RchiOBHm_Chr1g0327051
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
15624803 .. 15627229
2427 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55661

Sequence Viewer

Length: 2193 bp
ATGGGAGCAGCAGAGCAAACAGATTTAGCATGCATTTCAGAAGGTGAAAGATCATCATGTGTAGAACAACATGCCATCATTGAAGCAGCACCGATTGTATCATCCTACAATGACAAAATCCGTCCTCTCCTTGGCGCCTTTGACAAGCTCAGGAGCCTGATCATGTCAATACATCAGATTATCAAGAAGATGGGAGCATCAAAGCAAACAGATTCAGCATGCATTTCAGAAGGTGAAGGATCATCATGTGTAGAGCAACATGCCGTCATTGAAGCAGCACCAATTGTGTCATCCTACAATGACAAAATCCGTCCTCTCCTTGACGCCATTGACAAGCTCAGGAGCCTCATGGTTATGGAGGAAGGCATTCAGCTCCCCACCATTGTTGTTGTAGGTGACCAATCATCTGGCAAGTCAAGCGTCCTTGAATCCCTGGCCGGCATCAGCCTGCCACGTGGACAAGGTATCTGCACCAGGGTACCCCTTATAATGAGGCTTCAACACCACTCTAGACCTGAACCTGAGTTCCGGTTGGAGTACAATGGCAAAGTTGAGCACACTGATGAGGTCAAAATTGCTGATGATATTGTCAATGCCACCAATGTTATTGCTGGTGGAGGTAAGGGAATTTCTAACACCCCATTGACTTTGTTGGTGAAAAAGAATGGTGTTCCGGATTTGACTATGGTTGATCTCCCTGGAATCACTAGAGTTCCTGTTCATGGTCAGCCCGAGGATATCTATGATCAAATCAAAAACATGATCATGCTGTATATCAAGCCTGAAGAGAGCATCATTCTCAATGTGTTGTCTGCTACTGTTGATTTTACAACTTGTGAATCCATCAGGATGTCACAGAGTGTGGATAAAGCTGGTGATAGGACCCTGGCTGTGGTCACAAAGGTTGATAAGGCGCCCGAAGGACTATTAGAGAAGGTTACAGCAGATGATGTTGGCATTGGTCTTGGTTATGTATGTGTGAGGAACCGGATTGGAGATGAAACTTATGAGGAGGCAAGGGCTAAATCTCAACAACTTTTTCAAACTCATCCTTTGCTGTCCAAGATTGACAAATCTATGGTTGGAATTCCAGTTCTGGCTCAAAAGTTGGTGCAGATTCAAGCTTCTAGCATAGCTAGAAACTTGCCAGACATTGTCAAGAAGATAAATGACAGGCTGAGTTCTTGTCTTTCAGAGTTGAACAAAATGCCAAAGAGTCTGTCATCTGTTGCTGAAGCCATGACCGCGTTTATGCAGATCATCGGATTATCAAAAGAATCTCTTAGGAAAATTCTGATGAGAGGAGAATTTGATGAATTTCCTGATGACAAGCACATGCATTGCACTGCTCGGCTCTATAAGATGCTCAATCAGTACTCAGATCAACTTCACAAGTGTGAAGAAAGTGACCCAAAAAGTAACTTCTTAGTAGAGGAGATCAAGATTTTGGAGGAAGCAAATGGTATTAGTCTTCCGAATTTTGTTCCCCGAAATGCTTTTCTTGTTATCTTGCAGGGAAAAGTGAAGGGAATCTCGAGCATACCTGTTGGATTTGTTGAGAAGGTTTGGAGTTATATTGAAGAAGTGGTTATGTCTGTGTTAATGCATAATACAGAAAACTATTATCAGCTTCAGGTATGCACCAGAAGAGCTGGCCATAATCTTATAACAAGGATGAAAGAAAGGTCAGTTGAGTGGACGATGGAGATGGTGGAAATGGAGAAGCAGACTGATTATACAGGTAATCCAGAATATATATCCGAATGGAGCAGGCTGATGGGTCAACAAGACGCATTTGTACATGCGGTGTTATCTAAAAATGAATCTACGATCTCTATAGAGGGTATTGGGGAAGTTGAAGTTGGAGACCTTCGGCAGTATCCTCAAGTACTTCTCTCTCAGGCTTTCGACTTGAAAATGAGGATCACTGCCTATTGGAAAGTTGTTCTAAGAAGGCTTGTTGATTGTATGGCTTTGCATTTGCAGTTGAGTGTTTCAAAACTTGTGAACCAAGACATGGAGATTGAGATTGTGAATGAGTTGATGGGACCAAATTGTGGTGGTGGGATTGAGAAAATGCTGGTGGAATCTCCAGCAGTTGCCACCAAGCGCGAGAAGCTGATTAAGAGCATCAAAAAGCTCAAGGATTCCAAAGAGATTGTTGCTAAGATACTGGATGGTGTTGCTACCTAA

Protein Analysis

730

Amino Acids

81.01

Weight (kDa)

5.75

Isoelectric Point (pI)

45.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dynamin_N PF00350 128 - 302 4.7e-40 Dynamin family
Dynamin_M PF01031 310 - 592 9.3e-64 Dynamin central region
GED PF02212 634 - 724 1.4e-10 Dynamin GTPase effector domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000365)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G60500 AT1G60530
fragaria_vesca FvH4_4g34670 FvH4_7g03430 FvH4_7g03440 FvH4_7g03780
malus_domestica MD02G1282600.v1.1 MD02G1282700.v1.1 MD02G1282900.v1.1 MD14G1008400.v1.1 MD14G1008800.v1.1 MD14G1008900.v1.1 MD14G1009000.v1.1 MD14G1009200.v1.1 MD14G1009300.v1.1
prunus_persica Prupe.2G039500_v2.0.a1 Prupe.2G039600_v2.0.a1 Prupe.2G039800_v2.0.a1 Prupe.2G039900_v2.0.a1 Prupe.2G040000_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015300_v2.0.a1
pyrus_communis pycom02g24110 pycom02g24120 pycom14g00720 pycom14g00740 pycom14g00780
rosa_chinensis RchiOBHm_Chr1g0325781 RchiOBHm_Chr1g0326171 RchiOBHm_Chr1g0326211 RchiOBHm_Chr1g0327001 RchiOBHm_Chr1g0327051 RchiOBHm_Chr1g0327071 RchiOBHm_Chr1g0327091 RchiOBHm_Chr1g0327111 RchiOBHm_Chr2g0127731 RchiOBHm_Chr2g0127741 RchiOBHm_Chr4g0444021
rosa_laevigata RLG00000005864 RLG00000005866 RLG00000030044 RLG00000030045 RLG00000030047 RLG00000030048 RLG00000030083 RLG00000030106
rosa_multiflora Rmu_sc0000795.1_g000013 Rmu_sc0000795.1_g000046 Rmu_sc0000795.1_g000049 Rmu_sc0004240.1_g000005 Rmu_sc0004240.1_g000006 Rmu_sc0006009.1_g000005 Rmu_sc0015522.1_g000011 Rmu_sc0025852.1_g000001
rosa_roxburghii Rroxscaffold_4G00323340 Rroxscaffold_4G00323420 Rroxscaffold_4G00323950 Rroxscaffold_4G00324390 Rroxscaffold_5G00384590
