Prupe.2G040000_v2.0.a1
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
4353210 .. 4355326
2117 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G040000.1

Sequence Viewer

Length: 2100 bp
ATGACTTCCTCTTCCCATTTGCTTTCAATTATATCTCAGAAAATGGGAGGAAAGAGAACTCAAACTGATTCAGGAAGCAGATCATCAAGCTCATCCATTTTACAAGATGATCAAGAAGGCTTATCATTTTCCTCATCAAAAGCAGAGCTACTTTTCAACAACGCGCCAATTGTCTCATCCTACAACGACAAAATTCGCCCTATGCTTGATGCCATTGACAAGCTCCGCGTCCTCATGGTTATGGAGGAAGGCATCCAGCTGCCCACCATTGTTGTTGTGGGAGACCAGTCATCTGGCAAATCCAGTGTTCTTGAGTCCCTTGCCGGCATCAGCCTGCCGCGTGGACAAGGTATCTGCACAAGGGTTCCTCTCGTAATGAGGCTTCAGCACCACTCTGATCCTAAACCAGAGCTTTCACTGGAGTACAATGGCAGAGTTGAGCAGACTGATGAGGAAAACATTTCAGAAGACATTGTGAATGCCACGAATCTGATTGCAGGGGACAAAAAGGGAATTTCAGACACCCCATTGACCTTGTTGGTGAAGAAGAATGGTGTGCCCGATTTGACCATGGTTGACCTCCCTGGAATTACTAGAGTTCCAGTTCATGGCCAGCCTGAGAATATCAATGATCAAATCAAAGATATGATCATGAAGTATATAAAACCAGATGAGAGCATCATTTTGAATGTTTTATCTGCTTCTACTGATTTTAGCACATGTGAGTCAATTAGTATGTCGCGGAGTGTGGACAAAACTGGTGAGAGGACTCTGGCTGTGGTTACAAAGGTTGACATGGCACCAGAGGGACTGCTGGAGAAGGTTACAGCTGATGATGTGGACATTGGTCTTGGCTATGTCTGTGTAAGGAACCGGATTCGAGATGAAACGTATGAGGAGGCGAGGGCTATTGCGGATCGATTATTTAAAACTCATCCCCTTCTTTCAAAGATTGATAAGTCTATGGTTGGAATTCAGGTTTTGGCTGACAAGTTGGTCCAAATTCAAGCTGTTAGCATAGCTAGAAACTTGCCTGTTATTGTAAAGAAGATCAATGACAAGCTGAATTCTTACCTTTCAGAACTCAACAAATTGCCGAAAACTCTGTCAACTGTTGCTGAGGCCATGACTGTTTTTATGCAGATCATTGGAGCATCCAAAGAATCACTTAAGAAGATTGTTTTGATGGGAGAATTTGACGCGTTCCCGGATGACGAAATGCATTGCACGGCTAGGCTGGTTGAGATGAGATGCTCAATCAGTGCTCATATCAACTTCACGAGTGCAATGCGAGTGACTCCAAAAGAGATTGCGATTTTGGAGGAGGCGAAAGGTATCAACCTTCCCAATTTTGTTCAGCGCAATGCTTTTCTTATAATTTTGCGGGGAAAAGTGAAGGGGATTTCGAGCATACCTCTTGGGTTTGTTGAGCAGGTTTGGAATTATATTGAGAATGTGGTTTTGTCTGTGTTAATGAGAACTACAGAAGAATATTATCAGCTTCAGCTGTCTGCCAGAAGAGCATGCGAAAATCTTATTCAAAGGATGAAAGAAAGGTCCATTCATTGGATGACGGAGATTTTGGAAATGGAGAAGCTGACTGATTATACATGTAATCCGGAATATGTATCCGAATGGCATAGGCTCATGACTCAACAAGAAACATTCATCACAAAGGTATTTCGTAATTCTCATGATCTGGGACTTGGACCTCACACTGAGATAAAAATAAATGTAGAGGGAATCGGGATGGTTGAAGTTGGAGGTCTAATGAAGTACCCACATGTTCTATTGTCTCAAGCTTTCGACTTGAAAATGCTGATGACTGCATATTGGAATGTTGTGCTGAAAAGGTTGATTGATTCTGTGGCCTTGCATTTGCAGCTGAGTATTTCGAACCTTGTGAACAACGACTTGGAGACGGAGATTGTGAGTGAGTTAATGGGACCTAACCATGGTGATGGGATTGAGAGGATGATGGAGGAACCTCCATCAATTGCAGTGAAGCGCGAGAAGCTCATCAAGAGCATCAAAAAGCTCAAGGAGTCTAAAGAGGTTGTGTGTAAGATCATGGATGGCATCGTTACTTTTGCCAATTAA

