Rw1G006340
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
12989069 .. 12991069
2001 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G006340.1

Sequence Viewer

Length: 2001 bp
ATGGGAGCATCAAAGCAAACAGATTCAGCATGCATTTCAGAAGGTGAAGGATCATCATGTGTAGAGCAACATGCTGTCATTGAAGCAGCACCAATTGTGTCATCCTACAATGACAAAATCCGTCCTCTCCTTGACGCCATTGACAAGCTCAGGAGCCTCATGGTTATGGAGGAAGGCATTCAGCTCCCCACCATTGTTGTTGTAGGTGACCAATCATCTGGCAAGTCAAGCGTCCTTGAATCCCTGGCCGGCATCAGCCTGCCACGTGGCCAAGGTATCTGCACCAGGGTACCCCTTATAATGAGGCTTCAACACCACTCTAGTCCTGAACCAGAGTTCCGGTTGGAGTACAATGGCAAAGTTGAGCACACTGATGAGGTCAAAATTGCTGATGATATTGTCAATGCCACCAATGTTATTGCTGGTGGAGGTAAGGGAATTTCTAACACCCCATTGACTTTGTTGGTGAAAAAGAATGGTGTTCCGGATTTGACTATGGTTGATCTCCCTGGAATCACTAGAGTTCCTGTTCATGGTCAGCCCGAGGATATCTATGATCAAATCAAAGACATGATCATGGATTATATCAAGCCTGAAGAGAGCATCATTCTCAATGTGTTGTCTGCTACTGTTGATTTTACAACTTGTGAATCCATCAGGATGTCACAGAGTGTGGATAGAACTGGTGATAGGACCCTGGCTGTGGTCACAAAGGTTGATAAGGCGCCCGAAGGACTATTAGAGAAGGTTACAGCAGATGATGTTGGCATTGGTCTTGGTTATATATGTGTGAGGAACCGGATTGGAGATGAAACTTATGAGGAGGCAAGGGCTAAATCTCAACAACTTTTTCAAACTCATCCTTTGCTATCCAAGATTGACAAATCTATGGTTGGAATTCCAGTTCTGGCTCAAAAGTTGGTGCAGATTCAAGCTTCTAGCATAGCTAGAAACTTGCCAGACATTGTCAAGAAGATAAATGACAGGCTGAGTTCTTGTCTTTCGGAGTTGAACAAAATGCCAAAGAGTCTGTCATCTGTTGCTGAAGCCATGACCGCGTTTATGCAGATCATCGGATTATCAAAAGAATCTCTTAGGAAAATTCTGATGAGAGGAGAATTTGATGAATTTCCTGAAGACCAGCACATGCATTGCACTGCTCGGCTCTATAAGATGCTCAATCAGTACTCAGATCAACTTCACAAGTGTGAAGAAAGTGACCCAAAAAGTAACTTCTTAGTAGAGGAGATCAAGATTTTGGAGGAAGCAAATGGTATTAGTCTTCCGAATTTTGTTCCCCGAAATGCTTTTCTTGTTATCTTGCAGGGAAAAGTGAAGGGAATCTCGAGCATACCTGTTGGATTTGTTGAGAAGGTTTGGAGTTATATTGAAGAAGTGGTTATGTCTGTGTTAATGCATAATACAGAAAACTATTATCAGCTTCAGGTATGCACCAGAAGAGCTGGCCATAATCTTATAACAAGGATGAAAGAAAGGTCAGTTGAGTGGACGATGGAGATGGTGGAAATGGAGAAGCTGACTGATTATACAGGTAATCCAGAATATATATCCGAATGGAGCAGGCTGATGGGTCAACAAGACGCATTTGTACATGCAGTGTTATCTAAAAATGAATCTACGATCTCTATAGAGGGTATTGGGGAAGTTGAAGTTGGAGACCTTCGGCAGTATCCTCAAGTTCTCTCTCAGGCTTTCGACTTGAAAATGAGGATCACTGCCTATTGGAAAGTTGTTCTAAGAAGGCTTGTTGATTGTATGGCTTTGCATTTGCAGTTGAGTGTTTCAAAACTTGTGAACCAAGACATGGAGATTGAGATTGTGAATGAGTTGATGGGACCAAATTGTGGTGGTGGGATTGAGAAAATGCTGGTGGAATCTCCAGCAGTTGCCACCAAGCGCGAGAAGCTGATTAAGAGCATCAAAAAGCTCAAGGATTCCAAAGAGATTGTTGCTAAGATCCTGGATGGTGTTGCTACCTAA

