Rh4DG416100
ERF Family

Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin Fzo YdjA family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Forward (+)
62562738 .. 62565346
2609 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG416100.1

Sequence Viewer

Length: 2064 bp
ATGGGGGGAGGGGCAAAGCAAACTGCTTCAAAAAGCACCGCCAGCAAAAGCAAGTCAAGCGCTGCAATCCCAAACGTACTAGGAAATTCATCCTTGGCCATAGTAGAACAGCAAGATGTGGTACCTCTCGCTATCAACGCACCGATTGTGTCGTCTTACAACGACAAAATTCGTCCTCTCCTTGATGCAGTGGACAAGCTTCGGAACCTGATGGTTATGGATGAAGGCATCCAGCTCCCAACAATCGTTGTAGTAGGAGACCAGTCCTCTGGAAAGTCAAGCGTCCTTGAATCTCTGGCCGGCATCAACCTGCCACGTGGCCAAGGCATCTGCACCAGGGTGCCACTCATTATGAGGCTGCAGCACCATGCCAGTGTGGAGCCGGAGCTGTCGTTGGAATACAATGGCAGAGTGGACCGCACCAATGAAGACAACATATCTGAAGACATTGTGAAGGCAACTAGTGTCATCGCTGGAGGCGGTAAGGGAATTTCCAATACCCCATTGACATTGCTAGTGAAGAAGAATGGGGTACCGGATTTGACCATGGTGGATCTTCCGGGAATCACTAGAGTTCCGGTTCATGGCCAGCCTGAAAATATCTATGACCAGATAAGAGACATGATTATGGAGTATATCAAGCCGGAAGAGAGCATTATTCTGAATGTTCTGTCTGCAAGTGTTGATTTTACCACTTGTGAATCGATTAGGATGTCGCAGAGCGTGGATAAGACTGGTGAGAGGACACTTGCTGTGGTCACTAAGGTTGACAAGGCTCCGGAGGGACTGTTAGAGAAGGTCACGGCTGATGATGTCAACATTGGACTTGGCTATGTCTGTGTGAGGAACAGAATTGGAGATGAGACTTATGAGGAGGCGAGTGCTATTGCTCACGAGCTGTTTCAAACACATCCTCTTCTTTCCAAGATTGACAAATCTATTGTTGGCATTCCAGTTTTAGCTCAAAAGCTGGTTCAGATTCAAGCTACTAGTATAGCAAGGAATTTGCCGGAAATTGTGAAGAAGATCAATGACAGACTCAATGCTTGCCTTTCCGAGCTGAACAAAATGCCGAAAAGTCTCTCATCTATTGCTGAGGCAATGACGGCTTTTATGCAGATCCTTGGATGTGCAAAGGAGTCACTCAGGAAAATTCTTCTGAGAGGCGAATTTGATGAGTATTCTGATGATAGAAGGATGCACTGCACAGCTCGGTTGGTTGAGATGGTCAATCAATACTCCGATGATCTTTATAAGTGTGCGGAGAGCGACCCCAAGGTCAAGTTTTTGATGGATGAGATCAAGATTTTGGAAGAAGCCAAAGGTATTGCGCTTCCGAATTTTCTTCCTCGCAATGCTTTTCTTTTAATCTTGCAATCAAAAGTGAGGGAGATTTCGAGCATACCTATTGGATTTGTAGATCAAGTCTGGAGTTACATTGAGGATGTTGTAATATCAGTCTTGATGAAACACTCGGAAAATTACTACCAGCTTCAGTTGTCTGCCAGAAGAGCTGGTCATAATCTGATGGCTAAGATGAAGGATAGGTCCATTAGGTGGATGATGGAGATTGTTGAAATGGAGAAGCTTACTGACTATACATGTGATCCTGAATATGTTGCTGAATGGAATAAGTTGATGGCTCAGCAGGAAGCATTTATGAATGGGGTTCTGCATGATGAGAAACGGCCTTCTACTATAGCTATACAGGGTATTGGGGAGGTTGGGGTTGAAGTCCTTAGGCATTACCCTCATGTTCTTGCTCAGGCTTTTGACCTGAAGATGAGGATGACTGCTTATTGGAAAGTTGTGCTGAGGAGGTTCGTTGATTGTATGGCACTGCATTTGCAGTTGTCTGTTTCAAATCTGGTGAACAAAGAGATGGAAGTTGAGATTGTTAATGAGTTGATGGGGCCATATGGTGGTGGAATTGAGAGGATGCTTGAGGAGTCACCGGCTGTGGCCGTTAAACGTGAGAAACTGAACAAGAGTATCAAGAAGCTGAGGGACTCGAAGGAGGTTGTGGCCAAGATTATGGACGGCATCATTAGCTATGGTGATTAA