Protein Analysis

700

Amino Acids

78.01

Weight (kDa)

5.82

Isoelectric Point (pI)

34.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000365)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G60500 AT1G60530
fragaria_vesca FvH4_4g34670 FvH4_7g03430 FvH4_7g03440 FvH4_7g03780
malus_domestica MD02G1282600.v1.1 MD02G1282700.v1.1 MD02G1282900.v1.1 MD14G1008400.v1.1 MD14G1008800.v1.1 MD14G1008900.v1.1 MD14G1009000.v1.1 MD14G1009200.v1.1 MD14G1009300.v1.1
prunus_persica Prupe.2G039500_v2.0.a1 Prupe.2G039600_v2.0.a1 Prupe.2G039800_v2.0.a1 Prupe.2G039900_v2.0.a1 Prupe.2G040000_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015300_v2.0.a1
pyrus_communis pycom02g24110 pycom02g24120 pycom14g00720 pycom14g00740 pycom14g00780
rosa_chinensis RchiOBHm_Chr1g0325781 RchiOBHm_Chr1g0326171 RchiOBHm_Chr1g0326211 RchiOBHm_Chr1g0327001 RchiOBHm_Chr1g0327051 RchiOBHm_Chr1g0327071 RchiOBHm_Chr1g0327091 RchiOBHm_Chr1g0327111 RchiOBHm_Chr2g0127731 RchiOBHm_Chr2g0127741 RchiOBHm_Chr4g0444021
rosa_laevigata RLG00000005864 RLG00000005866 RLG00000030044 RLG00000030045 RLG00000030047 RLG00000030048 RLG00000030083 RLG00000030106
rosa_multiflora Rmu_sc0000795.1_g000013 Rmu_sc0000795.1_g000046 Rmu_sc0000795.1_g000049 Rmu_sc0004240.1_g000005 Rmu_sc0004240.1_g000006 Rmu_sc0006009.1_g000005 Rmu_sc0015522.1_g000011 Rmu_sc0025852.1_g000001
rosa_roxburghii Rroxscaffold_4G00323340 Rroxscaffold_4G00323420 Rroxscaffold_4G00323950 Rroxscaffold_4G00324390 Rroxscaffold_5G00384590
rosa_rugosa Rorug01G0054400 Rorug01G0057700 Rorug01G0062800 Rorug01G0062900 Rorug01G0063200 Rorug01G0063300 Rorug04G0349000
rosa_samantha Rh1AG069900 Rh1AG070200 Rh1AG070400 Rh1AG070700 Rh1AG071000 Rh1AG074600 Rh1AG079800 Rh1AG080000 Rh1AG080600 Rh1BG057600 Rh1BG060000 Rh1BG064000 Rh1CG070400 Rh1CG073100 Rh1CG077500 Rh1CG077600 Rh1CG078000 Rh1CG078600 Rh1DG075100 Rh1DG079900 Rh1DG084000 Rh1DG084100 Rh1DG084400 Rh1DG084900 Rh1DG085000 Rh2BG332700 Rh4AG409800 Rh4BG420900 Rh4CG435200 Rh4DG416100
rosa_wichuraiana Rw1G005780 Rw1G005990 Rw1G006330 Rw1G006340 Rw1G006380 Rw1G006390 Rw2G026260 Rw4G035200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1376
AasI GACNNNNNNGTC 1 cut(s) 995
Acc36I ACCTGC 1 cut(s) 1423
AccB1I GGYRCC 1 cut(s) 799
AccB7I CCANNNNNTGG 2 cut(s) 608, 1566
AccII CGCG 6 cut(s) 164, 228, 340, 742, 1202, 2010
