Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0000599

Physical Location & Seq

Genomic Coordinates Reverse (-)

18146524 .. 18155251

Gene Structure 8728 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G193500.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4023 bp

ATGAGGAGCAAACTGGACTTTCCCATGGAGAATTGTGCACAGCATATGGACTTGAGCTTGGGAGGTGGTGATAGCAACACCCTCATCTTGCCAGCAAAGAGAAGGAACAAAAGGAAGGGCACCAATCAGGACTGTGAAAAACTCAATCAAAGAAAAGCAACAATGATTAGCAAATCCCAGCAAAGGAAGCTGAAGAAGTTGGAGGAGGAGAAGGAAAAATCACTTTCCATATCCAAAAGCATTGAGGCCTTAGAGAAATATAAGCTTCCAGAGGGTGCACATTCTCTTTTGCAGTCATCAAAGAATATTGGCAAGGTTGAGTCTAAAAAGGAAAAACGTAGGAAGGCTGTACTATTCTCCAAAGCTGGCTTTGGTGTTCCCCTTACTGACCAACCGTTTAAGAAGATAGATAGTGAAAGTGAAAGTGAAAGTGAACCTGAGTTAGAAAAAACTCAATCAAGGTCGGATCTTTGCAAGAATGATCAGGTGCAATCAAAGATAGTCCCAGCAGCAATCCAAAAGAACACATTTATTTCTTTGGATGGCAGAGGACCTGGCGTGAATGGTGGAACTGCTGCTGACTCACCATATAAAAATGCTATTAGCAATAAACATGACACGTCTTTGCGAGAAGACATAAACATTTTGCCCACTTCAAGTGTGAATGATGATAGTCAAAGCATGAAGATGGACAAAGTAAAAGAAACACCAAATGTAAATTTCAGCAGGACGAGTAAATTATCAAATTCTCCTATGCCGAGGTCTCTAATCGCCCCAACTATAGTGCATGTATCAAGGCCTGAGGAAGTTGAAAATGCAAGGAAGGATCTTCCAATAGTAATGATGGAGCAGGAGATAATGGAGGCTGTTAATGACCATTCCACTGTTATTATATGTGGAGAGACTGGGTGTGGTAAAACCACCCAAGTTCCACAGTTTCTTTTTGAAGCCGGCTTTGGTTCAAGCTTCTCTTGTGTCCGAAGTGGTATAATTGGTGTTACTCAACCTCGTCGTGTTGCAGTCCTTGCGACTGCTAAGCGAGTGGCATATGAGCTTGGTCTACATTTAGGTCAAGAGGTCGGGTTTCAAGTTAGGTATGACAAAAGGATCGGTGAAAGTTGCTCCATCAAGTTCATGACAGATGGAATATTACTACGGGAACTTCAGAATGACTTTTTGCTGAAGCGATACTCTGTCATAATTATTGACGAGGCTCATGAGCGGAGCTTGAACACTGACATTCTTATCGGAATGCTTTCACGTGTAATTCGTGCTCGCGAGGAAAAATATGCAGAGCAGCAACGGGAGGTGCTTTCAGGAAGAACTATAAGTACTGGGCAACAGATTTTTCCATTGAAGCTTGTTCTGATGAGTGCCACCTTGCGAGTGGAAGACTTCATGTCTGGTAGAAAGCTGTTTCGCAATCCTCCGCCAGTTGTAGAAGTTCCCACCAGACAATTTCCTGTAACCATTTACTTTTCAAGCAGAACCAAGGAAGAGGATTATATTGGGCAAGCATGTAAAAAAGTCTTGGCAATTCACAAGAGGCTGCCACGCGGGGGCATACTTGTCTTCGTCACTGGGCAGAAGGAAGTAGAGTATTTGTGTCGAAAGCTACGTAGAGTTTCAAAGGAACAGTATAAAAAAACATCTGAAGGGGATATTAGGAGTGATGTCACTGAAGTTTCTGAAAGAAGTTCTACTGAGGAAATAGACATGAAGGAGATCAATGAAGCATTTGAGGTTCATGGAAATTCAGCTGACCATCAAACTGACAGATTTAGCTATAATGATGAAGATCAGTTTGATATAGATGACGATGAGTTGGATGATTCATATGATTCAGAAACAGAGAGTGAACTGGAAATTATTGGTGACTATGGCAACTCATTGATCCGAGCTAGCCCGGAAATTGATGGTGATGTTGAAAATGTTTTAGGAGAGGAAGGGGGCATTACTCAACTGAAGGCTGCTTTTGAAGCTTTAGACGCAAAAACTTCATTTAACTTCAACTCTGATGAGAAACAACCTATTTCAGTTACTCCAAACGCTTGCCCCAATCAATCCAATCCTAGCATGGGAAAAAAGAGTGGAGTTGAAGAGAATACTTCTCCAGGTACATTGCATGTTCTCCCTCTTTATGCCATGCTCCATGCGAAAGATCAGCTTCGTGTATTTGAAGAAGTCAGGGAAGGAGAACGGCTCGTTGTTGTGGCCACCAATGTGGCTGAAACATCTTTAACTATACCTGGGATAAAGTACGTTGTCGATACTGGAAGAGAGAAAGTGAAGAGCTACAATTCCTCAAATGGCATGGAAACATATGAAGTACAGTGGATAAGTAAGGCATCAGCTGCTCAACGTGCAGGAAGAGCTGGAAGAACTGGGCCTGGATACTGTTATCGTCTGTATTCTTCTGCAGCATATAGTAACATATTTCCTGACTTTTCTCCAGCTGAAATATCTAAAGTCCCTGTTGATGGTGTTGTACTTTACATGAAATCCATGAATATTGATAAGGTATCCAATTTTCCATTTCCAACTCCTCCAGAGGGTGCTGCCTTGGATGAAGCTGAGCGTTGCTTAAAGATCCTTCAAGCACTTGACAGCAATGGAAGACTGACACCTTTAGGGAAGGCCATGGCTGATTTCCCCATGAGTCCTCGCCACTCTAGGATGCTCCTTACAGTTATTCAAATAATGAGTAAGGAGAAGAGTTACTCTAGGGCTAATTTAGTGCTAGCATACGCAGTTGCAGCAGCAGCTGCTTTGAGTTTGTCAAATCCTTTTGTCAGGCAGTTTGAAGATAGTCACACAAAAAGCCAAGACTTAGATGAGGACGGAAATTCCAGTGGCACTGTGAACATTGAAGTTATGGACAAGCAAGAGAAGTTGAGAAGGAAGAAACTAAAAGAAACTGTAAAAATGTTTCGTGAAAAATTTTCTAATCCCAGCAGTGATGCTCTGTCTGTAGCTTATGCTTTGCAGTGCTATGAACTTTCAGAGAGCCCAGTGGAATTCTGTAATGTCAATGCCCTACACCCAAAAACAATGGAGGAAATGTCCAAGCTGAGAAAGCAACTACTCCAACTTGTCTTTAACCAAAGTGGTGTTTCTGGTGGGGAGAAGGATTTTTCATGGATTTTTGGAAGTTTGAAAGATGTAGAAAATGTTTGGAGGGTTTCCCATGATAAGAACCCTCTATTATTGTATGAGGAAGAGCTCCTAGGCCAAGCTATCTGCGCTGGTTGGGCAGATAGGGTTGCCAAACGCATTAGAGGAAGTTCCGGGTTATCTTTAGGAGATAAAAAAGTTCATGCAGTTTGGTATCAAGCCTGCATGGTTAAAGAGATTGTGTTCCTCCACCGTTGGTCATCCGTTTCTAATTCAGCCCCTGAGTTTTTGGTATACAGTGAGTTGATACAGACAAGACATCCGTACATGCACGGTGTTACTAGTGTGAAATCAGAATGGCTTGTTGAGTATGCTCGGTCTATATGCACGTTCTCTGCACCGCCAACAGATACCAAACCTTACTACGAGCCTCTAACTGACCAAGTATTACATTATGTCATTCCAGTCTTTGGTCCTCATTTATGGGAGCTTCCATCACATAGTATTCCAATTAGTAATTACGCATTTCGAGTGGCAGTTTTTGCTTATGCTTTGCTTGAAGGCCAGGTTTTGCCATGTTTAAGATCTGTTCGTAAGTATATGGCAGCCCCTCCTGCTAGTGTTTTAAGGCCAGAGGCAGCAGGTCAAAGACGGGTTGGGAGTCTTTTGGCTAAGCTGAATAGAAAAAAGATAGACAGCTGTGCTATTTTAAGAGAGGTCTGGAAGGAGAATCCCAAGGAATTGCATCCAGAAATCATGGACTGGTTTCAGGAGGGTTTCCACAATAATTTCAAAACTCTTTGGTCACATATGCTTAGTGAAGTAATTTTAGAGCCCCAAGATCGATTCCCAAAGGCATCAAAGAGAGAAGGAATGATCAGCCACTGTATCTGTAGGGAAATGCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010467 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD HA2 Helicase_C OB_NTP_bind

Protein Analysis

1341

Amino Acids

150.46

Weight (kDa)

7.0

Isoelectric Point (pI)

52.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000599)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33390 AT1G33390
fragaria_vesca	FvH4_3g40090 FvH4_3g40090 FvH4_3g40090 FvH4_6g48600
malus_domestica	MD04G1241500.v1.1 MD05G1017800.v1.1
prunus_persica	Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1
pyrus_communis	pycom04g21310 pycom05g01000 pycom05g01050 pycom11g20470