Protein Analysis

666

Amino Acids

74.02

Weight (kDa)

5.47

Isoelectric Point (pI)

43.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dynamin_N PF00350 65 - 239 1.2e-40 Dynamin family
Dynamin_M PF01031 247 - 529 3.5e-63 Dynamin central region
GED PF02212 569 - 660 1.2e-10 Dynamin GTPase effector domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000365)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G60500 AT1G60530
fragaria_vesca FvH4_4g34670 FvH4_7g03430 FvH4_7g03440 FvH4_7g03780
malus_domestica MD02G1282600.v1.1 MD02G1282700.v1.1 MD02G1282900.v1.1 MD14G1008400.v1.1 MD14G1008800.v1.1 MD14G1008900.v1.1 MD14G1009000.v1.1 MD14G1009200.v1.1 MD14G1009300.v1.1
prunus_persica Prupe.2G039500_v2.0.a1 Prupe.2G039600_v2.0.a1 Prupe.2G039800_v2.0.a1 Prupe.2G039900_v2.0.a1 Prupe.2G040000_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015300_v2.0.a1
pyrus_communis pycom02g24110 pycom02g24120 pycom14g00720 pycom14g00740 pycom14g00780
rosa_chinensis RchiOBHm_Chr1g0325781 RchiOBHm_Chr1g0326171 RchiOBHm_Chr1g0326211 RchiOBHm_Chr1g0327001 RchiOBHm_Chr1g0327051 RchiOBHm_Chr1g0327071 RchiOBHm_Chr1g0327091 RchiOBHm_Chr1g0327111 RchiOBHm_Chr2g0127731 RchiOBHm_Chr2g0127741 RchiOBHm_Chr4g0444021
rosa_laevigata RLG00000005864 RLG00000005866 RLG00000030044 RLG00000030045 RLG00000030047 RLG00000030048 RLG00000030083 RLG00000030106
rosa_multiflora Rmu_sc0000795.1_g000013 Rmu_sc0000795.1_g000046 Rmu_sc0000795.1_g000049 Rmu_sc0004240.1_g000005 Rmu_sc0004240.1_g000006 Rmu_sc0006009.1_g000005 Rmu_sc0015522.1_g000011 Rmu_sc0025852.1_g000001
rosa_roxburghii Rroxscaffold_4G00323340 Rroxscaffold_4G00323420 Rroxscaffold_4G00323950 Rroxscaffold_4G00324390 Rroxscaffold_5G00384590
rosa_rugosa Rorug01G0054400 Rorug01G0057700 Rorug01G0062800 Rorug01G0062900 Rorug01G0063200 Rorug01G0063300 Rorug04G0349000