AccIII TCCGGA 1 cut(s) 1618
AciI CCGC 5 cut(s) 226, 338, 742, 914, 1384
AclWI GGATC 2 cut(s) 392, 924
AcoI YGGCCR 1 cut(s) 610
AcsI RAATTY 6 cut(s) 192, 513, 972, 1002, 1066, 1193
AcuI CTGAAG 2 cut(s) 368, 1487
AfaI GTAC 2 cut(s) 425, 1778
AfiI CCNNNNNNNGG 3 cut(s) 608, 1566, 1955
AflII CTTAAG 1 cut(s) 1169
AflIII ACRYGT 4 cut(s) 719, 1200, 1610, 1783
AgsI TTSAA 8 cut(s) 27, 157, 688, 948, 1007, 1541, 1757, 1813
AjnI CCWGG 1 cut(s) 583
AjuI GAANNNNNNNTTGG 2 cut(s) 1898, 1930
Alw21I GWGCWC 1 cut(s) 1267
Alw26I GTCTC 4 cut(s) 178, 276, 1800, 1913
AlwI GGATC 2 cut(s) 392, 924
Aor13HI TCCGGA 1 cut(s) 1618
AoxI GGCC 3 cut(s) 610, 1122, 1869
ApeKI GCWGC 2 cut(s) 259, 1882
ApoI RAATTY 6 cut(s) 192, 513, 972, 1002, 1066, 1193
ArsI GACNNNNNNTTYG 4 cut(s) 1091, 1123, 1564, 1596
AspLEI GCGC 3 cut(s) 166, 1362, 2010
AspS9I GGNCC 4 cut(s) 997, 1557, 1709, 1946
AsuC2I CCSGG 1 cut(s) 1208
AsuHPI GGTGA 3 cut(s) 553, 773, 1970
AsuII TTCGAA 1 cut(s) 1895
AvaII GGWCC 4 cut(s) 997, 1557, 1709, 1946
BaeGI GKGCMC 1 cut(s) 561
BalI TGGCCA 1 cut(s) 612
BanI GGYRCC 1 cut(s) 799
BarI GAAGNNNNNNTAC 2 cut(s) 366, 398
BauI CACGAG 1 cut(s) 1279
BbsI GAAGAC 1 cut(s) 474
Bbv12I GWGCWC 1 cut(s) 1267
BbvCI CCTCAGC 1 cut(s) 1119
BbvI GCAGC 2 cut(s) 246, 1894
BccI CCATC 6 cut(s) 1180, 1744, 1955, 1972, 1999, 2069
BceAI ACGGC 1 cut(s) 1245
BcgI CGANNNNNNTGC 2 cut(s) 1270, 1304
BciT130I CCWGG 1 cut(s) 585
BciVI GTATCC 1 cut(s) 1639
BclI TGATCA 3 cut(s) 109, 631, 648
BcnI CCSGG 1 cut(s) 1208
BcoDI GTCTC 4 cut(s) 178, 276, 1800, 1913
BfaI CTAG 3 cut(s) 594, 1023, 1233
BfmI CTRYAG 1 cut(s) 1482
BfrI CTTAAG 1 cut(s) 1169
BfuAI ACCTGC 1 cut(s) 1423
BfuI GTATCC 1 cut(s) 1639
BisI GCNGC 3 cut(s) 260, 338, 1883
BlsI GCNGC 3 cut(s) 261, 339, 1884
Bme1390I CCNGG 2 cut(s) 585, 1208
Bme18I GGWCC 4 cut(s) 997, 1557, 1709, 1946
BmgT120I GGNCC 4 cut(s) 997, 1557, 1709, 1946
BmiI GGNNCC 5 cut(s) 366, 801, 872, 1947, 1986
BmrFI CCNGG 2 cut(s) 585, 1208
BmsI GCATC 8 cut(s) 199, 261, 336, 687, 1163, 1241, 2037, 2088
BoxI GACNNNNGTC 1 cut(s) 846
BpiI GAAGAC 1 cut(s) 474
BplI GAGNNNNNCTC 2 cut(s) 1399, 1431
BpmI CTGGAG 2 cut(s) 440, 836
Bpu10I CCTNAGC 1 cut(s) 1119
Bpu14I TTCGAA 1 cut(s) 1895
BpuEI CTTGAG 3 cut(s) 332, 1782, 2024
BpuMI CCSGG 1 cut(s) 1208
Bsa29I ATCGAT 1 cut(s) 919
BsaI GGTCTC 1 cut(s) 276
