Rw1G005990
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
12110088 .. 12118781
8694 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G005990.1

Sequence Viewer

Length: 2085 bp
ATGTGTACTGAATGGTTTCCACTGCTAATCCCTTTTAAAAGAAGGCATGATCATGGCCCTTATTTGGTTTCTTTAATCATTAAGATGGGAGCAGCAAGGCAAACAGATTTAGCATGCATTTCAGAAGGTGAAGGATCATCATGTGTAGAACAATATGCCATCCTTGAAGCAGCACCTATTGTGTCATCCTACAATGACAAAATCCGTCCTCTCCTTGACGCCGTTGACAAGCTCAGGAGCCTCATGGTTATGGAGGAAGGCATTCAGCTCCCCACCATTGTTGTTGTAGGTGACCAATCATCTGGCAAGTCAAGCGTCCTTGAATCCCTGGCCGGCATCAGCCTGCCACGTGGACAAGGTATCTGCACCAGGGTACCCCTTATAATGAGGCTTCAACACCACTCTAGTCCTGAACCAGAGTTCCAGCTGGAGTACAATGGCAAAGTTGAGCACACTGATGAGGTCAACATAGCTGATGATATTATCAATGCCACCAATGCTATTGCTGGGGGAGGTAAGGGAATTTCTAACACCCCATTGACTTTGTTGGTGAAAAAGGATGGTGTTCCGGATTTGACTATGGTAGATCTCCCTGGAATCACTAGAGTTCCTGTTCGTGGTCAGCCTGAGGATATCTATGATCAAATCAAAGACATGATCATGCATTATATCAAGCCTGAAGAGAGCATCATTCTTAATGTGTTGTCTGCTACTGTTGATTTTACAACTTGTGAATCCATCAGGATGTCACAGAGTGTGGATAGAGCTGGTGATAGGACTCTGGCTGTGGTCACAAAGGTTGATCAGGCTCCCGAAGGACTATTAGAGAAGGTTACAGCAGATGATGTTAGTATAGGTCTCGGTTATGTCTGTGTGAGGAACCGGATTGGAGATGAAACTTATGAGGAGGCAAGGGCTAAATCTCAACAACTATTTCAAACCCATCCTTTGTTGTCCAGGATTGACAAATCTATGGTTGGAATTCCAGTTCTGGCTCAAAGGTTGGTGCAGATTCAAGCTTCTAGCATAGCTAGAAACTTGCCAGACATTGTCAAGAAGATAACTGACAAGCTTAGTTCTTGTCTTTCGGAGTTGAACAAAATGCCAAAGAAGCTGTCGAGTGTTGGTGAAGCCATGACCGCGTTTATGCAGATCATCGGATCATCAAAAGAATCGCTTAGGAAAATTCTGGTGAGAGGAGAATTTGATGAATTCCCTGATGACAAGCGCATGCATTGCACTGCTCGGCTTTCTGAGATGCTCACTCAGTACTCAGATCAACTTCACAAGGGTGAAGAAAGTGACCCAAAAAGTAACTTCTTAGTAGAGGAGATCAAGATTTTGGAGGAAGCAAAAGGTATTAATCTTCCGAATTTTGTTCCCCACAATGCTTTTCTTGCTATCTTGCAGGGAAAAGTGAAGGGAATTTCGAGCATGCCTATTGGGTTTGTTGAGAAGGTTTGGAGTTATATTGAAGAAGTGGTTATGTCTGTGTTAATGCATAATACAGAAAACTATTATGAGCTTCAGGTATGCGCCAGAAGAGCTGGCCGTAATCTTATAACAAGGATGAAAGAAAGGTCCATTGAGTGGATGATGGAGATAGTGGAAATGGAGCAGCTGACTGATTATACATGTAATCCAGAATATTCATCCGAATGTAGTAGGCTGATGGGTCAACAAGACTCATTTGTACATGCGGTGTTATCTAAAAATTACTCTACGCTCTCTGTAGAGGGTATTGGGGAAGTTGAAGTTGGAGTCCTTTGGCAGTATAATCATGTTCTGTCTCAGGCTTTCGACTTGAAAATGAGGATGACTGCCTATTGGAAAGTTGTTCTGAGAAGGCTTGTTGATTGTATGGCTTTGCATTTGCAGTTGAGTGTTTCGAAACTAGTGAACAAAGACATGGAGATTGAGATTGTGAAGGAGTTGATGGAACCAAATTGCGGTGGTGGGTTTGAGAAAATGCTGGAGGAATCTCCAGCAGTTTCCCTCAAGCGCGAGAAGCTGGTAAAGAGCATCAAAAAGCTTAGGGATTCCAAAGAGGTTGTTGCTAAGATCTTGGATGGCGTTGCTACCTAA

Protein Analysis

694

