Rh2BG616800

ATP-dependent RNA helicase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
83879656 .. 83884168
4513 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG616800.1

Sequence Viewer

Length: 1992 bp
ATGAAAATTCGCGATCAGCGTATGGATTTCAGGAGGAATAAGAGGAAGCGAACCAATGAGGATTCTGGAGAAGTCTGTACAAGAGAAGCATTGAAGACGAGAGCATTGCAGAAAAGGAAGCTGAAGAAGTTGCAGGAGCAGAAGGAAAGAGAGCTGCTGTCGAAAAGCGTTGAGGCCTTGGAGAAGTATAAGATTCCAGAGGGTGCACATGCTCTCCTTCAGTCATCGCGGAACGTTGGCCAGGGGCTAGTTTGTGGTAGAAGACTTGACATGAATGCCGGATGTGCAGCTGTCTCACTATCTGAAAATGATATTATTTACACGTATGACACGTCTCTACGGGAAAACACAAATATTTTGTGCACTTCAAGCGTGAATGATGACAGTGAAAGCACAAACTCAATGGTGCATATTGGACAGGATAAGATAAAAGAGAGTCCAAAGCCAAATACGAGCTGGGAAAATGAATTAGCAGATTTTCCTGCACTGAGTTTTCTGAAAGATTCAAAGAATGGGCGGCATATATCAAGACCTCGTGAAGTTATAGATGCAAGGAATGATATTCCCATAGTAATGATGGAGCAAGAGATAATGGAGGCTATAAATGAGCATTCCACTGTAATTATACGCGGAGAGACTGGATGTGGTAAAACAACCCAAGTTCCTCAGTTTCTTTATGAAGTTGGCATCGGTTCAAGCGGGTGCCCTCTTGGAAGTGGTATTATTGGTGTTACTCAACCCCGCTGCATTGCAGTCACTGCAACTGCTAAGCGTGTGGCATATGAGCTTGGCCTACAATTGGAAATCCAGGGTGATTTTTATTTGAAGAGATACTCTGTCATAATTCTTGATGAGGTCCATGAGCGGAGCTTGTGCACAGAGACGCTCATCGGAATGCTTTCAGCTATAATTGGTGTTCGTCAGAAATTATATGAAGATCAGCAGAAGAAATTGCGTCAAGGACTATCAATAGTTCGTGAGAAAAAGATTTTTCCATTGAAGCTTGTGCTCATGAGTGCTACCATGCCAGTGGAAGACTTTAGAAAGATGTTTCCAGATCCCCCACAAGTTATAAATGTTTCGTCCAGACAATTTAAAGTAAGCACTCAGTTCTCAGCGACAACTGAAGGTCATTATATTAATGAAGCATACAAAAAAGTCTTGGAAATTCATAAGACACTGCCTCATGGAGGCATACTTGTCTTTCTCACTGGGCATCGGGAAATAGAGGAATTGTGTCAAAAGCTACGCAGACATTCAAGGAAACTTATTAAAACATCAATTGGAAGTTGTGCCACTGAAGGTCGTGAAATAAACTCTGTTGAGGAAATAAATATGAAGAAAGAAATGGAAGCATTTGACAGTAATGGTAATTCAGCCTTCCATCAAACTGATGGATTTAGCTATAATGATGAAGATCATTGTGAGATAGAGATAGACAAGTATGAGTTGGATTCTATATATGATGCTGAAATAGAGAGTGAGCTAGAAACTATTGGTGATGATAGGGATTCATTATGCCAAGATAAACCAGAAGTTGATGGTAATGTTGCACAAGCTTTACGACAGAATCTGACCATTGCATCACTGAAGGCCTCTTTTGAAGCTTTGGCCAGAAAATCTTCTTCAGACTCTACTTCAGCTTGCAGAGAACCTATCTCATGTACTCTGGATTCTTGCTCCAACCAATCCAATCATAGTTGTAGCTTGGGGACAAAAGGTGGGGTTGAATACCCTGGAAAGCTAGGTTCACTGCGTGTTCTTCCTCTTTATTCCATGCTACCTGCAGCAGCTCAGCGTCATGTATTTGAAAAAGTCAAGGAGGGGGAACGACTTCTTGTTGTGGCGACTAATGTGGCTGAAACCTCTTTAACTATACCTGGGATAAAGTATGTAGTCGACACTGGAAAAGTGAAAGTGAAGGACTACAATTTCTCAAATGGCATGGAAACATATAAAGTACAGTGGATTAGTAAGGCATCAGCTATTTAA

