Rh1AG071000
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Forward (+)
11883883 .. 11885973
2091 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG071000.1

Sequence Viewer

Length: 2091 bp
ATGGGAGGAAAGCATACTCAAACCGATTTAGGCGTCAAACCATCAAGCACCGTCTTCGCAAAATTTGAAGAAGGTTCATCATCATCAGTTTCACTTGCACCACGAGCACGTAATGAAGCAGACCAACAGCAACATGCCGTATCTCTCAACGTCAAAGAGGCACCGATTGTGTCTTCCTACAACGACAAAATCCGTCCCCTCCTAGATGCCGTTGACAAGCTCCGTAACCTGATGGTTATGGAAGAAGGGATCCAGCTCCCCACTATTGTCGTCGTCGGAGACCAATCATCTGGAAAGTCTAGCGTCCTGGAATCCCTCGCGAGCATCAGCCTGCCACGCGGACAAGGTATCTGCACCAGGGTGCCTCTTATAATGAGGCTTCAACACCATTCAAGTTCAGAACCGGAGCTTTCCTTGGAATACAATGGTAAAGTTGAGCGGACTGATGAGGGCAGAGTTTCTGAAGATATTGTTAAAGCGACTGATGATATTGCAGGCGGAGGTAAGGGTATCTCTAACACGCCTTTAACTCTGTTAGTGAGGAAGAATGGTGTTCCGGATTTAACAATGGTGGATCTCCCTGGAATCACCAGAGTTCCTGTTCATGGTCAGCCTGAGAATATCTATGACCAGATCAAAGATATGATCATGGAATATATAAATCCTGATCAGAGTATCATTCTGAATGTATTATCGGCTACTGTCGATTTTACCACTTGTGAATCAATTAGGATGTCACAGAGTGTGGACAAAACTGGTGAGAGGACTCTTGCTGTGGTTACAAAAGTTGACAAGGCTCCGGAGGGACTTGTAGAGAAAGTAACAGGTGATGATGTCAACATAGGGCTTGGCTATGTCTGTGTAAGGAATAGGATTGGAGAGGAAACCTATGAGGAGGCAAGGGCTTTCTCTGACCAACTATTCCAAACTCATCCTCTGCTTTCTAAAATTGATAAATCCATGGTTGGAGTTCATGTTTTAGCACAGAAGTTGGTGCAAATTCAAGCTACAAGTATAGCCAGGAGCTTACCTGAGATCGTGAAGAAGATAGATGACAAGCTGAATTTTTGTCTTTCGGAGCTGAACAAACTGCCTAAAGGTCTTTCATCTTTTGCTGAGGCGATAACGGCTTTCATGCAGATAATTGGATCGTCGAAAGAATCGCTTAGTAAAATTCTTGTGAGAGGAGAATTTGATGAGTACCCAGAAGAGAAGCACAAGCATGGGACAGCTAGACTGGTTGAGTTGCTTAATCAGTATTCTGAAGAACTGCACGAGTGTGATGGAACTGATGTGGCAAGTAATTTCTTGATGCAGGAGATTAGGATTTTAGGGGAGGCAAAACGTATGAGTCTTCCAAATTTTCTTCCCCGCAGTGCTTTTCTGGTTATTTTGCAGGGAAAAGTGAAGGGAATTTCGAGTATTCCGATTCGATTTGTTGAGAAGATATGGGACTACATTGAGGATGTGATGATATCTGTGTTAATGAAACATTCAGAAAATTATCTTCAGCTTCAGTTGTGTGCTAAAAGAGCTGGTCATAATTTGATCGCCAAGATGAAAGAAAGATCAGTTAAGTGGATGATGGAGATTGTAGAAATGGAGAAGAAAACTGATTATACATGTAATCCGGAGTATGTTACTGAATGGCAAAAGCTTATGAATAATCTGGGCGGATTTCTCCATGGAGTCCTGGAGGATGAGCACGAACCTCCTAGCTTTGTTGTGGACGATATTGGCATGGTTGAAGTTGAAGTTTTTAGGCAGTACCCGCGGGATCTTTTATCTGAAGCTTTTGACTTGAAAATGCGGATGATTGCATATTGGAAGGTCGTTCTGAGAAGGCTCGTTGATTCCATGGCATTGCATTTGCAGCTAAGTATTGCCAATCTTGTGAACAAGCACATGGAGATGAAGATTGTTACAGAATTAATGGGACCGAATAATGCAGGTGGAATTGAGAAGATGCTGGAAGAGTCTCCGTCAGTAGCATTGAAGCGTGAGAAGCTGAAAAAGAGCATCAACAAGCTTAAAGAATCCAAGGAGGTTGTGGGTAAGATTATGGATGGCATTATCACGTATGGTGATTAA

