RchiOBHm_Chr1g0327071
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
15671569 .. 15673602
2034 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55663

Sequence Viewer

Length: 2034 bp
ATGGCTTTTCCATTACTCCGCCTCCATCTCTTCCTCCATCTCACTCTTCTAGTCTTCTTTCAGTCAATATATAAGATTATCAAGAAGATGGGAGCAGCAAAGCAAACAGATTTAGCATGCATTTCAGAAGGTGAAGGATCATCATGTGTCGAACAACATGCCATCATTGAAGCAGCACCGATTGTGTCATCCTACAATGAAAAAATCCGTCCTCTCCTTGACGCCATTGACAAGCTCAGGAGCCTCATGGTTATGGAGGAAGGCATTCAGCTCCCCACCATTGTTGTTGTAGGTGACCAATCATCTGGCAAGTCCAGCGTCCTTGAATCCCTGGCCAGCATCAGCCTGCCACGTGGACAAGGTATCTGCACTAGGGTACCCCTTATAATGAGGCTTCAACACCACTCTAGTCCTGAACCAAAGTTCCTGTTGGAGTACAACGGCAAAGTTGAGCACACTGATGAGGTCAACATTACTGATGATATTGTGAATGCCACCAATGCTATTGTTGGTGGAGGTAAGGGGATTTCTAACACCCCATTGACTTTGTTAGTGAAGAAGAATGGTGTTCCGGATTTGACTATGGTTGATCTCCCTGGAATCACTAGAGTTCCTATTCGTGGTCAGCCTGAGGATATCTATGATCAAATCAAAGATATGATCATGCTGTATATCAAGCCTGAAGAGAGCATCATTCTCAATGTGTTGTCTGCTACTGTTGATTTTACAACTTGTGAATCCATCAGGATGTCACAGAGTGTGGATAGAGCTGGTGATAGAACTCTGGCTGTGGTCACAAAGGTTGATAAGGCTCCCGAAGGACTATTAGAGAAGGTTACAGCAGATGATGTTAGTATTGGTCTTGGTTATGTCTGTGTGAGGAACCGGATTGGAGATGAAACTTATGAGGAGGCCAGGGCTATATCTCAACATCTTTTTCAAACTCATCCTTTGTTGTCCAAGATTGACAAATCTATGGTTGGAATTCCAGTTCTGGCTCAAAAGTTGGTGCAGATTCAAGCTTCTAGCATAGCTAGAAACTTGCAATTGCCAGACATTGTCAAGAAGATAAATGACAAGCTGAATTCTTGTCTTTTTGAGTTGAACAAGATGCCAAAGAGTCTGTCACCTGTTGCTGAAGCCATGACTGCGTTTATGCAGATCATCAGATCATCAAAAGAATCGCTTAGGAAAATTCTGGTGAGAGGAGAATTTGATGAATTCCCTGATGACGAGCACATGCATTGCACTGCTCGGCTTTATGAGATGCTCAATCAGTACTCAGATCAACTTCACAACTGTGAAGAAAGTGACACGAAAAGTAACTTCTTAGTAGAGGAGATCAAGCTTTTGGAGGAAGCAAAAGGTATTAGTCTTCCAAGTGTTGCTCCCCGCAATGCTTTTCTTGTTATCTTGCAGGGAAAAGTGAAGGGAATCTCGAGCATACCTATTGGGTTTGTTGAGAAGGTTTGGAGTTATATTGAAGAAGTGGTTATGTCTGTGTTAATGCATAATACAGAAAACTATTATCAGCTTCAGGTATGCACCAGAAGAGCTGGCCATAATCTTATATCGAGGATGAAAGAAAGGTCAGTTGAGTGGATGATGGAGATAATGGAAATAGAGAAGCTCACTGATTATACATGTAATCCAGAATATGTATCTGAATGGAGTAAGCTGATGGGTCAACAAGACGCATTTATACATTTGATGTTAACTGAAAATCACTCTACGATCCATGTAGAGGGTATTGGGGAAGTTGAACTTGGAGTCCTTCGGCAGTATCCTCCTCCTCATGTTCTCTCTCAGGCTTTTGACTTGAAAATGAGGATGACTGCGTATTGGAAAGTTGTTCTGAGAAGGCTTGTTGATTGTATGGCTTTGCATTTGCAGTTGAGTGTTTCGAAACTTGTGAACCAAGACATGGAGATTGAGATTGTGAATGAGTTGATGGGACCAAATTGTGGTGGTGGGATTGAAAAAAATGCTGGAGGAATCTCCAGCAGTTTCCATCAAGCGCGAGAAGCTGATTAA

Protein Analysis

677

Amino Acids

75.73

Weight (kDa)

5.6

Isoelectric Point (pI)

