RchiOBHm_Chr1g0325781
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
13812647 .. 13815017
2371 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55547

Sequence Viewer

Length: 2139 bp
ATGGGAAATAACAAAAACAAATCAGACACCAGGAGTAGTAGTTCAGAAATGGGAGGAAAGCATACTCAAACTGATTTAGGCGTCAAACCATCAAGCACCGTCTTCGCAAAATTTGAAGAAGGTTCATCATCATCAGTTTCACTTGCACCACGAGCACGTAATGAAGCAGACCAACAGCAACATGCCGTATCTCTCAACGTCAAAGAGGCACCGATTGTGTCTTCCTACAACGACAAAATCCGTCCCCTCCTAGATGCCGTTGACAAGCTCCGTAACCTGATGGTTATGGAAGAAGGGATCCAGCTCCCCACTATTGTCGTCGTTGGAGACCAATCATCTGGAAAGTCTAGCGTCCTGGAATCCCTCGCGAGCATCAGCCTGCCACGTGGACAAGGTATCTGCACCAGGGTGCCTCTTATAATGAGGCTTCAACACCATTCAAGTTCAGAACCGGAGCTTTCCTTGGAATACAATGGTAAAGTTGAGCGGACTGATGAGGGCAGAGTTTCTGAAGATATTGTTAAAGCGACTGATGATATTGCAGGCGGAGGTAAGGGTATCTCTAACACGCCTTTAACTCTGTTAGTGAAGAAGAATGGTGTTCCGGATTTAACAATGGTGGATCTCCCTGGAATCACCAGAGTTCCTGTTCATGGTCAGCCTGAGAATATCTATGACCAGATCAAAGATATGATCATGGAATATATAAATCCTGATCAGAGTATCATTCTGAATGTATTATCGGCTACTGTCGATTTTACCACTTGTGAATCAATTAGGATGTCACAGAGTGTGGACAAAACTGGTGAGAGGACTCTTGCCGTGGTTACAAAAGTTGACAAGGCTCCGGAGGGACTTGTAGAGAAAGTAACAGGTGATGATGTCAACATAGGGCTTGGCTATGTCTGTGTCAGGAATAGGATTGGAGAGGAAACCTATGAGGAGGCAAGGGCTTTCTCTGACCAACTATTCCAAACTCATCCTCTGCTTTCTAAAATTGATAAATCCATGGTTGGAGTTCATGTTTTAGCACAGAAGTTGGTGCAAATTCAAGCTACAAGTATAGCCAGGAGCTTACCTGAGATCGTGAAGAAGATAGATGACAAGCTGAATATTTGTCTTTCGGAGCTGAACAAACTGCCTAAAGGTCTTTCATCTTTTGCTGAGGCGATAACGGCTTTCATGCAGATAATTGGATCGTCGAAAGAATCGCTCAGTAAAATTCTTGTGAGAGGAGAATTTGATGAGTACCCAGAAGAGAAGCACAAGCATGGGACAGCTAGACTGGTTGAGTTGCTTAATCAGTATTCTGAAGAACTGCACGAGTGTGATGGAACTGATGTGGCAAGTAATTTCTTGATGCAGGAGATTAGGATTTTAGGGGAGGCAAAACGTATGAGTCTTCCAAATTTTCTTCCCCGCAGTGCTTTTCTGGTTATTTTGCAGGGAAAAGTGAAGGGAATTTCGAGTATTCCGATTCGATTTGTTGAGAAGATATGGGACTACATTGAGGATGTGATGATATCTGTGTTAATGAAACATTCAGAAAATTATTCTCAGCTTCAGTTGTGTGCTAAAAGAGCTGGTCATAATTTGATCGCCAAGATGAAAGAAAGATCAGTTAAGTGGATGATGGAGATTGTAGAAATGGAGAAGAAAACTGATTATACATGTAATCCCGAGTATGTTACTGAATGGCAAAAGCTTATGAATAATCTGGGCGGATTTCTCCATGGAGTCCTGGAGGATGAGCACAAACCTCCTAGCTTTGTTGTGGACGATATTGGCATGGTTGAAGTTGAAGTTTTTAGGCAGTACCCGCGGGATCTTTTATCTGAAGCTTTTGACTTGAAAATGCGGATGATTGCATATTGGAAGGTCGTTCTGAGAAGGCTGGTTGATTCCATGGCATTGCATTTGCAGCTAAGTATTGCCAATCTTGTGAACAAGCACATGGAGATGAAGATTGTTACAGAATTAATGGGACCGAATAATGCAGGTGGAATTGAGAAGATGCTGGAAGAGTCTCCGTCAGTAGCATTGAAGCGTGAGAAGCTGAAAAAGAGCATCAACAAGCTTAAAGAATCCAAGGAGGTTGTGGGTAAGATTATGGATGGCATTATCACGTATGGTGATTAA

