Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0000365

Physical Location & Seq

Genomic Coordinates Reverse (-)

887226 .. 889529

Gene Structure 2304 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1008800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGCAGCATTGGAAGGAAAGGCTTCGTTTCCTACAGGGTCACGAAAGTGGTGTTTTCCCTTACCTGAAATCATTCTTAGTAAAAAAAGGTTCTCAACTGGAGGAAACGGAAGGACCAAGGCAAATGGAATCGAGTTGCACAGATTTAAACGGTGAAGGCTCCCTCGCCATGGTTCAGGCAGAACTAGACGCAGTACCTCTCAAATGCGCACCCATTGTGTCGTCCTACAACGACAAGATCCGCCCTCTTCTGGATGCGGTAGACAAGTTACGCAGCTTGATGGTGATGGATGAAGGCATTCAGCTGCCAACGATTGTGGTGGTCGGAGACCAGTCATCGGGGAAGTCCAGCGTGCTCGAATCCTTGGCCGGCATCAGCCTCCCTCGGGGCCAAGGCATCTGCAGGAGAGTGCCTCTTATTATGAGGCTGGAACACCACTCGAGTCCTCAGCCTGAACTTTCCTTGGAGTACAATGGCAGAGTTGATCGTACTGATGAAGACAATATCGCCAAAGATATTGTGAAAGCTACTAATTCTATTGCGGGAGGAGGTAAGGGAATTTCGAACACGCCACTTAATTTGTTGGTGAAGAAGAATGGGGTTCCGGATCTGACTATGGTTGATCTTCCGGGAATCACAAGGGTTCCGGTCCATGGCCAACCTGAAAATATTTATGATCAGATCAAAGATATGATCATGGAGTATATTAAGCCGGAAGAAAGTATTATTCTGAATGTATTGTCTGCTACGGTGGATTTTACTACGTGTGAGTCAATTCGGATGTCACAAAGTGTAGATAAAACTGGTGAGAGGACGCTCGCTGTGGTTACGAAAGTGGACAAGGCACCGGAAGGACTACTTGAGAAGGTCACCGGAGATGATGTAAACATTGGTCTTGGTTATGTCTGTGTAAGGAACAGGATTGGTGACGAAACTTATGAGGAGGCAGCGGCGATGGCTCATGAACTATTTCAAACCCATCCCCTGCTTTCGAAGATTGACAAGTCCATTGTCGGTATTCCAGTTTTAGCACAGAAGCTGGTCCAAATTCAAGCAAACAGCATAGCAAGAAATATACCCGATATAGTGAAGAAGATCAATGACAGGCTGAACTTCTGCATTATGGAACTGAATAAAATGCCAAAGAGTCTTTCATCTGTTGCCGAGGCCATGACGGCCTTTATGCAAATCATTGGCTTGGCTAAGGAATCGCTTAGGAAGATTCTTTTGAGAGGAGAATTTGACGAGTACGCAGAAGACAGCATGCACTGCACTGCTAGATTGGTCAACCTGTACTCTGATGAACTTCACAGATGTGCTGAAACTGATGCAAAGAGCAACTTCTTGATGAAGGAGATCAAGATCTTGGAGAAGGCCAAAGGTATTTCACTTCCAAATTTTCTTCCACGCAATGCTTTCCTCAGTATCTTGCAGGGAAAAGTGGATGAAATTTCGAGTATTCCGATAGCATTTGTGGAAAAAGTGTGGAGCTACATTGAAGAGGTGGTTATTTCTGTGTTGATGCATTATACGGAGAACTATCATCAGCTGCAGCTGTCAGCAAGGCGTGCCGGCCATAATCTAATGGCCAAGATGAAGGAAAGGTCAATCAAGTGGATGCTGGAGCTTGTAGAGATGGAAAAGCTGACAGATTATACATGTGATGGTGATTATGTTTCCGAATGGAACAAGTTGATGGCTAATCAAAATGAATTCATTCATGGAGTCTTAGCTGATGAGAAGAAACCTTCTATCATAGATATAGAAGGCATCGGGGAAGTGGAAGTCGGTTGTCTGAGGATGTACCCGCTTGTGTTAGGTCAAGCTTATGACCTTAAAATGAGAATGATTGCCTATTGGAAGGTTGTTTTGAGGAGGCTTGTGGACTCCATGGCATTGCACTTGCAGCTGTCTGTCTTTAAGCTTGTGAACAAAGAGTTGGAAGCTGAGATTGTGAATGAGTTGATGGGACCATACGGCGGGGGAATCGAGAGGATGCTGGAGGAGTCGCCGGCAGTGGCAGTAAAGCGTGAGAAGCTTAACAAAAGCATAAAAAAGCTGAGGGATTCTAAGGAGGTGGTGGCCAAGATTATGGACAGCATTACCACTTATGGTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000266 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006996 GO:0007005 GO:0008017 GO:0008092 GO:0008150 GO:0009987 GO:0015631 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0044424 GO:0044464 GO:0048285 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko04139 ko04214 ko04217 ko04621 ko04668 ko05162 ko05164 ko05165 map04139 map04214 map04217 map04621 map04668 map05162 map05164 map05165

