Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0000365

Physical Location & Seq

Genomic Coordinates Forward (+)

62009078 .. 62011141

Gene Structure 2064 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G035200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

ATGGGAGGAGGGGCAAAGCACACTTCAACCGCTGCAATCCCAAACGTACTAGGAAATTCATCCTTGGCCATAGTAGAACAGCAAGATGTGGTACCTCTCGCCATCAACGCACCGATTGTGTCGTCTTACAACGACAAAATCCGTCCTCTCCTTGATGCAGTGGACAAGCTTCGGAACCTGATGGTTATGGATGAAGGGATCCAGCTCCCAACAATCGTTGTAGTAGGAGACCAGTCCTCTGGAAAGTCAAGCGTCCTTGAATCTCTGGCCTGCATCAACCTGCCACGTGGCCAAGGCATCTGCACCAGGGTGCCACTCATTATGAGGCTGCAGCACCATGCAAGTGTGGAGCCGGAGCTGTCGTTGGAATACAATGGCAGAGTGGACCGCACCAATGAAGACAACATATCTGAAGACATTGTGAAGGCAACTAGTGTCATCGCTGGAGGCGGTAAGGGAATTTCCAATACCCCATTGACATTGCTAGTGAAGAAGAATGGGGTACCGGATTTGACCATGGTGGATCTTCCGGGAATCACTAGAGTTCCGGTTCATGGCCAGCCTGAAAATATCTATGACCAGATAAGAGACATGATCATGGAGTATATCAAGCCGGAAGAGAGCATTATTCTGAATGTTCTGTCTGCAAGTGTTGATTTTACCACTTGTGAATCGATTAGGATGTCGCAGAGCGTGGATAAGACTGGTGAGAGGACACTTGCTGTGGTCACTAAGGTTGACAAGGCTCCGGAGGGACTGTTAGAGAAGGTCACGGCTGATGATGTCAACATTGGACTTGGCTATGTCTGTGTGAGGAACAGAATTGGAGACGAGACTTATGAGGAGGCGAGTGCTATTGCTCACGAGCTGTTTCAAACACATCCTCTTCTTTCCAAGATTGATAAATCTATTGTTGACATTCCAGTTTTAGCTCAAAAGCTGGTTCAGATTCAAGCTACTAGTATAGCAAGGAATTTGCCGGAAATTGTGAAGAAGATCAATGACAGACTCAATGCTTGCCTTTCCGAGCTGAACAAAATGCCGAAAAGTCTCTCATCTATTGCTGAGGCAATGACGGCTTTTATGCAGATCCTTGGATGTTCAAAGGAGTCACTCAGGAAAATTCTTCTGAGAGGCGAATTTGATGAGTATTCTGATGATAGAAGGATGCACTGCACAGCTCGGTTGGTTGAGATGCTCAATCAATACTCCGATGATCTTTACAAGTGTGCGGAGAGCGACCCCAAGGCCAAGTTTTTGATGGATGAGATCAAGATTTTGGAAGAAGCCAAAGGTATTGCGCTTCCAAATTTTCTTCCTCGCAATGCTTTTCTTTTAATCTTGCAATCAAAAGTGAGGGAGATTTCGAGCATACCTATTGGATTTGTAGATCAAGTCTGGAGTTACATTGAGGATGTTGTAATAACAGTCTTGATGAAACACTCGGAAAATTACTACCAGCTTCAGTTGTCTGCCAGAAGAGCTGGTCATAATCTGATGGCTAAGATGAAGGATAGGTCCATTAGGTGGATGATGGAGATTGTTGAAATGGAGAAGCTTACTGACTATACATGTGATCCTGAATATGTTGCTGAATGGAATAAGTTGATGGCTCAGCAGGAAGCATTTATGAATGGGGTTCTGCATGATGAGAAACGGCCTTCTACTATAGCTATACAGGGTATTGGGGAGGTTGAGGTTGAAGTCCTTAGGCATTACCCTCACGTTCTTGCTCAGGCTTTTGACCTGAAGATGAGGATGACTGCTTATTGGAAAGTTGTGCTGAGGAGGTTCGTTGATTGTATGGCACTGCATTTGCAGTTGTCTGTTTCAAATCTGGTGAACAAAGAGATGGAAGTTGAGATTGTTAATGAGTTGATGGGGCCATATGGTGGTGGAATTGAGAGGATGCTTGAGGAGTCACCGGCTGTGGCTGTTAAACGTGAGAAGCTGAACAAGAGTATCAAGAAGCTGAGGGACTCTAAGGAGGTTGTGGCCAAGATTATGGACGGCATCATTAGCTATGGTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000266 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007005 GO:0008017 GO:0008092 GO:0008150 GO:0009987 GO:0015631 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0044424 GO:0044464 GO:0048285 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko04139 ko04214 ko04217 ko04621 ko04668 ko05162 ko05164 ko05165 map04139 map04214 map04217 map04621 map04668 map05162 map05164 map05165