45.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dynamin_N PF00350 94 - 268 9.4e-38 Dynamin family
Dynamin_M PF01031 276 - 560 1e-57 Dynamin central region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000365)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G60500 AT1G60530
fragaria_vesca FvH4_4g34670 FvH4_7g03430 FvH4_7g03440 FvH4_7g03780
malus_domestica MD02G1282600.v1.1 MD02G1282700.v1.1 MD02G1282900.v1.1 MD14G1008400.v1.1 MD14G1008800.v1.1 MD14G1008900.v1.1 MD14G1009000.v1.1 MD14G1009200.v1.1 MD14G1009300.v1.1
prunus_persica Prupe.2G039500_v2.0.a1 Prupe.2G039600_v2.0.a1 Prupe.2G039800_v2.0.a1 Prupe.2G039900_v2.0.a1 Prupe.2G040000_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015300_v2.0.a1
pyrus_communis pycom02g24110 pycom02g24120 pycom14g00720 pycom14g00740 pycom14g00780
rosa_chinensis RchiOBHm_Chr1g0325781 RchiOBHm_Chr1g0326171 RchiOBHm_Chr1g0326211 RchiOBHm_Chr1g0327001 RchiOBHm_Chr1g0327051 RchiOBHm_Chr1g0327071 RchiOBHm_Chr1g0327091 RchiOBHm_Chr1g0327111 RchiOBHm_Chr2g0127731 RchiOBHm_Chr2g0127741 RchiOBHm_Chr4g0444021
rosa_laevigata RLG00000005864 RLG00000005866 RLG00000030044 RLG00000030045 RLG00000030047 RLG00000030048 RLG00000030083 RLG00000030106
rosa_multiflora Rmu_sc0000795.1_g000013 Rmu_sc0000795.1_g000046 Rmu_sc0000795.1_g000049 Rmu_sc0004240.1_g000005 Rmu_sc0004240.1_g000006 Rmu_sc0006009.1_g000005 Rmu_sc0015522.1_g000011 Rmu_sc0025852.1_g000001
rosa_roxburghii Rroxscaffold_4G00323340 Rroxscaffold_4G00323420 Rroxscaffold_4G00323950 Rroxscaffold_4G00324390 Rroxscaffold_5G00384590
rosa_rugosa Rorug01G0054400 Rorug01G0057700 Rorug01G0062800 Rorug01G0062900 Rorug01G0063200 Rorug01G0063300 Rorug04G0349000
rosa_samantha Rh1AG069900 Rh1AG070200 Rh1AG070400 Rh1AG070700 Rh1AG071000 Rh1AG074600 Rh1AG079800 Rh1AG080000 Rh1AG080600 Rh1BG057600 Rh1BG060000 Rh1BG064000 Rh1CG070400 Rh1CG073100 Rh1CG077500 Rh1CG077600 Rh1CG078000 Rh1CG078600 Rh1DG075100 Rh1DG079900 Rh1DG084000 Rh1DG084100 Rh1DG084400 Rh1DG084900 Rh1DG085000 Rh2BG332700 Rh4AG409800 Rh4BG420900 Rh4CG435200 Rh4DG416100
rosa_wichuraiana Rw1G005780 Rw1G005990 Rw1G006330 Rw1G006340 Rw1G006380 Rw1G006390 Rw2G026260 Rw4G035200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 386
Acc65I GGTACC 1 cut(s) 376
AccB1I GGYRCC 1 cut(s) 376
AccB7I CCANNNNNTGG 2 cut(s) 1924, 1964