Pfam Domains

Protein Families

Dynamin_M Dynamin_N GED

Protein Analysis

707

Amino Acids

79.04

Weight (kDa)

5.71

Isoelectric Point (pI)

40.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	105 - 279	8.3e-40	Dynamin family
Dynamin_M	PF01031	286 - 566	1.5e-61	Dynamin central region
GED	PF02212	609 - 696	8.7e-10	Dynamin GTPase effector domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000365)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G60500 AT1G60530
fragaria_vesca	FvH4_4g34670 FvH4_7g03430 FvH4_7g03440 FvH4_7g03780
malus_domestica	MD02G1282600.v1.1 MD02G1282700.v1.1 MD02G1282900.v1.1 MD14G1008400.v1.1 MD14G1008800.v1.1 MD14G1008900.v1.1 MD14G1009000.v1.1 MD14G1009200.v1.1 MD14G1009300.v1.1
prunus_persica	Prupe.2G039500_v2.0.a1 Prupe.2G039600_v2.0.a1 Prupe.2G039800_v2.0.a1 Prupe.2G039900_v2.0.a1 Prupe.2G040000_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015100_v2.0.a1 Prupe.7G015300_v2.0.a1
pyrus_communis	pycom02g24110 pycom02g24120 pycom14g00720 pycom14g00740 pycom14g00780
rosa_chinensis	RchiOBHm_Chr1g0325781 RchiOBHm_Chr1g0326171 RchiOBHm_Chr1g0326211 RchiOBHm_Chr1g0327001 RchiOBHm_Chr1g0327051 RchiOBHm_Chr1g0327071 RchiOBHm_Chr1g0327091 RchiOBHm_Chr1g0327111 RchiOBHm_Chr2g0127731 RchiOBHm_Chr2g0127741 RchiOBHm_Chr4g0444021
rosa_laevigata	RLG00000005864 RLG00000005866 RLG00000030044 RLG00000030045 RLG00000030047 RLG00000030048 RLG00000030083 RLG00000030106
rosa_multiflora	Rmu_sc0000795.1_g000013 Rmu_sc0000795.1_g000046 Rmu_sc0000795.1_g000049 Rmu_sc0004240.1_g000005 Rmu_sc0004240.1_g000006 Rmu_sc0006009.1_g000005 Rmu_sc0015522.1_g000011 Rmu_sc0025852.1_g000001
rosa_roxburghii	Rroxscaffold_4G00323340 Rroxscaffold_4G00323420 Rroxscaffold_4G00323950 Rroxscaffold_4G00324390 Rroxscaffold_5G00384590
rosa_rugosa	Rorug01G0054400 Rorug01G0057700 Rorug01G0062800 Rorug01G0062900 Rorug01G0063200 Rorug01G0063300 Rorug04G0349000
rosa_samantha	Rh1AG069900 Rh1AG070200 Rh1AG070400 Rh1AG070700 Rh1AG071000 Rh1AG074600 Rh1AG079800 Rh1AG080000 Rh1AG080600 Rh1BG057600 Rh1BG060000 Rh1BG064000 Rh1CG070400 Rh1CG073100 Rh1CG077500 Rh1CG077600 Rh1CG078000 Rh1CG078600 Rh1DG075100 Rh1DG079900 Rh1DG084000 Rh1DG084100 Rh1DG084400 Rh1DG084900 Rh1DG085000 Rh2BG332700 Rh4AG409800 Rh4BG420900 Rh4CG435200 Rh4DG416100