rosa_samantha Rh1AG069900 Rh1AG070200 Rh1AG070400 Rh1AG070700 Rh1AG071000 Rh1AG074600 Rh1AG079800 Rh1AG080000 Rh1AG080600 Rh1BG057600 Rh1BG060000 Rh1BG064000 Rh1CG070400 Rh1CG073100 Rh1CG077500 Rh1CG077600 Rh1CG078000 Rh1CG078600 Rh1DG075100 Rh1DG079900 Rh1DG084000 Rh1DG084100 Rh1DG084400 Rh1DG084900 Rh1DG085000 Rh2BG332700 Rh4AG409800 Rh4BG420900 Rh4CG435200 Rh4DG416100
rosa_wichuraiana Rw1G005780 Rw1G005990 Rw1G006330 Rw1G006340 Rw1G006380 Rw1G006390 Rw2G026260 Rw4G035200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 299, 1478
Acc65I GGTACC 1 cut(s) 289
AccB1I GGYRCC 2 cut(s) 289, 724
AccB7I CCANNNNNTGG 2 cut(s) 1825, 1865
AccII CGCG 2 cut(s) 1058, 1920
AccIII TCCGGA 1 cut(s) 484
AciI CCGC 1 cut(s) 1056
AclWI GGATC 3 cut(s) 58, 1739, 1972
AcoI YGGCCR 3 cut(s) 246, 268, 1465
AcsI RAATTY 6 cut(s) 438, 897, 1101, 1118, 1127, 1288
AcuI CTGAAG 4 cut(s) 615, 1065, 1155, 1427
AcvI CACGTG 1 cut(s) 266
AcyI GRCGYC 2 cut(s) 135, 725
AdeI CACNNNGTG 1 cut(s) 671
AfaI GTAC 4 cut(s) 291, 350, 1187, 1611
AfiI CCNNNNNNNGG 4 cut(s) 533, 703, 1825, 1865
AjnI CCWGG 5 cut(s) 243, 284, 508, 696, 1980
AjuI GAANNNNNNNTTGG 2 cut(s) 1656, 1688
AleI CACNNNNGTG 1 cut(s) 1206
AloI GAACNNNNNNTCC 4 cut(s) 321, 353, 888, 920
AluBI AGCT 9 cut(s) 148, 184, 935, 947, 1441, 1463, 1537, 1927, 1948
AluI AGCT 9 cut(s) 148, 184, 935, 947, 1441, 1463, 1537, 1927, 1948
Alw21I GWGCWC 1 cut(s) 369
Alw26I GTCTC 1 cut(s) 1671
AlwI GGATC 3 cut(s) 58, 1739, 1972
Ama87I CYCGRG 2 cut(s) 542, 1345
Aor13HI TCCGGA 1 cut(s) 484
AoxI GGCC 3 cut(s) 246, 268, 1465
ApeKI GCWGC 1 cut(s) 86
ApoI RAATTY 6 cut(s) 438, 897, 1101, 1118, 1127, 1288
ArsI GACNNNNNNTTYG 2 cut(s) 1016, 1048
Asp700I GAANNNNTTC 1 cut(s) 177
Asp718I GGTACC 1 cut(s) 289
AspLEI GCGC 2 cut(s) 727, 1920
AspS9I GGNCC 2 cut(s) 693, 1856
AsuHPI GGTGA 4 cut(s) 56, 218, 478, 698
AvaI CYCGRG 2 cut(s) 542, 1345
AvaII GGWCC 2 cut(s) 693, 1856
BaeI ACNNNNGTAYC 2 cut(s) 273, 306
BalI TGGCCA 2 cut(s) 270, 1467
BanI GGYRCC 2 cut(s) 289, 724
BbrPI CACGTG 1 cut(s) 266
BbsI GAAGAC 2 cut(s) 1143, 1274
Bbv12I GWGCWC 1 cut(s) 369
BbvI GCAGC 1 cut(s) 98
BccI CCATC 6 cut(s) 662, 1507, 1513, 1582, 1846, 1979