rosa_rugosa Rorug01G0054400 Rorug01G0057700 Rorug01G0062800 Rorug01G0062900 Rorug01G0063200 Rorug01G0063300 Rorug04G0349000
rosa_samantha Rh1AG069900 Rh1AG070200 Rh1AG070400 Rh1AG070700 Rh1AG071000 Rh1AG074600 Rh1AG079800 Rh1AG080000 Rh1AG080600 Rh1BG057600 Rh1BG060000 Rh1BG064000 Rh1CG070400 Rh1CG073100 Rh1CG077500 Rh1CG077600 Rh1CG078000 Rh1CG078600 Rh1DG075100 Rh1DG079900 Rh1DG084000 Rh1DG084100 Rh1DG084400 Rh1DG084900 Rh1DG085000 Rh2BG332700 Rh4AG409800 Rh4BG420900 Rh4CG435200 Rh4DG416100
rosa_wichuraiana Rw1G005780 Rw1G005990 Rw1G006330 Rw1G006340 Rw1G006380 Rw1G006390 Rw2G026260 Rw4G035200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 488, 1667
Acc65I GGTACC 1 cut(s) 478
AccB1I GGYRCC 3 cut(s) 134, 478, 913
AccB7I CCANNNNNTGG 2 cut(s) 2017, 2057
AccII CGCG 2 cut(s) 1247, 2112
AccIII TCCGGA 1 cut(s) 673
AciI CCGC 2 cut(s) 1245, 1805
AclWI GGATC 2 cut(s) 247, 1931
AcoI YGGCCR 2 cut(s) 435, 1654
AcsI RAATTY 6 cut(s) 627, 1086, 1290, 1307, 1316, 1477
AcuI CTGAAG 3 cut(s) 804, 1254, 1616
AcvI CACGTG 1 cut(s) 455
AcyI GRCGYC 3 cut(s) 135, 324, 914
AdeI CACNNNGTG 1 cut(s) 860
AfaI GTAC 5 cut(s) 480, 539, 1376, 1800, 1890
AfiI CCNNNNNNNGG 5 cut(s) 131, 722, 892, 2017, 2057
AjnI CCWGG 4 cut(s) 432, 473, 697, 885
AjuI GAANNNNNNNTTGG 2 cut(s) 1845, 1877
AleI CACNNNNGTG 1 cut(s) 1395
AloI GAACNNNNNNTCC 4 cut(s) 510, 542, 1077, 1109
Alw21I GWGCWC 1 cut(s) 558
Alw26I GTCTC 1 cut(s) 1860
AlwI GGATC 2 cut(s) 247, 1931
Ama87I CYCGRG 2 cut(s) 731, 1534
Aor13HI TCCGGA 1 cut(s) 673
AoxI GGCC 2 cut(s) 435, 1654
ApeKI GCWGC 3 cut(s) 8, 86, 275
ApoI RAATTY 6 cut(s) 627, 1086, 1290, 1307, 1316, 1477
ArsI GACNNNNNNTTYG 2 cut(s) 1205, 1237
Asp700I GAANNNNTTC 1 cut(s) 366
Asp718I GGTACC 1 cut(s) 478
AspLEI GCGC 3 cut(s) 137, 916, 2112
AspS9I GGNCC 2 cut(s) 882, 2048
AsuHPI GGTGA 5 cut(s) 56, 245, 407, 667, 887
AvaI CYCGRG 2 cut(s) 731, 1534
AvaII GGWCC 2 cut(s) 882, 2048
BaeI ACNNNNGTAYC 2 cut(s) 462, 495
BalI TGGCCA 1 cut(s) 1656
BanI GGYRCC 3 cut(s) 134, 478, 913
BbrPI CACGTG 1 cut(s) 455
BbsI GAAGAC 1 cut(s) 1463
Bbv12I GWGCWC 1 cut(s) 558
BbvI GCAGC 3 cut(s) 20, 98, 287
