI GCAGC 2 cut(s) 20, 98
BccI CCATC 7 cut(s) 83, 662, 1507, 1513, 1579, 1843, 1976
BceAI ACGGC 1 cut(s) 122
BciT130I CCWGG 3 cut(s) 245, 286, 510
BciVI GTATCC 1 cut(s) 1576
BclI TGATCA 2 cut(s) 556, 573
BcoDI GTCTC 1 cut(s) 1668
BfaI CTAG 4 cut(s) 321, 519, 939, 948
BfmI CTRYAG 1 cut(s) 1644
BfoI RGCGCY 1 cut(s) 728
BfuI GTATCC 1 cut(s) 1576
BglII AGATCT 1 cut(s) 1974
BisI GCNGC 2 cut(s) 9, 87
BlsI GCNGC 2 cut(s) 10, 88
BmcAI AGTACT 1 cut(s) 1187
Bme1390I CCNGG 3 cut(s) 245, 286, 510
Bme18I GGWCC 1 cut(s) 1853
BmeT110I CYCGRG 2 cut(s) 542, 1345
BmgT120I GGNCC 1 cut(s) 1853
BmiI GGNNCC 5 cut(s) 155, 291, 726, 797, 1854
BmrFI CCNGG 3 cut(s) 245, 286, 510
BmsI GCATC 5 cut(s) 261, 382, 612, 1164, 1944
BpiI GAAGAC 3 cut(s) 1274, 1541, 1824
BpmI CTGGAG 2 cut(s) 1881, 1907
Bpu10I CCTNAGC 2 cut(s) 149, 1946
Bpu14I TTCGAA 1 cut(s) 1802
BpuEI CTTGAG 1 cut(s) 1677
BsaAI YACGTR 1 cut(s) 266
BsaHI GRCGYC 2 cut(s) 135, 725
BsaI GGTCTC 1 cut(s) 1668
BsaJI CCNNGG 4 cut(s) 243, 285, 508, 543
BsaWI WCCGGW 2 cut(s) 484, 798
Bsc4I CCNNNNNNNGG 2 cut(s) 533, 1862
Bse118I RCCGGY 1 cut(s) 248
Bse1I ACTGG 2 cut(s) 340, 902
Bse3DI GCAATG 3 cut(s) 384, 1150, 1309
BseAI TCCGGA 1 cut(s) 484
BseBI CCWGG 3 cut(s) 245, 286, 510
BseDI CCNNGG 4 cut(s) 243, 285, 508, 543
BseGI GGATG 6 cut(s) 101, 666, 859, 1491, 1734, 1987
BseLI CCNNNNNNNGG 2 cut(s) 533, 1862
BseMI GCAATG 3 cut(s) 384, 1150, 1309
BseMII CTCAG 4 cut(s) 163, 980, 1718, 1960
BseNI ACTGG 2 cut(s) 340, 902
BseRI GAGGAG 3 cut(s) 836, 1128, 1259
BseXI GCAGC 2 cut(s) 20, 98
BsgI GTGCAG 1 cut(s) 944
Bsh1236I CGCG 2 cut(s) 1058, 1917
BshFI GGCC 2 cut(s) 248, 1467
BshNI GGYRCC 2 cut(s) 289, 724
BsiHKAI GWGCWC 1 cut(s) 369
BsiHKCI CYCGRG 2 cut(s) 542, 1345
BsiSI CCGG 3 cut(s) 249, 485, 799
BslFI GGGAC 1 cut(s) 1866
BslI CCNNNNNNNGG 2 cut(s) 533, 1862
BsmAI GTCTC 1 cut(s) 1668
BsmFI GGGAC 1 cut(s) 1866
BsmI GAATGC 1 cut(s) 177
BsnI GGCC 2 cut(s) 248, 1467
Bso31I GGTCTC 1 cut(s) 1668
BsoBI CYCGRG 2 cut(s) 542, 1345
Bsp119I TTCGAA 1 cut(s) 1802
Bsp1286I GDGCHC 1 cut(s) 369