AccII CGCG 1 cut(s) 2020
AccIII TCCGGA 1 cut(s) 571
AciI CCGC 2 cut(s) 19, 1393
AclWI GGATC 2 cut(s) 145, 1729
AcoI YGGCCR 2 cut(s) 333, 1558
AcsI RAATTY 5 cut(s) 984, 1084, 1194, 1211, 1220
AcuI CTGAAG 3 cut(s) 702, 1158, 1520
AcvI CACGTG 1 cut(s) 353
AcyI GRCGYC 1 cut(s) 222
AdeI CACNNNGTG 1 cut(s) 758
AfaI GTAC 3 cut(s) 378, 437, 1280
AfiI CCNNNNNNNGG 4 cut(s) 620, 1744, 1924, 1964
AflIII ACRYGT 1 cut(s) 1643
AjnI CCWGG 3 cut(s) 330, 595, 914
AjuI GAANNNNNNNTTGG 2 cut(s) 1749, 1781
AleI CACNNNNGTG 1 cut(s) 1299
AloI GAACNNNNNNTCC 6 cut(s) 408, 440, 975, 1007, 1755, 1787
Alw21I GWGCWC 2 cut(s) 456, 1239
AlwI GGATC 2 cut(s) 145, 1729
Ama87I CYCGRG 1 cut(s) 1438
Aor13HI TCCGGA 1 cut(s) 571
AoxI GGCC 3 cut(s) 333, 912, 1558
ApeKI GCWGC 2 cut(s) 95, 173
ApoI RAATTY 5 cut(s) 984, 1084, 1194, 1211, 1220
ArsI GACNNNNNNTTYG 2 cut(s) 1109, 1141
Asp700I GAANNNNTTC 1 cut(s) 264
Asp718I GGTACC 1 cut(s) 376
AspLEI GCGC 1 cut(s) 2020
AspS9I GGNCC 1 cut(s) 1955
AsuHPI GGTGA 5 cut(s) 143, 305, 785, 1119, 1213
AsuII TTCGAA 1 cut(s) 1904
AvaI CYCGRG 1 cut(s) 1438
AvaII GGWCC 1 cut(s) 1955
AxyI CCTNAGG 1 cut(s) 630
BaeI ACNNNNGTAYC 2 cut(s) 360, 393
BalI TGGCCA 2 cut(s) 335, 1560
BanI GGYRCC 1 cut(s) 376
BbrPI CACGTG 1 cut(s) 353
BbsI GAAGAC 2 cut(s) 46, 1367
Bbv12I GWGCWC 2 cut(s) 456, 1239
BbvI GCAGC 2 cut(s) 107, 185
BccI CCATC 9 cut(s) 33, 45, 82, 170, 749, 1600, 1675, 1945, 2019
BceAI ACGGC 1 cut(s) 457
BcgI CGANNNNNNTGC 2 cut(s) 140, 174
BciT130I CCWGG 3 cut(s) 332, 597, 916
BciVI GTATCC 1 cut(s) 1794
BclI TGATCA 2 cut(s) 643, 660
BfaI CTAG 6 cut(s) 50, 372, 408, 606, 1026, 1035
BfuI GTATCC 1 cut(s) 1794
BisI GCNGC 2 cut(s) 96, 174
BlsI GCNGC 2 cut(s) 97, 175
BmcAI AGTACT 1 cut(s) 1280
Bme1390I CCNGG 3 cut(s) 332, 597, 916
Bme18I GGWCC 1 cut(s) 1955
BmeT110I CYCGRG 1 cut(s) 1438
BmgT120I GGNCC 1 cut(s) 1955
BmiI GGNNCC 5 cut(s) 242, 378, 813, 884, 1956
BmrFI CCNGG 3 cut(s) 332, 597, 916
BmsI GCATC 4 cut(s) 348, 699, 1101, 1257
BpiI GAAGAC 2 cut(s) 46, 1367
BpmI CTGGAG 2 cut(s) 1984, 2010
Bpu10I CCTNAGC 2 cut(s) 236, 1187
Bpu14I TTCGAA 1 cut(s) 1904
BsaAI YACGTR 1 cut(s) 353
BsaHI GRCGYC 1 cut(s) 222
BsaJI CCNNGG 3 cut(s) 330, 595, 915
BsaWI WCCGGW 2 cut(s) 571, 885
BsaXI ACNNNNNCTCC 2 cut(s) 6, 36
Bsc4I CCNNNNNNNGG 4 cut(s) 620, 1744, 1924, 1964
Bse1I ACTGG 1 cut(s) 989
Bse21I CCTNAGG 1 cut(s) 630
