Prupe.1G032100_v2.0.a1

Inhibitor of trypsin and hageman factor-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000470
Physical Location & Seq
Forward (+)
2255521 .. 2256566
1046 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G032100.1

Sequence Viewer

Length: 291 bp
ATGCATCCCTCCCTCCCTCCCTCCCTCACAAACATATCACAAGAGATATCAGTGGGAACACTAACGCAAAAGGCGATGATGGCATCTGGATGTAAAGGTAAGGATTCATGGCCTGAGCTGGTGGGAGCCGAGGGGAAAGTTGCCAAGGCAACAATTGAGAGGGAGAATCCTTTAGTCACTGCTCTGATTCTGCATCTAGGAGCACCTATTACCCAAGATCTCCGATTTGATAGGGTTCGTGTTTGGGTTAATACAAATGGCATCGTTACTTGGATCCCAGTAATTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
potato_inhibit

Protein Analysis

97

Amino Acids

10.39

Weight (kDa)

7.95

Isoelectric Point (pI)

32.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000470)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G43570 AT5G43570 AT5G43580
fragaria_vesca FvH4_4g02840 FvH4_4g02850 FvH4_4g02860 FvH4_4g02870 FvH4_4g02880 FvH4_4g02930
malus_domestica MD13G1208300.v1.1 MD13G1208400.v1.1 MD13G1208500.v1.1 MD13G1208700.v1.1 MD16G1210300.v1.1 MD16G1210400.v1.1
prunus_persica Prupe.1G032000_v2.0.a1 Prupe.1G032100_v2.0.a1 Prupe.1G032400_v2.0.a1 Prupe.1G032500_v2.0.a1 Prupe.1G032700_v2.0.a1 Prupe.I000200_v2.0.a1 Prupe.I000300_v2.0.a1
pyrus_communis pycom13g18030 pycom13g18040 pycom13g18050 pycom13g18060 pycom13g18080
rosa_chinensis RchiOBHm_Chr4g0390821 RchiOBHm_Chr4g0390831 RchiOBHm_Chr4g0390841 RchiOBHm_Chr4g0390891 RchiOBHm_Chr4g0390911 RchiOBHm_Chr4g0390921 RchiOBHm_Chr4g0390951 RchiOBHm_Chr4g0390971
rosa_laevigata RLG00000009909
rosa_multiflora Rmu_co8497379.1_g000001 Rmu_sc0000171.1_g000002 Rmu_sc0000171.1_g000003 Rmu_sc0000171.1_g000004 Rmu_sc0000171.1_g000009 Rmu_sc0000171.1_g000010 Rmu_sc0000171.1_g000014 Rmu_sc0000171.1_g000018 Rmu_sc0000171.1_g000019 Rmu_sc0001824.1_g000004 Rmu_sc0016732.1_g000001
rosa_roxburghii Rroxscaffold_5G00336740 Rroxscaffold_5G00336750 Rroxscaffold_5G00336760 Rroxscaffold_5G00336770 Rroxscaffold_5G00336790 Rroxscaffold_5G00336830
rosa_rugosa Rorug03G0331900 Rorug03G0331900 Rorug03G0331900 Rorug03G0332000 Rorug03G0332300 Rorug03G0332500
rosa_samantha Rh4AG033300 Rh4AG033400 Rh4AG033500 Rh4AG033600 Rh4AG033800 Rh4AG034000 Rh4BG027200 Rh4BG027300 Rh4BG027500 Rh4BG027700 Rh4BG027800 Rh4BG028100 Rh4BG028200 Rh4BG028400 Rh4CG036900 Rh4CG037000 Rh4CG037200 Rh4CG037400 Rh4DG030300 Rh4DG030400 Rh4DG030500 Rh4DG030600 Rh4DG030800 Rh4DG031100 Rh4DG031300
rosa_wichuraiana Rw4G002560 Rw4G002580 Rw4G002600 Rw4G002610 Rw4G002620 Rw4G002640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 268, 281
AluBI AGCT 1 cut(s) 118
AluI AGCT 1 cut(s) 118
Alw21I GWGCWC 1 cut(s) 205
AlwI GGATC 2 cut(s) 268, 281
AoxI GGCC 1 cut(s) 110
BamHI GGATCC 1 cut(s) 273
Bbv12I GWGCWC 1 cut(s) 205
BccI CCATC 1 cut(s) 73
BfaI CTAG 1 cut(s) 197
BglII AGATCT 1 cut(s) 217
BmiI GGNNCC 2 cut(s) 127, 275
BmrI ACTGGG 1 cut(s) 272
BmsI GCATC 4 cut(s) 13, 92, 202, 270
BmuI ACTGGG 1 cut(s) 272
Bpu10I CCTNAGC 1 cut(s) 114
BsaJI CCNNGG 2 cut(s) 129, 144