rosa_chinensis	RchiOBHm_Chr2g0168421 RchiOBHm_Chr2g0168431 RchiOBHm_Chr2g0168441 RchiOBHm_Chr2g0168451 RchiOBHm_Chr2g0168461 RchiOBHm_Chr4g0407811 RchiOBHm_Chr7g0220161 RchiOBHm_Chr7g0220171 RchiOBHm_Chr7g0220481
rosa_laevigata	RLG00000002253 RLG00000008696 RLG00000021781
rosa_multiflora	Rmu_co8232135.1_g000001 Rmu_sc0000966.1_g000007 Rmu_sc0003573.1_g000032 Rmu_sc0006361.1_g000012 Rmu_sc0006361.1_g000013 Rmu_sc0012607.1_g000001 Rmu_sc0016657.1_g000009
rosa_roxburghii	Rroxscaffold_2G00083000 Rroxscaffold_2G00083010 Rroxscaffold_3G00239750 Rroxscaffold_5G00352370
rosa_rugosa	Rorug02G0533800 Rorug02G0533800 Rorug04G0081400 Rorug07G0189900 Rorug07G0190000
rosa_samantha	Rh2AG603500 Rh2AG603700 Rh2BG616600 Rh2BG616700 Rh2BG616800 Rh2CG584500 Rh2CG584600 Rh2CG584700 Rh2DG627100 Rh2DG627200 Rh4AG146500 Rh4BG144000 Rh4CG153000 Rh4DG140500 Rh7AG332900 Rh7BG324300 Rh7BG324400 Rh7BG324500 Rh7CG350400 Rh7DG329000
rosa_wichuraiana	Rw0G022710 Rw2G050050 Rw4G011990 Rw7G028060 Rw7G028070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	3746
AccB1I	GGYRCC	1 cut(s)	119
AccB7I	CCANNNNNTGG	1 cut(s)	3584
AccBSI	CCGCTC	1 cut(s)	1222
AccI	GTMKAC	2 cut(s)	1060, 3408
AccII	CGCG	2 cut(s)	1278, 1557
AciI	CCGC	4 cut(s)	1222, 1430, 1557, 3515
AclWI	GGATC	5 cut(s)	474, 834, 1115, 1888, 2584
AcoI	YGGCCR	1 cut(s)	2214
AcsI	RAATTY	6 cut(s)	718, 745, 1753, 2845, 2939, 3017
AcuI	CTGAAG	6 cut(s)	212, 1148, 1202, 1674, 1701, 1985
AcvI	CACGTG	1 cut(s)	1262
AfaI	GTAC	7 cut(s)	351, 1333, 2119, 2261, 2331, 2490, 3440
AfiI	CCNNNNNNNGG	6 cut(s)	183, 1559, 2078, 2480, 2552, 3584
AflIII	ACRYGT	2 cut(s)	618, 1261
AhdI	GACNNNNNGTC	1 cut(s)	1399
AhlI	ACTAGT	1 cut(s)	3455
AjiI	CACGTC	1 cut(s)	621
AjnI	CCWGG	5 cut(s)	553, 2113, 2248, 2389, 3678
AjuI	GAANNNNNNNTTGG	2 cut(s)	939, 971
AleI	CACNNNNGTG	1 cut(s)	2222
Alw21I	GWGCWC	4 cut(s)	40, 280, 1276, 3225
Alw26I	GTCTC	2 cut(s)	768, 896
Alw44I	GTGCAC	2 cut(s)	36, 276
AlwI	GGATC	5 cut(s)	474, 834, 1115, 1888, 2584
AlwNI	CAGNNNCTG	3 cut(s)	2765, 3395, 3999
AoxI	GGCC	8 cut(s)	246, 797, 2214, 2387, 2637, 3229, 3676, 3743
ApaLI	GTGCAC	2 cut(s)	36, 276
ApoI	RAATTY	6 cut(s)	718, 745, 1753, 2845, 2939, 3017
Asp700I	GAANNNNTTC	1 cut(s)	1255
AspA2I	CCTAGG	1 cut(s)	3226
AspLEI	GCGC	1 cut(s)	3245
AspS9I	GGNCC	3 cut(s)	551, 2387, 3587
AsuC2I	CCSGG	2 cut(s)	1907, 3289
AsuHPI	GGTGA	5 cut(s)	80, 576, 1124, 1886, 1931
AsuNHI	GCTAGC	2 cut(s)	1901, 2740
AvaII	GGWCC	2 cut(s)	551, 3587
AvrII	CCTAGG	1 cut(s)	3226