Protein Analysis

663

Amino Acids

74.21

Weight (kDa)

6.58

Isoelectric Point (pI)

44.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Helicase_C PF00271 584 - 636 1.1e-06 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000599)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33390 AT1G33390
fragaria_vesca FvH4_3g40090 FvH4_3g40090 FvH4_3g40090 FvH4_6g48600
malus_domestica MD04G1241500.v1.1 MD05G1017800.v1.1
prunus_persica Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1
pyrus_communis pycom04g21310 pycom05g01000 pycom05g01050 pycom11g20470
rosa_chinensis RchiOBHm_Chr2g0168421 RchiOBHm_Chr2g0168431 RchiOBHm_Chr2g0168441 RchiOBHm_Chr2g0168451 RchiOBHm_Chr2g0168461 RchiOBHm_Chr4g0407811 RchiOBHm_Chr7g0220161 RchiOBHm_Chr7g0220171 RchiOBHm_Chr7g0220481
rosa_laevigata RLG00000002253 RLG00000008696 RLG00000021781
rosa_multiflora Rmu_co8232135.1_g000001 Rmu_sc0000966.1_g000007 Rmu_sc0003573.1_g000032 Rmu_sc0006361.1_g000012 Rmu_sc0006361.1_g000013 Rmu_sc0012607.1_g000001 Rmu_sc0016657.1_g000009
rosa_roxburghii Rroxscaffold_2G00083000 Rroxscaffold_2G00083010 Rroxscaffold_3G00239750 Rroxscaffold_5G00352370
rosa_rugosa Rorug02G0533800 Rorug02G0533800 Rorug04G0081400 Rorug07G0189900 Rorug07G0190000
rosa_samantha Rh2AG603500 Rh2AG603700 Rh2BG616600 Rh2BG616700 Rh2BG616800 Rh2CG584500 Rh2CG584600 Rh2CG584700 Rh2DG627100 Rh2DG627200 Rh4AG146500 Rh4BG144000 Rh4CG153000 Rh4DG140500 Rh7AG332900 Rh7BG324300 Rh7BG324400 Rh7BG324500 Rh7CG350400 Rh7DG329000
rosa_wichuraiana Rw0G022710 Rw2G050050 Rw4G011990 Rw7G028060 Rw7G028070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1073
Acc36I ACCTGC 1 cut(s) 1792
AccB1I GGYRCC 1 cut(s) 702
AccBSI CCGCTC 1 cut(s) 865
AccI GTMKAC 1 cut(s) 1899
AccII CGCG 3 cut(s) 12, 229, 630
AciI CCGC 6 cut(s) 229, 517, 630, 699, 742, 865
AclI AACGTT 1 cut(s) 234
AclWI GGATC 1 cut(s) 1052
AcoI YGGCCR 2 cut(s) 238, 1611
AcsI RAATTY 2 cut(s) 6, 1167
AcuI CTGAAG 7 cut(s) 143, 203, 1146, 1320, 1610, 1611, 1623