Amino Acids

77.55

Weight (kDa)

5.58

Isoelectric Point (pI)

49.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dynamin_N PF00350 93 - 267 1.2e-40 Dynamin family
Dynamin_M PF01031 275 - 555 8.5e-62 Dynamin central region
GED PF02212 598 - 687 3.7e-09 Dynamin GTPase effector domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000365)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G60500 AT1G60530
fragaria_vesca FvH4_4g34670 FvH4_7g03430 FvH4_7g03440 FvH4_7g03780
malus_domestica MD02G1282600.v1.1 MD02G1282700.v1.1 MD02G1282900.v1.1 MD14G1008400.v1.1 MD14G1008800.v1.1 MD14G1008900.v1.1 MD14G1009000.v1.1 MD14G1009200.v1.1 MD14G1009300.v1.1
prunus_persica Prupe.2G039500_v2.0.a1 Prupe.2G039600_v2.0.a1 Prupe.2G039800_v2.0.a1 Prupe.2G039900_v2.0.a1 Prupe.2G040000_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015300_v2.0.a1
pyrus_communis pycom02g24110 pycom02g24120 pycom14g00720 pycom14g00740 pycom14g00780
rosa_chinensis RchiOBHm_Chr1g0325781 RchiOBHm_Chr1g0326171 RchiOBHm_Chr1g0326211 RchiOBHm_Chr1g0327001 RchiOBHm_Chr1g0327051 RchiOBHm_Chr1g0327071 RchiOBHm_Chr1g0327091 RchiOBHm_Chr1g0327111 RchiOBHm_Chr2g0127731 RchiOBHm_Chr2g0127741 RchiOBHm_Chr4g0444021
rosa_laevigata RLG00000005864 RLG00000005866 RLG00000030044 RLG00000030045 RLG00000030047 RLG00000030048 RLG00000030083 RLG00000030106
rosa_multiflora Rmu_sc0000795.1_g000013 Rmu_sc0000795.1_g000046 Rmu_sc0000795.1_g000049 Rmu_sc0004240.1_g000005 Rmu_sc0004240.1_g000006 Rmu_sc0006009.1_g000005 Rmu_sc0015522.1_g000011 Rmu_sc0025852.1_g000001
rosa_roxburghii Rroxscaffold_4G00323340 Rroxscaffold_4G00323420 Rroxscaffold_4G00323950 Rroxscaffold_4G00324390 Rroxscaffold_5G00384590
rosa_rugosa Rorug01G0054400 Rorug01G0057700 Rorug01G0062800 Rorug01G0062900 Rorug01G0063200 Rorug01G0063300 Rorug04G0349000
rosa_samantha Rh1AG069900 Rh1AG070200 Rh1AG070400 Rh1AG070700 Rh1AG071000 Rh1AG074600 Rh1AG079800 Rh1AG080000 Rh1AG080600 Rh1BG057600 Rh1BG060000 Rh1BG064000 Rh1CG070400 Rh1CG073100 Rh1CG077500 Rh1CG077600 Rh1CG078000 Rh1CG078600 Rh1DG075100 Rh1DG079900 Rh1DG084000 Rh1DG084100 Rh1DG084400 Rh1DG084900 Rh1DG085000 Rh2BG332700 Rh4AG409800 Rh4BG420900 Rh4CG435200 Rh4DG416100
rosa_wichuraiana Rw1G005780 Rw1G005990 Rw1G006330 Rw1G006340 Rw1G006380 Rw1G006390 Rw2G026260 Rw4G035200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 383, 1562