Protein Analysis

687

Amino Acids

76.35

Weight (kDa)

5.81

Isoelectric Point (pI)

42.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Dynamin_N PF00350 82 - 256 6.1e-42 Dynamin family
Dynamin_M PF01031 263 - 547 4.2e-61 Dynamin central region
GED PF02212 589 - 677 1e-08 Dynamin GTPase effector domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000365)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G60500 AT1G60530
fragaria_vesca FvH4_4g34670 FvH4_7g03430 FvH4_7g03440 FvH4_7g03780
malus_domestica MD02G1282600.v1.1 MD02G1282700.v1.1 MD02G1282900.v1.1 MD14G1008400.v1.1 MD14G1008800.v1.1 MD14G1008900.v1.1 MD14G1009000.v1.1 MD14G1009200.v1.1 MD14G1009300.v1.1
prunus_persica Prupe.2G039500_v2.0.a1 Prupe.2G039600_v2.0.a1 Prupe.2G039800_v2.0.a1 Prupe.2G039900_v2.0.a1 Prupe.2G040000_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015300_v2.0.a1
pyrus_communis pycom02g24110 pycom02g24120 pycom14g00720 pycom14g00740 pycom14g00780
rosa_chinensis RchiOBHm_Chr1g0325781 RchiOBHm_Chr1g0326171 RchiOBHm_Chr1g0326211 RchiOBHm_Chr1g0327001 RchiOBHm_Chr1g0327051 RchiOBHm_Chr1g0327071 RchiOBHm_Chr1g0327091 RchiOBHm_Chr1g0327111 RchiOBHm_Chr2g0127731 RchiOBHm_Chr2g0127741 RchiOBHm_Chr4g0444021
rosa_laevigata RLG00000005864 RLG00000005866 RLG00000030044 RLG00000030045 RLG00000030047 RLG00000030048 RLG00000030083 RLG00000030106
rosa_multiflora Rmu_sc0000795.1_g000013 Rmu_sc0000795.1_g000046 Rmu_sc0000795.1_g000049 Rmu_sc0004240.1_g000005 Rmu_sc0004240.1_g000006 Rmu_sc0006009.1_g000005 Rmu_sc0015522.1_g000011 Rmu_sc0025852.1_g000001
rosa_roxburghii Rroxscaffold_4G00323340 Rroxscaffold_4G00323420 Rroxscaffold_4G00323950 Rroxscaffold_4G00324390 Rroxscaffold_5G00384590
rosa_rugosa Rorug01G0054400 Rorug01G0057700 Rorug01G0062800 Rorug01G0062900 Rorug01G0063200 Rorug01G0063300 Rorug04G0349000