Bsp13I TCCGGA 1 cut(s) 484
Bsp1407I TGTACA 1 cut(s) 1606
BspACI CCGC 3 cut(s) 1056, 1300, 1613
BspANI GGCC 2 cut(s) 248, 1467
BspCNI CTCAG 4 cut(s) 162, 981, 1717, 1959
BspEI TCCGGA 1 cut(s) 484
BspFNI CGCG 2 cut(s) 1058, 1917
BspLI GGNNCC 5 cut(s) 155, 291, 726, 797, 1854
BspPI GGATC 2 cut(s) 58, 1084
BspQI GCTCTTC 1 cut(s) 1453
BspT104I TTCGAA 1 cut(s) 1802
BspT107I GGYRCC 2 cut(s) 289, 724
BspTNI GGTCTC 1 cut(s) 1668
BsrDI GCAATG 3 cut(s) 384, 1150, 1309
BsrFI RCCGGY 1 cut(s) 248
BsrGI TGTACA 1 cut(s) 1606
BsrI ACTGG 2 cut(s) 340, 902
BssAI RCCGGY 1 cut(s) 248
BssECI CCNNGG 4 cut(s) 243, 285, 508, 543
BssNI GRCGYC 2 cut(s) 135, 725
Bst2UI CCWGG 3 cut(s) 245, 286, 510
Bst4CI ACNGT 1 cut(s) 631
Bst6I CTCTTC 2 cut(s) 591, 1453
BstACI GRCGYC 2 cut(s) 135, 725
BstAUI TGTACA 1 cut(s) 1606
BstBAI YACGTR 1 cut(s) 266
BstBI TTCGAA 1 cut(s) 1802
BstC8I GCNNGC 5 cut(s) 31, 250, 260, 1465, 1580
BstDEI CTNAG 8 cut(s) 149, 989, 1094, 1237, 1704, 1754, 1946, 1971
BstEII GGTNACC 1 cut(s) 206
BstF5I GGATG 6 cut(s) 101, 666, 859, 1491, 1734, 1987
BstFNI CGCG 2 cut(s) 1058, 1917
BstH2I RGCGCY 1 cut(s) 728
BstHHI GCGC 2 cut(s) 727, 1917
BstMAI GTCTC 1 cut(s) 1668
BstMWI GCNNNNNNNGC 3 cut(s) 228, 1055, 1921
BstNI CCWGG 3 cut(s) 245, 286, 510
BstNSI RCATGY 4 cut(s) 33, 74, 1150, 1613
BstPI GGTNACC 1 cut(s) 206
BstSCI CCNGG 3 cut(s) 243, 284, 508
BstSFI CTRYAG 1 cut(s) 1644
BstUI CGCG 2 cut(s) 1058, 1917
BstV1I GCAGC 2 cut(s) 20, 98
BstV2I GAAGAC 3 cut(s) 1274, 1541, 1824
BstX2I RGATCY 1 cut(s) 1974
BstXI CCANNNNNNTGG 1 cut(s) 218
BstYI RGATCY 1 cut(s) 1974
BsuI GTATCC 1 cut(s) 1576
BsuRI GGCC 2 cut(s) 248, 1467
BtsCI GGATG 6 cut(s) 101, 666, 859, 1491, 1734, 1987
BtsI GCAGTG 1 cut(s) 1155
BtsIMutI CAGTG 2 cut(s) 369, 1155
Cac8I GCNNGC 5 cut(s) 31, 250, 260, 1465, 1580
CfoI GCGC 2 cut(s) 727, 1917
Cfr10I RCCGGY 1 cut(s) 248
Cfr13I GGNCC 1 cut(s) 1853
CseI GACGC 2 cut(s) 143, 220
Csp6I GTAC 5 cut(s) 282, 290, 349, 1186, 1607
CviQI GTAC 5 cut(s) 282, 290, 349, 1186, 1607
DdeI CTNAG 8 cut(s) 149, 989, 1094, 1237, 1704, 1754, 1946, 1971