Protein Analysis

712

Amino Acids

79.37

Weight (kDa)

5.92

Isoelectric Point (pI)

40.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dynamin_N PF00350 105 - 279 1.6e-40 Dynamin family
Dynamin_M PF01031 286 - 570 9e-60 Dynamin central region
GED PF02212 613 - 702 4.4e-11 Dynamin GTPase effector domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000365)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G60500 AT1G60530
fragaria_vesca FvH4_4g34670 FvH4_7g03430 FvH4_7g03440 FvH4_7g03780
malus_domestica MD02G1282600.v1.1 MD02G1282700.v1.1 MD02G1282900.v1.1 MD14G1008400.v1.1 MD14G1008800.v1.1 MD14G1008900.v1.1 MD14G1009000.v1.1 MD14G1009200.v1.1 MD14G1009300.v1.1
prunus_persica Prupe.2G039500_v2.0.a1 Prupe.2G039600_v2.0.a1 Prupe.2G039800_v2.0.a1 Prupe.2G039900_v2.0.a1 Prupe.2G040000_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015300_v2.0.a1
pyrus_communis pycom02g24110 pycom02g24120 pycom14g00720 pycom14g00740 pycom14g00780
rosa_chinensis RchiOBHm_Chr1g0325781 RchiOBHm_Chr1g0326171 RchiOBHm_Chr1g0326211 RchiOBHm_Chr1g0327001 RchiOBHm_Chr1g0327051 RchiOBHm_Chr1g0327071 RchiOBHm_Chr1g0327091 RchiOBHm_Chr1g0327111 RchiOBHm_Chr2g0127731 RchiOBHm_Chr2g0127741 RchiOBHm_Chr4g0444021
rosa_laevigata RLG00000005864 RLG00000005866 RLG00000030044 RLG00000030045 RLG00000030047 RLG00000030048 RLG00000030083 RLG00000030106
rosa_multiflora Rmu_sc0000795.1_g000013 Rmu_sc0000795.1_g000046 Rmu_sc0000795.1_g000049 Rmu_sc0004240.1_g000005 Rmu_sc0004240.1_g000006 Rmu_sc0006009.1_g000005 Rmu_sc0015522.1_g000011 Rmu_sc0025852.1_g000001
rosa_roxburghii Rroxscaffold_4G00323340 Rroxscaffold_4G00323420 Rroxscaffold_4G00323950 Rroxscaffold_4G00324390 Rroxscaffold_5G00384590
rosa_rugosa Rorug01G0054400 Rorug01G0057700 Rorug01G0062800 Rorug01G0062900 Rorug01G0063200 Rorug01G0063300 Rorug04G0349000