BccI CCATC 8 cut(s) 83, 184, 851, 1696, 1702, 1771, 2038, 2171
BceAI ACGGC 1 cut(s) 248
BciT130I CCWGG 4 cut(s) 434, 475, 699, 887
BciVI GTATCC 1 cut(s) 1890
BclI TGATCA 3 cut(s) 159, 745, 762
BcoDI GTCTC 1 cut(s) 1860
BfaI CTAG 4 cut(s) 510, 708, 1128, 1137
BfmI CTRYAG 1 cut(s) 1836
BfoI RGCGCY 2 cut(s) 138, 917
BfuI GTATCC 1 cut(s) 1890
BisI GCNGC 3 cut(s) 9, 87, 276
BlsI GCNGC 3 cut(s) 10, 88, 277
BmcAI AGTACT 2 cut(s) 1376, 1890
Bme1390I CCNGG 4 cut(s) 434, 475, 699, 887
Bme18I GGWCC 2 cut(s) 882, 2048
BmeT110I CYCGRG 2 cut(s) 731, 1534
BmgT120I GGNCC 2 cut(s) 882, 2048
BmiI GGNNCC 8 cut(s) 136, 155, 344, 480, 884, 915, 986, 2049
BmrFI CCNGG 4 cut(s) 434, 475, 699, 887
BmsI GCATC 5 cut(s) 206, 450, 801, 1353, 2139
BpiI GAAGAC 1 cut(s) 1463
BpmI CTGGAG 1 cut(s) 2076
Bpu10I CCTNAGC 2 cut(s) 149, 338
BpuEI CTTGAG 2 cut(s) 1869, 2126
BsaAI YACGTR 1 cut(s) 455
BsaHI GRCGYC 3 cut(s) 135, 324, 914
BsaI GGTCTC 1 cut(s) 1860
BsaJI CCNNGG 6 cut(s) 130, 432, 474, 697, 732, 885
BsaWI WCCGGW 3 cut(s) 528, 673, 987
Bsc4I CCNNNNNNNGG 5 cut(s) 131, 722, 892, 2017, 2057
Bse118I RCCGGY 1 cut(s) 437
Bse1I ACTGG 2 cut(s) 1091, 2178
Bse3DI GCAATG 1 cut(s) 1339
BseAI TCCGGA 1 cut(s) 673
BseBI CCWGG 4 cut(s) 434, 475, 699, 887
BseDI CCNNGG 6 cut(s) 130, 432, 474, 697, 732, 885
BseGI GGATG 6 cut(s) 101, 290, 855, 1048, 1680, 2182
BseLI CCNNNNNNNGG 5 cut(s) 131, 722, 892, 2017, 2057
BseMI GCAATG 1 cut(s) 1339
BseMII CTCAG 6 cut(s) 163, 352, 513, 1169, 1392, 1913
BseNI ACTGG 2 cut(s) 1091, 2178
BseRI GAGGAG 3 cut(s) 1025, 1317, 1448
BseXI GCAGC 3 cut(s) 20, 98, 287
BsgI GTGCAG 2 cut(s) 454, 1133
Bsh1236I CGCG 2 cut(s) 1247, 2112
BshFI GGCC 2 cut(s) 437, 1656
BshNI GGYRCC 3 cut(s) 134, 478, 913
BsiHKAI GWGCWC 1 cut(s) 558
BsiHKCI CYCGRG 2 cut(s) 731, 1534
BsiSI CCGG 4 cut(s) 438, 529, 674, 988
BslFI GGGAC 1 cut(s) 2061
BslI CCNNNNNNNGG 5 cut(s) 131, 722, 892, 2017, 2057
BsmAI GTCTC 1 cut(s) 1860
BsmFI GGGAC 1 cut(s) 2061
BsmI GAATGC 1 cut(s) 366
BsnI GGCC 2 cut(s) 437, 1656
Bso31I GGTCTC 1 cut(s) 1860
BsoBI CYCGRG 2 cut(s) 731, 1534