BciT130I CCWGG 5 cut(s) 245, 286, 510, 698, 1982
BciVI GTATCC 1 cut(s) 1701
BclI TGATCA 2 cut(s) 556, 573
BcoDI GTCTC 1 cut(s) 1671
BfaI CTAG 4 cut(s) 321, 519, 939, 948
BfmI CTRYAG 1 cut(s) 1647
BfoI RGCGCY 1 cut(s) 728
BfuI GTATCC 1 cut(s) 1701
BisI GCNGC 1 cut(s) 87
BlsI GCNGC 1 cut(s) 88
BmcAI AGTACT 1 cut(s) 1187
Bme1390I CCNGG 5 cut(s) 245, 286, 510, 698, 1982
Bme18I GGWCC 2 cut(s) 693, 1856
BmeT110I CYCGRG 2 cut(s) 542, 1345
BmgT120I GGNCC 2 cut(s) 693, 1856
BmiI GGNNCC 6 cut(s) 155, 291, 695, 726, 797, 1857
BmrFI CCNGG 5 cut(s) 245, 286, 510, 698, 1982
BmsI GCATC 5 cut(s) 17, 261, 612, 1164, 1947
BpiI GAAGAC 2 cut(s) 1143, 1274
BpmI CTGGAG 1 cut(s) 1884
Bpu10I CCTNAGC 1 cut(s) 149
BpuEI CTTGAG 2 cut(s) 1680, 1934
BsaAI YACGTR 1 cut(s) 266
BsaHI GRCGYC 2 cut(s) 135, 725
BsaI GGTCTC 1 cut(s) 1671
BsaJI CCNNGG 6 cut(s) 243, 271, 285, 508, 543, 696
BsaWI WCCGGW 3 cut(s) 339, 484, 798
Bsc4I CCNNNNNNNGG 4 cut(s) 533, 703, 1825, 1865
Bse118I RCCGGY 1 cut(s) 248
Bse1I ACTGG 2 cut(s) 688, 902
Bse3DI GCAATG 1 cut(s) 1150
BseAI TCCGGA 1 cut(s) 484
BseBI CCWGG 5 cut(s) 245, 286, 510, 698, 1982
BseDI CCNNGG 6 cut(s) 243, 271, 285, 508, 543, 696
BseGI GGATG 5 cut(s) 101, 666, 859, 1491, 1990
BseLI CCNNNNNNNGG 4 cut(s) 533, 703, 1825, 1865
BseMI GCAATG 1 cut(s) 1150
BseMII CTCAG 4 cut(s) 163, 980, 1203, 1721
BseNI ACTGG 2 cut(s) 688, 902
BseRI GAGGAG 3 cut(s) 836, 1128, 1259
BseXI GCAGC 1 cut(s) 98
BsgI GTGCAG 2 cut(s) 265, 944
Bsh1236I CGCG 2 cut(s) 1058, 1920
BshFI GGCC 3 cut(s) 248, 270, 1467
BshNI GGYRCC 2 cut(s) 289, 724
BsiHKAI GWGCWC 1 cut(s) 369
BsiHKCI CYCGRG 2 cut(s) 542, 1345
BsiSI CCGG 4 cut(s) 249, 340, 485, 799
BslFI GGGAC 1 cut(s) 1869
BslI CCNNNNNNNGG 4 cut(s) 533, 703, 1825, 1865
BsmAI GTCTC 1 cut(s) 1671
BsmFI GGGAC 1 cut(s) 1869
BsmI GAATGC 1 cut(s) 177
BsnI GGCC 3 cut(s) 248, 270, 1467
Bso31I GGTCTC 1 cut(s) 1671
BsoBI CYCGRG 2 cut(s) 542, 1345
Bsp1286I GDGCHC 1 cut(s) 369
Bsp13I TCCGGA 1 cut(s) 484
Bsp1407I TGTACA 1 cut(s) 1609
BspACI CCGC 1 cut(s) 1056
BspANI GGCC 3 cut(s) 248, 270, 1467
BspCNI CTCAG 4 cut(s) 162, 981, 1202, 1720