rosa_samantha Rh1AG069900 Rh1AG070200 Rh1AG070400 Rh1AG070700 Rh1AG071000 Rh1AG074600 Rh1AG079800 Rh1AG080000 Rh1AG080600 Rh1BG057600 Rh1BG060000 Rh1BG064000 Rh1CG070400 Rh1CG073100 Rh1CG077500 Rh1CG077600 Rh1CG078000 Rh1CG078600 Rh1DG075100 Rh1DG079900 Rh1DG084000 Rh1DG084100 Rh1DG084400 Rh1DG084900 Rh1DG085000 Rh2BG332700 Rh4AG409800 Rh4BG420900 Rh4CG435200 Rh4DG416100
rosa_wichuraiana Rw1G005780 Rw1G005990 Rw1G006330 Rw1G006340 Rw1G006380 Rw1G006390 Rw2G026260 Rw4G035200

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1254
AasI GACNNNNNNGTC 1 cut(s) 1277
Acc36I ACCTGC 1 cut(s) 318
Acc65I GGTACC 2 cut(s) 121, 532
AccB1I GGYRCC 3 cut(s) 121, 340, 532
AccB7I CCANNNNNTGG 2 cut(s) 1557, 1922
AccIII TCCGGA 1 cut(s) 778
AciI CCGC 4 cut(s) 39, 418, 480, 1262
AclWI GGATC 3 cut(s) 561, 1114, 1601
AcoI YGGCCR 6 cut(s) 96, 297, 319, 586, 1962, 2025
AcsI RAATTY 7 cut(s) 85, 168, 489, 1003, 1152, 1169, 1339
AcuI CTGAAG 3 cut(s) 462, 1478, 1799
AcvI CACGTG 1 cut(s) 317
AfaI GTAC 3 cut(s) 78, 123, 534
AfeI AGCGCT 1 cut(s) 61
AfiI CCNNNNNNNGG 3 cut(s) 584, 1557, 1922
AflIII ACRYGT 1 cut(s) 1601
AgsI TTSAA 7 cut(s) 30, 290, 905, 983, 1577, 1733, 1863
AhlI ACTAGT 2 cut(s) 461, 989
AjnI CCWGG 1 cut(s) 335
AleI CACNNNNGTG 1 cut(s) 338
Alw26I GTCTC 4 cut(s) 252, 612, 857, 1085
AlwI GGATC 3 cut(s) 561, 1114, 1601
Aor13HI TCCGGA 1 cut(s) 778
Aor51HI AGCGCT 1 cut(s) 61
AoxI GGCC 8 cut(s) 96, 297, 319, 586, 1688, 1913, 1962, 2025
ApeKI GCWGC 3 cut(s) 62, 358, 361
ApoI RAATTY 7 cut(s) 85, 168, 489, 1003, 1152, 1169, 1339
Asp718I GGTACC 2 cut(s) 121, 532
AspLEI GCGC 2 cut(s) 62, 1333
AspS9I GGNCC 3 cut(s) 415, 1548, 1913
AsuC2I CCSGG 1 cut(s) 561
AsuHPI GGTGA 3 cut(s) 749, 1882, 1944
AvaII GGWCC 2 cut(s) 415, 1548
AxyI CCTNAGG 1 cut(s) 1739
BaeI ACNNNNGTAYC 2 cut(s) 1975, 2008
BalI TGGCCA 4 cut(s) 98, 321, 588, 2027
BanI GGYRCC 3 cut(s) 121, 340, 532
BauI CACGAG 1 cut(s) 893
BbrPI CACGTG 1 cut(s) 317
BbsI GAAGAC 2 cut(s) 435, 450
BbvCI CCTCAGC 3 cut(s) 1095, 1814, 2003
BbvI GCAGC 3 cut(s) 49, 345, 373