Bsp1286I GDGCHC 1 cut(s) 558
Bsp13I TCCGGA 1 cut(s) 673
Bsp1407I TGTACA 1 cut(s) 1798
BspACI CCGC 2 cut(s) 1245, 1805
BspANI GGCC 2 cut(s) 437, 1656
BspCNI CTCAG 6 cut(s) 162, 351, 514, 1170, 1391, 1912
BspEI TCCGGA 1 cut(s) 673
BspFNI CGCG 2 cut(s) 1247, 2112
BspLI GGNNCC 8 cut(s) 136, 155, 344, 480, 884, 915, 986, 2049
BspPI GGATC 2 cut(s) 247, 1931
BspQI GCTCTTC 1 cut(s) 1642
BspT107I GGYRCC 3 cut(s) 134, 478, 913
BspTNI GGTCTC 1 cut(s) 1860
BsrDI GCAATG 1 cut(s) 1339
BsrFI RCCGGY 1 cut(s) 437
BsrGI TGTACA 1 cut(s) 1798
BsrI ACTGG 2 cut(s) 1091, 2178
BssAI RCCGGY 1 cut(s) 437
BssECI CCNNGG 6 cut(s) 130, 432, 474, 697, 732, 885
BssNI GRCGYC 3 cut(s) 135, 324, 914
BssT1I CCWWGG 1 cut(s) 130
Bst2UI CCWGG 4 cut(s) 434, 475, 699, 887
Bst4CI ACNGT 1 cut(s) 820
Bst6I CTCTTC 2 cut(s) 780, 1642
BstACI GRCGYC 3 cut(s) 135, 324, 914
BstAUI TGTACA 1 cut(s) 1798
BstBAI YACGTR 1 cut(s) 455
BstC8I GCNNGC 6 cut(s) 31, 220, 439, 449, 1654, 1772
BstEII GGTNACC 1 cut(s) 395
BstF5I GGATG 6 cut(s) 101, 290, 855, 1048, 1680, 2182
BstFNI CGCG 2 cut(s) 1247, 2112
BstH2I RGCGCY 2 cut(s) 138, 917
BstHHI GCGC 3 cut(s) 137, 916, 2112
BstMAI GTCTC 1 cut(s) 1860
BstMWI GCNNNNNNNGC 3 cut(s) 417, 1244, 2116
BstNI CCWGG 4 cut(s) 434, 475, 699, 887
BstNSI RCATGY 6 cut(s) 33, 74, 222, 263, 1339, 1805
BstPI GGTNACC 1 cut(s) 395
BstSCI CCNGG 4 cut(s) 432, 473, 697, 885
BstSFI CTRYAG 1 cut(s) 1836
BstUI CGCG 2 cut(s) 1247, 2112
BstV1I GCAGC 3 cut(s) 20, 98, 287
BstV2I GAAGAC 1 cut(s) 1463
BstXI CCANNNNNNTGG 1 cut(s) 407
BsuI GTATCC 1 cut(s) 1890
BsuRI GGCC 2 cut(s) 437, 1656
BtsCI GGATG 6 cut(s) 101, 290, 855, 1048, 1680, 2182
BtsI GCAGTG 2 cut(s) 1344, 1926
BtsIMutI CAGTG 3 cut(s) 558, 1344, 1926
Cac8I GCNNGC 6 cut(s) 31, 220, 439, 449, 1654, 1772
CfoI GCGC 3 cut(s) 137, 916, 2112
Cfr10I RCCGGY 1 cut(s) 437
Cfr13I GGNCC 2 cut(s) 882, 2048
CseI GACGC 3 cut(s) 332, 409, 1799
Csp6I GTAC 5 cut(s) 479, 538, 1375, 1799, 1889
CspCI CAANNNNNGTGG 2 cut(s) 367, 402
CviQI GTAC 5 cut(s) 479, 538, 1375, 1799, 1889
DinI GGCGCC 2 cut(s) 136, 915
DraIII CACNNNGTG 1 cut(s) 860