rosa_samantha Rh1AG069900 Rh1AG070200 Rh1AG070400 Rh1AG070700 Rh1AG071000 Rh1AG074600 Rh1AG079800 Rh1AG080000 Rh1AG080600 Rh1BG057600 Rh1BG060000 Rh1BG064000 Rh1CG070400 Rh1CG073100 Rh1CG077500 Rh1CG077600 Rh1CG078000 Rh1CG078600 Rh1DG075100 Rh1DG079900 Rh1DG084000 Rh1DG084100 Rh1DG084400 Rh1DG084900 Rh1DG085000 Rh2BG332700 Rh4AG409800 Rh4BG420900 Rh4CG435200 Rh4DG416100
rosa_wichuraiana Rw1G005780 Rw1G005990 Rw1G006330 Rw1G006340 Rw1G006380 Rw1G006390 Rw2G026260 Rw4G035200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 419
AarI CACCTGC 1 cut(s) 1988
Acc36I ACCTGC 1 cut(s) 1988
AccB1I GGYRCC 2 cut(s) 208, 409
AccBSI CCGCTC 1 cut(s) 487
AccII CGCG 2 cut(s) 368, 1822
AccIII TCCGGA 2 cut(s) 604, 847
AciI CCGC 7 cut(s) 487, 546, 1420, 1722, 1820, 1822, 1858
AclWI GGATC 5 cut(s) 292, 305, 630, 1204, 1833
AcsI RAATTY 6 cut(s) 110, 1047, 1221, 1238, 1408, 1461
AcuI CTGAAG 4 cut(s) 531, 1332, 1547, 1857
AcvI CACGTG 1 cut(s) 386
AcyI GRCGYC 1 cut(s) 81
AdeI CACNNNGTG 1 cut(s) 791
AfaI GTAC 2 cut(s) 1250, 1817
AfiI CCNNNNNNNGG 1 cut(s) 653
AflIII ACRYGT 1 cut(s) 1670
AgsI TTSAA 8 cut(s) 116, 431, 441, 1052, 1796, 1802, 1852, 2044
AjnI CCWGG 6 cut(s) 29, 354, 404, 628, 1067, 1740
AleI CACNNNNGTG 2 cut(s) 407, 1326
AloI GAACNNNNNNTCC 2 cut(s) 25, 57
Alw21I GWGCWC 2 cut(s) 157, 1755
Alw26I GTCTC 2 cut(s) 321, 2031
AlwI GGATC 5 cut(s) 292, 305, 630, 1204, 1833
Ama87I CYCGRG 1 cut(s) 1679
Aor13HI TCCGGA 2 cut(s) 604, 847
ApeKI GCWGC 1 cut(s) 1921
ApoI RAATTY 6 cut(s) 110, 1047, 1221, 1238, 1408, 1461
AseI ATTAAT 1 cut(s) 1979
AspS9I GGNCC 1 cut(s) 1985
AsuHPI GGTGA 3 cut(s) 628, 818, 887
AvaI CYCGRG 1 cut(s) 1679
AvaII GGWCC 1 cut(s) 1985
BamHI GGATCC 1 cut(s) 297
BanI GGYRCC 2 cut(s) 208, 409
BauI CACGAG 2 cut(s) 150, 1322
BbrPI CACGTG 1 cut(s) 386
BbsI GAAGAC 3 cut(s) 94, 213, 1394
Bbv12I GWGCWC 2 cut(s) 157, 1755
BbvCI CCTCAGC 1 cut(s) 1164
BbvI GCAGC 1 cut(s) 1933
BccI CCATC 5 cut(s) 97, 274, 1325, 1627, 2108
BceAI ACGGC 4 cut(s) 170, 242, 806, 1191
BcgI CGANNNNNNTGC 2 cut(s) 85, 119
BciT130I CCWGG 6 cut(s) 31, 356, 406, 630, 1069, 1742
BclI TGATCA 2 cut(s) 693, 715
BcoDI GTCTC 2 cut(s) 321, 2031
BfaI CTAG 4 cut(s) 251, 348, 1281, 1764
BfuAI ACCTGC 1 cut(s) 1988
BisI GCNGC 1 cut(s) 1922
BlsI GCNGC 1 cut(s) 1923
Bme1390I CCNGG 6 cut(s) 31, 356, 406, 630, 1069, 1742
Bme18I GGWCC 1 cut(s) 1985