AdeI CACNNNGTG 1 cut(s) 1757
AfaI GTAC 3 cut(s) 79, 1666, 1962
AfiI CCNNNNNNNGG 2 cut(s) 799, 1190
AflIII ACRYGT 2 cut(s) 321, 330
AjiI CACGTC 1 cut(s) 333
AjnI CCWGG 4 cut(s) 240, 807, 1735, 1879
Alw21I GWGCWC 4 cut(s) 208, 365, 878, 1011
Alw26I GTCTC 4 cut(s) 298, 339, 629, 875
Alw44I GTGCAC 3 cut(s) 204, 361, 874
AlwI GGATC 1 cut(s) 1052
AlwNI CAGNNNCTG 2 cut(s) 758, 1573
AoxI GGCC 5 cut(s) 174, 238, 790, 1593, 1611
ApaLI GTGCAC 3 cut(s) 204, 361, 874
ApeKI GCWGC 5 cut(s) 154, 287, 744, 1787, 1790
ApoI RAATTY 2 cut(s) 6, 1167
AseI ATTAAT 1 cut(s) 1140
Asp700I GAANNNNTTC 3 cut(s) 898, 1621, 1833
AspS9I GGNCC 1 cut(s) 856
AsuHPI GGTGA 2 cut(s) 824, 1511
AvaII GGWCC 1 cut(s) 856
BaeGI GKGCMC 4 cut(s) 208, 365, 707, 878
BalI TGGCCA 2 cut(s) 240, 1613
BanI GGYRCC 1 cut(s) 702
BauI CACGAG 1 cut(s) 534
BbsI GAAGAC 3 cut(s) 101, 268, 1041
Bbv12I GWGCWC 4 cut(s) 208, 365, 878, 1011
BbvI GCAGC 5 cut(s) 141, 299, 731, 1799, 1802
BccI CCATC 4 cut(s) 571, 1388, 1392, 1535
BcgI CGANNNNNNTGC 2 cut(s) 88, 122
BciT130I CCWGG 4 cut(s) 242, 809, 1737, 1881
BcoDI GTCTC 4 cut(s) 298, 339, 629, 875
BfaI CTAG 3 cut(s) 248, 1487, 1745
BfmI CTRYAG 1 cut(s) 1785
BfuAI ACCTGC 1 cut(s) 1792
BisI GCNGC 6 cut(s) 155, 288, 518, 745, 1788, 1791
BlpI GCTNAGC 2 cut(s) 768, 1794
BlsI GCNGC 6 cut(s) 156, 289, 519, 746, 1789, 1792
Bme1390I CCNGG 4 cut(s) 242, 809, 1737, 1881
Bme18I GGWCC 1 cut(s) 856
BmgBI CACGTC 1 cut(s) 333
BmgT120I GGNCC 1 cut(s) 856
BmiI GGNNCC 1 cut(s) 704
BmrFI CCNGG 4 cut(s) 242, 809, 1737, 1881
BmrI ACTGGG 1 cut(s) 1221
BmsI GCATC 6 cut(s) 538, 696, 1225, 1456, 1592, 1988
BmuI ACTGGG 1 cut(s) 1221
BpiI GAAGAC 3 cut(s) 101, 268, 1041
BpmI CTGGAG 1 cut(s) 87
Bpu1102I GCTNAGC 2 cut(s) 768, 1794
BsaAI YACGTR 1 cut(s) 324
BsaBI GATNNNNATC 1 cut(s) 1416
BsaJI CCNNGG 5 cut(s) 177, 241, 808, 1735, 1880
BsaXI ACNNNNNCTCC 2 cut(s) 198, 228
Bsc4I CCNNNNNNNGG 2 cut(s) 799, 1190
Bse1I ACTGG 4 cut(s) 643, 1028, 1216, 1909
Bse3DI GCAATG 3 cut(s) 104, 747, 1578
Bse8I GATNNNNATC 1 cut(s) 1416
BseBI CCWGG 4 cut(s) 242, 809, 1737, 1881
BseDI CCNNGG 5 cut(s) 177, 241, 808, 1735, 1880