rosa_wichuraiana	Rw1G005780 Rw1G005990 Rw1G006330 Rw1G006340 Rw1G006380 Rw1G006390 Rw2G026260 Rw4G035200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	208
AccB1I	GGYRCC	1 cut(s)	844
AccI	GTMKAC	1 cut(s)	261
AccIII	TCCGGA	1 cut(s)	604
AciI	CCGC	6 cut(s)	241, 257, 542, 950, 1808, 1980
AclWI	GGATC	2 cut(s)	232, 615
AcoI	YGGCCR	5 cut(s)	366, 655, 1573, 1587, 2082
AcsI	RAATTY	6 cut(s)	558, 1047, 1238, 1396, 1449, 1712
AdeI	CACNNNGTG	1 cut(s)	791
AfaI	GTAC	6 cut(s)	195, 470, 490, 1250, 1295, 1805
AfiI	CCNNNNNNNGG	6 cut(s)	169, 250, 337, 385, 653, 1979
AflIII	ACRYGT	2 cut(s)	764, 1658
AgsI	TTSAA	3 cut(s)	974, 1052, 1499
AjuI	GAANNNNNNNTTGG	4 cut(s)	1135, 1167, 1922, 1954
AleI	CACNNNNGTG	2 cut(s)	45, 1314
Alw21I	GWGCWC	1 cut(s)	357
Alw26I	GTCTC	1 cut(s)	321
AlwI	GGATC	2 cut(s)	232, 615
AlwNI	CAGNNNCTG	1 cut(s)	1039
Ama87I	CYCGRG	2 cut(s)	384, 439
Aor13HI	TCCGGA	1 cut(s)	604
AoxI	GGCC	9 cut(s)	366, 388, 655, 1167, 1176, 1374, 1573, 1587, 2082
ApeKI	GCWGC	7 cut(s)	4, 273, 304, 947, 1549, 1552, 1906
ApoI	RAATTY	6 cut(s)	558, 1047, 1238, 1396, 1449, 1712
Asp700I	GAANNNNTTC	5 cut(s)	21, 71, 297, 969, 1716
AspLEI	GCGC	1 cut(s)	209
AspS9I	GGNCC	5 cut(s)	113, 388, 649, 1042, 1970
AsuC2I	CCSGG	1 cut(s)	630
AsuHPI	GGTGA	7 cut(s)	164, 295, 598, 818, 862, 938, 1679
AsuII	TTCGAA	2 cut(s)	563, 992
AvaI	CYCGRG	2 cut(s)	384, 439
AvaII	GGWCC	4 cut(s)	113, 649, 1042, 1970
BalI	TGGCCA	3 cut(s)	657, 1589, 2084
BanI	GGYRCC	1 cut(s)	844
BbsI	GAAGAC	2 cut(s)	504, 1263
Bbv12I	GWGCWC	1 cut(s)	357
BbvCI	CCTCAGC	2 cut(s)	447, 2060
BbvI	GCAGC	7 cut(s)	16, 285, 291, 959, 1536, 1564, 1918
BccI	CCATC	8 cut(s)	274, 280, 949, 987, 1630, 1658, 1690, 1960
BceAI	ACGGC	2 cut(s)	1191, 1993
BclI	TGATCA	2 cut(s)	676, 693
BcnI	CCSGG	1 cut(s)	630
BcoDI	GTCTC	1 cut(s)	321
BfaI	CTAG	2 cut(s)	185, 1278
BfmI	CTRYAG	3 cut(s)	32, 400, 1550
BglI	GCCNNNNNGGC	1 cut(s)	1175
BglII	AGATCT	1 cut(s)	1362
BisI	GCNGC	8 cut(s)	5, 274, 305, 948, 951, 1550, 1553, 1907
BlsI	GCNGC	8 cut(s)	6, 275, 306, 949, 952, 1551, 1554, 1908
Bme1390I	CCNGG	1 cut(s)	630
Bme18I	GGWCC	4 cut(s)	113, 649, 1042, 1970
BmeT110I	CYCGRG	2 cut(s)	384, 439
BmgT120I	GGNCC	5 cut(s)	113, 388, 649, 1042, 1970