Protein Analysis

696

Amino Acids

77.74

Weight (kDa)

5.73

Isoelectric Point (pI)

38.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dynamin_N PF00350 89 - 263 2.4e-40 Dynamin family
Dynamin_M PF01031 270 - 554 2.7e-59 Dynamin central region
GED PF02212 597 - 686 4.3e-11 Dynamin GTPase effector domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000365)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G60500 AT1G60530
fragaria_vesca FvH4_4g34670 FvH4_7g03430 FvH4_7g03440 FvH4_7g03780
malus_domestica MD02G1282600.v1.1 MD02G1282700.v1.1 MD02G1282900.v1.1 MD14G1008400.v1.1 MD14G1008800.v1.1 MD14G1008900.v1.1 MD14G1009000.v1.1 MD14G1009200.v1.1 MD14G1009300.v1.1
prunus_persica Prupe.2G039500_v2.0.a1 Prupe.2G039600_v2.0.a1 Prupe.2G039800_v2.0.a1 Prupe.2G039900_v2.0.a1 Prupe.2G040000_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015300_v2.0.a1
pyrus_communis pycom02g24110 pycom02g24120 pycom14g00720 pycom14g00740 pycom14g00780
rosa_chinensis RchiOBHm_Chr1g0325781 RchiOBHm_Chr1g0326171 RchiOBHm_Chr1g0326211 RchiOBHm_Chr1g0327001 RchiOBHm_Chr1g0327051 RchiOBHm_Chr1g0327071 RchiOBHm_Chr1g0327091 RchiOBHm_Chr1g0327111 RchiOBHm_Chr2g0127731 RchiOBHm_Chr2g0127741 RchiOBHm_Chr4g0444021
rosa_laevigata RLG00000005864 RLG00000005866 RLG00000030044 RLG00000030045 RLG00000030047 RLG00000030048 RLG00000030083 RLG00000030106
rosa_multiflora Rmu_sc0000795.1_g000013 Rmu_sc0000795.1_g000046 Rmu_sc0000795.1_g000049 Rmu_sc0004240.1_g000005 Rmu_sc0004240.1_g000006 Rmu_sc0006009.1_g000005 Rmu_sc0015522.1_g000011 Rmu_sc0025852.1_g000001
rosa_roxburghii Rroxscaffold_4G00323340 Rroxscaffold_4G00323420 Rroxscaffold_4G00323950 Rroxscaffold_4G00324390 Rroxscaffold_5G00384590
rosa_rugosa Rorug01G0054400 Rorug01G0057700 Rorug01G0062800 Rorug01G0062900 Rorug01G0063200 Rorug01G0063300 Rorug04G0349000