Pfam Domains

Protein Families

Dynamin_M Dynamin_N GED

Protein Analysis

677

Amino Acids

75.59

Weight (kDa)

5.53

Isoelectric Point (pI)

43.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	72 - 246	1.5e-40	Dynamin family
Dynamin_M	PF01031	253 - 537	6.8e-60	Dynamin central region
GED	PF02212	579 - 667	1e-08	Dynamin GTPase effector domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000365)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60500 AT1G60530
fragaria_vesca	FvH4_4g34670 FvH4_7g03430 FvH4_7g03440 FvH4_7g03780
malus_domestica	MD02G1282600.v1.1 MD02G1282700.v1.1 MD02G1282900.v1.1 MD14G1008400.v1.1 MD14G1008800.v1.1 MD14G1008900.v1.1 MD14G1009000.v1.1 MD14G1009200.v1.1 MD14G1009300.v1.1
prunus_persica	Prupe.2G039500_v2.0.a1 Prupe.2G039600_v2.0.a1 Prupe.2G039800_v2.0.a1 Prupe.2G039900_v2.0.a1 Prupe.2G040000_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015300_v2.0.a1
pyrus_communis	pycom02g24110 pycom02g24120 pycom14g00720 pycom14g00740 pycom14g00780
rosa_chinensis	RchiOBHm_Chr1g0325781 RchiOBHm_Chr1g0326171 RchiOBHm_Chr1g0326211 RchiOBHm_Chr1g0327001 RchiOBHm_Chr1g0327051 RchiOBHm_Chr1g0327071 RchiOBHm_Chr1g0327091 RchiOBHm_Chr1g0327111 RchiOBHm_Chr2g0127731 RchiOBHm_Chr2g0127741 RchiOBHm_Chr4g0444021
rosa_laevigata	RLG00000005864 RLG00000005866 RLG00000030044 RLG00000030045 RLG00000030047 RLG00000030048 RLG00000030083 RLG00000030106
rosa_multiflora	Rmu_sc0000795.1_g000013 Rmu_sc0000795.1_g000046 Rmu_sc0000795.1_g000049 Rmu_sc0004240.1_g000005 Rmu_sc0004240.1_g000006 Rmu_sc0006009.1_g000005 Rmu_sc0015522.1_g000011 Rmu_sc0025852.1_g000001
rosa_roxburghii	Rroxscaffold_4G00323340 Rroxscaffold_4G00323420 Rroxscaffold_4G00323950 Rroxscaffold_4G00324390 Rroxscaffold_5G00384590
rosa_rugosa	Rorug01G0054400 Rorug01G0057700 Rorug01G0062800 Rorug01G0062900 Rorug01G0063200 Rorug01G0063300 Rorug04G0349000