BseGI GGATG 2 cut(s) 287, 647
BseJI GATNNNNATC 1 cut(s) 1416
BseLI CCNNNNNNNGG 2 cut(s) 799, 1190
BseMI GCAATG 3 cut(s) 104, 747, 1578
BseMII CTCAG 5 cut(s) 479, 680, 1121, 1128, 1808
BseNI ACTGG 4 cut(s) 643, 1028, 1216, 1909
BseSI GKGCMC 4 cut(s) 208, 365, 707, 878
BseXI GCAGC 5 cut(s) 141, 299, 731, 1799, 1802
BseYI CCCAGC 1 cut(s) 456
BsgI GTGCAG 2 cut(s) 306, 468
Bsh1236I CGCG 3 cut(s) 12, 229, 630
BshFI GGCC 5 cut(s) 176, 240, 792, 1595, 1613
BshNI GGYRCC 1 cut(s) 702
BsiHKAI GWGCWC 4 cut(s) 208, 365, 878, 1011
BsiSI CCGG 1 cut(s) 279
BslFI GGGAC 1 cut(s) 1726
BslI CCNNNNNNNGG 2 cut(s) 799, 1190
BsmAI GTCTC 4 cut(s) 298, 339, 629, 875
BsmBI CGTCTC 2 cut(s) 339, 875
BsmFI GGGAC 1 cut(s) 1726
BsmI GAATGC 3 cut(s) 280, 610, 900
BsnI GGCC 5 cut(s) 176, 240, 792, 1595, 1613
Bsp1286I GDGCHC 5 cut(s) 208, 365, 707, 878, 1011
Bsp1407I TGTACA 1 cut(s) 77
Bsp143I GATC 4 cut(s) 13, 937, 1057, 1417
Bsp1720I GCTNAGC 2 cut(s) 768, 1794
Bsp68I TCGCGA 1 cut(s) 12
BspACI CCGC 6 cut(s) 229, 517, 630, 699, 742, 865
BspANI GGCC 5 cut(s) 176, 240, 792, 1595, 1613
BspCNI CTCAG 5 cut(s) 480, 679, 1120, 1127, 1807
BspFNI CGCG 3 cut(s) 12, 229, 630
BspHI TCATGA 1 cut(s) 1011
BspLI GGNNCC 1 cut(s) 704
BspMAI CTGCAG 1 cut(s) 1789
BspMI ACCTGC 1 cut(s) 1792
BspPI GGATC 1 cut(s) 1052
BspT107I GGYRCC 1 cut(s) 702
BsrBI CCGCTC 1 cut(s) 865
BsrDI GCAATG 3 cut(s) 104, 747, 1578
BsrGI TGTACA 1 cut(s) 77
BsrI ACTGG 4 cut(s) 643, 1028, 1216, 1909
BssECI CCNNGG 5 cut(s) 177, 241, 808, 1735, 1880
BssMI GATC 4 cut(s) 13, 937, 1057, 1417
BssSI CACGAG 1 cut(s) 534
BssT1I CCWWGG 1 cut(s) 177
Bst2BI CACGAG 1 cut(s) 534
Bst2UI CCWGG 4 cut(s) 242, 809, 1737, 1881
Bst4CI ACNGT 4 cut(s) 386, 619, 1364, 1965
Bst6I CTCTTC 1 cut(s) 821
BstAPI GCANNNNNTGC 1 cut(s) 758
BstAUI TGTACA 1 cut(s) 77
BstBAI YACGTR 1 cut(s) 324
BstC8I GCNNGC 1 cut(s) 1645
BstDEI CTNAG 6 cut(s) 488, 666, 768, 1107, 1114, 1794
BstENI CCTNNNNNAGG 1 cut(s) 1188
BstF5I GGATG 2 cut(s) 287, 647
BstFNI CGCG 3 cut(s) 12, 229, 630
BstKTI GATC 4 cut(s) 16, 940, 1060, 1420
BstMAI GTCTC 4 cut(s) 298, 339, 629, 875