BmeT110I CYCGRG 1 cut(s) 1679
BmgT120I GGNCC 1 cut(s) 1985
BmiI GGNNCC 5 cut(s) 210, 299, 411, 846, 1986
BmrFI CCNGG 6 cut(s) 31, 356, 406, 630, 1069, 1742
BmsI GCATC 5 cut(s) 244, 381, 1350, 2004, 2076
BpiI GAAGAC 3 cut(s) 94, 213, 1394
BpmI CTGGAG 1 cut(s) 1763
Bpu10I CCTNAGC 1 cut(s) 1164
BsaAI YACGTR 3 cut(s) 158, 386, 2127
BsaHI GRCGYC 1 cut(s) 81
BsaI GGTCTC 1 cut(s) 321
BsaJI CCNNGG 9 cut(s) 405, 462, 628, 822, 1008, 1732, 1820, 1905, 2088
BsaWI WCCGGW 3 cut(s) 451, 604, 847
BsaXI ACNNNNNCTCC 4 cut(s) 25, 55, 1008, 1038
Bsc4I CCNNNNNNNGG 1 cut(s) 653
Bse1I ACTGG 2 cut(s) 808, 1290
Bse3DI GCAATG 1 cut(s) 1910
BseAI TCCGGA 2 cut(s) 604, 847
BseBI CCWGG 6 cut(s) 31, 356, 406, 630, 1069, 1742
BseDI CCNNGG 9 cut(s) 405, 462, 628, 822, 1008, 1732, 1820, 1905, 2088
BseGI GGATG 7 cut(s) 786, 979, 1519, 1635, 1753, 1866, 2119
BseLI CCNNNNNNNGG 1 cut(s) 653
BseMI GCAATG 1 cut(s) 1910
BseMII CTCAG 6 cut(s) 654, 1071, 1155, 1228, 1571, 1877
BseNI ACTGG 2 cut(s) 808, 1290
BseRI GAGGAG 2 cut(s) 956, 1248
BseXI GCAGC 1 cut(s) 1933
BsgI GTGCAG 2 cut(s) 385, 1304
Bsh1236I CGCG 2 cut(s) 368, 1822
BshNI GGYRCC 2 cut(s) 208, 409
BsiHKAI GWGCWC 2 cut(s) 157, 1755
BsiHKCI CYCGRG 1 cut(s) 1679
BsiSI CCGG 3 cut(s) 452, 605, 848
BslFI GGGAC 5 cut(s) 228, 867, 1288, 1514, 1998
BslI CCNNNNNNNGG 1 cut(s) 653
BsmAI GTCTC 2 cut(s) 321, 2031
BsmFI GGGAC 5 cut(s) 228, 867, 1288, 1514, 1998
Bso31I GGTCTC 1 cut(s) 321
BsoBI CYCGRG 1 cut(s) 1679
Bsp1286I GDGCHC 2 cut(s) 157, 1755
Bsp13I TCCGGA 2 cut(s) 604, 847
Bsp19I CCATGG 3 cut(s) 1008, 1732, 1905
Bsp68I TCGCGA 1 cut(s) 368
BspACI CCGC 7 cut(s) 487, 546, 1420, 1722, 1820, 1822, 1858
BspCNI CTCAG 6 cut(s) 655, 1072, 1156, 1227, 1570, 1878
BspEI TCCGGA 2 cut(s) 604, 847
BspFNI CGCG 2 cut(s) 368, 1822
BspLI GGNNCC 5 cut(s) 210, 299, 411, 846, 1986
BspMI ACCTGC 1 cut(s) 1988
BspPI GGATC 5 cut(s) 292, 305, 630, 1204, 1833
BspT107I GGYRCC 2 cut(s) 208, 409
BspTNI GGTCTC 1 cut(s) 321
BsrBI CCGCTC 1 cut(s) 487
BsrDI GCAATG 1 cut(s) 1910
BsrI ACTGG 2 cut(s) 808, 1290
BssECI CCNNGG 9 cut(s) 405, 462, 628, 822, 1008, 1732, 1820, 1905, 2088
BssNI GRCGYC 1 cut(s) 81
BssSI CACGAG 2 cut(s) 150, 1322