BccI CCATC 8 cut(s) 205, 1219, 1285, 1522, 1558, 1633, 1876, 1903
BceAI ACGGC 5 cut(s) 819, 1122, 1703, 1949, 2056
BciT130I CCWGG 1 cut(s) 337
BcnI CCSGG 1 cut(s) 561
BcoDI GTCTC 4 cut(s) 252, 612, 857, 1085
BcuI ACTAGT 2 cut(s) 461, 989
BfaI CTAG 5 cut(s) 80, 462, 515, 570, 990
BfmI CTRYAG 2 cut(s) 359, 1698
BfoI RGCGCY 1 cut(s) 63
BfuAI ACCTGC 1 cut(s) 318
BisI GCNGC 3 cut(s) 63, 359, 362
BlpI GCTNAGC 1 cut(s) 1644
BlsI GCNGC 3 cut(s) 64, 360, 363
Bme1390I CCNGG 2 cut(s) 337, 561
Bme18I GGWCC 2 cut(s) 415, 1548
BmgT120I GGNCC 3 cut(s) 415, 1548, 1913
BmiI GGNNCC 7 cut(s) 123, 206, 342, 381, 534, 777, 1914
BmrFI CCNGG 2 cut(s) 337, 561
BmsI GCATC 7 cut(s) 175, 237, 312, 336, 1188, 1929, 2052
BpiI GAAGAC 2 cut(s) 435, 450
BpmI CTGGAG 2 cut(s) 495, 1450
Bpu10I CCTNAGC 4 cut(s) 1095, 1764, 1814, 2003
Bpu1102I GCTNAGC 1 cut(s) 1644
BpuEI CTTGAG 1 cut(s) 1964
BpuMI CCSGG 1 cut(s) 561
Bsa29I ATCGAT 1 cut(s) 704
BsaAI YACGTR 1 cut(s) 317
BsaI GGTCTC 1 cut(s) 252
BsaJI CCNNGG 6 cut(s) 93, 322, 336, 546, 1123, 1275
BsaWI WCCGGW 3 cut(s) 535, 577, 778
BsaXI ACNNNNNCTCC 4 cut(s) 377, 407, 773, 803
Bsc4I CCNNNNNNNGG 3 cut(s) 584, 1557, 1922
Bse118I RCCGGY 2 cut(s) 299, 1954
Bse1I ACTGG 4 cut(s) 262, 372, 739, 953
Bse21I CCTNAGG 1 cut(s) 1739
Bse3DI GCAATG 3 cut(s) 509, 1107, 1360
BseAI TCCGGA 1 cut(s) 778
BseBI CCWGG 1 cut(s) 337
BseCI ATCGAT 1 cut(s) 704
BseDI CCNNGG 6 cut(s) 93, 322, 336, 546, 1123, 1275
BseLI CCNNNNNNNGG 3 cut(s) 584, 1557, 1922
BseMI GCAATG 3 cut(s) 509, 1107, 1360
BseMII CTCAG 7 cut(s) 1086, 1151, 1159, 1658, 1778, 1805, 1994
BseNI ACTGG 4 cut(s) 262, 372, 739, 953
BseRI GAGGAG 3 cut(s) 887, 1831, 1961
BseXI GCAGC 3 cut(s) 49, 345, 373
BsgI GTGCAG 2 cut(s) 316, 1189
BshFI GGCC 8 cut(s) 98, 299, 321, 588, 1690, 1915, 1964, 2027
BshNI GGYRCC 3 cut(s) 121, 340, 532
BshVI ATCGAT 1 cut(s) 704
BsiSI CCGG 9 cut(s) 300, 383, 536, 560, 578, 644, 779, 1010, 1955
BslFI GGGAC 2 cut(s) 798, 2021
BslI CCNNNNNNNGG 3 cut(s) 584, 1557, 1922
BsmAI GTCTC 4 cut(s) 252, 612, 857, 1085
BsmFI GGGAC 2 cut(s) 798, 2021
BsmI GAATGC 1 cut(s) 948
BsnI GGCC 8 cut(s) 98, 299, 321, 588, 1690, 1915, 1964, 2027