BsaJI CCNNGG 3 cut(s) 570, 583, 1954
BsaWI WCCGGW 2 cut(s) 873, 1618
Bsc4I CCNNNNNNNGG 3 cut(s) 608, 1566, 1955
Bse118I RCCGGY 1 cut(s) 323
Bse1I ACTGG 5 cut(s) 286, 303, 423, 602, 763
Bse3DI GCAATG 3 cut(s) 1222, 1293, 1369
BseAI TCCGGA 1 cut(s) 1618
BseBI CCWGG 1 cut(s) 585
BseCI ATCGAT 1 cut(s) 919
BseDI CCNNGG 3 cut(s) 570, 583, 1954
BseLI CCNNNNNNNGG 3 cut(s) 608, 1566, 1955
BseMI GCAATG 3 cut(s) 1222, 1293, 1369
BseMII CTCAG 5 cut(s) 50, 609, 1110, 1710, 1877
BseNI ACTGG 5 cut(s) 286, 303, 423, 602, 763
BseRI GAGGAG 2 cut(s) 911, 1337
BseSI GKGCMC 1 cut(s) 561
BseXI GCAGC 2 cut(s) 246, 1894
BsgI GTGCAG 1 cut(s) 340
Bsh1236I CGCG 6 cut(s) 164, 228, 340, 742, 1202, 2010
BshFI GGCC 3 cut(s) 612, 1124, 1871
BshNI GGYRCC 1 cut(s) 799
BshVI ATCGAT 1 cut(s) 919
BsiHKAI GWGCWC 1 cut(s) 1267
BsiSI CCGG 4 cut(s) 324, 874, 1208, 1619
BslFI GGGAC 5 cut(s) 301, 515, 822, 1716, 1959
BslI CCNNNNNNNGG 3 cut(s) 608, 1566, 1955
BsmAI GTCTC 4 cut(s) 178, 276, 1800, 1913
BsmBI CGTCTC 1 cut(s) 1913
BsmFI GGGAC 5 cut(s) 301, 515, 822, 1716, 1959
BsmI GAATGC 1 cut(s) 484
BsnI GGCC 3 cut(s) 612, 1124, 1871
Bso31I GGTCTC 1 cut(s) 276
Bsp119I TTCGAA 1 cut(s) 1895
Bsp1286I GDGCHC 2 cut(s) 561, 1267
Bsp13I TCCGGA 1 cut(s) 1618
Bsp19I CCATGG 2 cut(s) 570, 1954
BspACI CCGC 5 cut(s) 226, 338, 742, 914, 1384
BspANI GGCC 3 cut(s) 612, 1124, 1871
BspCNI CTCAG 5 cut(s) 49, 610, 1111, 1711, 1878
BspDI ATCGAT 1 cut(s) 919
BspEI TCCGGA 1 cut(s) 1618
BspFNI CGCG 6 cut(s) 164, 228, 340, 742, 1202, 2010
BspHI TCATGA 3 cut(s) 651, 1647, 1693
BspLI GGNNCC 5 cut(s) 366, 801, 872, 1947, 1986
BspMI ACCTGC 1 cut(s) 1423
BspPI GGATC 2 cut(s) 392, 924
BspQI GCTCTTC 1 cut(s) 1513
BspT104I TTCGAA 1 cut(s) 1895
BspT107I GGYRCC 1 cut(s) 799
BspTI CTTAAG 1 cut(s) 1169
BspTNI GGTCTC 1 cut(s) 276
BsrDI GCAATG 3 cut(s) 1222, 1293, 1369
BsrFI RCCGGY 1 cut(s) 323
BsrI ACTGG 5 cut(s) 286, 303, 423, 602, 763
BssAI RCCGGY 1 cut(s) 323
BssECI CCNNGG 3 cut(s) 570, 583, 1954
BssSI CACGAG 1 cut(s) 1279
BssT1I CCWWGG 2 cut(s) 570, 1954
Bst2BI CACGAG 1 cut(s) 1279
Bst2UI CCWGG 1 cut(s) 585
Bst4CI ACNGT 2 cut(s) 1114, 1132
Bst6I CTCTTC 2 cut(s) 16, 1513
BstAFI CTTAAG 1 cut(s) 1169
BstBI TTCGAA 1 cut(s) 1895
BstC8I GCNNGC 4 cut(s) 325, 335, 614, 1525
BstDEI CTNAG 5 cut(s) 36, 618, 1119, 1719, 1886
BstDSI CCRYGG 2 cut(s) 570, 1954