BmiI	GGNNCC	6 cut(s)	160, 389, 603, 645, 846, 1971
BmrFI	CCNGG	1 cut(s)	630
BmsI	GCATC	8 cut(s)	244, 381, 405, 1318, 1512, 1608, 1779, 1986
BpiI	GAAGAC	2 cut(s)	504, 1263
BplI	GAGNNNNNCTC	2 cut(s)	397, 429
BpmI	CTGGAG	3 cut(s)	119, 1643, 2021
Bpu10I	CCTNAGC	4 cut(s)	447, 1203, 1214, 2060
Bpu14I	TTCGAA	2 cut(s)	563, 992
BpuEI	CTTGAG	1 cut(s)	881
BpuMI	CCSGG	1 cut(s)	630
BsaAI	YACGTR	1 cut(s)	765
BsaBI	GATNNNNATC	1 cut(s)	1361
BsaI	GGTCTC	1 cut(s)	321
BsaJI	CCNNGG	9 cut(s)	116, 168, 363, 383, 391, 462, 652, 1164, 1890
BsaWI	WCCGGW	4 cut(s)	604, 646, 847, 872
BsaXI	ACNNNNNCTCC	2 cut(s)	867, 897
Bsc4I	CCNNNNNNNGG	6 cut(s)	169, 250, 337, 385, 653, 1979
Bse118I	RCCGGY	3 cut(s)	368, 1571, 2011
Bse1I	ACTGG	4 cut(s)	102, 331, 808, 1022
Bse3DI	GCAATG	2 cut(s)	1417, 1895
Bse8I	GATNNNNATC	1 cut(s)	1361
BseAI	TCCGGA	1 cut(s)	604
BseDI	CCNNGG	9 cut(s)	116, 168, 363, 383, 391, 462, 652, 1164, 1890
BseGI	GGATG	8 cut(s)	259, 295, 786, 979, 1450, 1623, 1806, 2001
BseJI	GATNNNNATC	1 cut(s)	1361
BseLI	CCNNNNNNNGG	6 cut(s)	169, 250, 337, 385, 653, 1979
BseMI	GCAATG	2 cut(s)	1417, 1895
BseMII	CTCAG	5 cut(s)	461, 1435, 1787, 1938, 2051
BseNI	ACTGG	4 cut(s)	102, 331, 808, 1022
BseRI	GAGGAG	5 cut(s)	561, 956, 1248, 1888, 2018
BseXI	GCAGC	7 cut(s)	16, 285, 291, 959, 1536, 1564, 1918
BsgI	GTGCAG	1 cut(s)	1255
BshFI	GGCC	9 cut(s)	368, 390, 657, 1169, 1178, 1376, 1575, 1589, 2084
BshNI	GGYRCC	1 cut(s)	844
BsiHKAI	GWGCWC	1 cut(s)	357
BsiHKCI	CYCGRG	2 cut(s)	384, 439
BsiSI	CCGG	9 cut(s)	369, 605, 629, 647, 713, 848, 873, 1572, 2012
BslFI	GGGAC	1 cut(s)	1983
BslI	CCNNNNNNNGG	6 cut(s)	169, 250, 337, 385, 653, 1979
BsmAI	GTCTC	1 cut(s)	321
BsmFI	GGGAC	1 cut(s)	1983
BsmI	GAATGC	1 cut(s)	297
BsnI	GGCC	9 cut(s)	368, 390, 657, 1169, 1178, 1376, 1575, 1589, 2084
Bso31I	GGTCTC	1 cut(s)	321
BsoBI	CYCGRG	2 cut(s)	384, 439
Bsp119I	TTCGAA	2 cut(s)	563, 992
Bsp1286I	GDGCHC	1 cut(s)	357
Bsp13I	TCCGGA	1 cut(s)	604
Bsp19I	CCATGG	3 cut(s)	168, 652, 1890
BspACI	CCGC	6 cut(s)	241, 257, 542, 950, 1808, 1980
BspANI	GGCC	9 cut(s)	368, 390, 657, 1169, 1178, 1376, 1575, 1589, 2084
BspCNI	CTCAG	5 cut(s)	460, 1434, 1788, 1939, 2052
BspEI	TCCGGA	1 cut(s)	604
BspHI	TCATGA	1 cut(s)	961
BspLI	GGNNCC	6 cut(s)	160, 389, 603, 645, 846, 1971