Bse3DI GCAATG 2 cut(s) 1243, 1402
BseAI TCCGGA 1 cut(s) 571
BseBI CCWGG 3 cut(s) 332, 597, 916
BseDI CCNNGG 3 cut(s) 330, 595, 915
BseGI GGATG 6 cut(s) 188, 753, 946, 1584, 1608, 1836
BseLI CCNNNNNNNGG 4 cut(s) 620, 1744, 1924, 1964
BseMI GCAATG 2 cut(s) 1243, 1402
BseMII CTCAG 5 cut(s) 250, 621, 1296, 1820, 1847
BseNI ACTGG 1 cut(s) 989
BseRI GAGGAG 5 cut(s) 923, 1221, 1352, 1779, 1782
BseXI GCAGC 2 cut(s) 107, 185
BsgI GTGCAG 2 cut(s) 352, 1031
Bsh1236I CGCG 1 cut(s) 2020
BshFI GGCC 3 cut(s) 335, 914, 1560
BshNI GGYRCC 1 cut(s) 376
BsiHKAI GWGCWC 2 cut(s) 456, 1239
BsiHKCI CYCGRG 1 cut(s) 1438
BsiSI CCGG 2 cut(s) 572, 886
BslFI GGGAC 1 cut(s) 1968
BslI CCNNNNNNNGG 4 cut(s) 620, 1744, 1924, 1964
BsmFI GGGAC 1 cut(s) 1968
BsmI GAATGC 2 cut(s) 264, 496
BsnI GGCC 3 cut(s) 335, 914, 1560
BsoBI CYCGRG 1 cut(s) 1438
Bsp119I TTCGAA 1 cut(s) 1904
Bsp1286I GDGCHC 2 cut(s) 456, 1239
Bsp13I TCCGGA 1 cut(s) 571
Bsp143I GATC 9 cut(s) 137, 589, 643, 660, 1161, 1169, 1285, 1341, 1734
BspACI CCGC 2 cut(s) 19, 1393
BspANI GGCC 3 cut(s) 335, 914, 1560
BspCNI CTCAG 5 cut(s) 249, 622, 1295, 1819, 1848
BspEI TCCGGA 1 cut(s) 571
BspFNI CGCG 1 cut(s) 2020
BspLI GGNNCC 5 cut(s) 242, 378, 813, 884, 1956
BspPI GGATC 2 cut(s) 145, 1729
BspQI GCTCTTC 1 cut(s) 1546
BspT104I TTCGAA 1 cut(s) 1904
BspT107I GGYRCC 1 cut(s) 376
BsrDI GCAATG 2 cut(s) 1243, 1402
BsrI ACTGG 1 cut(s) 989
BssECI CCNNGG 3 cut(s) 330, 595, 915
BssMI GATC 9 cut(s) 137, 589, 643, 660, 1161, 1169, 1285, 1341, 1734
BssNI GRCGYC 1 cut(s) 222
Bst2UI CCWGG 3 cut(s) 332, 597, 916
Bst4CI ACNGT 2 cut(s) 718, 1301
Bst6I CTCTTC 4 cut(s) 35, 51, 678, 1546
BstACI GRCGYC 1 cut(s) 222
BstBAI YACGTR 1 cut(s) 353
BstBI TTCGAA 1 cut(s) 1904
BstC8I GCNNGC 4 cut(s) 118, 337, 347, 1558
BstDEI CTNAG 7 cut(s) 236, 630, 1187, 1282, 1330, 1806, 1856
BstEII GGTNACC 1 cut(s) 293
BstF5I GGATG 6 cut(s) 188, 753, 946, 1584, 1608, 1836
BstFNI CGCG 1 cut(s) 2020
BstHHI GCGC 1 cut(s) 2020
BstKTI GATC 9 cut(s) 140, 592, 646, 663, 1164, 1172, 1288, 1344, 1737
BstMBI GATC 9 cut(s) 137, 589, 643, 660, 1161, 1169, 1285, 1341, 1734
BstMWI GCNNNNNNNGC 4 cut(s) 315, 500, 1148, 2024
BstNI CCWGG 3 cut(s) 332, 597, 916
BstNSI RCATGY 4 cut(s) 120, 161, 1243, 1647
BstPI GGTNACC 1 cut(s) 293
BstSCI CCNGG 3 cut(s) 330, 595, 914
BstUI CGCG 1 cut(s) 2020