Bso31I GGTCTC 1 cut(s) 252
Bsp13I TCCGGA 1 cut(s) 778
Bsp143I GATC 7 cut(s) 553, 1026, 1119, 1246, 1299, 1420, 1606
Bsp1720I GCTNAGC 1 cut(s) 1644
Bsp19I CCATGG 1 cut(s) 546
BspACI CCGC 4 cut(s) 39, 418, 480, 1262
BspANI GGCC 8 cut(s) 98, 299, 321, 588, 1690, 1915, 1964, 2027
BspCNI CTCAG 7 cut(s) 1087, 1152, 1158, 1657, 1777, 1806, 1995
BspDI ATCGAT 1 cut(s) 704
BspEI TCCGGA 1 cut(s) 778
BspLI GGNNCC 7 cut(s) 123, 206, 342, 381, 534, 777, 1914
BspMAI CTGCAG 1 cut(s) 363
BspMI ACCTGC 1 cut(s) 318
BspPI GGATC 3 cut(s) 561, 1114, 1601
BspQI GCTCTTC 1 cut(s) 1504
BspT107I GGYRCC 3 cut(s) 121, 340, 532
BspTNI GGTCTC 1 cut(s) 252
BsrDI GCAATG 3 cut(s) 509, 1107, 1360
BsrFI RCCGGY 2 cut(s) 299, 1954
BsrI ACTGG 4 cut(s) 262, 372, 739, 953
BssAI RCCGGY 2 cut(s) 299, 1954
BssECI CCNNGG 6 cut(s) 93, 322, 336, 546, 1123, 1275
BssMI GATC 7 cut(s) 553, 1026, 1119, 1246, 1299, 1420, 1606
BssSI CACGAG 1 cut(s) 893
BssT1I CCWWGG 5 cut(s) 93, 322, 546, 1123, 1275
Bst2BI CACGAG 1 cut(s) 893
Bst2UI CCWGG 1 cut(s) 337
Bst4CI ACNGT 1 cut(s) 789
Bst6I CTCTTC 3 cut(s) 642, 921, 1504
BstBAI YACGTR 1 cut(s) 317
BstC8I GCNNGC 4 cut(s) 43, 301, 590, 1048
BstDSI CCRYGG 1 cut(s) 546
BstH2I RGCGCY 1 cut(s) 63
BstHHI GCGC 2 cut(s) 62, 1333
BstKTI GATC 7 cut(s) 556, 1029, 1122, 1249, 1302, 1423, 1609
BstMAI GTCTC 4 cut(s) 252, 612, 857, 1085
BstMBI GATC 7 cut(s) 553, 1026, 1119, 1246, 1299, 1420, 1606
BstMWI GCNNNNNNNGC 6 cut(s) 42, 57, 137, 1106, 1511, 2049
BstNI CCWGG 1 cut(s) 337
BstNSI RCATGY 1 cut(s) 1605
BstSCI CCNGG 2 cut(s) 335, 559
BstSFI CTRYAG 2 cut(s) 359, 1698
BstV1I GCAGC 3 cut(s) 49, 345, 373
BstV2I GAAGAC 2 cut(s) 435, 450
BstX2I RGATCY 2 cut(s) 553, 1119
BstXI CCANNNNNNTGG 2 cut(s) 269, 2035
BstYI RGATCY 2 cut(s) 553, 1119
Bsu15I ATCGAT 1 cut(s) 704
Bsu36I CCTNAGG 1 cut(s) 1739
BsuRI GGCC 8 cut(s) 98, 299, 321, 588, 1690, 1915, 1964, 2027
BsuTUI ATCGAT 1 cut(s) 704
BtgI CCRYGG 1 cut(s) 546
BtgZI GCGATG 1 cut(s) 454
BtsI GCAGTG 3 cut(s) 195, 1201, 1838
BtsIMutI CAGTG 4 cut(s) 195, 379, 1201, 1838
BveI ACCTGC 1 cut(s) 318