BspMAI	CTGCAG	2 cut(s)	404, 1554
BspPI	GGATC	2 cut(s)	232, 615
BspT104I	TTCGAA	2 cut(s)	563, 992
BspT107I	GGYRCC	1 cut(s)	844
BspTNI	GGTCTC	1 cut(s)	321
BsrDI	GCAATG	2 cut(s)	1417, 1895
BsrFI	RCCGGY	3 cut(s)	368, 1571, 2011
BsrI	ACTGG	4 cut(s)	102, 331, 808, 1022
BssAI	RCCGGY	3 cut(s)	368, 1571, 2011
BssECI	CCNNGG	9 cut(s)	116, 168, 363, 383, 391, 462, 652, 1164, 1890
BssT1I	CCWWGG	7 cut(s)	116, 168, 363, 391, 462, 652, 1890
Bst4CI	ACNGT	2 cut(s)	152, 751
Bst6I	CTCTTC	2 cut(s)	252, 1494
BstAPI	GCANNNNNTGC	2 cut(s)	1269, 1568
BstBAI	YACGTR	1 cut(s)	765
BstBI	TTCGAA	2 cut(s)	563, 992
BstC8I	GCNNGC	7 cut(s)	353, 370, 819, 1265, 1569, 1573, 2013
BstDSI	CCRYGG	3 cut(s)	168, 652, 1890
BstEII	GGTNACC	1 cut(s)	868
BstF5I	GGATG	8 cut(s)	259, 295, 786, 979, 1450, 1623, 1806, 2001
BstHHI	GCGC	1 cut(s)	209
BstMAI	GTCTC	1 cut(s)	321
BstMWI	GCNNNNNNNGC	6 cut(s)	956, 1175, 1269, 1568, 1906, 2035
BstNSI	RCATGY	2 cut(s)	1267, 1662
BstPI	GGTNACC	1 cut(s)	868
BstSCI	CCNGG	1 cut(s)	628
BstSFI	CTRYAG	3 cut(s)	32, 400, 1550
BstV1I	GCAGC	7 cut(s)	16, 285, 291, 959, 1536, 1564, 1918
BstV2I	GAAGAC	2 cut(s)	504, 1263
BstX2I	RGATCY	3 cut(s)	237, 607, 1362
BstXI	CCANNNNNNTGG	1 cut(s)	2092
BstYI	RGATCY	3 cut(s)	237, 607, 1362
BsuRI	GGCC	9 cut(s)	368, 390, 657, 1169, 1178, 1376, 1575, 1589, 2084
BtgI	CCRYGG	3 cut(s)	168, 652, 1890
BtgZI	GCGATG	1 cut(s)	968
BtsCI	GGATG	8 cut(s)	259, 295, 786, 979, 1450, 1623, 1806, 2001
BtsI	GCAGTG	3 cut(s)	1267, 1272, 2022
BtsIMutI	CAGTG	3 cut(s)	1267, 1272, 2022
Cac8I	GCNNGC	7 cut(s)	353, 370, 819, 1265, 1569, 1573, 2013
CaiI	CAGNNNCTG	1 cut(s)	1039
CciI	TCATGA	1 cut(s)	961
CfoI	GCGC	1 cut(s)	209
Cfr10I	RCCGGY	3 cut(s)	368, 1571, 2011
Cfr13I	GGNCC	5 cut(s)	113, 388, 649, 1042, 1970
CseI	GACGC	2 cut(s)	197, 823
Csp6I	GTAC	6 cut(s)	194, 469, 489, 1249, 1294, 1804
CspCI	CAANNNNNGTGG	4 cut(s)	297, 332, 561, 596
CviAII	CATG	9 cut(s)	169, 653, 697, 962, 1171, 1264, 1659, 1721, 1891
CviQI	GTAC	6 cut(s)	194, 469, 489, 1249, 1294, 1804
DraI	TTTAAA	1 cut(s)	147
DraIII	CACNNNGTG	1 cut(s)	791
EaeI	YGGCCR	5 cut(s)	366, 655, 1573, 1587, 2082
Eam1104I	CTCTTC	2 cut(s)	252, 1494
EarI	CTCTTC	2 cut(s)	252, 1494
EciI	GGCGGA	1 cut(s)	230
Eco130I	CCWWGG	7 cut(s)	116, 168, 363, 391, 462, 652, 1890