BstFNI CGCG 6 cut(s) 164, 228, 340, 742, 1202, 2010
BstHHI GCGC 3 cut(s) 166, 1362, 2010
BstMAI GTCTC 4 cut(s) 178, 276, 1800, 1913
BstMWI GCNNNNNNNGC 3 cut(s) 1520, 1882, 2014
BstNI CCWGG 1 cut(s) 585
BstNSI RCATGY 4 cut(s) 723, 1527, 1614, 1787
BstPAI GACNNNNGTC 1 cut(s) 846
BstSCI CCNGG 2 cut(s) 583, 1206
BstSFI CTRYAG 1 cut(s) 1482
BstSLI GKGCMC 1 cut(s) 561
BstUI CGCG 6 cut(s) 164, 228, 340, 742, 1202, 2010
BstV1I GCAGC 2 cut(s) 246, 1894
BstV2I GAAGAC 1 cut(s) 474
BstXI CCANNNNNNTGG 2 cut(s) 293, 1961
Bsu15I ATCGAT 1 cut(s) 919
BsuI GTATCC 1 cut(s) 1639
BsuRI GGCC 3 cut(s) 612, 1124, 1871
BsuTUI ATCGAT 1 cut(s) 919
BtgI CCRYGG 2 cut(s) 570, 1954
BtsI GCAGTG 1 cut(s) 2007
BtsIMutI CAGTG 5 cut(s) 310, 416, 1267, 1716, 2007
BveI ACCTGC 1 cut(s) 1423
Cac8I GCNNGC 4 cut(s) 325, 335, 614, 1525
CciI TCATGA 3 cut(s) 651, 1647, 1693
CfoI GCGC 3 cut(s) 166, 1362, 2010
Cfr10I RCCGGY 1 cut(s) 323
Cfr13I GGNCC 4 cut(s) 997, 1557, 1709, 1946
ClaI ATCGAT 1 cut(s) 919
CseI GACGC 2 cut(s) 217, 1208
Csp6I GTAC 2 cut(s) 424, 1777
CspCI CAANNNNNGTGG 2 cut(s) 253, 288
CviQI GTAC 2 cut(s) 424, 1777
DdeI CTNAG 5 cut(s) 36, 618, 1119, 1719, 1886
DraI TTTAAA 1 cut(s) 928
DrdI GACNNNNNNGTC 1 cut(s) 995
DseDI GACNNNNNNGTC 1 cut(s) 995
EaeI YGGCCR 1 cut(s) 610
Eam1104I CTCTTC 2 cut(s) 16, 1513
EarI CTCTTC 2 cut(s) 16, 1513
Eco130I CCWWGG 2 cut(s) 570, 1954
Eco31I GGTCTC 1 cut(s) 276
Eco47I GGWCC 4 cut(s) 997, 1557, 1709, 1946
Eco57I CTGAAG 2 cut(s) 368, 1487
EcoO109I RGGNCCY 1 cut(s) 1946
EcoRI GAATTC 2 cut(s) 972, 1066
EcoRII CCWGG 1 cut(s) 583
EcoT14I CCWWGG 2 cut(s) 570, 1954
EcoT22I ATGCAT 1 cut(s) 1224
ErhI CCWWGG 2 cut(s) 570, 1954
Esp3I CGTCTC 1 cut(s) 1913
FalI AAGNNNNNCTT 2 cut(s) 1152, 1184
FaqI GGGAC 5 cut(s) 301, 515, 822, 1716, 1959
FauI CCCGC 1 cut(s) 1377
FbaI TGATCA 3 cut(s) 109, 631, 648
Fnu4HI GCNGC 3 cut(s) 260, 338, 1883
Fsp4HI GCNGC 3 cut(s) 260, 338, 1883
FspBI CTAG 3 cut(s) 594, 1023, 1233
GlaI GCGC 3 cut(s) 165, 1361, 2009
GluI GCNGC 3 cut(s) 260, 338, 1883
GsuI CTGGAG 2 cut(s) 440, 836
HaeIII GGCC 3 cut(s) 612, 1124, 1871
HapII CCGG 4 cut(s) 324, 874, 1208, 1619
HgaI GACGC 2 cut(s) 217, 1208
HhaI GCGC 3 cut(s) 166, 1362, 2010
Hin6I GCGC 3 cut(s) 164, 1360, 2008
HinP1I GCGC 3 cut(s) 164, 1360, 2008
HincII GTYRAC 3 cut(s) 577, 793, 1110
HindII GTYRAC 3 cut(s) 577, 793, 1110