BstV1I GCAGC 2 cut(s) 107, 185
BstV2I GAAGAC 2 cut(s) 46, 1367
BstXI CCANNNNNNTGG 1 cut(s) 305
Bsu36I CCTNAGG 1 cut(s) 630
BsuI GTATCC 1 cut(s) 1794
BsuRI GGCC 3 cut(s) 335, 914, 1560
BtsCI GGATG 6 cut(s) 188, 753, 946, 1584, 1608, 1836
BtsI GCAGTG 1 cut(s) 1248
BtsIMutI CAGTG 3 cut(s) 456, 1248, 1632
Cac8I GCNNGC 4 cut(s) 118, 337, 347, 1558
CfoI GCGC 1 cut(s) 2020
Cfr13I GGNCC 1 cut(s) 1955
CseI GACGC 3 cut(s) 230, 307, 1703
Csp6I GTAC 3 cut(s) 377, 436, 1279
CspCI CAANNNNNGTGG 2 cut(s) 265, 300
CviQI GTAC 3 cut(s) 377, 436, 1279
DdeI CTNAG 7 cut(s) 236, 630, 1187, 1282, 1330, 1806, 1856
DpnI GATC 9 cut(s) 139, 591, 645, 662, 1163, 1171, 1287, 1343, 1736
DpnII GATC 9 cut(s) 137, 589, 643, 660, 1161, 1169, 1285, 1341, 1734
DraIII CACNNNGTG 1 cut(s) 758
EaeI YGGCCR 2 cut(s) 333, 1558
Eam1104I CTCTTC 4 cut(s) 35, 51, 678, 1546
EarI CTCTTC 4 cut(s) 35, 51, 678, 1546
EciI GGCGGA 1 cut(s) 8
Eco32I GATATC 1 cut(s) 637
Eco47I GGWCC 1 cut(s) 1955
Eco57I CTGAAG 3 cut(s) 702, 1158, 1520
Eco72I CACGTG 1 cut(s) 353
Eco81I CCTNAGG 1 cut(s) 630
Eco88I CYCGRG 1 cut(s) 1438
Eco91I GGTNACC 1 cut(s) 293
EcoO65I GGTNACC 1 cut(s) 293
EcoRI GAATTC 3 cut(s) 984, 1084, 1220
EcoRII CCWGG 3 cut(s) 330, 595, 914
EcoRV GATATC 1 cut(s) 637
EcoT22I ATGCAT 3 cut(s) 122, 1245, 1512
FalI AAGNNNNNCTT 4 cut(s) 1170, 1202, 1749, 1781
FaqI GGGAC 1 cut(s) 1968
FauI CCCGC 1 cut(s) 1400
FbaI TGATCA 2 cut(s) 643, 660
Fnu4HI GCNGC 2 cut(s) 96, 174
FokI GGATG 6 cut(s) 175, 760, 933, 1591, 1615, 1843
Fsp4HI GCNGC 2 cut(s) 96, 174
FspBI CTAG 6 cut(s) 50, 372, 408, 606, 1026, 1035
GlaI GCGC 1 cut(s) 2019
GluI GCNGC 2 cut(s) 96, 174
GsuI CTGGAG 2 cut(s) 1984, 2010
HaeIII GGCC 3 cut(s) 335, 914, 1560
HapII CCGG 2 cut(s) 572, 886
HgaI GACGC 3 cut(s) 230, 307, 1703
HhaI GCGC 1 cut(s) 2020
Hin1I GRCGYC 1 cut(s) 222
Hin6I GCGC 1 cut(s) 2018
HinP1I GCGC 1 cut(s) 2018
HincII GTYRAC 3 cut(s) 469, 1688, 1716
HindII GTYRAC 3 cut(s) 469, 1688, 1716
HindIII AAGCTT 2 cut(s) 1020, 1346
HinfI GANTC 9 cut(s) 326, 600, 737, 1015, 1120, 1181, 1434, 1770, 1995
HpaI GTTAAC 1 cut(s) 1716
HpaII CCGG 2 cut(s) 572, 886
HphI GGTGA 5 cut(s) 143, 305, 785, 1119, 1213
Hpy166II GTNNAC 5 cut(s) 356, 469, 1688, 1716, 1915
Hpy188I TCNGA 5 cut(s) 127, 1169, 1285, 1666, 1857
Hpy188III TCNNGA 9 cut(s) 82, 238, 413, 572, 745, 815, 1063, 1438, 1652