Acc65I GGTACC 1 cut(s) 373
AccB1I GGYRCC 1 cut(s) 373
AccB7I CCANNNNNTGG 1 cut(s) 1590
AccII CGCG 2 cut(s) 1142, 2004
AccIII TCCGGA 1 cut(s) 568
AciI CCGC 3 cut(s) 1140, 1700, 1950
AclWI GGATC 2 cut(s) 142, 1168
AcoI YGGCCR 2 cut(s) 330, 1549
AcsI RAATTY 7 cut(s) 522, 981, 1185, 1202, 1211, 1372, 1425
AcuI CTGAAG 2 cut(s) 699, 1511
AcvI CACGTG 1 cut(s) 350
AcyI GRCGYC 1 cut(s) 219
AdeI CACNNNGTG 1 cut(s) 755
AfaI GTAC 5 cut(s) 7, 375, 434, 1271, 1695
AfiI CCNNNNNNNGG 4 cut(s) 64, 617, 1590, 1949
AflIII ACRYGT 1 cut(s) 1634
AgsI TTSAA 9 cut(s) 167, 323, 395, 938, 1016, 1096, 1475, 1754, 1807
AhlI ACTAGT 1 cut(s) 1894
AjnI CCWGG 4 cut(s) 327, 368, 592, 956
AjuI GAANNNNNNNTTGG 2 cut(s) 1740, 1772
AleI CACNNNNGTG 1 cut(s) 1290
AloI GAACNNNNNNTCC 4 cut(s) 405, 437, 972, 1004
Alw21I GWGCWC 1 cut(s) 453
Alw26I GTCTC 2 cut(s) 863, 1794
AlwI GGATC 2 cut(s) 142, 1168
Aor13HI TCCGGA 1 cut(s) 568
AoxI GGCC 3 cut(s) 55, 330, 1549
ApeKI GCWGC 3 cut(s) 92, 170, 1618
ApoI RAATTY 7 cut(s) 522, 981, 1185, 1202, 1211, 1372, 1425
ArsI GACNNNNNNTTYG 2 cut(s) 1100, 1132
AseI ATTAAT 1 cut(s) 1362
Asp700I GAANNNNTTC 2 cut(s) 15, 261
Asp718I GGTACC 1 cut(s) 373
AspLEI GCGC 3 cut(s) 1230, 1538, 2004
AspS9I GGNCC 2 cut(s) 56, 1581
AsuHPI GGTGA 7 cut(s) 140, 302, 562, 782, 1139, 1204, 1304
AsuII TTCGAA 1 cut(s) 1889
AvaII GGWCC 1 cut(s) 1581
AxyI CCTNAGG 1 cut(s) 627
BaeI ACNNNNGTAYC 2 cut(s) 357, 390
BanI GGYRCC 1 cut(s) 373
BbrPI CACGTG 1 cut(s) 350
Bbv12I GWGCWC 1 cut(s) 453
BbvI GCAGC 3 cut(s) 104, 182, 1630
BccI CCATC 9 cut(s) 79, 167, 554, 746, 951, 1591, 1666, 1930, 2063
BceAI ACGGC 2 cut(s) 206, 1536
BciT130I CCWGG 4 cut(s) 329, 370, 594, 958
BclI TGATCA 4 cut(s) 49, 640, 657, 802
BcoDI GTCTC 2 cut(s) 863, 1794
BcuI ACTAGT 1 cut(s) 1894
BfaI CTAG 5 cut(s) 405, 603, 1023, 1032, 1895
BfmI CTRYAG 1 cut(s) 1731
BglII AGATCT 2 cut(s) 586, 2061
BisI GCNGC 3 cut(s) 93, 171, 1619
BlsI GCNGC 3 cut(s) 94, 172, 1620
BmcAI AGTACT 1 cut(s) 1271
Bme1390I CCNGG 4 cut(s) 329, 370, 594, 958
Bme18I GGWCC 1 cut(s) 1581
BmgT120I GGNCC 2 cut(s) 56, 1581
BmiI GGNNCC 5 cut(s) 239, 375, 810, 881, 1941
BmrFI CCNGG 4 cut(s) 329, 370, 594, 958
BmsI GCATC 4 cut(s) 345, 696, 1248, 2031
BpmI CTGGAG 3 cut(s) 449, 1968, 1994
Bpu10I CCTNAGC 3 cut(s) 233, 1178, 2033