EaeI YGGCCR 2 cut(s) 435, 1654
Eam1104I CTCTTC 2 cut(s) 780, 1642
EarI CTCTTC 2 cut(s) 780, 1642
Eco130I CCWWGG 1 cut(s) 130
Eco31I GGTCTC 1 cut(s) 1860
Eco32I GATATC 1 cut(s) 739
Eco47I GGWCC 2 cut(s) 882, 2048
Eco57I CTGAAG 3 cut(s) 804, 1254, 1616
Eco72I CACGTG 1 cut(s) 455
Eco88I CYCGRG 2 cut(s) 731, 1534
Eco91I GGTNACC 1 cut(s) 395
EcoO109I RGGNCCY 1 cut(s) 882
EcoO65I GGTNACC 1 cut(s) 395
EcoRI GAATTC 1 cut(s) 1086
EcoRII CCWGG 4 cut(s) 432, 473, 697, 885
EcoRV GATATC 1 cut(s) 739
EcoT14I CCWWGG 1 cut(s) 130
EcoT22I ATGCAT 4 cut(s) 35, 224, 1341, 1608
EgeI GGCGCC 2 cut(s) 136, 915
EheI GGCGCC 2 cut(s) 136, 915
ErhI CCWWGG 1 cut(s) 130
FalI AAGNNNNNCTT 2 cut(s) 1266, 1298
FaqI GGGAC 1 cut(s) 2061
FbaI TGATCA 3 cut(s) 159, 745, 762
Fnu4HI GCNGC 3 cut(s) 9, 87, 276
FokI GGATG 6 cut(s) 88, 277, 862, 1035, 1687, 2189
Fsp4HI GCNGC 3 cut(s) 9, 87, 276
FspBI CTAG 4 cut(s) 510, 708, 1128, 1137
GlaI GCGC 3 cut(s) 136, 915, 2111
GluI GCNGC 3 cut(s) 9, 87, 276
GsuI CTGGAG 1 cut(s) 2076
HaeII RGCGCY 2 cut(s) 138, 917
HaeIII GGCC 2 cut(s) 437, 1656
HapII CCGG 4 cut(s) 438, 529, 674, 988
HgaI GACGC 3 cut(s) 332, 409, 1799
HhaI GCGC 3 cut(s) 137, 916, 2112
Hin1I GRCGYC 3 cut(s) 135, 324, 914
Hin6I GCGC 3 cut(s) 135, 914, 2110
HinP1I GCGC 3 cut(s) 135, 914, 2110
HincII GTYRAC 1 cut(s) 1784
HindII GTYRAC 1 cut(s) 1784
HindIII AAGCTT 1 cut(s) 1122
HpaII CCGG 4 cut(s) 438, 529, 674, 988
HphI GGTGA 5 cut(s) 56, 245, 407, 667, 887
Hpy166II GTNNAC 4 cut(s) 458, 1698, 1784, 2008
Hpy188I TCNGA 9 cut(s) 40, 177, 229, 1195, 1265, 1296, 1381, 1476, 1762
Hpy8I GTNNAC 4 cut(s) 458, 1698, 1784, 2008
HpyCH4III ACNGT 1 cut(s) 820
HpyCH4IV ACGT 1 cut(s) 454
HpyF10VI GCNNNNNNNGC 3 cut(s) 417, 1244, 2116
HpySE526I ACGT 1 cut(s) 454
Hsp92I GRCGYC 3 cut(s) 135, 324, 914
HspAI GCGC 3 cut(s) 135, 914, 2110
KasI GGCGCC 2 cut(s) 134, 913
Kpn2I TCCGGA 1 cut(s) 673
KpnI GGTACC 1 cut(s) 482
KroI GCCGGC 1 cut(s) 437
KroNI GCCGGC 1 cut(s) 439
Ksp22I TGATCA 3 cut(s) 159, 745, 762
LguI GCTCTTC 1 cut(s) 1642
LmnI GCTCC 6 cut(s) 5, 153, 194, 342, 378, 1767
Lsp1109I GCAGC 3 cut(s) 20, 98, 287