AxyI	CCTNAGG	1 cut(s)	801
BaeGI	GKGCMC	3 cut(s)	40, 122, 280
BalI	TGGCCA	1 cut(s)	2216
BanI	GGYRCC	1 cut(s)	119
BanII	GRGCYC	3 cut(s)	3011, 3225, 3951
BbrPI	CACGTG	1 cut(s)	1262
BbsI	GAAGAC	4 cut(s)	639, 1398, 1564, 2623
Bbv12I	GWGCWC	4 cut(s)	40, 280, 1276, 3225
BccI	CCATC	9 cut(s)	536, 682, 838, 1133, 1136, 1773, 1910, 2474, 3616
BceAI	ACGGC	1 cut(s)	2216
BciT130I	CCWGG	5 cut(s)	555, 2115, 2250, 2391, 3680
BciVI	GTATCC	2 cut(s)	2387, 2533
BclI	TGATCA	2 cut(s)	481, 3990
BcnI	CCSGG	2 cut(s)	1907, 3289
BcoDI	GTCTC	2 cut(s)	768, 896
BcuI	ACTAGT	1 cut(s)	3455
BfaI	CTAG	8 cut(s)	1902, 2073, 2673, 2724, 2741, 3227, 3456, 3732
BfmI	CTRYAG	4 cut(s)	780, 2418, 2970, 4006
BfuAI	ACCTGC	1 cut(s)	3746
BfuI	GTATCC	2 cut(s)	2387, 2533
BglII	AGATCT	1 cut(s)	3698
BlnI	CCTAGG	1 cut(s)	3226
BlpI	GCTNAGC	3 cut(s)	1035, 2574, 3786
BmcAI	AGTACT	1 cut(s)	1333
Bme1390I	CCNGG	7 cut(s)	555, 1907, 2115, 2250, 2391, 3289, 3680
Bme18I	GGWCC	2 cut(s)	551, 3587
BmeRI	GACNNNNNGTC	1 cut(s)	1399
BmgBI	CACGTC	1 cut(s)	621
BmgT120I	GGNCC	3 cut(s)	551, 2387, 3587
BmiI	GGNNCC	1 cut(s)	121
BmrFI	CCNGG	7 cut(s)	555, 1907, 2115, 2250, 2391, 3289, 3680
BmrI	ACTGGG	5 cut(s)	915, 1344, 1590, 2394, 3005
BmsI	GCATC	5 cut(s)	2357, 2667, 2950, 3868, 3980
BmtI	GCTAGC	2 cut(s)	1905, 2744
BmuI	ACTGGG	5 cut(s)	915, 1344, 1590, 2394, 3005
BpiI	GAAGAC	4 cut(s)	639, 1398, 1564, 2623
BplI	GAGNNNNNCTC	2 cut(s)	2187, 2219
BpmI	CTGGAG	3 cut(s)	2097, 2436, 2532
Bpu1102I	GCTNAGC	3 cut(s)	1035, 2574, 3786
BpuEI	CTTGAG	1 cut(s)	73
BpuMI	CCSGG	2 cut(s)	1907, 3289
Bsa29I	ATCGAT	1 cut(s)	3958
BsaAI	YACGTR	2 cut(s)	1262, 1619
BsaBI	GATNNNNATC	1 cut(s)	1797
BsaI	GGTCTC	1 cut(s)	768
BsaJI	CCNNGG	8 cut(s)	24, 758, 1491, 2249, 2562, 2640, 3226, 3849
BsaXI	ACNNNNNCTCC	2 cut(s)	3047, 3077
Bsc4I	CCNNNNNNNGG	6 cut(s)	183, 1559, 2078, 2480, 2552, 3584
Bse118I	RCCGGY	1 cut(s)	950
Bse21I	CCTNAGG	1 cut(s)	801
Bse3DI	GCAATG	2 cut(s)	2120, 2617
Bse8I	GATNNNNATC	1 cut(s)	1797
BseBI	CCWGG	5 cut(s)	555, 2115, 2250, 2391, 3680
BseCI	ATCGAT	1 cut(s)	3958
BseDI	CCNNGG	8 cut(s)	24, 758, 1491, 2249, 2562, 2640, 3226, 3849
BseGI	GGATG	7 cut(s)	547, 1834, 2572, 2682, 3374, 3433, 3859
BseJI	GATNNNNATC	1 cut(s)	1797
BseLI	CCNNNNNNNGG	6 cut(s)	183, 1559, 2078, 2480, 2552, 3584
BseMI	GCAATG	2 cut(s)	2120, 2617
BseMII	CTCAG	6 cut(s)	429, 792, 1695, 2565, 3062, 3387
BseRI	GAGGAG	4 cut(s)	19, 218, 221, 2535
BseSI	GKGCMC	3 cut(s)	40, 122, 280
BseYI	CCCAGC	3 cut(s)	177, 505, 2951
BsgI	GTGCAG	2 cut(s)	2385, 3495