rosa_samantha Rh1AG069900 Rh1AG070200 Rh1AG070400 Rh1AG070700 Rh1AG071000 Rh1AG074600 Rh1AG079800 Rh1AG080000 Rh1AG080600 Rh1BG057600 Rh1BG060000 Rh1BG064000 Rh1CG070400 Rh1CG073100 Rh1CG077500 Rh1CG077600 Rh1CG078000 Rh1CG078600 Rh1DG075100 Rh1DG079900 Rh1DG084000 Rh1DG084100 Rh1DG084400 Rh1DG084900 Rh1DG085000 Rh2BG332700 Rh4AG409800 Rh4BG420900 Rh4CG435200 Rh4DG416100
rosa_wichuraiana Rw1G005780 Rw1G005990 Rw1G006330 Rw1G006340 Rw1G006380 Rw1G006390 Rw2G026260 Rw4G035200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 371
AarI CACCTGC 1 cut(s) 1940
Acc36I ACCTGC 1 cut(s) 1940
AccB1I GGYRCC 2 cut(s) 160, 361
AccBSI CCGCTC 1 cut(s) 439
AccII CGCG 3 cut(s) 320, 339, 1774
AccIII TCCGGA 3 cut(s) 556, 799, 1630
AciI CCGC 8 cut(s) 339, 439, 498, 1372, 1674, 1772, 1774, 1810
AclWI GGATC 5 cut(s) 244, 257, 582, 1156, 1785
AcsI RAATTY 7 cut(s) 62, 999, 1063, 1173, 1190, 1360, 1413
AcuI CTGAAG 5 cut(s) 483, 1284, 1493, 1499, 1809
AcyI GRCGYC 1 cut(s) 33
AdeI CACNNNGTG 1 cut(s) 743
AfaI GTAC 2 cut(s) 1202, 1769
AfiI CCNNNNNNNGG 1 cut(s) 605
AflIII ACRYGT 1 cut(s) 1622
AgsI TTSAA 8 cut(s) 68, 383, 393, 1004, 1748, 1754, 1804, 1996
AjnI CCWGG 5 cut(s) 306, 356, 580, 1019, 1692
AleI CACNNNNGTG 2 cut(s) 359, 1278
Alw21I GWGCWC 2 cut(s) 109, 1707
Alw26I GTCTC 2 cut(s) 273, 1983
AlwI GGATC 5 cut(s) 244, 257, 582, 1156, 1785
Aor13HI TCCGGA 3 cut(s) 556, 799, 1630
ApeKI GCWGC 1 cut(s) 1873
ApoI RAATTY 7 cut(s) 62, 999, 1063, 1173, 1190, 1360, 1413
AseI ATTAAT 1 cut(s) 1931
AspS9I GGNCC 1 cut(s) 1937
AsuHPI GGTGA 3 cut(s) 580, 770, 839
AvaII GGWCC 1 cut(s) 1937
BamHI GGATCC 1 cut(s) 249
BanI GGYRCC 2 cut(s) 160, 361
BauI CACGAG 2 cut(s) 102, 1274
BbsI GAAGAC 3 cut(s) 46, 165, 1346
Bbv12I GWGCWC 2 cut(s) 109, 1707
BbvCI CCTCAGC 1 cut(s) 1116
BbvI GCAGC 1 cut(s) 1885
BccI CCATC 5 cut(s) 49, 226, 1277, 1579, 2060
BceAI ACGGC 3 cut(s) 122, 194, 1143
BcgI CGANNNNNNTGC 2 cut(s) 37, 71
BciT130I CCWGG 5 cut(s) 308, 358, 582, 1021, 1694
BclI TGATCA 2 cut(s) 645, 667
BcoDI GTCTC 2 cut(s) 273, 1983
BfaI CTAG 4 cut(s) 203, 300, 1233, 1716
BfuAI ACCTGC 1 cut(s) 1940
BisI GCNGC 1 cut(s) 1874
BlsI GCNGC 1 cut(s) 1875
Bme1390I CCNGG 5 cut(s) 308, 358, 582, 1021, 1694