BssT1I CCWWGG 5 cut(s) 462, 1008, 1732, 1905, 2088
Bst2BI CACGAG 2 cut(s) 150, 1322
Bst2UI CCWGG 6 cut(s) 31, 356, 406, 630, 1069, 1742
Bst4CI ACNGT 2 cut(s) 100, 751
Bst6I CTCTTC 2 cut(s) 1251, 2016
BstACI GRCGYC 1 cut(s) 81
BstBAI YACGTR 3 cut(s) 158, 386, 2127
BstC8I GCNNGC 3 cut(s) 370, 380, 544
BstDEI CTNAG 7 cut(s) 663, 1080, 1164, 1214, 1557, 1886, 1925
BstDSI CCRYGG 5 cut(s) 822, 1008, 1732, 1820, 1905
BstF5I GGATG 7 cut(s) 786, 979, 1519, 1635, 1753, 1866, 2119
BstFNI CGCG 2 cut(s) 368, 1822
BstMAI GTCTC 2 cut(s) 321, 2031
BstMWI GCNNNNNNNGC 6 cut(s) 152, 1175, 1580, 1819, 1921, 2053
BstNI CCWGG 6 cut(s) 31, 356, 406, 630, 1069, 1742
BstNSI RCATGY 2 cut(s) 185, 1674
BstSCI CCNGG 6 cut(s) 29, 354, 404, 628, 1067, 1740
BstUI CGCG 2 cut(s) 368, 1822
BstV1I GCAGC 1 cut(s) 1933
BstV2I GAAGAC 3 cut(s) 94, 213, 1394
BstX2I RGATCY 3 cut(s) 297, 622, 1825
BstXI CCANNNNNNTGG 1 cut(s) 338
BstYI RGATCY 3 cut(s) 297, 622, 1825
BtgI CCRYGG 5 cut(s) 822, 1008, 1732, 1820, 1905
BtsCI GGATG 7 cut(s) 786, 979, 1519, 1635, 1753, 1866, 2119
BtsI GCAGTG 1 cut(s) 1429
BtsIMutI CAGTG 1 cut(s) 1429
BtuMI TCGCGA 1 cut(s) 368
BveI ACCTGC 1 cut(s) 1988
Cac8I GCNNGC 3 cut(s) 370, 380, 544
Cfr13I GGNCC 1 cut(s) 1985
Cfr42I CCGCGG 1 cut(s) 1823
CseI GACGC 2 cut(s) 70, 340
Csp6I GTAC 2 cut(s) 1249, 1816
CviQI GTAC 2 cut(s) 1249, 1816
DdeI CTNAG 7 cut(s) 663, 1080, 1164, 1214, 1557, 1886, 1925
DraIII CACNNNGTG 1 cut(s) 791
Eam1104I CTCTTC 2 cut(s) 1251, 2016
EarI CTCTTC 2 cut(s) 1251, 2016
EciI GGCGGA 2 cut(s) 561, 1737
Eco130I CCWWGG 5 cut(s) 462, 1008, 1732, 1905, 2088
Eco31I GGTCTC 1 cut(s) 321
Eco32I GATATC 1 cut(s) 1524
Eco47I GGWCC 1 cut(s) 1985
Eco57I CTGAAG 4 cut(s) 531, 1332, 1547, 1857
Eco72I CACGTG 1 cut(s) 386
Eco88I CYCGRG 1 cut(s) 1679
EcoRII CCWGG 6 cut(s) 29, 354, 404, 628, 1067, 1740
EcoRV GATATC 1 cut(s) 1524
EcoT14I CCWWGG 5 cut(s) 462, 1008, 1732, 1905, 2088
ErhI CCWWGG 5 cut(s) 462, 1008, 1732, 1905, 2088
FaqI GGGAC 5 cut(s) 228, 867, 1288, 1514, 1998
FauI CCCGC 3 cut(s) 1427, 1815, 1827
FbaI TGATCA 2 cut(s) 693, 715
Fnu4HI GCNGC 1 cut(s) 1922
FokI GGATG 7 cut(s) 793, 966, 1526, 1642, 1760, 1873, 2126
Fsp4HI GCNGC 1 cut(s) 1922