DinI GGCGCC 1 cut(s) 726
DraI TTTAAA 1 cut(s) 853
DraIII CACNNNGTG 1 cut(s) 671
EaeI YGGCCR 2 cut(s) 246, 1465
Eam1104I CTCTTC 2 cut(s) 591, 1453
EarI CTCTTC 2 cut(s) 591, 1453
Eco31I GGTCTC 1 cut(s) 1668
Eco32I GATATC 1 cut(s) 550
Eco47I GGWCC 1 cut(s) 1853
Eco57I CTGAAG 3 cut(s) 615, 1065, 1427
Eco72I CACGTG 1 cut(s) 266
Eco88I CYCGRG 2 cut(s) 542, 1345
Eco91I GGTNACC 1 cut(s) 206
EcoO65I GGTNACC 1 cut(s) 206
EcoRI GAATTC 2 cut(s) 897, 1127
EcoRII CCWGG 3 cut(s) 243, 284, 508
EcoRV GATATC 1 cut(s) 550
EcoT22I ATGCAT 3 cut(s) 35, 1152, 1419
EgeI GGCGCC 1 cut(s) 726
EheI GGCGCC 1 cut(s) 726
FalI AAGNNNNNCTT 2 cut(s) 1077, 1109
FaqI GGGAC 1 cut(s) 1866
FauI CCCGC 1 cut(s) 1307
FbaI TGATCA 2 cut(s) 556, 573
Fnu4HI GCNGC 2 cut(s) 9, 87
FokI GGATG 6 cut(s) 88, 673, 846, 1498, 1741, 1994
Fsp4HI GCNGC 2 cut(s) 9, 87
FspBI CTAG 4 cut(s) 321, 519, 939, 948
GlaI GCGC 2 cut(s) 726, 1916
GluI GCNGC 2 cut(s) 9, 87
GsuI CTGGAG 2 cut(s) 1881, 1907
HaeII RGCGCY 1 cut(s) 728
HaeIII GGCC 2 cut(s) 248, 1467
HapII CCGG 3 cut(s) 249, 485, 799
HgaI GACGC 2 cut(s) 143, 220
HhaI GCGC 2 cut(s) 727, 1917
Hin1I GRCGYC 2 cut(s) 135, 725
Hin6I GCGC 2 cut(s) 725, 1915
HinP1I GCGC 2 cut(s) 725, 1915
HincII GTYRAC 2 cut(s) 142, 1592
HindII GTYRAC 2 cut(s) 142, 1592
HindIII AAGCTT 1 cut(s) 933
HpaII CCGG 3 cut(s) 249, 485, 799
HphI GGTGA 5 cut(s) 56, 218, 478, 698, 1120
Hpy166II GTNNAC 5 cut(s) 142, 269, 1509, 1592, 1813
Hpy188I TCNGA 4 cut(s) 40, 1076, 1287, 1570
Hpy188III TCNNGA 8 cut(s) 151, 326, 485, 658, 970, 1252, 1345, 1556
Hpy8I GTNNAC 5 cut(s) 142, 269, 1509, 1592, 1813
HpyAV CCTTC 8 cut(s) 35, 41, 167, 725, 739, 1330, 1688, 1752
HpyCH4III ACNGT 1 cut(s) 631
HpyCH4IV ACGT 1 cut(s) 265
HpyF10VI GCNNNNNNNGC 3 cut(s) 228, 1055, 1921
HpyF3I CTNAG 8 cut(s) 149, 989, 1094, 1237, 1704, 1754, 1946, 1971
HpySE526I ACGT 1 cut(s) 265
Hsp92I GRCGYC 2 cut(s) 135, 725
HspAI GCGC 2 cut(s) 725, 1915
KasI GGCGCC 1 cut(s) 724
Kpn2I TCCGGA 1 cut(s) 484
KpnI GGTACC 1 cut(s) 293
KroI GCCGGC 1 cut(s) 248
KroNI GCCGGC 1 cut(s) 250