Hpy8I GTNNAC 5 cut(s) 356, 469, 1688, 1716, 1915
HpyAV CCTTC 9 cut(s) 122, 128, 254, 812, 826, 1423, 1459, 1784, 1854
HpyCH4III ACNGT 2 cut(s) 718, 1301
HpyCH4IV ACGT 1 cut(s) 352
HpyF10VI GCNNNNNNNGC 4 cut(s) 315, 500, 1148, 2024
HpyF3I CTNAG 7 cut(s) 236, 630, 1187, 1282, 1330, 1806, 1856
HpySE526I ACGT 1 cut(s) 352
Hsp92I GRCGYC 1 cut(s) 222
HspAI GCGC 1 cut(s) 2018
Kpn2I TCCGGA 1 cut(s) 571
KpnI GGTACC 1 cut(s) 380
Ksp22I TGATCA 2 cut(s) 643, 660
KspAI GTTAAC 1 cut(s) 1716
Kzo9I GATC 9 cut(s) 137, 589, 643, 660, 1161, 1169, 1285, 1341, 1734
LguI GCTCTTC 1 cut(s) 1546
LmnI GCTCC 5 cut(s) 92, 240, 276, 817, 1393
Lsp1109I GCAGC 2 cut(s) 107, 185
LweI GCATC 4 cut(s) 348, 699, 1101, 1257
MaeI CTAG 6 cut(s) 50, 372, 408, 606, 1026, 1035
MaeII ACGT 1 cut(s) 352
MaeIII GTNAC 7 cut(s) 293, 750, 793, 835, 1125, 1310, 1322
MalI GATC 9 cut(s) 139, 591, 645, 662, 1163, 1171, 1287, 1343, 1736
MboI GATC 9 cut(s) 137, 589, 643, 660, 1161, 1169, 1285, 1341, 1734
MfeI CAATTG 1 cut(s) 1046
MhlI GDGCHC 2 cut(s) 456, 1239
MlsI TGGCCA 2 cut(s) 335, 1560
MluCI AATT 7 cut(s) 984, 1046, 1084, 1194, 1211, 1220, 1960
MluNI TGGCCA 2 cut(s) 335, 1560
MlyI GAGTC 2 cut(s) 1129, 1779
MmeI TCCRAC 2 cut(s) 411, 961
Mox20I TGGCCA 2 cut(s) 335, 1560
Mph1103I ATGCAT 3 cut(s) 122, 1245, 1512
MroI TCCGGA 1 cut(s) 571
MroXI GAANNNNTTC 1 cut(s) 264
MscI TGGCCA 2 cut(s) 335, 1560
MseI TTAA 3 cut(s) 1505, 1715, 2032
MslI CAYNNNNRTG 4 cut(s) 251, 459, 746, 1299
Msp20I TGGCCA 2 cut(s) 335, 1560
MspI CCGG 2 cut(s) 572, 886
MspR9I CCNGG 3 cut(s) 332, 597, 916
MunI CAATTG 1 cut(s) 1046
Mva1269I GAATGC 2 cut(s) 264, 496
MvaI CCWGG 3 cut(s) 332, 597, 916
MvnI CGCG 1 cut(s) 2020
MwoI GCNNNNNNNGC 4 cut(s) 315, 500, 1148, 2024
NdeII GATC 9 cut(s) 137, 589, 643, 660, 1161, 1169, 1285, 1341, 1734
NlaIV GGNNCC 5 cut(s) 242, 378, 813, 884, 1956
NmeAIII GCCGAG 1 cut(s) 1234
NmuCI GTSAC 5 cut(s) 293, 750, 793, 1125, 1310
NsiI ATGCAT 3 cut(s) 122, 1245, 1512
NspI RCATGY 4 cut(s) 120, 161, 1243, 1647
NspV TTCGAA 1 cut(s) 1904
OliI CACNNNNGTG 1 cut(s) 1299
PaeI GCATGC 1 cut(s) 120
PaeR7I CTCGAG 1 cut(s) 1438
PciI ACATGT 1 cut(s) 1643
PciSI GCTCTTC 1 cut(s) 1546
PctI GAATGC 2 cut(s) 264, 496
PdmI GAANNNNTTC 1 cut(s) 264
PfeI GAWTC 7 cut(s) 326, 600, 737, 1015, 1181, 1434, 1995
PflFI GACNNNGTC 1 cut(s) 1058
PflMI CCANNNNNTGG 2 cut(s) 1924, 1964