BspEI TCCGGA 1 cut(s) 484
BspFNI CGCG 2 cut(s) 1058, 1920
BspLI GGNNCC 6 cut(s) 155, 291, 695, 726, 797, 1857
BspPI GGATC 3 cut(s) 58, 1739, 1972
BspQI GCTCTTC 1 cut(s) 1453
BspT107I GGYRCC 2 cut(s) 289, 724
BspTNI GGTCTC 1 cut(s) 1671
BsrDI GCAATG 1 cut(s) 1150
BsrFI RCCGGY 1 cut(s) 248
BsrGI TGTACA 1 cut(s) 1609
BsrI ACTGG 2 cut(s) 688, 902
BssAI RCCGGY 1 cut(s) 248
BssECI CCNNGG 6 cut(s) 243, 271, 285, 508, 543, 696
BssNI GRCGYC 2 cut(s) 135, 725
BssT1I CCWWGG 1 cut(s) 271
Bst2UI CCWGG 5 cut(s) 245, 286, 510, 698, 1982
Bst4CI ACNGT 1 cut(s) 631
Bst6I CTCTTC 2 cut(s) 591, 1453
BstACI GRCGYC 2 cut(s) 135, 725
BstAUI TGTACA 1 cut(s) 1609
BstBAI YACGTR 1 cut(s) 266
BstC8I GCNNGC 5 cut(s) 31, 250, 260, 1465, 1583
BstDEI CTNAG 8 cut(s) 149, 989, 1094, 1189, 1237, 1707, 1757, 1974
BstEII GGTNACC 1 cut(s) 206
BstF5I GGATG 5 cut(s) 101, 666, 859, 1491, 1990
BstFNI CGCG 2 cut(s) 1058, 1920
BstH2I RGCGCY 1 cut(s) 728
BstHHI GCGC 2 cut(s) 727, 1920
BstMAI GTCTC 1 cut(s) 1671
BstMWI GCNNNNNNNGC 3 cut(s) 228, 1055, 1924
BstNI CCWGG 5 cut(s) 245, 286, 510, 698, 1982
BstNSI RCATGY 4 cut(s) 33, 74, 1150, 1616
BstPI GGTNACC 1 cut(s) 206
BstSCI CCNGG 5 cut(s) 243, 284, 508, 696, 1980
BstSFI CTRYAG 1 cut(s) 1647
BstUI CGCG 2 cut(s) 1058, 1920
BstV1I GCAGC 1 cut(s) 98
BstV2I GAAGAC 2 cut(s) 1143, 1274
BstX2I RGATCY 1 cut(s) 1977
BstXI CCANNNNNNTGG 1 cut(s) 218
BstYI RGATCY 1 cut(s) 1977
BsuI GTATCC 1 cut(s) 1701
BsuRI GGCC 3 cut(s) 248, 270, 1467
BtsCI GGATG 5 cut(s) 101, 666, 859, 1491, 1990
BtsI GCAGTG 3 cut(s) 1155, 1623, 1734
BtsIMutI CAGTG 4 cut(s) 369, 1155, 1623, 1734
Cac8I GCNNGC 5 cut(s) 31, 250, 260, 1465, 1583
CfoI GCGC 2 cut(s) 727, 1920
Cfr10I RCCGGY 1 cut(s) 248
Cfr13I GGNCC 2 cut(s) 693, 1856
CseI GACGC 3 cut(s) 143, 220, 1610
Csp6I GTAC 4 cut(s) 290, 349, 1186, 1610
CspCI CAANNNNNGTGG 2 cut(s) 178, 213
CviQI GTAC 4 cut(s) 290, 349, 1186, 1610
DdeI CTNAG 8 cut(s) 149, 989, 1094, 1189, 1237, 1707, 1757, 1974
DinI GGCGCC 1 cut(s) 726
DraIII CACNNNGTG 1 cut(s) 671
EaeI YGGCCR 3 cut(s) 246, 268, 1465