HindIII AAGCTT 1 cut(s) 1800
HpaII CCGG 4 cut(s) 324, 874, 1208, 1619
HphI GGTGA 3 cut(s) 553, 773, 1970
Hpy166II GTNNAC 7 cut(s) 344, 577, 751, 793, 841, 1110, 1906
Hpy188I TCNGA 7 cut(s) 39, 397, 466, 492, 520, 1081, 1633
Hpy8I GTNNAC 7 cut(s) 344, 577, 751, 793, 841, 1110, 1906
HpyAV CCTTC 6 cut(s) 110, 242, 814, 950, 1352, 1390
HpyCH4III ACNGT 2 cut(s) 1114, 1132
HpyCH4IV ACGT 1 cut(s) 890
HpyF10VI GCNNNNNNNGC 3 cut(s) 1520, 1882, 2014
HpyF3I CTNAG 5 cut(s) 36, 618, 1119, 1719, 1886
HpySE526I ACGT 1 cut(s) 890
HspAI GCGC 3 cut(s) 164, 1360, 2008
Kpn2I TCCGGA 1 cut(s) 1618
KroI GCCGGC 1 cut(s) 323
KroNI GCCGGC 1 cut(s) 325
Ksp22I TGATCA 3 cut(s) 109, 631, 648
LguI GCTCTTC 1 cut(s) 1513
LmnI GCTCC 2 cut(s) 228, 1151
Lsp1109I GCAGC 2 cut(s) 246, 1894
LweI GCATC 8 cut(s) 199, 261, 336, 687, 1163, 1241, 2037, 2088
MaeI CTAG 3 cut(s) 594, 1023, 1233
MaeII ACGT 1 cut(s) 890
MaeIII GTNAC 4 cut(s) 781, 823, 1294, 2083
MboII GAAGA 8 cut(s) 3, 479, 556, 559, 1060, 1186, 1499, 1530
MfeI CAATTG 2 cut(s) 168, 1995
MhlI GDGCHC 2 cut(s) 561, 1267
MlsI TGGCCA 1 cut(s) 612
MluI ACGCGT 1 cut(s) 1200
MluNI TGGCCA 1 cut(s) 612
MlyI GAGTC 6 cut(s) 323, 734, 763, 1291, 1645, 2054
MmeI TCCRAC 2 cut(s) 949, 1741
Mox20I TGGCCA 1 cut(s) 612
Mph1103I ATGCAT 1 cut(s) 1224
MroI TCCGGA 1 cut(s) 1618
MroNI GCCGGC 1 cut(s) 323
MscI TGGCCA 1 cut(s) 612
MseI TTAA 5 cut(s) 927, 1170, 1472, 1940, 2098
MslI CAYNNNNRTG 2 cut(s) 239, 1959
Msp20I TGGCCA 1 cut(s) 612
MspA1I CMGCKG 4 cut(s) 259, 830, 1507, 1885
MspCI CTTAAG 1 cut(s) 1169
MspI CCGG 4 cut(s) 324, 874, 1208, 1619
MspR9I CCNGG 2 cut(s) 585, 1208
MunI CAATTG 2 cut(s) 168, 1995
Mva1269I GAATGC 1 cut(s) 484
MvaI CCWGG 1 cut(s) 585
MvnI CGCG 6 cut(s) 164, 228, 340, 742, 1202, 2010
MwoI GCNNNNNNNGC 3 cut(s) 1520, 1882, 2014
NaeI GCCGGC 1 cut(s) 325
NciI CCSGG 1 cut(s) 1208
NcoI CCATGG 2 cut(s) 570, 1954
NgoMIV GCCGGC 1 cut(s) 323
NlaIV GGNNCC 5 cut(s) 366, 801, 872, 1947, 1986
NmuCI GTSAC 1 cut(s) 1294
NsiI ATGCAT 1 cut(s) 1224
NspI RCATGY 4 cut(s) 723, 1527, 1614, 1787
NspV TTCGAA 1 cut(s) 1895
PaeI GCATGC 1 cut(s) 1527
PagI TCATGA 3 cut(s) 651, 1647, 1693
PciI ACATGT 3 cut(s) 719, 1610, 1783
PciSI GCTCTTC 1 cut(s) 1513
PctI GAATGC 1 cut(s) 484
PdiI GCCGGC 1 cut(s) 325
PfeI GAWTC 6 cut(s) 68, 487, 877, 1163, 1743, 1862
PflMI CCANNNNNTGG 2 cut(s) 608, 1566