BstMBI GATC 4 cut(s) 13, 937, 1057, 1417
BstMWI GCNNNNNNNGC 3 cut(s) 284, 369, 758
BstNI CCWGG 4 cut(s) 242, 809, 1737, 1881
BstNSI RCATGY 1 cut(s) 212
BstSCI CCNGG 4 cut(s) 240, 807, 1735, 1879
BstSFI CTRYAG 1 cut(s) 1785
BstSLI GKGCMC 4 cut(s) 208, 365, 707, 878
BstUI CGCG 3 cut(s) 12, 229, 630
BstV1I GCAGC 5 cut(s) 141, 299, 731, 1799, 1802
BstV2I GAAGAC 3 cut(s) 101, 268, 1041
BstX2I RGATCY 1 cut(s) 1057
BstXI CCANNNNNNTGG 1 cut(s) 1030
BstYI RGATCY 1 cut(s) 1057
BsuRI GGCC 5 cut(s) 176, 240, 792, 1595, 1613
BtgZI GCGATG 1 cut(s) 210
BtrI CACGTC 1 cut(s) 333
BtsCI GGATG 2 cut(s) 287, 647
BtsI GCAGTG 3 cut(s) 756, 1178, 1751
BtuMI TCGCGA 1 cut(s) 12
BveI ACCTGC 1 cut(s) 1792
Cac8I GCNNGC 1 cut(s) 1645
CaiI CAGNNNCTG 2 cut(s) 758, 1573
CciI TCATGA 1 cut(s) 1011
Cfr13I GGNCC 1 cut(s) 856
CseI GACGC 3 cut(s) 892, 944, 1787
Csp6I GTAC 3 cut(s) 78, 1665, 1961
CviQI GTAC 3 cut(s) 78, 1665, 1961
DdeI CTNAG 6 cut(s) 488, 666, 768, 1107, 1114, 1794
DpnI GATC 4 cut(s) 15, 939, 1059, 1419
DpnII GATC 4 cut(s) 13, 937, 1057, 1417
DraI TTTAAA 1 cut(s) 1096
DraIII CACNNNGTG 1 cut(s) 1757
EaeI YGGCCR 2 cut(s) 238, 1611
Eam1104I CTCTTC 1 cut(s) 821
EarI CTCTTC 1 cut(s) 821
Eco130I CCWWGG 1 cut(s) 177
Eco147I AGGCCT 2 cut(s) 176, 1595
Eco47I GGWCC 1 cut(s) 856
Eco57I CTGAAG 7 cut(s) 143, 203, 1146, 1320, 1610, 1611, 1623
EcoNI CCTNNNNNAGG 1 cut(s) 1188
EcoRII CCWGG 4 cut(s) 240, 807, 1735, 1879
EcoT14I CCWWGG 1 cut(s) 177
ErhI CCWWGG 1 cut(s) 177
Esp3I CGTCTC 2 cut(s) 339, 875
FaqI GGGAC 1 cut(s) 1726
FauI CCCGC 2 cut(s) 692, 749
FauNDI CATATG 1 cut(s) 781
FblI GTMKAC 1 cut(s) 1899
Fnu4HI GCNGC 6 cut(s) 155, 288, 518, 745, 1788, 1791
FokI GGATG 2 cut(s) 294, 654
Fsp4HI GCNGC 6 cut(s) 155, 288, 518, 745, 1788, 1791
FspBI CTAG 3 cut(s) 248, 1487, 1745
GluI GCNGC 6 cut(s) 155, 288, 518, 745, 1788, 1791
GsaI CCCAGC 1 cut(s) 460
GsuI CTGGAG 1 cut(s) 87
HaeIII GGCC 5 cut(s) 176, 240, 792, 1595, 1613
HapII CCGG 1 cut(s) 279
HgaI GACGC 3 cut(s) 892, 944, 1787
HincII GTYRAC 1 cut(s) 1900
HindII GTYRAC 1 cut(s) 1900
HindIII AAGCTT 3 cut(s) 1001, 1557, 1605