Eam1104I CTCTTC 2 cut(s) 591, 1453
EarI CTCTTC 2 cut(s) 591, 1453
Eco130I CCWWGG 1 cut(s) 271
Eco31I GGTCTC 1 cut(s) 1671
Eco32I GATATC 1 cut(s) 550
Eco47I GGWCC 2 cut(s) 693, 1856
Eco57I CTGAAG 4 cut(s) 615, 1065, 1155, 1427
Eco72I CACGTG 1 cut(s) 266
Eco88I CYCGRG 2 cut(s) 542, 1345
Eco91I GGTNACC 1 cut(s) 206
EcoO109I RGGNCCY 1 cut(s) 693
EcoO65I GGTNACC 1 cut(s) 206
EcoRI GAATTC 1 cut(s) 897
EcoRII CCWGG 5 cut(s) 243, 284, 508, 696, 1980
EcoRV GATATC 1 cut(s) 550
EcoT14I CCWWGG 1 cut(s) 271
EcoT22I ATGCAT 3 cut(s) 35, 1152, 1419
EgeI GGCGCC 1 cut(s) 726
EheI GGCGCC 1 cut(s) 726
ErhI CCWWGG 1 cut(s) 271
FalI AAGNNNNNCTT 2 cut(s) 1077, 1109
FaqI GGGAC 1 cut(s) 1869
FbaI TGATCA 2 cut(s) 556, 573
Fnu4HI GCNGC 1 cut(s) 87
FokI GGATG 5 cut(s) 88, 673, 846, 1498, 1997
Fsp4HI GCNGC 1 cut(s) 87
FspBI CTAG 4 cut(s) 321, 519, 939, 948
GlaI GCGC 2 cut(s) 726, 1919
GluI GCNGC 1 cut(s) 87
GsuI CTGGAG 1 cut(s) 1884
HaeII RGCGCY 1 cut(s) 728
HaeIII GGCC 3 cut(s) 248, 270, 1467
HapII CCGG 4 cut(s) 249, 340, 485, 799
HgaI GACGC 3 cut(s) 143, 220, 1610
HhaI GCGC 2 cut(s) 727, 1920
Hin1I GRCGYC 2 cut(s) 135, 725
Hin6I GCGC 2 cut(s) 725, 1918
HinP1I GCGC 2 cut(s) 725, 1918
HincII GTYRAC 1 cut(s) 1595
HindII GTYRAC 1 cut(s) 1595
HindIII AAGCTT 1 cut(s) 933
HpaII CCGG 4 cut(s) 249, 340, 485, 799
HphI GGTGA 4 cut(s) 56, 218, 478, 698
Hpy166II GTNNAC 3 cut(s) 1509, 1595, 1816
Hpy188I TCNGA 7 cut(s) 40, 1006, 1076, 1107, 1192, 1287, 1573
Hpy188III TCNNGA 9 cut(s) 151, 326, 485, 658, 970, 1133, 1252, 1345, 1559
Hpy8I GTNNAC 3 cut(s) 1509, 1595, 1816
HpyAV CCTTC 9 cut(s) 35, 41, 167, 725, 739, 1330, 1366, 1691, 1755
HpyCH4III ACNGT 1 cut(s) 631
HpyCH4IV ACGT 1 cut(s) 265
HpyF10VI GCNNNNNNNGC 3 cut(s) 228, 1055, 1924
HpyF3I CTNAG 8 cut(s) 149, 989, 1094, 1189, 1237, 1707, 1757, 1974
HpySE526I ACGT 1 cut(s) 265
Hsp92I GRCGYC 2 cut(s) 135, 725
HspAI GCGC 2 cut(s) 725, 1918
KasI GGCGCC 1 cut(s) 724
Kpn2I TCCGGA 1 cut(s) 484
KpnI GGTACC 1 cut(s) 293
KroI GCCGGC 1 cut(s) 248
KroNI GCCGGC 1 cut(s) 250
Ksp22I TGATCA 2 cut(s) 556, 573
LguI GCTCTTC 1 cut(s) 1453