Bpu14I TTCGAA 1 cut(s) 1889
BpuEI CTTGAG 1 cut(s) 1982
BsaAI YACGTR 1 cut(s) 350
BsaHI GRCGYC 1 cut(s) 219
BsaI GGTCTC 1 cut(s) 863
BsaJI CCNNGG 3 cut(s) 327, 369, 592
BsaWI WCCGGW 2 cut(s) 568, 882
Bsc4I CCNNNNNNNGG 4 cut(s) 64, 617, 1590, 1949
Bse118I RCCGGY 1 cut(s) 332
Bse1I ACTGG 1 cut(s) 986
Bse21I CCTNAGG 1 cut(s) 627
Bse3DI GCAATG 1 cut(s) 1234
BseAI TCCGGA 1 cut(s) 568
BseBI CCWGG 4 cut(s) 329, 370, 594, 958
BseDI CCNNGG 3 cut(s) 327, 369, 592
BseLI CCNNNNNNNGG 4 cut(s) 64, 617, 1590, 1949
BseMI GCAATG 1 cut(s) 1234
BseMII CTCAG 7 cut(s) 247, 618, 1245, 1280, 1287, 1805, 1832
BseNI ACTGG 1 cut(s) 986
BseRI GAGGAG 3 cut(s) 920, 1212, 1343
BseXI GCAGC 3 cut(s) 104, 182, 1630
BseYI CCCAGC 1 cut(s) 506
BsgI GTGCAG 2 cut(s) 349, 1028
Bsh1236I CGCG 2 cut(s) 1142, 2004
BshFI GGCC 3 cut(s) 57, 332, 1551
BshNI GGYRCC 1 cut(s) 373
BsiHKAI GWGCWC 1 cut(s) 453
BsiSI CCGG 3 cut(s) 333, 569, 883
BslI CCNNNNNNNGG 4 cut(s) 64, 617, 1590, 1949
BsmAI GTCTC 2 cut(s) 863, 1794
BsmI GAATGC 1 cut(s) 261
BsnI GGCC 3 cut(s) 57, 332, 1551
Bso31I GGTCTC 1 cut(s) 863
Bsp119I TTCGAA 1 cut(s) 1889
Bsp1286I GDGCHC 1 cut(s) 453
Bsp13I TCCGGA 1 cut(s) 568
Bsp1407I TGTACA 1 cut(s) 1693
BspACI CCGC 3 cut(s) 1140, 1700, 1950
BspANI GGCC 3 cut(s) 57, 332, 1551
BspCNI CTCAG 7 cut(s) 246, 619, 1246, 1279, 1286, 1804, 1833
BspEI TCCGGA 1 cut(s) 568
BspFNI CGCG 2 cut(s) 1142, 2004
BspLI GGNNCC 5 cut(s) 239, 375, 810, 881, 1941
BspPI GGATC 2 cut(s) 142, 1168
BspQI GCTCTTC 1 cut(s) 1537
BspT104I TTCGAA 1 cut(s) 1889
BspT107I GGYRCC 1 cut(s) 373
BspTNI GGTCTC 1 cut(s) 863
BsrDI GCAATG 1 cut(s) 1234
BsrFI RCCGGY 1 cut(s) 332
BsrGI TGTACA 1 cut(s) 1693
BsrI ACTGG 1 cut(s) 986
BssAI RCCGGY 1 cut(s) 332
BssECI CCNNGG 3 cut(s) 327, 369, 592
BssNI GRCGYC 1 cut(s) 219
Bst2UI CCWGG 4 cut(s) 329, 370, 594, 958
Bst4CI ACNGT 1 cut(s) 715
Bst6I CTCTTC 2 cut(s) 675, 1537
BstACI GRCGYC 1 cut(s) 219
BstAPI GCANNNNNTGC 1 cut(s) 1236
BstAUI TGTACA 1 cut(s) 1693
BstBAI YACGTR 1 cut(s) 350
BstBI TTCGAA 1 cut(s) 1889
BstC8I GCNNGC 6 cut(s) 115, 334, 344, 1232, 1436, 1549
BstEII GGTNACC 1 cut(s) 290
BstFNI CGCG 2 cut(s) 1142, 2004
BstHHI GCGC 3 cut(s) 1230, 1538, 2004
BstMAI GTCTC 2 cut(s) 863, 1794
BstMWI GCNNNNNNNGC 8 cut(s) 312, 497, 1111, 1139, 1236, 1397, 1544, 2008
BstNI CCWGG 4 cut(s) 329, 370, 594, 958