Bme18I GGWCC 1 cut(s) 1937
BmgT120I GGNCC 1 cut(s) 1937
BmiI GGNNCC 5 cut(s) 162, 251, 363, 798, 1938
BmrFI CCNGG 5 cut(s) 308, 358, 582, 1021, 1694
BmsI GCATC 5 cut(s) 196, 333, 1302, 1956, 2028
BpiI GAAGAC 3 cut(s) 46, 165, 1346
BpmI CTGGAG 1 cut(s) 1715
Bpu10I CCTNAGC 1 cut(s) 1116
BsaAI YACGTR 2 cut(s) 110, 2079
BsaHI GRCGYC 1 cut(s) 33
BsaI GGTCTC 1 cut(s) 273
BsaJI CCNNGG 8 cut(s) 357, 414, 580, 960, 1684, 1772, 1857, 2040
BsaWI WCCGGW 4 cut(s) 403, 556, 799, 1630
BsaXI ACNNNNNCTCC 2 cut(s) 960, 990
Bsc4I CCNNNNNNNGG 1 cut(s) 605
Bse1I ACTGG 2 cut(s) 760, 1242
Bse3DI GCAATG 1 cut(s) 1862
BseAI TCCGGA 3 cut(s) 556, 799, 1630
BseBI CCWGG 5 cut(s) 308, 358, 582, 1021, 1694
BseDI CCNNGG 8 cut(s) 357, 414, 580, 960, 1684, 1772, 1857, 2040
BseGI GGATG 7 cut(s) 738, 931, 1471, 1587, 1705, 1818, 2071
BseLI CCNNNNNNNGG 1 cut(s) 605
BseMI GCAATG 1 cut(s) 1862
BseMII CTCAG 4 cut(s) 606, 1023, 1107, 1829
BseNI ACTGG 2 cut(s) 760, 1242
BseRI GAGGAG 2 cut(s) 908, 1200
BseXI GCAGC 1 cut(s) 1885
BsgI GTGCAG 2 cut(s) 337, 1256
Bsh1236I CGCG 3 cut(s) 320, 339, 1774
BshNI GGYRCC 2 cut(s) 160, 361
BsiHKAI GWGCWC 2 cut(s) 109, 1707
BsiSI CCGG 4 cut(s) 404, 557, 800, 1631
BslFI GGGAC 5 cut(s) 180, 819, 1240, 1466, 1950
BslI CCNNNNNNNGG 1 cut(s) 605
BsmAI GTCTC 2 cut(s) 273, 1983
BsmFI GGGAC 5 cut(s) 180, 819, 1240, 1466, 1950
Bso31I GGTCTC 1 cut(s) 273
Bsp1286I GDGCHC 2 cut(s) 109, 1707
Bsp13I TCCGGA 3 cut(s) 556, 799, 1630
Bsp19I CCATGG 3 cut(s) 960, 1684, 1857
Bsp68I TCGCGA 1 cut(s) 320
BspACI CCGC 8 cut(s) 339, 439, 498, 1372, 1674, 1772, 1774, 1810
BspCNI CTCAG 4 cut(s) 607, 1024, 1108, 1830
BspEI TCCGGA 3 cut(s) 556, 799, 1630
BspFNI CGCG 3 cut(s) 320, 339, 1774
BspLI GGNNCC 5 cut(s) 162, 251, 363, 798, 1938
BspMI ACCTGC 1 cut(s) 1940
BspPI GGATC 5 cut(s) 244, 257, 582, 1156, 1785
BspT107I GGYRCC 2 cut(s) 160, 361
BspTNI GGTCTC 1 cut(s) 273
BsrBI CCGCTC 1 cut(s) 439
BsrDI GCAATG 1 cut(s) 1862
BsrI ACTGG 2 cut(s) 760, 1242
BssECI CCNNGG 8 cut(s) 357, 414, 580, 960, 1684, 1772, 1857, 2040
BssNI GRCGYC 1 cut(s) 33
BssSI CACGAG 2 cut(s) 102, 1274