Cac8I GCNNGC 4 cut(s) 43, 301, 590, 1048
CfoI GCGC 2 cut(s) 62, 1333
Cfr10I RCCGGY 2 cut(s) 299, 1954
Cfr13I GGNCC 3 cut(s) 415, 1548, 1913
ClaI ATCGAT 1 cut(s) 704
CseI GACGC 1 cut(s) 271
Csp6I GTAC 3 cut(s) 77, 122, 533
CviAII CATG 7 cut(s) 368, 547, 584, 622, 1602, 1676, 1754
CviQI GTAC 3 cut(s) 77, 122, 533
DpnI GATC 7 cut(s) 555, 1028, 1121, 1248, 1301, 1422, 1608
DpnII GATC 7 cut(s) 553, 1026, 1119, 1246, 1299, 1420, 1606
DrdI GACNNNNNNGTC 1 cut(s) 1277
DseDI GACNNNNNNGTC 1 cut(s) 1277
EaeI YGGCCR 6 cut(s) 96, 297, 319, 586, 1962, 2025
Eam1104I CTCTTC 3 cut(s) 642, 921, 1504
EarI CTCTTC 3 cut(s) 642, 921, 1504
Eco130I CCWWGG 5 cut(s) 93, 322, 546, 1123, 1275
Eco31I GGTCTC 1 cut(s) 252
Eco47I GGWCC 2 cut(s) 415, 1548
Eco47III AGCGCT 1 cut(s) 61
Eco57I CTGAAG 3 cut(s) 462, 1478, 1799
Eco72I CACGTG 1 cut(s) 317
Eco81I CCTNAGG 1 cut(s) 1739
EcoRII CCWGG 1 cut(s) 335
EcoT14I CCWWGG 5 cut(s) 93, 322, 546, 1123, 1275
ErhI CCWWGG 5 cut(s) 93, 322, 546, 1123, 1275
FaeI CATG 7 cut(s) 371, 550, 587, 625, 1605, 1679, 1757
FaqI GGGAC 2 cut(s) 798, 2021
FatI CATG 7 cut(s) 367, 546, 583, 621, 1601, 1675, 1753
FauNDI CATATG 1 cut(s) 1918
Fnu4HI GCNGC 3 cut(s) 63, 359, 362
Fsp4HI GCNGC 3 cut(s) 63, 359, 362
FspBI CTAG 5 cut(s) 80, 462, 515, 570, 990
GlaI GCGC 2 cut(s) 61, 1332
GluI GCNGC 3 cut(s) 63, 359, 362
GsuI CTGGAG 2 cut(s) 495, 1450
HaeII RGCGCY 1 cut(s) 63
HaeIII GGCC 8 cut(s) 98, 299, 321, 588, 1690, 1915, 1964, 2027
HapII CCGG 9 cut(s) 300, 383, 536, 560, 578, 644, 779, 1010, 1955
HgaI GACGC 1 cut(s) 271
HhaI GCGC 2 cut(s) 62, 1333
Hin1II CATG 7 cut(s) 371, 550, 587, 625, 1605, 1679, 1757
Hin6I GCGC 2 cut(s) 60, 1331
HinP1I GCGC 2 cut(s) 60, 1331
HincII GTYRAC 2 cut(s) 769, 817
HindII GTYRAC 2 cut(s) 769, 817
HindIII AAGCTT 2 cut(s) 197, 1586
HinfI GANTC 8 cut(s) 290, 564, 701, 979, 1038, 1139, 1949, 2009
HpaII CCGG 9 cut(s) 300, 383, 536, 560, 578, 644, 779, 1010, 1955
HphI GGTGA 3 cut(s) 749, 1882, 1944
Hpy166II GTNNAC 5 cut(s) 193, 415, 769, 817, 1873
Hpy188III TCNNGA 9 cut(s) 270, 779, 893, 1147, 1303, 1429, 1462, 1610, 1996