Bsh1236I	CGCG	2 cut(s)	1278, 1557
BshFI	GGCC	8 cut(s)	248, 799, 2216, 2389, 2639, 3231, 3678, 3745
BshNI	GGYRCC	1 cut(s)	119
BshVI	ATCGAT	1 cut(s)	3958
BsiHKAI	GWGCWC	4 cut(s)	40, 280, 1276, 3225
BsiSI	CCGG	3 cut(s)	951, 1907, 3288
BslFI	GGGAC	2 cut(s)	488, 2456
BslI	CCNNNNNNNGG	6 cut(s)	183, 1559, 2078, 2480, 2552, 3584
BsmAI	GTCTC	2 cut(s)	768, 896
BsmFI	GGGAC	2 cut(s)	488, 2456
BsmI	GAATGC	1 cut(s)	1257
BsnI	GGCC	8 cut(s)	248, 799, 2216, 2389, 2639, 3231, 3678, 3745
Bso31I	GGTCTC	1 cut(s)	768
Bsp1286I	GDGCHC	7 cut(s)	40, 122, 280, 1276, 3011, 3225, 3951
Bsp1720I	GCTNAGC	3 cut(s)	1035, 2574, 3786
Bsp19I	CCATGG	2 cut(s)	24, 2640
Bsp68I	TCGCGA	1 cut(s)	1278
BspACI	CCGC	4 cut(s)	1222, 1430, 1557, 3515
BspANI	GGCC	8 cut(s)	248, 799, 2216, 2389, 2639, 3231, 3678, 3745
BspCNI	CTCAG	6 cut(s)	430, 793, 1696, 2566, 3063, 3388
BspDI	ATCGAT	1 cut(s)	3958
BspFNI	CGCG	2 cut(s)	1278, 1557
BspHI	TCATGA	2 cut(s)	1134, 1216
BspLI	GGNNCC	1 cut(s)	121
BspMAI	CTGCAG	1 cut(s)	2422
BspMI	ACCTGC	1 cut(s)	3746
BspOI	GCTAGC	2 cut(s)	1905, 2744
BspPI	GGATC	5 cut(s)	474, 834, 1115, 1888, 2584
BspQI	GCTCTTC	3 cut(s)	2285, 2365, 3213
BspT107I	GGYRCC	1 cut(s)	119
BspTNI	GGTCTC	1 cut(s)	768
BsrBI	CCGCTC	1 cut(s)	1222
BsrDI	GCAATG	2 cut(s)	2120, 2617
BsrFI	RCCGGY	1 cut(s)	950
BssAI	RCCGGY	1 cut(s)	950
BssECI	CCNNGG	8 cut(s)	24, 758, 1491, 2249, 2562, 2640, 3226, 3849
BssNAI	GTATAC	1 cut(s)	3409
BssT1I	CCWWGG	6 cut(s)	24, 1491, 2562, 2640, 3226, 3849
Bst1107I	GTATAC	1 cut(s)	3409
Bst2UI	CCWGG	5 cut(s)	555, 2115, 2250, 2391, 3680
Bst6I	CTCTTC	7 cut(s)	1491, 2094, 2272, 2285, 2365, 2708, 3213
BstAPI	GCANNNNNTGC	4 cut(s)	1025, 2354, 2765, 3656
BstBAI	YACGTR	2 cut(s)	1262, 1619
BstC8I	GCNNGC	9 cut(s)	93, 367, 952, 1276, 1515, 1903, 2053, 2742, 3337
BstDSI	CCRYGG	2 cut(s)	24, 2640
BstF5I	GGATG	7 cut(s)	547, 1834, 2572, 2682, 3374, 3433, 3859
BstFNI	CGCG	2 cut(s)	1278, 1557
BstHHI	GCGC	1 cut(s)	3245
BstMAI	GTCTC	2 cut(s)	768, 896
BstNI	CCWGG	5 cut(s)	555, 2115, 2250, 2391, 3680
BstNSI	RCATGY	4 cut(s)	791, 1521, 2129, 3445
BstSCI	CCNGG	7 cut(s)	553, 1905, 2113, 2248, 2389, 3287, 3678
BstSFI	CTRYAG	4 cut(s)	780, 2418, 2970, 4006
BstSLI	GKGCMC	3 cut(s)	40, 122, 280
BstSNI	TACGTA	1 cut(s)	1619
BstUI	CGCG	2 cut(s)	1278, 1557
BstV2I	GAAGAC	4 cut(s)	639, 1398, 1564, 2623
BstX2I	RGATCY	4 cut(s)	466, 826, 2589, 3698
BstXI	CCANNNNNNTGG	1 cut(s)	2224
BstYI	RGATCY	4 cut(s)	466, 826, 2589, 3698
BstZ17I	GTATAC	1 cut(s)	3409
Bsu15I	ATCGAT	1 cut(s)	3958