FspBI CTAG 4 cut(s) 251, 348, 1281, 1764
GluI GCNGC 1 cut(s) 1922
GsuI CTGGAG 1 cut(s) 1763
HapII CCGG 3 cut(s) 452, 605, 848
HgaI GACGC 2 cut(s) 70, 340
Hin1I GRCGYC 1 cut(s) 81
HincII GTYRAC 3 cut(s) 262, 838, 886
HindII GTYRAC 3 cut(s) 262, 838, 886
HindIII AAGCTT 3 cut(s) 1703, 1839, 2075
HpaII CCGG 3 cut(s) 452, 605, 848
HphI GGTGA 3 cut(s) 628, 818, 887
Hpy166II GTNNAC 7 cut(s) 262, 389, 796, 838, 886, 1777, 1945
Hpy188III TCNNGA 9 cut(s) 339, 367, 605, 713, 848, 913, 1087, 1357, 1679
Hpy8I GTNNAC 7 cut(s) 262, 389, 796, 838, 886, 1777, 1945
Hpy99I CGWCG 2 cut(s) 323, 1204
HpyAV CCTTC 5 cut(s) 113, 287, 1450, 1870, 1884
HpyCH4III ACNGT 2 cut(s) 100, 751
HpyCH4IV ACGT 5 cut(s) 157, 198, 385, 1393, 2126
HpyF10VI GCNNNNNNNGC 6 cut(s) 152, 1175, 1580, 1819, 1921, 2053
HpyF3I CTNAG 7 cut(s) 663, 1080, 1164, 1214, 1557, 1886, 1925
HpySE526I ACGT 5 cut(s) 157, 198, 385, 1393, 2126
Hsp92I GRCGYC 1 cut(s) 81
Kpn2I TCCGGA 2 cut(s) 604, 847
Ksp22I TGATCA 2 cut(s) 693, 715
KspI CCGCGG 1 cut(s) 1823
LmnI GCTCC 6 cut(s) 273, 309, 454, 850, 1071, 1126
Lsp1109I GCAGC 1 cut(s) 1933
LweI GCATC 5 cut(s) 244, 381, 1350, 2004, 2076
MaeI CTAG 4 cut(s) 251, 348, 1281, 1764
MaeII ACGT 5 cut(s) 157, 198, 385, 1393, 2126
MaeIII GTNAC 6 cut(s) 272, 783, 826, 868, 1687, 1969
MbiI CCGCTC 1 cut(s) 487
MflI RGATCY 3 cut(s) 297, 622, 1825
MhlI GDGCHC 2 cut(s) 157, 1755
MlyI GAGTC 4 cut(s) 808, 1408, 1746, 2033
MmeI TCCRAC 2 cut(s) 304, 994
MroI TCCGGA 2 cut(s) 604, 847
MseI TTAA 9 cut(s) 522, 575, 611, 1299, 1532, 1623, 1979, 2079, 2137
MslI CAYNNNNRTG 4 cut(s) 407, 1269, 1326, 1958
MspA1I CMGCKG 1 cut(s) 1822
MspI CCGG 3 cut(s) 452, 605, 848
MspR9I CCNGG 6 cut(s) 31, 356, 406, 630, 1069, 1742
MvaI CCWGG 6 cut(s) 31, 356, 406, 630, 1069, 1742
MvnI CGCG 2 cut(s) 368, 1822
MwoI GCNNNNNNNGC 6 cut(s) 152, 1175, 1580, 1819, 1921, 2053
NcoI CCATGG 3 cut(s) 1008, 1732, 1905
NlaIV GGNNCC 5 cut(s) 210, 299, 411, 846, 1986
NmuCI GTSAC 1 cut(s) 783
NruI TCGCGA 1 cut(s) 368
NspI RCATGY 2 cut(s) 185, 1674
OliI CACNNNNGTG 2 cut(s) 407, 1326
PaqCI CACCTGC 1 cut(s) 1988
PciI ACATGT 1 cut(s) 1670
PcsI WCGNNNNNNNCGW 1 cut(s) 1472
PfeI GAWTC 7 cut(s) 359, 633, 770, 1208, 1477, 1901, 2084