rosa_samantha	Rh1AG069900 Rh1AG070200 Rh1AG070400 Rh1AG070700 Rh1AG071000 Rh1AG074600 Rh1AG079800 Rh1AG080000 Rh1AG080600 Rh1BG057600 Rh1BG060000 Rh1BG064000 Rh1CG070400 Rh1CG073100 Rh1CG077500 Rh1CG077600 Rh1CG078000 Rh1CG078600 Rh1DG075100 Rh1DG079900 Rh1DG084000 Rh1DG084100 Rh1DG084400 Rh1DG084900 Rh1DG085000 Rh2BG332700 Rh4AG409800 Rh4BG420900 Rh4CG435200 Rh4DG416100
rosa_wichuraiana	Rw1G005780 Rw1G005990 Rw1G006330 Rw1G006340 Rw1G006380 Rw1G006390 Rw2G026260 Rw4G035200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	288
Acc65I	GGTACC	2 cut(s)	91, 502
AccB1I	GGYRCC	3 cut(s)	91, 310, 502
AccB7I	CCANNNNNTGG	2 cut(s)	1527, 1892
AccIII	TCCGGA	1 cut(s)	748
AciI	CCGC	4 cut(s)	30, 388, 450, 1232
AclWI	GGATC	5 cut(s)	193, 206, 531, 1084, 1571
AcoI	YGGCCR	4 cut(s)	66, 289, 556, 1995
AcsI	RAATTY	6 cut(s)	55, 459, 973, 1122, 1139, 1309
AcuI	CTGAAG	3 cut(s)	432, 1448, 1769
AcvI	CACGTG	1 cut(s)	287
AfaI	GTAC	3 cut(s)	48, 93, 504
AfiI	CCNNNNNNNGG	3 cut(s)	554, 1527, 1892
AflIII	ACRYGT	1 cut(s)	1571
AgsI	TTSAA	8 cut(s)	27, 260, 875, 953, 1104, 1547, 1703, 1833
AhlI	ACTAGT	2 cut(s)	431, 959
AjnI	CCWGG	1 cut(s)	305
AleI	CACNNNNGTG	1 cut(s)	308
Alw26I	GTCTC	5 cut(s)	222, 582, 822, 827, 1055
AlwI	GGATC	5 cut(s)	193, 206, 531, 1084, 1571
Aor13HI	TCCGGA	1 cut(s)	748
AoxI	GGCC	8 cut(s)	66, 267, 289, 556, 1248, 1658, 1883, 1995
ApeKI	GCWGC	3 cut(s)	32, 328, 331
ApoI	RAATTY	6 cut(s)	55, 459, 973, 1122, 1139, 1309
Asp718I	GGTACC	2 cut(s)	91, 502
AspLEI	GCGC	1 cut(s)	1303
AspS9I	GGNCC	3 cut(s)	385, 1518, 1883
AsuC2I	CCSGG	1 cut(s)	531
AsuHPI	GGTGA	3 cut(s)	719, 1852, 1914
AvaII	GGWCC	2 cut(s)	385, 1518
AxyI	CCTNAGG	1 cut(s)	1709
BaeI	ACNNNNGTAYC	2 cut(s)	1945, 1978
BalI	TGGCCA	4 cut(s)	68, 291, 558, 1997
BamHI	GGATCC	1 cut(s)	198
BanI	GGYRCC	3 cut(s)	91, 310, 502
BauI	CACGAG	1 cut(s)	863
BbrPI	CACGTG	1 cut(s)	287
BbsI	GAAGAC	2 cut(s)	405, 420
BbvCI	CCTCAGC	3 cut(s)	1065, 1784, 1973
BbvI	GCAGC	3 cut(s)	19, 315, 343
BccI	CCATC	8 cut(s)	110, 175, 1255, 1492, 1528, 1603, 1846, 1873
BceAI	ACGGC	4 cut(s)	789, 1092, 1673, 2026
BciT130I	CCWGG	1 cut(s)	307
BclI	TGATCA	1 cut(s)	594
BcnI	CCSGG	1 cut(s)	531
BcoDI	GTCTC	5 cut(s)	222, 582, 822, 827, 1055