Bse1I ACTGG 1 cut(s) 278
BseDI CCNNGG 2 cut(s) 129, 144
BseGI GGATG 2 cut(s) 4, 95
BseMII CTCAG 1 cut(s) 105
BseNI ACTGG 1 cut(s) 278
BshFI GGCC 1 cut(s) 112
BsiHKAI GWGCWC 1 cut(s) 205
BsnI GGCC 1 cut(s) 112
Bsp1286I GDGCHC 1 cut(s) 205
Bsp143I GATC 2 cut(s) 217, 273
BspANI GGCC 1 cut(s) 112
BspCNI CTCAG 1 cut(s) 106
BspLI GGNNCC 2 cut(s) 127, 275
BspPI GGATC 2 cut(s) 268, 281
BsrI ACTGG 1 cut(s) 278
BssECI CCNNGG 2 cut(s) 129, 144
BssMI GATC 2 cut(s) 217, 273
BssT1I CCWWGG 1 cut(s) 144
BstDEI CTNAG 1 cut(s) 114
BstF5I GGATG 2 cut(s) 4, 95
BstKTI GATC 2 cut(s) 220, 276
BstMBI GATC 2 cut(s) 217, 273
BstMWI GCNNNNNNNGC 1 cut(s) 80
BstX2I RGATCY 2 cut(s) 217, 273
BstYI RGATCY 2 cut(s) 217, 273
BsuRI GGCC 1 cut(s) 112
BtgZI GCGATG 1 cut(s) 89
BtsCI GGATG 2 cut(s) 4, 95
BtsI GCAGTG 1 cut(s) 177
BtsIMutI CAGTG 2 cut(s) 57, 177
CviAII CATG 1 cut(s) 108
CviJI RGCY 3 cut(s) 112, 118, 128
CviKI_1 RGCY 3 cut(s) 112, 118, 128
DdeI CTNAG 1 cut(s) 114
DpnI GATC 2 cut(s) 219, 275
DpnII GATC 2 cut(s) 217, 273
Eco130I CCWWGG 1 cut(s) 144
Eco32I GATATC 1 cut(s) 48
EcoRV GATATC 1 cut(s) 48
EcoT14I CCWWGG 1 cut(s) 144
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 144
FaeI CATG 1 cut(s) 111
FaiI YATR 3 cut(s) 35, 109, 289
FatI CATG 1 cut(s) 107
FokI GGATG 1 cut(s) 102
FspBI CTAG 1 cut(s) 197
HaeIII GGCC 1 cut(s) 112
Hin1II CATG 1 cut(s) 111
HinfI GANTC 3 cut(s) 104, 166, 187
Hpy188I TCNGA 2 cut(s) 186, 224
Hpy188III TCNNGA 1 cut(s) 87
HpyCH4V TGCA 3 cut(s) 4, 193, 287
HpyF10VI GCNNNNNNNGC 1 cut(s) 80
HpyF3I CTNAG 1 cut(s) 114
Hsp92II CATG 1 cut(s) 111
Kzo9I GATC 2 cut(s) 217, 273
LmnI GCTCC 2 cut(s) 125, 200
LpnPI CCDG 3 cut(s) 72, 104, 126
LweI GCATC 4 cut(s) 13, 92, 202, 270
MaeI CTAG 1 cut(s) 197
MaeIII GTNAC 2 cut(s) 175, 265
MalI GATC 2 cut(s) 219, 275
MboI GATC 2 cut(s) 217, 273
MfeI CAATTG 1 cut(s) 153
MflI RGATCY 2 cut(s) 217, 273
MhlI GDGCHC 1 cut(s) 205
MluCI AATT 2 cut(s) 153, 282
MnlI CCTC 7 cut(s) 19, 23, 27, 31, 35, 124, 153
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 1 cut(s) 249
MslI CAYNNNNRTG 1 cut(s) 88
MunI CAATTG 1 cut(s) 153
MwoI GCNNNNNNNGC 1 cut(s) 80
NdeII GATC 2 cut(s) 217, 273
NlaIII CATG 1 cut(s) 111
NlaIV GGNNCC 2 cut(s) 127, 275
NmeAIII GCCGAG 1 cut(s) 154
NmuCI GTSAC 1 cut(s) 175
NsiI ATGCAT 1 cut(s) 6
PcsI WCGNNNNNNNCGW 1 cut(s) 71
PfeI GAWTC 3 cut(s) 104, 166, 187
PspN4I GGNNCC 2 cut(s) 127, 275
PsuI RGATCY 2 cut(s) 217, 273
RseI CAYNNNNRTG 1 cut(s) 88
SaqAI TTAA 1 cut(s) 249
Sau3AI GATC 2 cut(s) 217, 273
SduI GDGCHC 1 cut(s) 205
SetI ASST 3 cut(s) 100, 120, 208
SfaNI GCATC 4 cut(s) 13, 92, 202, 270
SmiMI CAYNNNNRTG 1 cut(s) 88
Sse9I AATT 2 cut(s) 153, 282
SspMI CTAG 1 cut(s) 197
StyI CCWWGG 1 cut(s) 144
TasI AATT 2 cut(s) 153, 282
TfiI GAWTC 3 cut(s) 104, 166, 187
Tru1I TTAA 1 cut(s) 249
Tru9I TTAA 1 cut(s) 249
TscAI CASTG 2 cut(s) 57, 184
TseFI GTSAC 1 cut(s) 175
Tsp45I GTSAC 1 cut(s) 175
TspDTI ATGAA 1 cut(s) 96
TspRI CASTG 2 cut(s) 57, 184
XspI CTAG 1 cut(s) 197
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.