BstNSI RCATGY 5 cut(s) 117, 1234, 1438, 1638, 1700
BstPI GGTNACC 1 cut(s) 290
BstSCI CCNGG 4 cut(s) 327, 368, 592, 956
BstSFI CTRYAG 1 cut(s) 1731
BstUI CGCG 2 cut(s) 1142, 2004
BstV1I GCAGC 3 cut(s) 104, 182, 1630
BstX2I RGATCY 2 cut(s) 586, 2061
BstXI CCANNNNNNTGG 1 cut(s) 302
BstYI RGATCY 2 cut(s) 586, 2061
Bsu36I CCTNAGG 1 cut(s) 627
BsuRI GGCC 3 cut(s) 57, 332, 1551
BtsI GCAGTG 2 cut(s) 20, 1239
BtsIMutI CAGTG 3 cut(s) 20, 453, 1239
Cac8I GCNNGC 6 cut(s) 115, 334, 344, 1232, 1436, 1549
CfoI GCGC 3 cut(s) 1230, 1538, 2004
Cfr10I RCCGGY 1 cut(s) 332
Cfr13I GGNCC 2 cut(s) 56, 1581
CseI GACGC 2 cut(s) 227, 304
Csp6I GTAC 5 cut(s) 6, 374, 433, 1270, 1694
CspCI CAANNNNNGTGG 2 cut(s) 262, 297
CviQI GTAC 5 cut(s) 6, 374, 433, 1270, 1694
DraI TTTAAA 1 cut(s) 37
DraIII CACNNNGTG 1 cut(s) 755
EaeI YGGCCR 2 cut(s) 330, 1549
Eam1104I CTCTTC 2 cut(s) 675, 1537
EarI CTCTTC 2 cut(s) 675, 1537
Eco31I GGTCTC 1 cut(s) 863
Eco32I GATATC 1 cut(s) 634
Eco47I GGWCC 1 cut(s) 1581
Eco57I CTGAAG 2 cut(s) 699, 1511
Eco72I CACGTG 1 cut(s) 350
Eco81I CCTNAGG 1 cut(s) 627
Eco91I GGTNACC 1 cut(s) 290
EcoO65I GGTNACC 1 cut(s) 290
EcoRI GAATTC 2 cut(s) 981, 1211
EcoRII CCWGG 4 cut(s) 327, 368, 592, 956
EcoRV GATATC 1 cut(s) 634
EcoT22I ATGCAT 4 cut(s) 119, 666, 1236, 1503
FalI AAGNNNNNCTT 2 cut(s) 1161, 1193
FbaI TGATCA 4 cut(s) 49, 640, 657, 802
Fnu4HI GCNGC 3 cut(s) 93, 171, 1619
Fsp4HI GCNGC 3 cut(s) 93, 171, 1619
FspBI CTAG 5 cut(s) 405, 603, 1023, 1032, 1895
GlaI GCGC 3 cut(s) 1229, 1537, 2003
GluI GCNGC 3 cut(s) 93, 171, 1619
GsaI CCCAGC 1 cut(s) 510
GsuI CTGGAG 3 cut(s) 449, 1968, 1994
HaeIII GGCC 3 cut(s) 57, 332, 1551
HapII CCGG 3 cut(s) 333, 569, 883
HgaI GACGC 2 cut(s) 227, 304
HhaI GCGC 3 cut(s) 1230, 1538, 2004
Hin1I GRCGYC 1 cut(s) 219
Hin6I GCGC 3 cut(s) 1228, 1536, 2002
HinP1I GCGC 3 cut(s) 1228, 1536, 2002
HincII GTYRAC 3 cut(s) 226, 466, 1679
HindII GTYRAC 3 cut(s) 226, 466, 1679
HindIII AAGCTT 3 cut(s) 1017, 1070, 2030
HpaII CCGG 3 cut(s) 333, 569, 883
HphI GGTGA 7 cut(s) 140, 302, 562, 782, 1139, 1204, 1304
Hpy166II GTNNAC 6 cut(s) 6, 226, 353, 466, 1679, 1900
Hpy188I TCNGA 8 cut(s) 124, 1090, 1160, 1255, 1276, 1371, 1657, 1842
Hpy188III TCNNGA 8 cut(s) 235, 410, 569, 742, 812, 1054, 1336, 1643
Hpy8I GTNNAC 6 cut(s) 6, 226, 353, 466, 1679, 1900
HpyCH4III ACNGT 1 cut(s) 715