Eco31I	GGTCTC	1 cut(s)	321
Eco47I	GGWCC	4 cut(s)	113, 649, 1042, 1970
Eco88I	CYCGRG	2 cut(s)	384, 439
Eco91I	GGTNACC	1 cut(s)	868
EcoO65I	GGTNACC	1 cut(s)	868
EcoRI	GAATTC	1 cut(s)	1712
EcoT14I	CCWWGG	7 cut(s)	116, 168, 363, 391, 462, 652, 1890
EcoT22I	ATGCAT	1 cut(s)	1527
ErhI	CCWWGG	7 cut(s)	116, 168, 363, 391, 462, 652, 1890
FaeI	CATG	9 cut(s)	172, 656, 700, 965, 1174, 1267, 1662, 1724, 1894
FalI	AAGNNNNNCTT	4 cut(s)	843, 875, 1325, 1357
FaqI	GGGAC	1 cut(s)	1983
FatI	CATG	9 cut(s)	168, 652, 696, 961, 1170, 1263, 1658, 1720, 1890
FauI	CCCGC	3 cut(s)	535, 1815, 1973
FbaI	TGATCA	2 cut(s)	676, 693
FblI	GTMKAC	1 cut(s)	261
Fnu4HI	GCNGC	8 cut(s)	5, 274, 305, 948, 951, 1550, 1553, 1907
FokI	GGATG	8 cut(s)	266, 302, 793, 966, 1457, 1630, 1813, 2008
Fsp4HI	GCNGC	8 cut(s)	5, 274, 305, 948, 951, 1550, 1553, 1907
FspAI	RTGCGCAY	1 cut(s)	208
FspBI	CTAG	2 cut(s)	185, 1278
FspI	TGCGCA	1 cut(s)	208
GlaI	GCGC	1 cut(s)	208
GluI	GCNGC	8 cut(s)	5, 274, 305, 948, 951, 1550, 1553, 1907
GsuI	CTGGAG	3 cut(s)	119, 1643, 2021
HaeIII	GGCC	9 cut(s)	368, 390, 657, 1169, 1178, 1376, 1575, 1589, 2084
HapII	CCGG	9 cut(s)	369, 605, 629, 647, 713, 848, 873, 1572, 2012
HgaI	GACGC	2 cut(s)	197, 823
HhaI	GCGC	1 cut(s)	209
Hin1II	CATG	9 cut(s)	172, 656, 700, 965, 1174, 1267, 1662, 1724, 1894
Hin6I	GCGC	1 cut(s)	207
HinP1I	GCGC	1 cut(s)	207
HincII	GTYRAC	1 cut(s)	1288
HindII	GTYRAC	1 cut(s)	1288
HindIII	AAGCTT	3 cut(s)	1824, 1922, 2036
HpaII	CCGG	9 cut(s)	369, 605, 629, 647, 713, 848, 873, 1572, 2012
HphI	GGTGA	7 cut(s)	164, 295, 598, 818, 862, 938, 1679
Hpy166II	GTNNAC	6 cut(s)	262, 838, 886, 1288, 1885, 1930
Hpy188I	TCNGA	9 cut(s)	326, 612, 681, 732, 780, 1300, 1464, 1681, 1797
Hpy188III	TCNNGA	7 cut(s)	41, 251, 605, 962, 1345, 1360, 1990
Hpy8I	GTNNAC	6 cut(s)	262, 838, 886, 1288, 1885, 1930
HpyCH4III	ACNGT	2 cut(s)	152, 751
HpyCH4IV	ACGT	1 cut(s)	764
HpyF10VI	GCNNNNNNNGC	6 cut(s)	956, 1175, 1269, 1568, 1906, 2035
HpySE526I	ACGT	1 cut(s)	764
Hsp92II	CATG	9 cut(s)	172, 656, 700, 965, 1174, 1267, 1662, 1724, 1894
HspAI	GCGC	1 cut(s)	207
Kpn2I	TCCGGA	1 cut(s)	604
KroI	GCCGGC	3 cut(s)	368, 1571, 2011
KroNI	GCCGGC	3 cut(s)	370, 1573, 2013
Ksp22I	TGATCA	2 cut(s)	676, 693
LmnI	GCTCC	3 cut(s)	164, 1488, 1624