LweI GCATC 5 cut(s) 206, 450, 801, 1353, 2139
MaeI CTAG 4 cut(s) 510, 708, 1128, 1137
MaeII ACGT 1 cut(s) 454
MaeIII GTNAC 6 cut(s) 395, 852, 895, 937, 1406, 1418
MboII GAAGA 7 cut(s) 199, 797, 1174, 1412, 1463, 1592, 1659
MfeI CAATTG 1 cut(s) 282
MhlI GDGCHC 1 cut(s) 558
MlsI TGGCCA 1 cut(s) 1656
MluCI AATT 9 cut(s) 282, 573, 627, 1086, 1290, 1307, 1316, 1477, 2053
MluNI TGGCCA 1 cut(s) 1656
Mly113I GGCGCC 2 cut(s) 135, 914
MlyI GAGTC 1 cut(s) 1225
MmeI TCCRAC 4 cut(s) 513, 1063, 1528, 1843
Mox20I TGGCCA 1 cut(s) 1656
Mph1103I ATGCAT 4 cut(s) 35, 224, 1341, 1608
MroI TCCGGA 1 cut(s) 673
MroNI GCCGGC 1 cut(s) 437
MroXI GAANNNNTTC 1 cut(s) 366
MscI TGGCCA 1 cut(s) 1656
MseI TTAA 2 cut(s) 1601, 2124
MslI CAYNNNNRTG 5 cut(s) 353, 561, 764, 848, 1395
Msp20I TGGCCA 1 cut(s) 1656
MspI CCGG 4 cut(s) 438, 529, 674, 988
MspR9I CCNGG 4 cut(s) 434, 475, 699, 887
MunI CAATTG 1 cut(s) 282
Mva1269I GAATGC 1 cut(s) 366
MvaI CCWGG 4 cut(s) 434, 475, 699, 887
MvnI CGCG 2 cut(s) 1247, 2112
MwoI GCNNNNNNNGC 3 cut(s) 417, 1244, 2116
NaeI GCCGGC 1 cut(s) 439
NarI GGCGCC 2 cut(s) 135, 914
NgoMIV GCCGGC 1 cut(s) 437
NlaIV GGNNCC 8 cut(s) 136, 155, 344, 480, 884, 915, 986, 2049
NmeAIII GCCGAG 1 cut(s) 1330
NmuCI GTSAC 4 cut(s) 395, 852, 895, 1406
NsiI ATGCAT 4 cut(s) 35, 224, 1341, 1608
NspI RCATGY 6 cut(s) 33, 74, 222, 263, 1339, 1805
OliI CACNNNNGTG 1 cut(s) 1395
PaeI GCATGC 2 cut(s) 33, 222
PaeR7I CTCGAG 1 cut(s) 1534
PciSI GCTCTTC 1 cut(s) 1642
PctI GAATGC 1 cut(s) 366
PdiI GCCGGC 1 cut(s) 439
PdmI GAANNNNTTC 1 cut(s) 366
PflFI GACNNNGTC 1 cut(s) 1154
PflMI CCANNNNNTGG 2 cut(s) 2017, 2057
PkrI GCNGC 3 cut(s) 10, 88, 277
PleI GAGTC 1 cut(s) 1224
PluTI GGCGCC 2 cut(s) 138, 917
PmaCI CACGTG 1 cut(s) 455
PmlI CACGTG 1 cut(s) 455
PpsI GAGTC 1 cut(s) 1224
Ppu21I YACGTR 1 cut(s) 455
PpuMI RGGWCCY 1 cut(s) 882
PsiI TTATAA 2 cut(s) 488, 1667
Psp5II RGGWCCY 1 cut(s) 882
Psp6I CCWGG 4 cut(s) 432, 473, 697, 885
PspCI CACGTG 1 cut(s) 455
PspEI GGTNACC 1 cut(s) 395
PspGI CCWGG 4 cut(s) 432, 473, 697, 885
PspN4I GGNNCC 8 cut(s) 136, 155, 344, 480, 884, 915, 986, 2049