BssT1I CCWWGG 5 cut(s) 414, 960, 1684, 1857, 2040
Bst2BI CACGAG 2 cut(s) 102, 1274
Bst2UI CCWGG 5 cut(s) 308, 358, 582, 1021, 1694
Bst4CI ACNGT 2 cut(s) 52, 703
Bst6I CTCTTC 2 cut(s) 1203, 1968
BstACI GRCGYC 1 cut(s) 33
BstBAI YACGTR 2 cut(s) 110, 2079
BstC8I GCNNGC 3 cut(s) 322, 332, 496
BstDEI CTNAG 6 cut(s) 615, 1032, 1116, 1166, 1838, 1877
BstDSI CCRYGG 4 cut(s) 960, 1684, 1772, 1857
BstF5I GGATG 7 cut(s) 738, 931, 1471, 1587, 1705, 1818, 2071
BstFNI CGCG 3 cut(s) 320, 339, 1774
BstMAI GTCTC 2 cut(s) 273, 1983
BstMWI GCNNNNNNNGC 7 cut(s) 104, 336, 1127, 1532, 1771, 1873, 2005
BstNI CCWGG 5 cut(s) 308, 358, 582, 1021, 1694
BstNSI RCATGY 2 cut(s) 137, 1626
BstSCI CCNGG 5 cut(s) 306, 356, 580, 1019, 1692
BstUI CGCG 3 cut(s) 320, 339, 1774
BstV1I GCAGC 1 cut(s) 1885
BstV2I GAAGAC 3 cut(s) 46, 165, 1346
BstX2I RGATCY 3 cut(s) 249, 574, 1777
BstXI CCANNNNNNTGG 1 cut(s) 290
BstYI RGATCY 3 cut(s) 249, 574, 1777
BtgI CCRYGG 4 cut(s) 960, 1684, 1772, 1857
BtsCI GGATG 7 cut(s) 738, 931, 1471, 1587, 1705, 1818, 2071
BtsI GCAGTG 1 cut(s) 1381
BtsIMutI CAGTG 1 cut(s) 1381
BtuMI TCGCGA 1 cut(s) 320
BveI ACCTGC 1 cut(s) 1940
Cac8I GCNNGC 3 cut(s) 322, 332, 496
Cfr13I GGNCC 1 cut(s) 1937
Cfr42I CCGCGG 1 cut(s) 1775
CseI GACGC 2 cut(s) 22, 292
Csp6I GTAC 2 cut(s) 1201, 1768
CviQI GTAC 2 cut(s) 1201, 1768
DdeI CTNAG 6 cut(s) 615, 1032, 1116, 1166, 1838, 1877
DraIII CACNNNGTG 1 cut(s) 743
Eam1104I CTCTTC 2 cut(s) 1203, 1968
EarI CTCTTC 2 cut(s) 1203, 1968
EciI GGCGGA 2 cut(s) 513, 1689
Eco130I CCWWGG 5 cut(s) 414, 960, 1684, 1857, 2040
Eco31I GGTCTC 1 cut(s) 273
Eco32I GATATC 1 cut(s) 1476
Eco47I GGWCC 1 cut(s) 1937
Eco57I CTGAAG 5 cut(s) 483, 1284, 1493, 1499, 1809
EcoRII CCWGG 5 cut(s) 306, 356, 580, 1019, 1692
EcoRV GATATC 1 cut(s) 1476
EcoT14I CCWWGG 5 cut(s) 414, 960, 1684, 1857, 2040
ErhI CCWWGG 5 cut(s) 414, 960, 1684, 1857, 2040
FalI AAGNNNNNCTT 2 cut(s) 1149, 1181
FaqI GGGAC 5 cut(s) 180, 819, 1240, 1466, 1950
FauI CCCGC 3 cut(s) 1379, 1767, 1779
FbaI TGATCA 2 cut(s) 645, 667
Fnu4HI GCNGC 1 cut(s) 1874
FokI GGATG 7 cut(s) 745, 918, 1478, 1594, 1712, 1825, 2078
Fsp4HI GCNGC 1 cut(s) 1874