HinfI GANTC 9 cut(s) 62, 193, 436, 503, 1454, 1511, 1570, 1631, 1673
HpaII CCGG 1 cut(s) 279
HphI GGTGA 2 cut(s) 824, 1511
Hpy166II GTNNAC 5 cut(s) 206, 363, 876, 1751, 1900
Hpy188I TCNGA 6 cut(s) 304, 498, 893, 924, 1575, 1630
Hpy8I GTNNAC 5 cut(s) 206, 363, 876, 1751, 1900
HpyAV CCTTC 7 cut(s) 136, 227, 1121, 1295, 1390, 1585, 1915
HpyCH4III ACNGT 4 cut(s) 386, 619, 1364, 1965
HpyCH4IV ACGT 3 cut(s) 234, 323, 332
HpyF10VI GCNNNNNNNGC 3 cut(s) 284, 369, 758
HpyF3I CTNAG 6 cut(s) 488, 666, 768, 1107, 1114, 1794
HpySE526I ACGT 3 cut(s) 234, 323, 332
Kzo9I GATC 4 cut(s) 13, 937, 1057, 1417
LmnI GCTCC 4 cut(s) 136, 580, 867, 1685
Lsp1109I GCAGC 5 cut(s) 141, 299, 731, 1799, 1802
LweI GCATC 6 cut(s) 538, 696, 1225, 1456, 1592, 1988
MaeI CTAG 3 cut(s) 248, 1487, 1745
MaeII ACGT 3 cut(s) 234, 323, 332
MaeIII GTNAC 2 cut(s) 730, 754
MalI GATC 4 cut(s) 15, 939, 1059, 1419
MbiI CCGCTC 1 cut(s) 865
MboI GATC 4 cut(s) 13, 937, 1057, 1417
MfeI CAATTG 2 cut(s) 797, 1281
MflI RGATCY 1 cut(s) 1057
MhlI GDGCHC 5 cut(s) 208, 365, 707, 878, 1011
MlsI TGGCCA 2 cut(s) 240, 1613
MluNI TGGCCA 2 cut(s) 240, 1613
MlyI GAGTC 2 cut(s) 445, 1625
MmeI TCCRAC 2 cut(s) 1431, 1707
Mox20I TGGCCA 2 cut(s) 240, 1613
MroXI GAANNNNTTC 3 cut(s) 898, 1621, 1833
MscI TGGCCA 2 cut(s) 240, 1613
MseI TTAA 5 cut(s) 1095, 1140, 1272, 1871, 1990
MslI CAYNNNNRTG 3 cut(s) 572, 893, 1028
Msp20I TGGCCA 2 cut(s) 240, 1613
MspA1I CMGCKG 2 cut(s) 290, 744
MspI CCGG 1 cut(s) 279
MspR9I CCNGG 4 cut(s) 242, 809, 1737, 1881
MunI CAATTG 2 cut(s) 797, 1281
Mva1269I GAATGC 3 cut(s) 280, 610, 900
MvaI CCWGG 4 cut(s) 242, 809, 1737, 1881
MvnI CGCG 3 cut(s) 12, 229, 630
MwoI GCNNNNNNNGC 3 cut(s) 284, 369, 758
NdeI CATATG 1 cut(s) 781
NdeII GATC 4 cut(s) 13, 937, 1057, 1417
NlaIV GGNNCC 1 cut(s) 704
NmuCI GTSAC 1 cut(s) 754
NruI TCGCGA 1 cut(s) 12
NspI RCATGY 1 cut(s) 212
PagI TCATGA 1 cut(s) 1011
PceI AGGCCT 2 cut(s) 176, 1595
PcsI WCGNNNNNNNCGW 2 cut(s) 16, 329
PctI GAATGC 3 cut(s) 280, 610, 900
PdmI GAANNNNTTC 3 cut(s) 898, 1621, 1833
PfeI GAWTC 7 cut(s) 62, 193, 503, 1454, 1511, 1570, 1673
PkrI GCNGC 6 cut(s) 156, 289, 519, 746, 1789, 1792