PkrI GCNGC 2 cut(s) 97, 175
PleI GAGTC 2 cut(s) 1128, 1778
PmaCI CACGTG 1 cut(s) 353
PmlI CACGTG 1 cut(s) 353
PpsI GAGTC 2 cut(s) 1128, 1778
Ppu21I YACGTR 1 cut(s) 353
PscI ACATGT 1 cut(s) 1643
PsiI TTATAA 1 cut(s) 386
Psp6I CCWGG 3 cut(s) 330, 595, 914
PspCI CACGTG 1 cut(s) 353
PspEI GGTNACC 1 cut(s) 293
PspGI CCWGG 3 cut(s) 330, 595, 914
PspN4I GGNNCC 5 cut(s) 242, 378, 813, 884, 1956
PspPI GGNCC 1 cut(s) 1955
PsyI GACNNNGTC 1 cut(s) 1058
RsaI GTAC 3 cut(s) 378, 437, 1280
RsaNI GTAC 3 cut(s) 377, 436, 1279
RseI CAYNNNNRTG 4 cut(s) 251, 459, 746, 1299
SapI GCTCTTC 1 cut(s) 1546
SaqAI TTAA 3 cut(s) 1505, 1715, 2032
SatI GCNGC 2 cut(s) 96, 174
Sau3AI GATC 9 cut(s) 137, 589, 643, 660, 1161, 1169, 1285, 1341, 1734
Sau96I GGNCC 1 cut(s) 1955
ScaI AGTACT 1 cut(s) 1280
SchI GAGTC 2 cut(s) 1129, 1779
ScrFI CCNGG 3 cut(s) 332, 597, 916
SduI GDGCHC 2 cut(s) 456, 1239
SfaNI GCATC 4 cut(s) 348, 699, 1101, 1257
Sfr274I CTCGAG 1 cut(s) 1438
SfuI TTCGAA 1 cut(s) 1904
SinI GGWCC 1 cut(s) 1955
SlaI CTCGAG 1 cut(s) 1438
SmiMI CAYNNNNRTG 4 cut(s) 251, 459, 746, 1299
SmlI CTYRAG 1 cut(s) 1438
SmoI CTYRAG 1 cut(s) 1438
SphI GCATGC 1 cut(s) 120
Sse9I AATT 7 cut(s) 984, 1046, 1084, 1194, 1211, 1220, 1960
SsiI CCGC 2 cut(s) 19, 1393
SspMI CTAG 6 cut(s) 50, 372, 408, 606, 1026, 1035
StyD4I CCNGG 3 cut(s) 330, 595, 914
TaaI ACNGT 2 cut(s) 718, 1301
TaiI ACGT 1 cut(s) 355
TaqI TCGA 4 cut(s) 150, 1439, 1574, 1904
TasI AATT 7 cut(s) 984, 1046, 1084, 1194, 1211, 1220, 1960
TatI WGTACW 2 cut(s) 435, 1278
TfiI GAWTC 7 cut(s) 326, 600, 737, 1015, 1181, 1434, 1995
Tru1I TTAA 3 cut(s) 1505, 1715, 2032
Tru9I TTAA 3 cut(s) 1505, 1715, 2032
TscAI CASTG 3 cut(s) 463, 1255, 1639
TseFI GTSAC 5 cut(s) 293, 750, 793, 1125, 1310
TseI GCWGC 2 cut(s) 95, 173
Tsp45I GTSAC 5 cut(s) 293, 750, 793, 1125, 1310
TspDTI ATGAA 4 cut(s) 213, 912, 1233, 1595
TspGWI ACGGA 1 cut(s) 197
TspRI CASTG 3 cut(s) 463, 1255, 1639
Tth111I GACNNNGTC 1 cut(s) 1058
Van91I CCANNNNNTGG 2 cut(s) 1924, 1964
VpaK11BI GGWCC 1 cut(s) 1955
XapI RAATTY 5 cut(s) 984, 1084, 1194, 1211, 1220
XceI RCATGY 4 cut(s) 120, 161, 1243, 1647
XhoI CTCGAG 1 cut(s) 1438
XmnI GAANNNNTTC 1 cut(s) 264
XspI CTAG 6 cut(s) 50, 372, 408, 606, 1026, 1035
ZrmI AGTACT 1 cut(s) 1280
Zsp2I ATGCAT 3 cut(s) 122, 1245, 1512
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.