Bsu36I	CCTNAGG	1 cut(s)	801
BsuI	GTATCC	2 cut(s)	2387, 2533
BsuRI	GGCC	8 cut(s)	248, 799, 2216, 2389, 2639, 3231, 3678, 3745
BsuTUI	ATCGAT	1 cut(s)	3958
BtgI	CCRYGG	2 cut(s)	24, 2640
BtrI	CACGTC	1 cut(s)	621
BtsCI	GGATG	7 cut(s)	547, 1834, 2572, 2682, 3374, 3433, 3859
BtsI	GCAGTG	2 cut(s)	2962, 2993
BtuMI	TCGCGA	1 cut(s)	1278
BveI	ACCTGC	1 cut(s)	3746
Cac8I	GCNNGC	9 cut(s)	93, 367, 952, 1276, 1515, 1903, 2053, 2742, 3337
CaiI	CAGNNNCTG	3 cut(s)	2765, 3395, 3999
CciI	TCATGA	2 cut(s)	1134, 1216
CfoI	GCGC	1 cut(s)	3245
Cfr10I	RCCGGY	1 cut(s)	950
Cfr13I	GGNCC	3 cut(s)	551, 2387, 3587
ClaI	ATCGAT	1 cut(s)	3958
CseI	GACGC	1 cut(s)	1997
Csp6I	GTAC	7 cut(s)	350, 1332, 2118, 2260, 2330, 2489, 3439
CviQI	GTAC	7 cut(s)	350, 1332, 2118, 2260, 2330, 2489, 3439
DriI	GACNNNNNGTC	1 cut(s)	1399
EaeI	YGGCCR	1 cut(s)	2214
Eam1104I	CTCTTC	7 cut(s)	1491, 2094, 2272, 2285, 2365, 2708, 3213
Eam1105I	GACNNNNNGTC	1 cut(s)	1399
EarI	CTCTTC	7 cut(s)	1491, 2094, 2272, 2285, 2365, 2708, 3213
EciI	GGCGGA	1 cut(s)	1419
Ecl136II	GAGCTC	1 cut(s)	3223
Eco105I	TACGTA	1 cut(s)	1619
Eco130I	CCWWGG	6 cut(s)	24, 1491, 2562, 2640, 3226, 3849
Eco147I	AGGCCT	2 cut(s)	248, 799
Eco24I	GRGCYC	3 cut(s)	3011, 3225, 3951
Eco31I	GGTCTC	1 cut(s)	768
Eco47I	GGWCC	2 cut(s)	551, 3587
Eco53kI	GAGCTC	1 cut(s)	3223
Eco57I	CTGAAG	6 cut(s)	212, 1148, 1202, 1674, 1701, 1985
Eco72I	CACGTG	1 cut(s)	1262
Eco81I	CCTNAGG	1 cut(s)	801
EcoICRI	GAGCTC	1 cut(s)	3223
EcoO109I	RGGNCCY	1 cut(s)	551
EcoRI	GAATTC	1 cut(s)	3017
EcoRII	CCWGG	5 cut(s)	553, 2113, 2248, 2389, 3678
EcoT14I	CCWWGG	6 cut(s)	24, 1491, 2562, 2640, 3226, 3849
EcoT22I	ATGCAT	1 cut(s)	4020
EcoT38I	GRGCYC	3 cut(s)	3011, 3225, 3951
ErhI	CCWWGG	6 cut(s)	24, 1491, 2562, 2640, 3226, 3849
FalI	AAGNNNNNCTT	4 cut(s)	955, 987, 2151, 2183
FaqI	GGGAC	2 cut(s)	488, 2456
FauI	CCCGC	1 cut(s)	1550
FauNDI	CATATG	5 cut(s)	45, 1048, 1837, 2323, 3924
FbaI	TGATCA	2 cut(s)	481, 3990
FblI	GTMKAC	2 cut(s)	1060, 3408
FokI	GGATG	7 cut(s)	554, 1841, 2579, 2689, 3361, 3420, 3846
FriOI	GRGCYC	3 cut(s)	3011, 3225, 3951
FspBI	CTAG	8 cut(s)	1902, 2073, 2673, 2724, 2741, 3227, 3456, 3732
GlaI	GCGC	1 cut(s)	3244
GsaI	CCCAGC	3 cut(s)	181, 509, 2955
GsuI	CTGGAG	3 cut(s)	2097, 2436, 2532
HaeIII	GGCC	8 cut(s)	248, 799, 2216, 2389, 2639, 3231, 3678, 3745
HapII	CCGG	3 cut(s)	951, 1907, 3288
HgaI	GACGC	1 cut(s)	1997
HhaI	GCGC	1 cut(s)	3245
Hin6I	GCGC	1 cut(s)	3243
HinP1I	GCGC	1 cut(s)	3243
HindIII	AAGCTT	4 cut(s)	263, 964, 1358, 1980