PfoI TCCNGGA 2 cut(s) 354, 1740
PkrI GCNGC 1 cut(s) 1923
PleI GAGTC 4 cut(s) 808, 1407, 1745, 2032
PmaCI CACGTG 1 cut(s) 386
PmlI CACGTG 1 cut(s) 386
PpsI GAGTC 4 cut(s) 808, 1407, 1745, 2032
Ppu21I YACGTR 3 cut(s) 158, 386, 2127
PscI ACATGT 1 cut(s) 1670
PshBI ATTAAT 1 cut(s) 1979
PsiI TTATAA 1 cut(s) 419
Psp6I CCWGG 6 cut(s) 29, 354, 404, 628, 1067, 1740
PspCI CACGTG 1 cut(s) 386
PspGI CCWGG 6 cut(s) 29, 354, 404, 628, 1067, 1740
PspN4I GGNNCC 5 cut(s) 210, 299, 411, 846, 1986
PspPI GGNCC 1 cut(s) 1985
PsuI RGATCY 3 cut(s) 297, 622, 1825
RruI TCGCGA 1 cut(s) 368
RsaI GTAC 2 cut(s) 1250, 1817
RsaNI GTAC 2 cut(s) 1249, 1816
RseI CAYNNNNRTG 4 cut(s) 407, 1269, 1326, 1958
SacII CCGCGG 1 cut(s) 1823
SaqAI TTAA 9 cut(s) 522, 575, 611, 1299, 1532, 1623, 1979, 2079, 2137
SatI GCNGC 1 cut(s) 1922
Sau96I GGNCC 1 cut(s) 1985
SchI GAGTC 4 cut(s) 808, 1408, 1746, 2033
ScrFI CCNGG 6 cut(s) 31, 356, 406, 630, 1069, 1742
SduI GDGCHC 2 cut(s) 157, 1755
SfaNI GCATC 5 cut(s) 244, 381, 1350, 2004, 2076
Sfr303I CCGCGG 1 cut(s) 1823
SgrBI CCGCGG 1 cut(s) 1823
SinI GGWCC 1 cut(s) 1985
SmiMI CAYNNNNRTG 4 cut(s) 407, 1269, 1326, 1958
SsiI CCGC 7 cut(s) 487, 546, 1420, 1722, 1820, 1822, 1858
SspI AATATT 1 cut(s) 1114
SspMI CTAG 4 cut(s) 251, 348, 1281, 1764
StyD4I CCNGG 6 cut(s) 29, 354, 404, 628, 1067, 1740
StyI CCWWGG 5 cut(s) 462, 1008, 1732, 1905, 2088
TaaI ACNGT 2 cut(s) 100, 751
TaiI ACGT 5 cut(s) 160, 201, 388, 1396, 2129
TaqI TCGA 4 cut(s) 753, 1202, 1466, 1480
TaqII GACCGA 1 cut(s) 2002
TfiI GAWTC 7 cut(s) 359, 633, 770, 1208, 1477, 1901, 2084
Tru1I TTAA 9 cut(s) 522, 575, 611, 1299, 1532, 1623, 1979, 2079, 2137
Tru9I TTAA 9 cut(s) 522, 575, 611, 1299, 1532, 1623, 1979, 2079, 2137
TscAI CASTG 1 cut(s) 1429
TseFI GTSAC 1 cut(s) 783
TseI GCWGC 1 cut(s) 1921
Tsp45I GTSAC 1 cut(s) 783
TspGWI ACGGA 3 cut(s) 230, 260, 2019
TspRI CASTG 1 cut(s) 1429
VpaK11BI GGWCC 1 cut(s) 1985
VspI ATTAAT 1 cut(s) 1979
XapI RAATTY 6 cut(s) 110, 1047, 1221, 1238, 1408, 1461
XceI RCATGY 2 cut(s) 185, 1674
XcmI CCANNNNNNNNNTGG 1 cut(s) 2095
XspI CTAG 4 cut(s) 251, 348, 1281, 1764
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.