LmnI GCTCC 4 cut(s) 5, 153, 189, 1578
Lsp1109I GCAGC 1 cut(s) 98
LweI GCATC 5 cut(s) 17, 261, 612, 1164, 1947
MaeI CTAG 4 cut(s) 321, 519, 939, 948
MaeII ACGT 1 cut(s) 265
MaeIII GTNAC 6 cut(s) 206, 663, 706, 748, 1217, 1229
MboII GAAGA 7 cut(s) 608, 985, 1148, 1223, 1274, 1403, 1470
MfeI CAATTG 1 cut(s) 93
MflI RGATCY 1 cut(s) 1977
MhlI GDGCHC 1 cut(s) 369
MlsI TGGCCA 2 cut(s) 270, 1467
MluCI AATT 9 cut(s) 93, 384, 438, 897, 1101, 1118, 1127, 1288, 1861
MluNI TGGCCA 2 cut(s) 270, 1467
Mly113I GGCGCC 1 cut(s) 725
MlyI GAGTC 1 cut(s) 1036
MmeI TCCRAC 4 cut(s) 324, 874, 1339, 1654
Mox20I TGGCCA 2 cut(s) 270, 1467
Mph1103I ATGCAT 3 cut(s) 35, 1152, 1419
MroI TCCGGA 1 cut(s) 484
MroNI GCCGGC 1 cut(s) 248
MroXI GAANNNNTTC 1 cut(s) 177
MscI TGGCCA 2 cut(s) 270, 1467
MseI TTAA 2 cut(s) 1412, 1932
MslI CAYNNNNRTG 5 cut(s) 164, 372, 575, 659, 1206
Msp20I TGGCCA 2 cut(s) 270, 1467
MspI CCGG 4 cut(s) 249, 340, 485, 799
MspR9I CCNGG 5 cut(s) 245, 286, 510, 698, 1982
MunI CAATTG 1 cut(s) 93
Mva1269I GAATGC 1 cut(s) 177
MvaI CCWGG 5 cut(s) 245, 286, 510, 698, 1982
MvnI CGCG 2 cut(s) 1058, 1920
MwoI GCNNNNNNNGC 3 cut(s) 228, 1055, 1924
NaeI GCCGGC 1 cut(s) 250
NarI GGCGCC 1 cut(s) 725
NgoMIV GCCGGC 1 cut(s) 248
NlaIV GGNNCC 6 cut(s) 155, 291, 695, 726, 797, 1857
NmeAIII GCCGAG 1 cut(s) 1141
NmuCI GTSAC 4 cut(s) 206, 663, 706, 1217
NsiI ATGCAT 3 cut(s) 35, 1152, 1419
NspI RCATGY 4 cut(s) 33, 74, 1150, 1616
OliI CACNNNNGTG 1 cut(s) 1206
PaeI GCATGC 1 cut(s) 33
PaeR7I CTCGAG 1 cut(s) 1345
PciSI GCTCTTC 1 cut(s) 1453
PctI GAATGC 1 cut(s) 177
PdiI GCCGGC 1 cut(s) 250
PdmI GAANNNNTTC 1 cut(s) 177
PflFI GACNNNGTC 1 cut(s) 965
PflMI CCANNNNNTGG 2 cut(s) 1825, 1865
PfoI TCCNGGA 1 cut(s) 1980
PkrI GCNGC 1 cut(s) 88
PleI GAGTC 1 cut(s) 1035
PluTI GGCGCC 1 cut(s) 728
PmaCI CACGTG 1 cut(s) 266
PmlI CACGTG 1 cut(s) 266
PpsI GAGTC 1 cut(s) 1035
Ppu21I YACGTR 1 cut(s) 266
PpuMI RGGWCCY 1 cut(s) 693
PsiI TTATAA 2 cut(s) 299, 1478
Psp5II RGGWCCY 1 cut(s) 693
Psp6I CCWGG 5 cut(s) 243, 284, 508, 696, 1980
PspCI CACGTG 1 cut(s) 266
PspEI GGTNACC 1 cut(s) 206