PfoI TCCNGGA 1 cut(s) 1206
PkrI GCNGC 3 cut(s) 261, 339, 1884
PleI GAGTC 6 cut(s) 322, 733, 763, 1291, 1645, 2053
PpsI GAGTC 6 cut(s) 322, 733, 763, 1291, 1645, 2053
PpuMI RGGWCCY 1 cut(s) 1946
PscI ACATGT 3 cut(s) 719, 1610, 1783
PshAI GACNNNNGTC 1 cut(s) 846
PsiI TTATAA 1 cut(s) 1376
Psp5II RGGWCCY 1 cut(s) 1946
Psp6I CCWGG 1 cut(s) 583
PspGI CCWGG 1 cut(s) 583
PspN4I GGNNCC 5 cut(s) 366, 801, 872, 1947, 1986
PspPI GGNCC 4 cut(s) 997, 1557, 1709, 1946
PspPPI RGGWCCY 1 cut(s) 1946
PvuII CAGCTG 4 cut(s) 259, 830, 1507, 1885
RsaI GTAC 2 cut(s) 425, 1778
RsaNI GTAC 2 cut(s) 424, 1777
RseI CAYNNNNRTG 2 cut(s) 239, 1959
SapI GCTCTTC 1 cut(s) 1513
SaqAI TTAA 5 cut(s) 927, 1170, 1472, 1940, 2098
SatI GCNGC 3 cut(s) 260, 338, 1883
Sau96I GGNCC 4 cut(s) 997, 1557, 1709, 1946
SchI GAGTC 6 cut(s) 323, 734, 763, 1291, 1645, 2054
ScrFI CCNGG 2 cut(s) 585, 1208
SduI GDGCHC 2 cut(s) 561, 1267
SfaNI GCATC 8 cut(s) 199, 261, 336, 687, 1163, 1241, 2037, 2088
SfcI CTRYAG 1 cut(s) 1482
SfuI TTCGAA 1 cut(s) 1895
SinI GGWCC 4 cut(s) 997, 1557, 1709, 1946
SmiMI CAYNNNNRTG 2 cut(s) 239, 1959
SmlI CTYRAG 4 cut(s) 311, 1169, 1797, 2039
SmoI CTYRAG 4 cut(s) 311, 1169, 1797, 2039
SphI GCATGC 1 cut(s) 1527
SsiI CCGC 5 cut(s) 226, 338, 742, 914, 1384
SspI AATATT 1 cut(s) 1493
SspMI CTAG 3 cut(s) 594, 1023, 1233
StyD4I CCNGG 2 cut(s) 583, 1206
StyI CCWWGG 2 cut(s) 570, 1954
TaaI ACNGT 2 cut(s) 1114, 1132
TaiI ACGT 1 cut(s) 893
TaqI TCGA 5 cut(s) 880, 919, 1406, 1806, 1895
TatI WGTACW 1 cut(s) 423
TauI GCSGC 1 cut(s) 340
TfiI GAWTC 6 cut(s) 68, 487, 877, 1163, 1743, 1862
Tru1I TTAA 5 cut(s) 927, 1170, 1472, 1940, 2098
Tru9I TTAA 5 cut(s) 927, 1170, 1472, 1940, 2098
TscAI CASTG 5 cut(s) 310, 423, 1267, 1723, 2007
TseFI GTSAC 1 cut(s) 1294
TseI GCWGC 2 cut(s) 259, 1882
Tsp45I GTSAC 1 cut(s) 1294
TspDTI ATGAA 7 cut(s) 596, 668, 900, 1553, 1562, 1657, 1787
TspGWI ACGGA 2 cut(s) 1589, 1937
TspRI CASTG 5 cut(s) 310, 423, 1267, 1723, 2007
Van91I CCANNNNNTGG 2 cut(s) 608, 1566
Vha464I CTTAAG 1 cut(s) 1169
VpaK11BI GGWCC 4 cut(s) 997, 1557, 1709, 1946
XapI RAATTY 6 cut(s) 192, 513, 972, 1002, 1066, 1193
XceI RCATGY 4 cut(s) 723, 1527, 1614, 1787
XcmI CCANNNNNNNNNTGG 1 cut(s) 274
XspI CTAG 3 cut(s) 594, 1023, 1233
Zsp2I ATGCAT 1 cut(s) 1224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.