BcuI	ACTAGT	2 cut(s)	431, 959
BfaI	CTAG	5 cut(s)	50, 432, 485, 540, 960
BfmI	CTRYAG	2 cut(s)	329, 1668
BfuAI	ACCTGC	1 cut(s)	288
BisI	GCNGC	3 cut(s)	33, 329, 332
BlpI	GCTNAGC	1 cut(s)	1614
BlsI	GCNGC	3 cut(s)	34, 330, 333
Bme1390I	CCNGG	2 cut(s)	307, 531
Bme18I	GGWCC	2 cut(s)	385, 1518
BmgT120I	GGNCC	3 cut(s)	385, 1518, 1883
BmiI	GGNNCC	8 cut(s)	93, 176, 200, 312, 351, 504, 747, 1884
BmrFI	CCNGG	2 cut(s)	307, 531
BmsI	GCATC	7 cut(s)	145, 282, 306, 1158, 1185, 1899, 2022
BpiI	GAAGAC	2 cut(s)	405, 420
BpmI	CTGGAG	2 cut(s)	465, 1420
Bpu10I	CCTNAGC	4 cut(s)	1065, 1734, 1784, 1973
Bpu1102I	GCTNAGC	1 cut(s)	1614
BpuEI	CTTGAG	1 cut(s)	1934
BpuMI	CCSGG	1 cut(s)	531
Bsa29I	ATCGAT	1 cut(s)	674
BsaAI	YACGTR	1 cut(s)	287
BsaI	GGTCTC	1 cut(s)	222
BsaJI	CCNNGG	6 cut(s)	63, 292, 306, 516, 1093, 1245
BsaWI	WCCGGW	3 cut(s)	505, 547, 748
BsaXI	ACNNNNNCTCC	4 cut(s)	347, 377, 743, 773
Bsc4I	CCNNNNNNNGG	3 cut(s)	554, 1527, 1892
Bse118I	RCCGGY	1 cut(s)	1924
Bse1I	ACTGG	3 cut(s)	232, 709, 923
Bse21I	CCTNAGG	1 cut(s)	1709
Bse3DI	GCAATG	3 cut(s)	479, 1077, 1330
BseAI	TCCGGA	1 cut(s)	748
BseBI	CCWGG	1 cut(s)	307
BseCI	ATCGAT	1 cut(s)	674
BseDI	CCNNGG	6 cut(s)	63, 292, 306, 516, 1093, 1245
BseLI	CCNNNNNNNGG	3 cut(s)	554, 1527, 1892
BseMI	GCAATG	3 cut(s)	479, 1077, 1330
BseMII	CTCAG	7 cut(s)	1056, 1121, 1129, 1628, 1748, 1775, 1964
BseNI	ACTGG	3 cut(s)	232, 709, 923
BseRI	GAGGAG	4 cut(s)	21, 857, 1801, 1931
BseXI	GCAGC	3 cut(s)	19, 315, 343
BsgI	GTGCAG	2 cut(s)	286, 1159
BshFI	GGCC	8 cut(s)	68, 269, 291, 558, 1250, 1660, 1885, 1997
BshNI	GGYRCC	3 cut(s)	91, 310, 502
BshVI	ATCGAT	1 cut(s)	674
BsiSI	CCGG	8 cut(s)	353, 506, 530, 548, 614, 749, 980, 1925
BslFI	GGGAC	2 cut(s)	768, 1991
BslI	CCNNNNNNNGG	3 cut(s)	554, 1527, 1892
BsmAI	GTCTC	5 cut(s)	222, 582, 822, 827, 1055
BsmBI	CGTCTC	1 cut(s)	822
BsmFI	GGGAC	2 cut(s)	768, 1991
BsnI	GGCC	8 cut(s)	68, 269, 291, 558, 1250, 1660, 1885, 1997
Bso31I	GGTCTC	1 cut(s)	222
Bsp13I	TCCGGA	1 cut(s)	748
Bsp143I	GATC	9 cut(s)	198, 523, 594, 996, 1089, 1216, 1269, 1390, 1576