FspBI CTAG 4 cut(s) 203, 300, 1233, 1716
GluI GCNGC 1 cut(s) 1874
GsuI CTGGAG 1 cut(s) 1715
HapII CCGG 4 cut(s) 404, 557, 800, 1631
HgaI GACGC 2 cut(s) 22, 292
Hin1I GRCGYC 1 cut(s) 33
HincII GTYRAC 3 cut(s) 214, 790, 838
HindII GTYRAC 3 cut(s) 214, 790, 838
HindIII AAGCTT 3 cut(s) 1655, 1791, 2027
HpaII CCGG 4 cut(s) 404, 557, 800, 1631
HphI GGTGA 3 cut(s) 580, 770, 839
Hpy166II GTNNAC 6 cut(s) 214, 748, 790, 838, 1729, 1897
Hpy188III TCNNGA 8 cut(s) 291, 319, 557, 665, 800, 1039, 1309, 1631
Hpy8I GTNNAC 6 cut(s) 214, 748, 790, 838, 1729, 1897
Hpy99I CGWCG 3 cut(s) 275, 278, 1156
HpyAV CCTTC 5 cut(s) 65, 239, 1402, 1822, 1836
HpyCH4III ACNGT 2 cut(s) 52, 703
HpyCH4IV ACGT 4 cut(s) 109, 150, 1345, 2078
HpyF10VI GCNNNNNNNGC 7 cut(s) 104, 336, 1127, 1532, 1771, 1873, 2005
HpyF3I CTNAG 6 cut(s) 615, 1032, 1116, 1166, 1838, 1877
HpySE526I ACGT 4 cut(s) 109, 150, 1345, 2078
Hsp92I GRCGYC 1 cut(s) 33
Kpn2I TCCGGA 3 cut(s) 556, 799, 1630
Ksp22I TGATCA 2 cut(s) 645, 667
KspI CCGCGG 1 cut(s) 1775
LmnI GCTCC 6 cut(s) 225, 261, 406, 802, 1023, 1078
Lsp1109I GCAGC 1 cut(s) 1885
LweI GCATC 5 cut(s) 196, 333, 1302, 1956, 2028
MaeI CTAG 4 cut(s) 203, 300, 1233, 1716
MaeII ACGT 4 cut(s) 109, 150, 1345, 2078
MaeIII GTNAC 6 cut(s) 224, 735, 778, 820, 1639, 1921
MbiI CCGCTC 1 cut(s) 439
MflI RGATCY 3 cut(s) 249, 574, 1777
MhlI GDGCHC 2 cut(s) 109, 1707
MlyI GAGTC 4 cut(s) 760, 1360, 1698, 1985
MmeI TCCRAC 2 cut(s) 256, 946
MroI TCCGGA 3 cut(s) 556, 799, 1630
MseI TTAA 9 cut(s) 474, 527, 563, 1251, 1484, 1575, 1931, 2031, 2089
MslI CAYNNNNRTG 4 cut(s) 359, 1221, 1278, 1910
MspA1I CMGCKG 1 cut(s) 1774
MspI CCGG 4 cut(s) 404, 557, 800, 1631
MspR9I CCNGG 5 cut(s) 308, 358, 582, 1021, 1694
MvaI CCWGG 5 cut(s) 308, 358, 582, 1021, 1694
MvnI CGCG 3 cut(s) 320, 339, 1774
MwoI GCNNNNNNNGC 7 cut(s) 104, 336, 1127, 1532, 1771, 1873, 2005
NcoI CCATGG 3 cut(s) 960, 1684, 1857
NlaIV GGNNCC 5 cut(s) 162, 251, 363, 798, 1938
NmuCI GTSAC 1 cut(s) 735
NruI TCGCGA 1 cut(s) 320
NspI RCATGY 2 cut(s) 137, 1626
OliI CACNNNNGTG 2 cut(s) 359, 1278
PaqCI CACCTGC 1 cut(s) 1940
PciI ACATGT 1 cut(s) 1622