Hpy8I GTNNAC 5 cut(s) 193, 415, 769, 817, 1873
HpyAV CCTTC 7 cut(s) 218, 448, 790, 1188, 1534, 1701, 2008
HpyCH4III ACNGT 1 cut(s) 789
HpyCH4IV ACGT 3 cut(s) 75, 316, 1972
HpyF10VI GCNNNNNNNGC 6 cut(s) 42, 57, 137, 1106, 1511, 2049
HpySE526I ACGT 3 cut(s) 75, 316, 1972
Hsp92II CATG 7 cut(s) 371, 550, 587, 625, 1605, 1679, 1757
HspAI GCGC 2 cut(s) 60, 1331
Kpn2I TCCGGA 1 cut(s) 778
KpnI GGTACC 2 cut(s) 125, 536
KroI GCCGGC 1 cut(s) 299
KroNI GCCGGC 1 cut(s) 301
Kzo9I GATC 7 cut(s) 553, 1026, 1119, 1246, 1299, 1420, 1606
LguI GCTCTTC 1 cut(s) 1504
LmnI GCTCC 4 cut(s) 240, 379, 385, 781
Lsp1109I GCAGC 3 cut(s) 49, 345, 373
LweI GCATC 7 cut(s) 175, 237, 312, 336, 1188, 1929, 2052
MaeI CTAG 5 cut(s) 80, 462, 515, 570, 990
MaeII ACGT 3 cut(s) 75, 316, 1972
MaeIII GTNAC 5 cut(s) 757, 799, 1140, 1433, 1950
MalI GATC 7 cut(s) 555, 1028, 1121, 1248, 1301, 1422, 1608
MboI GATC 7 cut(s) 553, 1026, 1119, 1246, 1299, 1420, 1606
MflI RGATCY 2 cut(s) 553, 1119
MlsI TGGCCA 4 cut(s) 98, 321, 588, 2027
MluNI TGGCCA 4 cut(s) 98, 321, 588, 2027
MlyI GAGTC 4 cut(s) 1032, 1148, 1958, 2003
MmeI TCCRAC 1 cut(s) 375
Mox20I TGGCCA 4 cut(s) 98, 321, 588, 2027
MroI TCCGGA 1 cut(s) 778
MroNI GCCGGC 1 cut(s) 299
MscI TGGCCA 4 cut(s) 98, 321, 588, 2027
MseI TTAA 4 cut(s) 1367, 1899, 1968, 2062
MslI CAYNNNNRTG 3 cut(s) 338, 372, 626
Msp20I TGGCCA 4 cut(s) 98, 321, 588, 2027
MspI CCGG 9 cut(s) 300, 383, 536, 560, 578, 644, 779, 1010, 1955
MspR9I CCNGG 2 cut(s) 337, 561
Mva1269I GAATGC 1 cut(s) 948
MvaI CCWGG 1 cut(s) 337
MwoI GCNNNNNNNGC 6 cut(s) 42, 57, 137, 1106, 1511, 2049
NaeI GCCGGC 1 cut(s) 301
NciI CCSGG 1 cut(s) 561
NcoI CCATGG 1 cut(s) 546
NdeI CATATG 1 cut(s) 1918
NdeII GATC 7 cut(s) 553, 1026, 1119, 1246, 1299, 1420, 1606
NgoMIV GCCGGC 1 cut(s) 299
NlaIII CATG 7 cut(s) 371, 550, 587, 625, 1605, 1679, 1757
NlaIV GGNNCC 7 cut(s) 123, 206, 342, 381, 534, 777, 1914
NmuCI GTSAC 4 cut(s) 757, 799, 1140, 1950
NspI RCATGY 1 cut(s) 1605
OliI CACNNNNGTG 1 cut(s) 338
PciI ACATGT 1 cut(s) 1601
PciSI GCTCTTC 1 cut(s) 1504
PctI GAATGC 1 cut(s) 948
PdiI GCCGGC 1 cut(s) 301