HinfI	GANTC	8 cut(s)	320, 581, 1832, 1841, 2659, 3775, 3844, 3960
HpaII	CCGG	3 cut(s)	951, 1907, 3288
HphI	GGTGA	5 cut(s)	80, 576, 1124, 1886, 1931
Hpy166II	GTNNAC	7 cut(s)	38, 278, 434, 1061, 1859, 2863, 3409
Hpy8I	GTNNAC	7 cut(s)	38, 278, 434, 1061, 1859, 2863, 3409
Hpy99I	CGWCG	1 cut(s)	1014
HpyCH4IV	ACGT	7 cut(s)	337, 620, 1261, 1618, 2262, 2362, 3503
HpySE526I	ACGT	7 cut(s)	337, 620, 1261, 1618, 2262, 2362, 3503
HspAI	GCGC	1 cut(s)	3243
KroI	GCCGGC	1 cut(s)	950
KroNI	GCCGGC	1 cut(s)	952
Ksp22I	TGATCA	2 cut(s)	481, 3990
LguI	GCTCTTC	3 cut(s)	2285, 2365, 3213
LmnI	GCTCC	8 cut(s)	6, 847, 1127, 1224, 2154, 2685, 3228, 3601
LweI	GCATC	5 cut(s)	2357, 2667, 2950, 3868, 3980
MaeI	CTAG	8 cut(s)	1902, 2073, 2673, 2724, 2741, 3227, 3456, 3732
MaeII	ACGT	7 cut(s)	337, 620, 1261, 1618, 2262, 2362, 3503
MbiI	CCGCTC	1 cut(s)	1222
MflI	RGATCY	4 cut(s)	466, 826, 2589, 3698
MhlI	GDGCHC	7 cut(s)	40, 122, 280, 1276, 3011, 3225, 3951
MlsI	TGGCCA	1 cut(s)	2216
MluNI	TGGCCA	1 cut(s)	2216
MlyI	GAGTC	4 cut(s)	329, 575, 2668, 3784
MmeI	TCCRAC	5 cut(s)	180, 444, 1806, 2564, 3112
Mox20I	TGGCCA	1 cut(s)	2216
Mph1103I	ATGCAT	1 cut(s)	4020
MroNI	GCCGGC	1 cut(s)	950
MroXI	GAANNNNTTC	1 cut(s)	1255
MscI	TGGCCA	1 cut(s)	2216
MslI	CAYNNNNRTG	2 cut(s)	686, 2222
Msp20I	TGGCCA	1 cut(s)	2216
MspA1I	CMGCKG	5 cut(s)	1760, 2354, 2456, 2765, 3813
MspI	CCGG	3 cut(s)	951, 1907, 3288
MspR9I	CCNGG	7 cut(s)	555, 1907, 2115, 2250, 2391, 3289, 3680
Mva1269I	GAATGC	1 cut(s)	1257
MvaI	CCWGG	5 cut(s)	555, 2115, 2250, 2391, 3680
MvnI	CGCG	2 cut(s)	1278, 1557
NaeI	GCCGGC	1 cut(s)	952
NciI	CCSGG	2 cut(s)	1907, 3289
NcoI	CCATGG	2 cut(s)	24, 2640
NdeI	CATATG	5 cut(s)	45, 1048, 1837, 2323, 3924
NgoMIV	GCCGGC	1 cut(s)	950
NheI	GCTAGC	2 cut(s)	1901, 2740
NlaIV	GGNNCC	1 cut(s)	121
NmeAIII	GCCGAG	1 cut(s)	783
NmuCI	GTSAC	5 cut(s)	1576, 1675, 1874, 2810, 3918
NruI	TCGCGA	1 cut(s)	1278
NsiI	ATGCAT	1 cut(s)	4020
NspI	RCATGY	4 cut(s)	791, 1521, 2129, 3445
OliI	CACNNNNGTG	1 cut(s)	2222
PagI	TCATGA	2 cut(s)	1134, 1216
PceI	AGGCCT	2 cut(s)	248, 799
PciSI	GCTCTTC	3 cut(s)	2285, 2365, 3213
PcsI	WCGNNNNNNNCGW	2 cut(s)	1267, 1615
PctI	GAATGC	1 cut(s)	1257
PdiI	GCCGGC	1 cut(s)	952
PdmI	GAANNNNTTC	1 cut(s)	1255
PfeI	GAWTC	4 cut(s)	1832, 1841, 3844, 3960
PflMI	CCANNNNNTGG	1 cut(s)	3584
PleI	GAGTC	4 cut(s)	328, 575, 2667, 3783
PmaCI	CACGTG	1 cut(s)	1262
PmlI	CACGTG	1 cut(s)	1262
PpsI	GAGTC	4 cut(s)	328, 575, 2667, 3783
Ppu21I	YACGTR	2 cut(s)	1262, 1619
PpuMI	RGGWCCY	1 cut(s)	551