Ksp22I TGATCA 2 cut(s) 556, 573
LguI GCTCTTC 1 cut(s) 1453
LmnI GCTCC 4 cut(s) 5, 153, 189, 1575
Lsp1109I GCAGC 2 cut(s) 20, 98
LweI GCATC 5 cut(s) 261, 382, 612, 1164, 1944
MaeI CTAG 4 cut(s) 321, 519, 939, 948
MaeII ACGT 1 cut(s) 265
MaeIII GTNAC 6 cut(s) 206, 663, 706, 748, 1217, 1229
MboII GAAGA 8 cut(s) 608, 985, 1223, 1274, 1403, 1470, 1546, 1829
MflI RGATCY 1 cut(s) 1974
MhlI GDGCHC 1 cut(s) 369
MlsI TGGCCA 1 cut(s) 1467
MluCI AATT 7 cut(s) 438, 897, 1101, 1118, 1127, 1288, 1858
MluNI TGGCCA 1 cut(s) 1467
Mly113I GGCGCC 1 cut(s) 725
MlyI GAGTC 3 cut(s) 688, 1036, 1625
MmeI TCCRAC 3 cut(s) 324, 874, 1651
Mox20I TGGCCA 1 cut(s) 1467
Mph1103I ATGCAT 3 cut(s) 35, 1152, 1419
MroI TCCGGA 1 cut(s) 484
MroNI GCCGGC 1 cut(s) 248
MroXI GAANNNNTTC 1 cut(s) 177
MscI TGGCCA 1 cut(s) 1467
MseI TTAA 4 cut(s) 852, 1167, 1412, 1929
MslI CAYNNNNRTG 5 cut(s) 164, 372, 575, 659, 1206
Msp20I TGGCCA 1 cut(s) 1467
MspI CCGG 3 cut(s) 249, 485, 799
MspR9I CCNGG 3 cut(s) 245, 286, 510
Mva1269I GAATGC 1 cut(s) 177
MvaI CCWGG 3 cut(s) 245, 286, 510
MvnI CGCG 2 cut(s) 1058, 1917
MwoI GCNNNNNNNGC 3 cut(s) 228, 1055, 1921
NaeI GCCGGC 1 cut(s) 250
NarI GGCGCC 1 cut(s) 725
NgoMIV GCCGGC 1 cut(s) 248
NlaIV GGNNCC 5 cut(s) 155, 291, 726, 797, 1854
NmeAIII GCCGAG 1 cut(s) 1141
NmuCI GTSAC 4 cut(s) 206, 663, 706, 1217
NsiI ATGCAT 3 cut(s) 35, 1152, 1419
NspI RCATGY 4 cut(s) 33, 74, 1150, 1613
NspV TTCGAA 1 cut(s) 1802
OliI CACNNNNGTG 1 cut(s) 1206
PaeI GCATGC 1 cut(s) 33
PaeR7I CTCGAG 1 cut(s) 1345
PciSI GCTCTTC 1 cut(s) 1453
PctI GAATGC 1 cut(s) 177
PdiI GCCGGC 1 cut(s) 250
PdmI GAANNNNTTC 1 cut(s) 177
PfeI GAWTC 8 cut(s) 239, 513, 650, 928, 1088, 1341, 1892, 1952
PflFI GACNNNGTC 1 cut(s) 965
PflMI CCANNNNNTGG 1 cut(s) 1862
PkrI GCNGC 2 cut(s) 10, 88
PleI GAGTC 3 cut(s) 688, 1035, 1625
PluTI GGCGCC 1 cut(s) 728
PmaCI CACGTG 1 cut(s) 266
PmlI CACGTG 1 cut(s) 266
PpsI GAGTC 3 cut(s) 688, 1035, 1625
Ppu21I YACGTR 1 cut(s) 266
PsiI TTATAA 2 cut(s) 299, 1478
Psp6I CCWGG 3 cut(s) 243, 284, 508
PspCI CACGTG 1 cut(s) 266
PspEI GGTNACC 1 cut(s) 206