Lsp1109I	GCAGC	7 cut(s)	16, 285, 291, 959, 1536, 1564, 1918
LweI	GCATC	8 cut(s)	244, 381, 405, 1318, 1512, 1608, 1779, 1986
MaeI	CTAG	2 cut(s)	185, 1278
MaeII	ACGT	1 cut(s)	764
MaeIII	GTNAC	6 cut(s)	38, 267, 783, 826, 868, 926
MflI	RGATCY	3 cut(s)	237, 607, 1362
MhlI	GDGCHC	1 cut(s)	357
MlsI	TGGCCA	3 cut(s)	657, 1589, 2084
MluCI	AATT	9 cut(s)	532, 558, 577, 774, 1047, 1238, 1396, 1449, 1712
MluNI	TGGCCA	3 cut(s)	657, 1589, 2084
MlyI	GAGTC	6 cut(s)	451, 779, 1156, 1734, 1880, 2015
MmeI	TCCRAC	2 cut(s)	304, 1920
Mox20I	TGGCCA	3 cut(s)	657, 1589, 2084
Mph1103I	ATGCAT	1 cut(s)	1527
MroI	TCCGGA	1 cut(s)	604
MroNI	GCCGGC	3 cut(s)	368, 1571, 2011
MroXI	GAANNNNTTC	5 cut(s)	21, 71, 297, 969, 1716
MscI	TGGCCA	3 cut(s)	657, 1589, 2084
MseI	TTAA	7 cut(s)	146, 576, 708, 1836, 1920, 2040, 2119
MslI	CAYNNNNRTG	2 cut(s)	45, 1314
Msp20I	TGGCCA	3 cut(s)	657, 1589, 2084
MspA1I	CMGCKG	5 cut(s)	304, 950, 1549, 1555, 1909
MspI	CCGG	9 cut(s)	369, 605, 629, 647, 713, 848, 873, 1572, 2012
MspR9I	CCNGG	1 cut(s)	630
Mva1269I	GAATGC	1 cut(s)	297
MwoI	GCNNNNNNNGC	6 cut(s)	956, 1175, 1269, 1568, 1906, 2035
NaeI	GCCGGC	3 cut(s)	370, 1573, 2013
NciI	CCSGG	1 cut(s)	630
NcoI	CCATGG	3 cut(s)	168, 652, 1890
NgoMIV	GCCGGC	3 cut(s)	368, 1571, 2011
NlaIII	CATG	9 cut(s)	172, 656, 700, 965, 1174, 1267, 1662, 1724, 1894
NlaIV	GGNNCC	6 cut(s)	160, 389, 603, 645, 846, 1971
NmeAIII	GCCGAG	1 cut(s)	1189
NmuCI	GTSAC	4 cut(s)	38, 783, 868, 926
NsbI	TGCGCA	1 cut(s)	208
NsiI	ATGCAT	1 cut(s)	1527
NspI	RCATGY	2 cut(s)	1267, 1662
NspV	TTCGAA	2 cut(s)	563, 992
OliI	CACNNNNGTG	2 cut(s)	45, 1314
PaeI	GCATGC	1 cut(s)	1267
PaeR7I	CTCGAG	1 cut(s)	439
PagI	TCATGA	1 cut(s)	961
PciI	ACATGT	1 cut(s)	1658
PcsI	WCGNNNNNNNCGW	1 cut(s)	1460
PctI	GAATGC	1 cut(s)	297
PdiI	GCCGGC	3 cut(s)	370, 1573, 2013
PdmI	GAANNNNTTC	5 cut(s)	21, 71, 297, 969, 1716
PfeI	GAWTC	7 cut(s)	128, 359, 633, 1208, 1222, 1986, 2066
PfoI	TCCNGGA	1 cut(s)	628
PkrI	GCNGC	8 cut(s)	6, 275, 306, 949, 952, 1551, 1554, 1908
PleI	GAGTC	6 cut(s)	450, 778, 1155, 1733, 1880, 2014
PpsI	GAGTC	6 cut(s)	450, 778, 1155, 1733, 1880, 2014
Ppu21I	YACGTR	1 cut(s)	765
PscI	ACATGT	1 cut(s)	1658
PspEI	GGTNACC	1 cut(s)	868
PspN4I	GGNNCC	6 cut(s)	160, 389, 603, 645, 846, 1971
PspPI	GGNCC	5 cut(s)	113, 388, 649, 1042, 1970