Bsp1720I	GCTNAGC	1 cut(s)	1614
Bsp19I	CCATGG	1 cut(s)	516
BspACI	CCGC	4 cut(s)	30, 388, 450, 1232
BspANI	GGCC	8 cut(s)	68, 269, 291, 558, 1250, 1660, 1885, 1997
BspCNI	CTCAG	7 cut(s)	1057, 1122, 1128, 1627, 1747, 1776, 1965
BspDI	ATCGAT	1 cut(s)	674
BspEI	TCCGGA	1 cut(s)	748
BspLI	GGNNCC	8 cut(s)	93, 176, 200, 312, 351, 504, 747, 1884
BspMAI	CTGCAG	1 cut(s)	333
BspMI	ACCTGC	1 cut(s)	288
BspPI	GGATC	5 cut(s)	193, 206, 531, 1084, 1571
BspQI	GCTCTTC	1 cut(s)	1474
BspT107I	GGYRCC	3 cut(s)	91, 310, 502
BspTNI	GGTCTC	1 cut(s)	222
BsrDI	GCAATG	3 cut(s)	479, 1077, 1330
BsrFI	RCCGGY	1 cut(s)	1924
BsrI	ACTGG	3 cut(s)	232, 709, 923
BssAI	RCCGGY	1 cut(s)	1924
BssECI	CCNNGG	6 cut(s)	63, 292, 306, 516, 1093, 1245
BssMI	GATC	9 cut(s)	198, 523, 594, 996, 1089, 1216, 1269, 1390, 1576
BssSI	CACGAG	1 cut(s)	863
BssT1I	CCWWGG	5 cut(s)	63, 292, 516, 1093, 1245
Bst2BI	CACGAG	1 cut(s)	863
Bst2UI	CCWGG	1 cut(s)	307
Bst4CI	ACNGT	2 cut(s)	759, 1429
Bst6I	CTCTTC	3 cut(s)	612, 891, 1474
BstBAI	YACGTR	1 cut(s)	287
BstC8I	GCNNGC	3 cut(s)	271, 560, 1018
BstDSI	CCRYGG	1 cut(s)	516
BstHHI	GCGC	1 cut(s)	1303
BstKTI	GATC	9 cut(s)	201, 526, 597, 999, 1092, 1219, 1272, 1393, 1579
BstMAI	GTCTC	5 cut(s)	222, 582, 822, 827, 1055
BstMBI	GATC	9 cut(s)	198, 523, 594, 996, 1089, 1216, 1269, 1390, 1576
BstMWI	GCNNNNNNNGC	4 cut(s)	107, 1076, 1481, 2019
BstNI	CCWGG	1 cut(s)	307
BstNSI	RCATGY	1 cut(s)	1575
BstSCI	CCNGG	2 cut(s)	305, 529
BstSFI	CTRYAG	2 cut(s)	329, 1668
BstV1I	GCAGC	3 cut(s)	19, 315, 343
BstV2I	GAAGAC	2 cut(s)	405, 420
BstX2I	RGATCY	3 cut(s)	198, 523, 1089
BstXI	CCANNNNNNTGG	2 cut(s)	239, 2005
BstYI	RGATCY	3 cut(s)	198, 523, 1089
Bsu15I	ATCGAT	1 cut(s)	674
Bsu36I	CCTNAGG	1 cut(s)	1709
BsuRI	GGCC	8 cut(s)	68, 269, 291, 558, 1250, 1660, 1885, 1997
BsuTUI	ATCGAT	1 cut(s)	674
BtgI	CCRYGG	1 cut(s)	516
BtgZI	GCGATG	1 cut(s)	424
BtsI	GCAGTG	3 cut(s)	165, 1171, 1808
BtsIMutI	CAGTG	3 cut(s)	165, 1171, 1808
BveI	ACCTGC	1 cut(s)	288
Cac8I	GCNNGC	3 cut(s)	271, 560, 1018
CfoI	GCGC	1 cut(s)	1303