PspGI CCWGG 3 cut(s) 243, 284, 508
PspN4I GGNNCC 5 cut(s) 155, 291, 726, 797, 1854
PspPI GGNCC 1 cut(s) 1853
PsuI RGATCY 1 cut(s) 1974
PsyI GACNNNGTC 1 cut(s) 965
RsaI GTAC 5 cut(s) 283, 291, 350, 1187, 1608
RsaNI GTAC 5 cut(s) 282, 290, 349, 1186, 1607
RseI CAYNNNNRTG 5 cut(s) 164, 372, 575, 659, 1206
SapI GCTCTTC 1 cut(s) 1453
SaqAI TTAA 4 cut(s) 852, 1167, 1412, 1929
SatI GCNGC 2 cut(s) 9, 87
Sau96I GGNCC 1 cut(s) 1853
ScaI AGTACT 1 cut(s) 1187
SchI GAGTC 3 cut(s) 688, 1036, 1625
ScrFI CCNGG 3 cut(s) 245, 286, 510
SduI GDGCHC 1 cut(s) 369
SfaNI GCATC 5 cut(s) 261, 382, 612, 1164, 1944
SfcI CTRYAG 1 cut(s) 1644
SfoI GGCGCC 1 cut(s) 726
Sfr274I CTCGAG 1 cut(s) 1345
SfuI TTCGAA 1 cut(s) 1802
SinI GGWCC 1 cut(s) 1853
SlaI CTCGAG 1 cut(s) 1345
SmiMI CAYNNNNRTG 5 cut(s) 164, 372, 575, 659, 1206
SmlI CTYRAG 2 cut(s) 1345, 1692
SmoI CTYRAG 2 cut(s) 1345, 1692
SphI GCATGC 1 cut(s) 33
Sse9I AATT 7 cut(s) 438, 897, 1101, 1118, 1127, 1288, 1858
SsiI CCGC 3 cut(s) 1056, 1300, 1613
SspDI GGCGCC 1 cut(s) 724
SspMI CTAG 4 cut(s) 321, 519, 939, 948
StyD4I CCNGG 3 cut(s) 243, 284, 508
TaaI ACNGT 1 cut(s) 631
TaiI ACGT 1 cut(s) 268
TaqI TCGA 2 cut(s) 1346, 1802
TasI AATT 7 cut(s) 438, 897, 1101, 1118, 1127, 1288, 1858
TatI WGTACW 3 cut(s) 348, 1185, 1606
TfiI GAWTC 8 cut(s) 239, 513, 650, 928, 1088, 1341, 1892, 1952
Tru1I TTAA 4 cut(s) 852, 1167, 1412, 1929
Tru9I TTAA 4 cut(s) 852, 1167, 1412, 1929
TscAI CASTG 2 cut(s) 376, 1162
TseFI GTSAC 4 cut(s) 206, 663, 706, 1217
TseI GCWGC 2 cut(s) 8, 86
Tsp45I GTSAC 4 cut(s) 206, 663, 706, 1217
TspDTI ATGAA 4 cut(s) 521, 825, 1140, 1502
TspGWI ACGGA 1 cut(s) 110
TspRI CASTG 2 cut(s) 376, 1162
Tth111I GACNNNGTC 1 cut(s) 965
Van91I CCANNNNNTGG 1 cut(s) 1862
VpaK11BI GGWCC 1 cut(s) 1853
XapI RAATTY 6 cut(s) 438, 897, 1101, 1118, 1127, 1288
XceI RCATGY 4 cut(s) 33, 74, 1150, 1613
XhoI CTCGAG 1 cut(s) 1345
XmnI GAANNNNTTC 1 cut(s) 177
XspI CTAG 4 cut(s) 321, 519, 939, 948
ZrmI AGTACT 1 cut(s) 1187
Zsp2I ATGCAT 3 cut(s) 35, 1152, 1419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.