PleI GAGTC 2 cut(s) 444, 1625
PpsI GAGTC 2 cut(s) 444, 1625
Ppu21I YACGTR 1 cut(s) 324
PshBI ATTAAT 1 cut(s) 1140
PsiI TTATAA 1 cut(s) 1073
Psp1406I AACGTT 1 cut(s) 234
Psp6I CCWGG 4 cut(s) 240, 807, 1735, 1879
PspFI CCCAGC 1 cut(s) 456
PspGI CCWGG 4 cut(s) 240, 807, 1735, 1879
PspN4I GGNNCC 1 cut(s) 704
PspPI GGNCC 1 cut(s) 856
PstI CTGCAG 1 cut(s) 1789
PstNI CAGNNNCTG 2 cut(s) 758, 1573
PsuI RGATCY 1 cut(s) 1057
PvuII CAGCTG 1 cut(s) 290
RruI TCGCGA 1 cut(s) 12
RsaI GTAC 3 cut(s) 79, 1666, 1962
RsaNI GTAC 3 cut(s) 78, 1665, 1961
RseI CAYNNNNRTG 3 cut(s) 572, 893, 1028
SalI GTCGAC 1 cut(s) 1898
SaqAI TTAA 5 cut(s) 1095, 1140, 1272, 1871, 1990
SatI GCNGC 6 cut(s) 155, 288, 518, 745, 1788, 1791
Sau3AI GATC 4 cut(s) 13, 937, 1057, 1417
Sau96I GGNCC 1 cut(s) 856
SchI GAGTC 2 cut(s) 445, 1625
ScrFI CCNGG 4 cut(s) 242, 809, 1737, 1881
SduI GDGCHC 5 cut(s) 208, 365, 707, 878, 1011
SfaNI GCATC 6 cut(s) 538, 696, 1225, 1456, 1592, 1988
SfcI CTRYAG 1 cut(s) 1785
SinI GGWCC 1 cut(s) 856
SmiMI CAYNNNNRTG 3 cut(s) 572, 893, 1028
SseBI AGGCCT 2 cut(s) 176, 1595
SsiI CCGC 6 cut(s) 229, 517, 630, 699, 742, 865
SspI AATATT 1 cut(s) 355
SspMI CTAG 3 cut(s) 248, 1487, 1745
StuI AGGCCT 2 cut(s) 176, 1595
StyD4I CCNGG 4 cut(s) 240, 807, 1735, 1879
StyI CCWWGG 1 cut(s) 177
TaaI ACNGT 4 cut(s) 386, 619, 1364, 1965
TaiI ACGT 3 cut(s) 237, 326, 335
TaqI TCGA 2 cut(s) 161, 1899
TatI WGTACW 3 cut(s) 77, 1664, 1960
TauI GCSGC 1 cut(s) 520
TfiI GAWTC 7 cut(s) 62, 193, 503, 1454, 1511, 1570, 1673
Tru1I TTAA 5 cut(s) 1095, 1140, 1272, 1871, 1990
Tru9I TTAA 5 cut(s) 1095, 1140, 1272, 1871, 1990
TseFI GTSAC 1 cut(s) 754
TseI GCWGC 5 cut(s) 154, 287, 744, 1787, 1790
Tsp45I GTSAC 1 cut(s) 754
VneI GTGCAC 3 cut(s) 204, 361, 874
VpaK11BI GGWCC 1 cut(s) 856
VspI ATTAAT 1 cut(s) 1140
XagI CCTNNNNNAGG 1 cut(s) 1188
XapI RAATTY 2 cut(s) 6, 1167
XceI RCATGY 1 cut(s) 212
XcmI CCANNNNNNNNNTGG 3 cut(s) 453, 574, 1391
XmiI GTMKAC 1 cut(s) 1899
XmnI GAANNNNTTC 3 cut(s) 898, 1621, 1833
XspI CTAG 3 cut(s) 248, 1487, 1745
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.