PspXI	VCTCGAGB	1 cut(s)	439
PstI	CTGCAG	2 cut(s)	404, 1554
PstNI	CAGNNNCTG	1 cut(s)	1039
PsuI	RGATCY	3 cut(s)	237, 607, 1362
PvuII	CAGCTG	4 cut(s)	304, 1549, 1555, 1909
RsaI	GTAC	6 cut(s)	195, 470, 490, 1250, 1295, 1805
RsaNI	GTAC	6 cut(s)	194, 469, 489, 1249, 1294, 1804
RseI	CAYNNNNRTG	2 cut(s)	45, 1314
SaqAI	TTAA	7 cut(s)	146, 576, 708, 1836, 1920, 2040, 2119
SatI	GCNGC	8 cut(s)	5, 274, 305, 948, 951, 1550, 1553, 1907
Sau96I	GGNCC	5 cut(s)	113, 388, 649, 1042, 1970
SchI	GAGTC	6 cut(s)	451, 779, 1156, 1734, 1880, 2015
ScrFI	CCNGG	1 cut(s)	630
SduI	GDGCHC	1 cut(s)	357
SfaNI	GCATC	8 cut(s)	244, 381, 405, 1318, 1512, 1608, 1779, 1986
SfcI	CTRYAG	3 cut(s)	32, 400, 1550
SfiI	GGCCNNNNNGGCC	1 cut(s)	1175
Sfr274I	CTCGAG	1 cut(s)	439
SfuI	TTCGAA	2 cut(s)	563, 992
SinI	GGWCC	4 cut(s)	113, 649, 1042, 1970
SlaI	CTCGAG	1 cut(s)	439
SmiMI	CAYNNNNRTG	2 cut(s)	45, 1314
SmlI	CTYRAG	2 cut(s)	439, 860
SmoI	CTYRAG	2 cut(s)	439, 860
SphI	GCATGC	1 cut(s)	1267
Sse9I	AATT	9 cut(s)	532, 558, 577, 774, 1047, 1238, 1396, 1449, 1712
SsiI	CCGC	6 cut(s)	241, 257, 542, 950, 1808, 1980
SspI	AATATT	1 cut(s)	670
SspMI	CTAG	2 cut(s)	185, 1278
StyD4I	CCNGG	1 cut(s)	628
StyI	CCWWGG	7 cut(s)	116, 168, 363, 391, 462, 652, 1890
TaaI	ACNGT	2 cut(s)	152, 751
TaiI	ACGT	1 cut(s)	767
TaqI	TCGA	7 cut(s)	131, 357, 440, 563, 992, 1454, 1989
TasI	AATT	9 cut(s)	532, 558, 577, 774, 1047, 1238, 1396, 1449, 1712
TatI	WGTACW	2 cut(s)	468, 1293
TauI	GCSGC	1 cut(s)	953
TfiI	GAWTC	7 cut(s)	128, 359, 633, 1208, 1222, 1986, 2066
Tru1I	TTAA	7 cut(s)	146, 576, 708, 1836, 1920, 2040, 2119
Tru9I	TTAA	7 cut(s)	146, 576, 708, 1836, 1920, 2040, 2119
TscAI	CASTG	3 cut(s)	1274, 1279, 2022
TseFI	GTSAC	4 cut(s)	38, 783, 868, 926
TseI	GCWGC	7 cut(s)	4, 273, 304, 947, 1549, 1552, 1906
Tsp45I	GTSAC	4 cut(s)	38, 783, 868, 926
TspGWI	ACGGA	2 cut(s)	122, 1547
TspRI	CASTG	3 cut(s)	1274, 1279, 2022
VpaK11BI	GGWCC	4 cut(s)	113, 649, 1042, 1970
XapI	RAATTY	6 cut(s)	558, 1047, 1238, 1396, 1449, 1712
XceI	RCATGY	2 cut(s)	1267, 1662
XhoI	CTCGAG	1 cut(s)	439
XmiI	GTMKAC	1 cut(s)	261
XmnI	GAANNNNTTC	5 cut(s)	21, 71, 297, 969, 1716
XspI	CTAG	2 cut(s)	185, 1278
Zsp2I	ATGCAT	1 cut(s)	1527

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.