HpyCH4IV ACGT 1 cut(s) 349
HpyF10VI GCNNNNNNNGC 8 cut(s) 312, 497, 1111, 1139, 1236, 1397, 1544, 2008
HpySE526I ACGT 1 cut(s) 349
Hsp92I GRCGYC 1 cut(s) 219
HspAI GCGC 3 cut(s) 1228, 1536, 2002
Kpn2I TCCGGA 1 cut(s) 568
KpnI GGTACC 1 cut(s) 377
KroI GCCGGC 1 cut(s) 332
KroNI GCCGGC 1 cut(s) 334
Ksp22I TGATCA 4 cut(s) 49, 640, 657, 802
LguI GCTCTTC 1 cut(s) 1537
LmnI GCTCC 5 cut(s) 89, 237, 273, 814, 1615
Lsp1109I GCAGC 3 cut(s) 104, 182, 1630
LweI GCATC 4 cut(s) 345, 696, 1248, 2031
MaeI CTAG 5 cut(s) 405, 603, 1023, 1032, 1895
MaeII ACGT 1 cut(s) 349
MaeIII GTNAC 6 cut(s) 290, 747, 790, 832, 1301, 1313
MboII GAAGA 6 cut(s) 692, 1069, 1307, 1358, 1487, 1554
MflI RGATCY 2 cut(s) 586, 2061
MhlI GDGCHC 1 cut(s) 453
MluCI AATT 9 cut(s) 522, 981, 1185, 1202, 1211, 1372, 1425, 1714, 1945
MlyI GAGTC 3 cut(s) 772, 1679, 1770
MmeI TCCRAC 2 cut(s) 958, 1738
Mph1103I ATGCAT 4 cut(s) 119, 666, 1236, 1503
MroI TCCGGA 1 cut(s) 568
MroNI GCCGGC 1 cut(s) 332
MroXI GAANNNNTTC 2 cut(s) 15, 261
MseI TTAA 6 cut(s) 36, 74, 81, 696, 1362, 1496
MslI CAYNNNNRTG 8 cut(s) 51, 83, 248, 456, 659, 743, 1290, 1657
MspA1I CMGCKG 2 cut(s) 427, 1621
MspI CCGG 3 cut(s) 333, 569, 883
MspR9I CCNGG 4 cut(s) 329, 370, 594, 958
Mva1269I GAATGC 1 cut(s) 261
MvaI CCWGG 4 cut(s) 329, 370, 594, 958
MvnI CGCG 2 cut(s) 1142, 2004
MwoI GCNNNNNNNGC 8 cut(s) 312, 497, 1111, 1139, 1236, 1397, 1544, 2008
NaeI GCCGGC 1 cut(s) 334
NgoMIV GCCGGC 1 cut(s) 332
NlaIV GGNNCC 5 cut(s) 239, 375, 810, 881, 1941
NmeAIII GCCGAG 1 cut(s) 1225
NmuCI GTSAC 4 cut(s) 290, 747, 790, 1301
NsiI ATGCAT 4 cut(s) 119, 666, 1236, 1503
NspI RCATGY 5 cut(s) 117, 1234, 1438, 1638, 1700
NspV TTCGAA 1 cut(s) 1889
OliI CACNNNNGTG 1 cut(s) 1290
PaeI GCATGC 3 cut(s) 117, 1234, 1438
PciI ACATGT 1 cut(s) 1634
PciSI GCTCTTC 1 cut(s) 1537
PctI GAATGC 1 cut(s) 261
PdiI GCCGGC 1 cut(s) 334
PdmI GAANNNNTTC 2 cut(s) 15, 261
PfeI GAWTC 7 cut(s) 323, 597, 734, 1012, 1172, 1979, 2039
PflFI GACNNNGTC 1 cut(s) 1049
PflMI CCANNNNNTGG 1 cut(s) 1590
PfoI TCCNGGA 1 cut(s) 956
PkrI GCNGC 3 cut(s) 94, 172, 1620
PleI GAGTC 3 cut(s) 772, 1679, 1769
PmaCI CACGTG 1 cut(s) 350
PmlI CACGTG 1 cut(s) 350
PpsI GAGTC 3 cut(s) 772, 1679, 1769
Ppu21I YACGTR 1 cut(s) 350
PscI ACATGT 1 cut(s) 1634
PshBI ATTAAT 1 cut(s) 1362
PsiI TTATAA 2 cut(s) 383, 1562