Cfr10I	RCCGGY	1 cut(s)	1924
Cfr13I	GGNCC	3 cut(s)	385, 1518, 1883
ClaI	ATCGAT	1 cut(s)	674
CseI	GACGC	1 cut(s)	241
Csp6I	GTAC	3 cut(s)	47, 92, 503
CviAII	CATG	7 cut(s)	338, 517, 554, 592, 598, 1572, 1646
CviQI	GTAC	3 cut(s)	47, 92, 503
DpnI	GATC	9 cut(s)	200, 525, 596, 998, 1091, 1218, 1271, 1392, 1578
DpnII	GATC	9 cut(s)	198, 523, 594, 996, 1089, 1216, 1269, 1390, 1576
EaeI	YGGCCR	4 cut(s)	66, 289, 556, 1995
Eam1104I	CTCTTC	3 cut(s)	612, 891, 1474
EarI	CTCTTC	3 cut(s)	612, 891, 1474
Eco130I	CCWWGG	5 cut(s)	63, 292, 516, 1093, 1245
Eco31I	GGTCTC	1 cut(s)	222
Eco47I	GGWCC	2 cut(s)	385, 1518
Eco57I	CTGAAG	3 cut(s)	432, 1448, 1769
Eco72I	CACGTG	1 cut(s)	287
Eco81I	CCTNAGG	1 cut(s)	1709
EcoRII	CCWGG	1 cut(s)	305
EcoT14I	CCWWGG	5 cut(s)	63, 292, 516, 1093, 1245
ErhI	CCWWGG	5 cut(s)	63, 292, 516, 1093, 1245
Esp3I	CGTCTC	1 cut(s)	822
FaeI	CATG	7 cut(s)	341, 520, 557, 595, 601, 1575, 1649
FaqI	GGGAC	2 cut(s)	768, 1991
FatI	CATG	7 cut(s)	337, 516, 553, 591, 597, 1571, 1645
FauNDI	CATATG	1 cut(s)	1888
FbaI	TGATCA	1 cut(s)	594
Fnu4HI	GCNGC	3 cut(s)	33, 329, 332
Fsp4HI	GCNGC	3 cut(s)	33, 329, 332
FspBI	CTAG	5 cut(s)	50, 432, 485, 540, 960
GlaI	GCGC	1 cut(s)	1302
GluI	GCNGC	3 cut(s)	33, 329, 332
GsuI	CTGGAG	2 cut(s)	465, 1420
HaeIII	GGCC	8 cut(s)	68, 269, 291, 558, 1250, 1660, 1885, 1997
HapII	CCGG	8 cut(s)	353, 506, 530, 548, 614, 749, 980, 1925
HgaI	GACGC	1 cut(s)	241
HhaI	GCGC	1 cut(s)	1303
Hin1II	CATG	7 cut(s)	341, 520, 557, 595, 601, 1575, 1649
Hin6I	GCGC	1 cut(s)	1301
HinP1I	GCGC	1 cut(s)	1301
HincII	GTYRAC	3 cut(s)	739, 787, 916
HindII	GTYRAC	3 cut(s)	739, 787, 916
HindIII	AAGCTT	2 cut(s)	167, 1556
HinfI	GANTC	8 cut(s)	260, 534, 671, 949, 1008, 1109, 1919, 1979
HpaII	CCGG	8 cut(s)	353, 506, 530, 548, 614, 749, 980, 1925
HphI	GGTGA	3 cut(s)	719, 1852, 1914
Hpy166II	GTNNAC	6 cut(s)	163, 385, 739, 787, 916, 1843
Hpy188III	TCNNGA	9 cut(s)	240, 749, 863, 1117, 1273, 1399, 1432, 1580, 1966
Hpy8I	GTNNAC	6 cut(s)	163, 385, 739, 787, 916, 1843
HpyAV	CCTTC	6 cut(s)	188, 418, 760, 1158, 1504, 1671