Psp124BI	GAGCTC	1 cut(s)	3225
Psp5II	RGGWCCY	1 cut(s)	551
Psp6I	CCWGG	5 cut(s)	553, 2113, 2248, 2389, 3678
PspCI	CACGTG	1 cut(s)	1262
PspFI	CCCAGC	3 cut(s)	177, 505, 2951
PspGI	CCWGG	5 cut(s)	553, 2113, 2248, 2389, 3678
PspN4I	GGNNCC	1 cut(s)	121
PspPI	GGNCC	3 cut(s)	551, 2387, 3587
PspPPI	RGGWCCY	1 cut(s)	551
PsrI	GAACNNNNNNTAC	2 cut(s)	1315, 1347
PstI	CTGCAG	1 cut(s)	2422
PstNI	CAGNNNCTG	3 cut(s)	2765, 3395, 3999
PsuI	RGATCY	4 cut(s)	466, 826, 2589, 3698
PvuII	CAGCTG	5 cut(s)	1760, 2354, 2456, 2765, 3813
RruI	TCGCGA	1 cut(s)	1278
RsaI	GTAC	7 cut(s)	351, 1333, 2119, 2261, 2331, 2490, 3440
RsaNI	GTAC	7 cut(s)	350, 1332, 2118, 2260, 2330, 2489, 3439
RseI	CAYNNNNRTG	2 cut(s)	686, 2222
SacI	GAGCTC	1 cut(s)	3225
SapI	GCTCTTC	3 cut(s)	2285, 2365, 3213
Sau96I	GGNCC	3 cut(s)	551, 2387, 3587
ScaI	AGTACT	1 cut(s)	1333
SchI	GAGTC	4 cut(s)	329, 575, 2668, 3784
ScrFI	CCNGG	7 cut(s)	555, 1907, 2115, 2250, 2391, 3289, 3680
SduI	GDGCHC	7 cut(s)	40, 122, 280, 1276, 3011, 3225, 3951
SfaNI	GCATC	5 cut(s)	2357, 2667, 2950, 3868, 3980
SfcI	CTRYAG	4 cut(s)	780, 2418, 2970, 4006
SinI	GGWCC	2 cut(s)	551, 3587
SmiMI	CAYNNNNRTG	2 cut(s)	686, 2222
SmlI	CTYRAG	1 cut(s)	52
SmoI	CTYRAG	1 cut(s)	52
SnaBI	TACGTA	1 cut(s)	1619
SpeI	ACTAGT	1 cut(s)	3455
SseBI	AGGCCT	2 cut(s)	248, 799
SsiI	CCGC	4 cut(s)	1222, 1430, 1557, 3515
SspI	AATATT	3 cut(s)	307, 1149, 2512
SspMI	CTAG	8 cut(s)	1902, 2073, 2673, 2724, 2741, 3227, 3456, 3732
SstI	GAGCTC	1 cut(s)	3225
StuI	AGGCCT	2 cut(s)	248, 799
StyD4I	CCNGG	7 cut(s)	553, 1905, 2113, 2248, 2389, 3287, 3678
StyI	CCWWGG	6 cut(s)	24, 1491, 2562, 2640, 3226, 3849
TaiI	ACGT	7 cut(s)	340, 623, 1264, 1621, 2265, 2365, 3506
TaqI	TCGA	4 cut(s)	1609, 2268, 3643, 3958
TaqII	GACCGA	1 cut(s)	3480
TatI	WGTACW	4 cut(s)	349, 1331, 2329, 2488
TfiI	GAWTC	4 cut(s)	1832, 1841, 3844, 3960
TseFI	GTSAC	5 cut(s)	1576, 1675, 1874, 2810, 3918
Tsp45I	GTSAC	5 cut(s)	1576, 1675, 1874, 2810, 3918
TspGWI	ACGGA	3 cut(s)	2856, 3367, 3426
Van91I	CCANNNNNTGG	1 cut(s)	3584
VneI	GTGCAC	2 cut(s)	36, 276
VpaK11BI	GGWCC	2 cut(s)	551, 3587
XapI	RAATTY	6 cut(s)	718, 745, 1753, 2845, 2939, 3017
XceI	RCATGY	4 cut(s)	791, 1521, 2129, 3445
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1384, 2074
XmaJI	CCTAGG	1 cut(s)	3226
XmiI	GTMKAC	2 cut(s)	1060, 3408
XmnI	GAANNNNTTC	1 cut(s)	1255
XspI	CTAG	8 cut(s)	1902, 2073, 2673, 2724, 2741, 3227, 3456, 3732
ZrmI	AGTACT	1 cut(s)	1333
Zsp2I	ATGCAT	1 cut(s)	4020

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.