Psp6I CCWGG 4 cut(s) 327, 368, 592, 956
PspCI CACGTG 1 cut(s) 350
PspEI GGTNACC 1 cut(s) 290
PspFI CCCAGC 1 cut(s) 506
PspGI CCWGG 4 cut(s) 327, 368, 592, 956
PspN4I GGNNCC 5 cut(s) 239, 375, 810, 881, 1941
PspPI GGNCC 2 cut(s) 56, 1581
PsuI RGATCY 2 cut(s) 586, 2061
PsyI GACNNNGTC 1 cut(s) 1049
PvuII CAGCTG 2 cut(s) 427, 1621
RsaI GTAC 5 cut(s) 7, 375, 434, 1271, 1695
RsaNI GTAC 5 cut(s) 6, 374, 433, 1270, 1694
RseI CAYNNNNRTG 8 cut(s) 51, 83, 248, 456, 659, 743, 1290, 1657
SapI GCTCTTC 1 cut(s) 1537
SaqAI TTAA 6 cut(s) 36, 74, 81, 696, 1362, 1496
SatI GCNGC 3 cut(s) 93, 171, 1619
Sau96I GGNCC 2 cut(s) 56, 1581
ScaI AGTACT 1 cut(s) 1271
SchI GAGTC 3 cut(s) 772, 1679, 1770
ScrFI CCNGG 4 cut(s) 329, 370, 594, 958
SduI GDGCHC 1 cut(s) 453
SfaNI GCATC 4 cut(s) 345, 696, 1248, 2031
SfcI CTRYAG 1 cut(s) 1731
SfuI TTCGAA 1 cut(s) 1889
SinI GGWCC 1 cut(s) 1581
SmiMI CAYNNNNRTG 8 cut(s) 51, 83, 248, 456, 659, 743, 1290, 1657
SmlI CTYRAG 1 cut(s) 1997
SmoI CTYRAG 1 cut(s) 1997
SpeI ACTAGT 1 cut(s) 1894
SphI GCATGC 3 cut(s) 117, 1234, 1438
Sse9I AATT 9 cut(s) 522, 981, 1185, 1202, 1211, 1372, 1425, 1714, 1945
SsiI CCGC 3 cut(s) 1140, 1700, 1950
SspI AATATT 1 cut(s) 1649
SspMI CTAG 5 cut(s) 405, 603, 1023, 1032, 1895
StyD4I CCNGG 4 cut(s) 327, 368, 592, 956
TaaI ACNGT 1 cut(s) 715
TaiI ACGT 1 cut(s) 352
TaqI TCGA 4 cut(s) 1118, 1430, 1800, 1889
TasI AATT 9 cut(s) 522, 981, 1185, 1202, 1211, 1372, 1425, 1714, 1945
TatI WGTACW 4 cut(s) 5, 432, 1269, 1693
TfiI GAWTC 7 cut(s) 323, 597, 734, 1012, 1172, 1979, 2039
Tru1I TTAA 6 cut(s) 36, 74, 81, 696, 1362, 1496
Tru9I TTAA 6 cut(s) 36, 74, 81, 696, 1362, 1496
TscAI CASTG 3 cut(s) 27, 460, 1246
TseFI GTSAC 4 cut(s) 290, 747, 790, 1301
TseI GCWGC 3 cut(s) 92, 170, 1618
Tsp45I GTSAC 4 cut(s) 290, 747, 790, 1301
TspDTI ATGAA 4 cut(s) 909, 1224, 1586, 1641
TspGWI ACGGA 1 cut(s) 194
TspRI CASTG 3 cut(s) 27, 460, 1246
Tth111I GACNNNGTC 1 cut(s) 1049
Van91I CCANNNNNTGG 1 cut(s) 1590
VpaK11BI GGWCC 1 cut(s) 1581
VspI ATTAAT 1 cut(s) 1362
XapI RAATTY 7 cut(s) 522, 981, 1185, 1202, 1211, 1372, 1425
XceI RCATGY 5 cut(s) 117, 1234, 1438, 1638, 1700
XmnI GAANNNNTTC 2 cut(s) 15, 261
XspI CTAG 5 cut(s) 405, 603, 1023, 1032, 1895
ZrmI AGTACT 1 cut(s) 1271
Zsp2I ATGCAT 4 cut(s) 119, 666, 1236, 1503
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.