PcsI WCGNNNNNNNCGW 1 cut(s) 1424
PfeI GAWTC 7 cut(s) 311, 585, 722, 1160, 1429, 1853, 2036
PfoI TCCNGGA 2 cut(s) 306, 1692
PkrI GCNGC 1 cut(s) 1875
PleI GAGTC 4 cut(s) 760, 1359, 1697, 1984
PpsI GAGTC 4 cut(s) 760, 1359, 1697, 1984
Ppu21I YACGTR 2 cut(s) 110, 2079
PscI ACATGT 1 cut(s) 1622
PshBI ATTAAT 1 cut(s) 1931
PsiI TTATAA 1 cut(s) 371
Psp6I CCWGG 5 cut(s) 306, 356, 580, 1019, 1692
PspGI CCWGG 5 cut(s) 306, 356, 580, 1019, 1692
PspN4I GGNNCC 5 cut(s) 162, 251, 363, 798, 1938
PspPI GGNCC 1 cut(s) 1937
PsuI RGATCY 3 cut(s) 249, 574, 1777
RruI TCGCGA 1 cut(s) 320
RsaI GTAC 2 cut(s) 1202, 1769
RsaNI GTAC 2 cut(s) 1201, 1768
RseI CAYNNNNRTG 4 cut(s) 359, 1221, 1278, 1910
SacII CCGCGG 1 cut(s) 1775
SaqAI TTAA 9 cut(s) 474, 527, 563, 1251, 1484, 1575, 1931, 2031, 2089
SatI GCNGC 1 cut(s) 1874
Sau96I GGNCC 1 cut(s) 1937
SchI GAGTC 4 cut(s) 760, 1360, 1698, 1985
ScrFI CCNGG 5 cut(s) 308, 358, 582, 1021, 1694
SduI GDGCHC 2 cut(s) 109, 1707
SfaNI GCATC 5 cut(s) 196, 333, 1302, 1956, 2028
Sfr303I CCGCGG 1 cut(s) 1775
SgrBI CCGCGG 1 cut(s) 1775
SinI GGWCC 1 cut(s) 1937
SmiMI CAYNNNNRTG 4 cut(s) 359, 1221, 1278, 1910
SsiI CCGC 8 cut(s) 339, 439, 498, 1372, 1674, 1772, 1774, 1810
SspMI CTAG 4 cut(s) 203, 300, 1233, 1716
StyD4I CCNGG 5 cut(s) 306, 356, 580, 1019, 1692
StyI CCWWGG 5 cut(s) 414, 960, 1684, 1857, 2040
TaaI ACNGT 2 cut(s) 52, 703
TaiI ACGT 4 cut(s) 112, 153, 1348, 2081
TaqI TCGA 4 cut(s) 705, 1154, 1418, 1432
TaqII GACCGA 1 cut(s) 1954
TfiI GAWTC 7 cut(s) 311, 585, 722, 1160, 1429, 1853, 2036
Tru1I TTAA 9 cut(s) 474, 527, 563, 1251, 1484, 1575, 1931, 2031, 2089
Tru9I TTAA 9 cut(s) 474, 527, 563, 1251, 1484, 1575, 1931, 2031, 2089
TscAI CASTG 1 cut(s) 1381
TseFI GTSAC 1 cut(s) 735
TseI GCWGC 1 cut(s) 1873
Tsp45I GTSAC 1 cut(s) 735
TspGWI ACGGA 3 cut(s) 182, 212, 1971
TspRI CASTG 1 cut(s) 1381
VpaK11BI GGWCC 1 cut(s) 1937
VspI ATTAAT 1 cut(s) 1931
XapI RAATTY 7 cut(s) 62, 999, 1063, 1173, 1190, 1360, 1413
XceI RCATGY 2 cut(s) 137, 1626
XcmI CCANNNNNNNNNTGG 1 cut(s) 2047
XspI CTAG 4 cut(s) 203, 300, 1233, 1716
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.