PfeI GAWTC 4 cut(s) 290, 564, 701, 979
PflMI CCANNNNNTGG 2 cut(s) 1557, 1922
PfoI TCCNGGA 1 cut(s) 559
PkrI GCNGC 3 cut(s) 64, 360, 363
PleI GAGTC 4 cut(s) 1032, 1147, 1957, 2003
PmaCI CACGTG 1 cut(s) 317
PmlI CACGTG 1 cut(s) 317
PpsI GAGTC 4 cut(s) 1032, 1147, 1957, 2003
Ppu21I YACGTR 1 cut(s) 317
PscI ACATGT 1 cut(s) 1601
PsiI TTATAA 1 cut(s) 1254
Psp6I CCWGG 1 cut(s) 335
PspCI CACGTG 1 cut(s) 317
PspGI CCWGG 1 cut(s) 335
PspN4I GGNNCC 7 cut(s) 123, 206, 342, 381, 534, 777, 1914
PspPI GGNCC 3 cut(s) 415, 1548, 1913
PstI CTGCAG 1 cut(s) 363
PsuI RGATCY 2 cut(s) 553, 1119
RsaI GTAC 3 cut(s) 78, 123, 534
RsaNI GTAC 3 cut(s) 77, 122, 533
RseI CAYNNNNRTG 3 cut(s) 338, 372, 626
SapI GCTCTTC 1 cut(s) 1504
SaqAI TTAA 4 cut(s) 1367, 1899, 1968, 2062
SatI GCNGC 3 cut(s) 63, 359, 362
Sau3AI GATC 7 cut(s) 553, 1026, 1119, 1246, 1299, 1420, 1606
Sau96I GGNCC 3 cut(s) 415, 1548, 1913
SchI GAGTC 4 cut(s) 1032, 1148, 1958, 2003
ScrFI CCNGG 2 cut(s) 337, 561
SfaNI GCATC 7 cut(s) 175, 237, 312, 336, 1188, 1929, 2052
SfcI CTRYAG 2 cut(s) 359, 1698
SinI GGWCC 2 cut(s) 415, 1548
SmiMI CAYNNNNRTG 3 cut(s) 338, 372, 626
SmlI CTYRAG 1 cut(s) 1943
SmoI CTYRAG 1 cut(s) 1943
SpeI ACTAGT 2 cut(s) 461, 989
SsiI CCGC 4 cut(s) 39, 418, 480, 1262
SspMI CTAG 5 cut(s) 80, 462, 515, 570, 990
StyD4I CCNGG 2 cut(s) 335, 559
StyI CCWWGG 5 cut(s) 93, 322, 546, 1123, 1275
TaaI ACNGT 1 cut(s) 789
TaiI ACGT 3 cut(s) 78, 319, 1975
TaqI TCGA 3 cut(s) 704, 1397, 2012
TfiI GAWTC 4 cut(s) 290, 564, 701, 979
Tru1I TTAA 4 cut(s) 1367, 1899, 1968, 2062
Tru9I TTAA 4 cut(s) 1367, 1899, 1968, 2062
TscAI CASTG 4 cut(s) 195, 379, 1208, 1845
TseFI GTSAC 4 cut(s) 757, 799, 1140, 1950
TseI GCWGC 3 cut(s) 62, 358, 361
Tsp45I GTSAC 4 cut(s) 757, 799, 1140, 1950
TspDTI ATGAA 7 cut(s) 78, 237, 441, 572, 1481, 1553, 1676
TspRI CASTG 4 cut(s) 195, 379, 1208, 1845
Van91I CCANNNNNTGG 2 cut(s) 1557, 1922
VpaK11BI GGWCC 2 cut(s) 415, 1548
XapI RAATTY 7 cut(s) 85, 168, 489, 1003, 1152, 1169, 1339
XceI RCATGY 1 cut(s) 1605
XspI CTAG 5 cut(s) 80, 462, 515, 570, 990
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.