HpyCH4III	ACNGT	2 cut(s)	759, 1429
HpyCH4IV	ACGT	4 cut(s)	45, 286, 1725, 1942
HpyF10VI	GCNNNNNNNGC	4 cut(s)	107, 1076, 1481, 2019
HpySE526I	ACGT	4 cut(s)	45, 286, 1725, 1942
Hsp92II	CATG	7 cut(s)	341, 520, 557, 595, 601, 1575, 1649
HspAI	GCGC	1 cut(s)	1301
Kpn2I	TCCGGA	1 cut(s)	748
KpnI	GGTACC	2 cut(s)	95, 506
Ksp22I	TGATCA	1 cut(s)	594
Kzo9I	GATC	9 cut(s)	198, 523, 594, 996, 1089, 1216, 1269, 1390, 1576
LguI	GCTCTTC	1 cut(s)	1474
LmnI	GCTCC	4 cut(s)	210, 349, 355, 751
Lsp1109I	GCAGC	3 cut(s)	19, 315, 343
LweI	GCATC	7 cut(s)	145, 282, 306, 1158, 1185, 1899, 2022
MaeI	CTAG	5 cut(s)	50, 432, 485, 540, 960
MaeII	ACGT	4 cut(s)	45, 286, 1725, 1942
MaeIII	GTNAC	5 cut(s)	727, 769, 1110, 1403, 1920
MalI	GATC	9 cut(s)	200, 525, 596, 998, 1091, 1218, 1271, 1392, 1578
MboI	GATC	9 cut(s)	198, 523, 594, 996, 1089, 1216, 1269, 1390, 1576
MflI	RGATCY	3 cut(s)	198, 523, 1089
MlsI	TGGCCA	4 cut(s)	68, 291, 558, 1997
MluNI	TGGCCA	4 cut(s)	68, 291, 558, 1997
MlyI	GAGTC	4 cut(s)	1002, 1118, 1928, 1973
MmeI	TCCRAC	1 cut(s)	345
Mox20I	TGGCCA	4 cut(s)	68, 291, 558, 1997
MroI	TCCGGA	1 cut(s)	748
MscI	TGGCCA	4 cut(s)	68, 291, 558, 1997
MseI	TTAA	4 cut(s)	1337, 1869, 1938, 2032
MslI	CAYNNNNRTG	3 cut(s)	308, 342, 596
Msp20I	TGGCCA	4 cut(s)	68, 291, 558, 1997
MspA1I	CMGCKG	1 cut(s)	32
MspI	CCGG	8 cut(s)	353, 506, 530, 548, 614, 749, 980, 1925
MspR9I	CCNGG	2 cut(s)	307, 531
MvaI	CCWGG	1 cut(s)	307
MwoI	GCNNNNNNNGC	4 cut(s)	107, 1076, 1481, 2019
NciI	CCSGG	1 cut(s)	531
NcoI	CCATGG	1 cut(s)	516
NdeI	CATATG	1 cut(s)	1888
NdeII	GATC	9 cut(s)	198, 523, 594, 996, 1089, 1216, 1269, 1390, 1576
NlaIII	CATG	7 cut(s)	341, 520, 557, 595, 601, 1575, 1649
NlaIV	GGNNCC	8 cut(s)	93, 176, 200, 312, 351, 504, 747, 1884
NmuCI	GTSAC	4 cut(s)	727, 769, 1110, 1920
NspI	RCATGY	1 cut(s)	1575
OliI	CACNNNNGTG	1 cut(s)	308
PciI	ACATGT	1 cut(s)	1571
PciSI	GCTCTTC	1 cut(s)	1474
PfeI	GAWTC	4 cut(s)	260, 534, 671, 949
PflMI	CCANNNNNTGG	2 cut(s)	1527, 1892
PfoI	TCCNGGA	1 cut(s)	529
PkrI	GCNGC	3 cut(s)	34, 330, 333