PspPI GGNCC 2 cut(s) 882, 2048
PspPPI RGGWCCY 1 cut(s) 882
PsyI GACNNNGTC 1 cut(s) 1154
RsaI GTAC 5 cut(s) 480, 539, 1376, 1800, 1890
RsaNI GTAC 5 cut(s) 479, 538, 1375, 1799, 1889
RseI CAYNNNNRTG 5 cut(s) 353, 561, 764, 848, 1395
SapI GCTCTTC 1 cut(s) 1642
SaqAI TTAA 2 cut(s) 1601, 2124
SatI GCNGC 3 cut(s) 9, 87, 276
Sau96I GGNCC 2 cut(s) 882, 2048
ScaI AGTACT 2 cut(s) 1376, 1890
SchI GAGTC 1 cut(s) 1225
ScrFI CCNGG 4 cut(s) 434, 475, 699, 887
SduI GDGCHC 1 cut(s) 558
SfaNI GCATC 5 cut(s) 206, 450, 801, 1353, 2139
SfcI CTRYAG 1 cut(s) 1836
SfoI GGCGCC 2 cut(s) 136, 915
Sfr274I CTCGAG 1 cut(s) 1534
SinI GGWCC 2 cut(s) 882, 2048
SlaI CTCGAG 1 cut(s) 1534
SmiMI CAYNNNNRTG 5 cut(s) 353, 561, 764, 848, 1395
SmlI CTYRAG 3 cut(s) 1534, 1884, 2141
SmoI CTYRAG 3 cut(s) 1534, 1884, 2141
SphI GCATGC 2 cut(s) 33, 222
Sse9I AATT 9 cut(s) 282, 573, 627, 1086, 1290, 1307, 1316, 1477, 2053
SsiI CCGC 2 cut(s) 1245, 1805
SspDI GGCGCC 2 cut(s) 134, 913
SspMI CTAG 4 cut(s) 510, 708, 1128, 1137
StyD4I CCNGG 4 cut(s) 432, 473, 697, 885
StyI CCWWGG 1 cut(s) 130
TaaI ACNGT 1 cut(s) 820
TaiI ACGT 1 cut(s) 457
TaqI TCGA 2 cut(s) 1535, 1908
TasI AATT 9 cut(s) 282, 573, 627, 1086, 1290, 1307, 1316, 1477, 2053
TatI WGTACW 4 cut(s) 537, 1374, 1798, 1888
Tru1I TTAA 2 cut(s) 1601, 2124
Tru9I TTAA 2 cut(s) 1601, 2124
TscAI CASTG 3 cut(s) 565, 1351, 1933
TseFI GTSAC 4 cut(s) 395, 852, 895, 1406
TseI GCWGC 3 cut(s) 8, 86, 275
Tsp45I GTSAC 4 cut(s) 395, 852, 895, 1406
TspDTI ATGAA 5 cut(s) 710, 1014, 1329, 1691, 1836
TspGWI ACGGA 2 cut(s) 110, 299
TspRI CASTG 3 cut(s) 565, 1351, 1933
Tth111I GACNNNGTC 1 cut(s) 1154
Van91I CCANNNNNTGG 2 cut(s) 2017, 2057
VpaK11BI GGWCC 2 cut(s) 882, 2048
XapI RAATTY 6 cut(s) 627, 1086, 1290, 1307, 1316, 1477
XbaI TCTAGA 1 cut(s) 509
XceI RCATGY 6 cut(s) 33, 74, 222, 263, 1339, 1805
XhoI CTCGAG 1 cut(s) 1534
XmnI GAANNNNTTC 1 cut(s) 366
XspI CTAG 4 cut(s) 510, 708, 1128, 1137
ZrmI AGTACT 2 cut(s) 1376, 1890
Zsp2I ATGCAT 4 cut(s) 35, 224, 1341, 1608
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.