PspGI CCWGG 5 cut(s) 243, 284, 508, 696, 1980
PspN4I GGNNCC 6 cut(s) 155, 291, 695, 726, 797, 1857
PspPI GGNCC 2 cut(s) 693, 1856
PspPPI RGGWCCY 1 cut(s) 693
PsuI RGATCY 1 cut(s) 1977
PsyI GACNNNGTC 1 cut(s) 965
RsaI GTAC 4 cut(s) 291, 350, 1187, 1611
RsaNI GTAC 4 cut(s) 290, 349, 1186, 1610
RseI CAYNNNNRTG 5 cut(s) 164, 372, 575, 659, 1206
SapI GCTCTTC 1 cut(s) 1453
SaqAI TTAA 2 cut(s) 1412, 1932
SatI GCNGC 1 cut(s) 87
Sau96I GGNCC 2 cut(s) 693, 1856
ScaI AGTACT 1 cut(s) 1187
SchI GAGTC 1 cut(s) 1036
ScrFI CCNGG 5 cut(s) 245, 286, 510, 698, 1982
SduI GDGCHC 1 cut(s) 369
SfaNI GCATC 5 cut(s) 17, 261, 612, 1164, 1947
SfcI CTRYAG 1 cut(s) 1647
SfoI GGCGCC 1 cut(s) 726
Sfr274I CTCGAG 1 cut(s) 1345
SinI GGWCC 2 cut(s) 693, 1856
SlaI CTCGAG 1 cut(s) 1345
SmiMI CAYNNNNRTG 5 cut(s) 164, 372, 575, 659, 1206
SmlI CTYRAG 3 cut(s) 1345, 1695, 1949
SmoI CTYRAG 3 cut(s) 1345, 1695, 1949
SphI GCATGC 1 cut(s) 33
Sse9I AATT 9 cut(s) 93, 384, 438, 897, 1101, 1118, 1127, 1288, 1861
SsiI CCGC 1 cut(s) 1056
SspDI GGCGCC 1 cut(s) 724
SspMI CTAG 4 cut(s) 321, 519, 939, 948
StyD4I CCNGG 5 cut(s) 243, 284, 508, 696, 1980
StyI CCWWGG 1 cut(s) 271
TaaI ACNGT 1 cut(s) 631
TaiI ACGT 1 cut(s) 268
TaqI TCGA 2 cut(s) 1346, 1716
TasI AATT 9 cut(s) 93, 384, 438, 897, 1101, 1118, 1127, 1288, 1861
TatI WGTACW 3 cut(s) 348, 1185, 1609
Tru1I TTAA 2 cut(s) 1412, 1932
Tru9I TTAA 2 cut(s) 1412, 1932
TscAI CASTG 4 cut(s) 376, 1162, 1623, 1741
TseFI GTSAC 4 cut(s) 206, 663, 706, 1217
TseI GCWGC 1 cut(s) 86
Tsp45I GTSAC 4 cut(s) 206, 663, 706, 1217
TspDTI ATGAA 5 cut(s) 521, 825, 1140, 1502, 1647
TspGWI ACGGA 1 cut(s) 110
TspRI CASTG 4 cut(s) 376, 1162, 1623, 1741
Tth111I GACNNNGTC 1 cut(s) 965
Van91I CCANNNNNTGG 2 cut(s) 1825, 1865
VpaK11BI GGWCC 2 cut(s) 693, 1856
XapI RAATTY 6 cut(s) 438, 897, 1101, 1118, 1127, 1288
XceI RCATGY 4 cut(s) 33, 74, 1150, 1616
XhoI CTCGAG 1 cut(s) 1345
XmnI GAANNNNTTC 1 cut(s) 177
XspI CTAG 4 cut(s) 321, 519, 939, 948
ZrmI AGTACT 1 cut(s) 1187
Zsp2I ATGCAT 3 cut(s) 35, 1152, 1419
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.