PleI	GAGTC	4 cut(s)	1002, 1117, 1927, 1973
PmaCI	CACGTG	1 cut(s)	287
PmlI	CACGTG	1 cut(s)	287
PpsI	GAGTC	4 cut(s)	1002, 1117, 1927, 1973
Ppu21I	YACGTR	1 cut(s)	287
PscI	ACATGT	1 cut(s)	1571
Psp6I	CCWGG	1 cut(s)	305
PspCI	CACGTG	1 cut(s)	287
PspGI	CCWGG	1 cut(s)	305
PspN4I	GGNNCC	8 cut(s)	93, 176, 200, 312, 351, 504, 747, 1884
PspPI	GGNCC	3 cut(s)	385, 1518, 1883
PstI	CTGCAG	1 cut(s)	333
PsuI	RGATCY	3 cut(s)	198, 523, 1089
RsaI	GTAC	3 cut(s)	48, 93, 504
RsaNI	GTAC	3 cut(s)	47, 92, 503
RseI	CAYNNNNRTG	3 cut(s)	308, 342, 596
SapI	GCTCTTC	1 cut(s)	1474
SaqAI	TTAA	4 cut(s)	1337, 1869, 1938, 2032
SatI	GCNGC	3 cut(s)	33, 329, 332
Sau3AI	GATC	9 cut(s)	198, 523, 594, 996, 1089, 1216, 1269, 1390, 1576
Sau96I	GGNCC	3 cut(s)	385, 1518, 1883
SchI	GAGTC	4 cut(s)	1002, 1118, 1928, 1973
ScrFI	CCNGG	2 cut(s)	307, 531
SfaNI	GCATC	7 cut(s)	145, 282, 306, 1158, 1185, 1899, 2022
SfcI	CTRYAG	2 cut(s)	329, 1668
SinI	GGWCC	2 cut(s)	385, 1518
SmiMI	CAYNNNNRTG	3 cut(s)	308, 342, 596
SmlI	CTYRAG	1 cut(s)	1913
SmoI	CTYRAG	1 cut(s)	1913
SpeI	ACTAGT	2 cut(s)	431, 959
SsiI	CCGC	4 cut(s)	30, 388, 450, 1232
SspMI	CTAG	5 cut(s)	50, 432, 485, 540, 960
StyD4I	CCNGG	2 cut(s)	305, 529
StyI	CCWWGG	5 cut(s)	63, 292, 516, 1093, 1245
TaaI	ACNGT	2 cut(s)	759, 1429
TaiI	ACGT	4 cut(s)	48, 289, 1728, 1945
TaqI	TCGA	2 cut(s)	674, 1367
TfiI	GAWTC	4 cut(s)	260, 534, 671, 949
Tru1I	TTAA	4 cut(s)	1337, 1869, 1938, 2032
Tru9I	TTAA	4 cut(s)	1337, 1869, 1938, 2032
TscAI	CASTG	3 cut(s)	165, 1178, 1815
TseFI	GTSAC	4 cut(s)	727, 769, 1110, 1920
TseI	GCWGC	3 cut(s)	32, 328, 331
Tsp45I	GTSAC	4 cut(s)	727, 769, 1110, 1920
TspDTI	ATGAA	7 cut(s)	48, 207, 411, 542, 1451, 1523, 1646
TspGWI	ACGGA	1 cut(s)	131
TspRI	CASTG	3 cut(s)	165, 1178, 1815
Van91I	CCANNNNNTGG	2 cut(s)	1527, 1892
VpaK11BI	GGWCC	2 cut(s)	385, 1518
XapI	RAATTY	6 cut(s)	55, 459, 973, 1122, 1139, 1309
XceI	RCATGY	1 cut(s)	1575
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1258
XspI	CTAG	5 cut(s)	50, 432, 485, 540, 960

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.