Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2C

Orthogroup ID

OG0000599

Physical Location & Seq

Genomic Coordinates Reverse (-)

76201347 .. 76203478

Gene Structure 2132 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2CG584600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGCTTTCAGCTATAATTGGTGTTCGTCAGAAATTATATGAAGATCAGCAGAAGAAATTGCGTCAAGGACTATCAATAGTTCGTGAGAAAAAGATTTTTCCATTGAAGCTTGTGCTCATGAGTGCTACCATGCCAGTGGAAGACTTTAGAAAGATGTTTCCAGATCCCCCACAAGTTATAAATGTTTCGTCCAGACAATTTAAAGTAAGCACTCAGTTCTCAGCGACAAATGAAGGTCATTATATTAATGAAGCATACAAAAAAGTCTTGGAAATTCATAAGACACTGCCTCATGGAGGCATACTTGTCCTTCTCACTGGGTATCGGGAAACAGAGGAATTGTGTCAAAAGCTACGCAGACATTCAAGGAAACTTATTAAAACATCAATTGGAAGTTGTGCCACTGAAGGTCGTGAAATAAACTCTGTTGAGGAAATAAATATAAAGAAAGAAATGGAAGCATTTGACAGTAATGGTAATTCAGCCTTCCATCAAACTGATGGATTTAGCTATAATGATGAAGATCATTGTGAGATAGACAAGTATGAGTTGGATTCTATATATGATGCAGAAATAGAGAGTGAGTTAGAAACTATTGGTGATGATAGGGATTCATTATGCGAAGATAAACCAGAAGTTGATGGTAATGTTGCACAAGCTTTACGACAGAATCTGACCATTGCATCACTGAAGGCCTCTTTTGAAGCTTTGGCCAGAAAATCTTCTTCAGACTCTACTTCAGCTTGCAGAGAACCTATCTCATGTACTCTGGATTCTTGCTCTAACCAATCCAATCATAGTTGTAGCTTGGGGACAAAAGGTGGGGTTGAATACCCTGGAAAGCTAGGTTCACTGCGAGTTCTTCCTCTTTATTCCATGCTTCCTGCAGCAGCTCAGCGTCATGTATTTGAAAAAGTCAAGGAGGGGGAACGACTTCTTGTTGTGGTGACTAATGTGGCCGAAACCTCTTTAACTATACCTGGGATAAAGTATGTAGTCGACACTGGAAAAGTGAAAGTGAAGGACTACAATTTCTCAAATGGCATGGAAACATATAAAGTACAGTGGATTAGTAAGGCATCAGCTATTCAACGCGAAGGAAGAGCTGGAAGAACAGGGCCTTTTCTTGACTGTTCCGAAGCTGAAATATCCAAAGTCCCTGTTGATGGTGTTCTCCTTCTTATGAAGGCTATGAAAATACCGGTATCCAAATTTCAGTTTCCTACTCCTCCAAATGGTGATACTATTGATGAAGCAGAGGATCGTTTGAAGCTCCTCAAAGCACTTGATAGCAATGGAGAGGTGACACCTTTAGGGAAGGCCATGGCTTATTACCCCATAAGTCCTTGCCAATCTAAGATGCTCCTTACGGTCATTGAAATCCTGAATATGAAGCAAAGTTATTCCCGAGCTAATTTAGTGCTAGCATATGCAGTTGCAGCAGCTGCAGCTTTGAGTGTGTCTAATCCTTTTGACAGTCCATTTGAAGATAGTCACATAAAAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010467 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD HA2 Helicase_C OB_NTP_bind

Protein Analysis

502

Amino Acids

55.63

Weight (kDa)

6.08

Isoelectric Point (pI)

42.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Helicase_C	PF00271	284 - 373	7.7e-10	Helicase conserved C-terminal domain
WHD_HA2	PF04408	419 - 447	1.3e-07	Helicase associated domain (HA2), winged-helix

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000599)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33390 AT1G33390
fragaria_vesca	FvH4_3g40090 FvH4_3g40090 FvH4_3g40090 FvH4_6g48600
malus_domestica	MD04G1241500.v1.1 MD05G1017800.v1.1
prunus_persica	Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1
pyrus_communis	pycom04g21310 pycom05g01000 pycom05g01050 pycom11g20470
rosa_chinensis	RchiOBHm_Chr2g0168421 RchiOBHm_Chr2g0168431 RchiOBHm_Chr2g0168441 RchiOBHm_Chr2g0168451 RchiOBHm_Chr2g0168461 RchiOBHm_Chr4g0407811 RchiOBHm_Chr7g0220161 RchiOBHm_Chr7g0220171 RchiOBHm_Chr7g0220481
rosa_laevigata	RLG00000002253 RLG00000008696 RLG00000021781
rosa_multiflora	Rmu_co8232135.1_g000001 Rmu_sc0000966.1_g000007 Rmu_sc0003573.1_g000032 Rmu_sc0006361.1_g000012 Rmu_sc0006361.1_g000013 Rmu_sc0012607.1_g000001 Rmu_sc0016657.1_g000009
rosa_roxburghii	Rroxscaffold_2G00083000 Rroxscaffold_2G00083010 Rroxscaffold_3G00239750 Rroxscaffold_5G00352370
rosa_rugosa	Rorug02G0533800 Rorug02G0533800 Rorug04G0081400 Rorug07G0189900 Rorug07G0190000
rosa_samantha	Rh2AG603500 Rh2AG603700 Rh2BG616600 Rh2BG616700 Rh2BG616800 Rh2CG584500 Rh2CG584600 Rh2CG584700 Rh2DG627100 Rh2DG627200 Rh4AG146500 Rh4BG144000 Rh4CG153000 Rh4DG140500 Rh7AG332900 Rh7BG324300 Rh7BG324400 Rh7BG324500 Rh7CG350400 Rh7DG329000
rosa_wichuraiana	Rw0G022710 Rw2G050050 Rw4G011990 Rw7G028060 Rw7G028070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	179
AccI	GTMKAC	1 cut(s)	999
AccII	CGCG	1 cut(s)	1095
AclWI	GGATC	2 cut(s)	158, 1269
AcoI	YGGCCR	2 cut(s)	711, 957
AcsI	RAATTY	2 cut(s)	273, 1211
AcuI	CTGAAG	4 cut(s)	426, 710, 711, 723
AfaI	GTAC	2 cut(s)	766, 1062
AfiI	CCNNNNNNNGG	3 cut(s)	296, 1166, 1235
AgeI	ACCGGT	1 cut(s)	1201
AgsI	TTSAA	9 cut(s)	106, 366, 704, 830, 911, 1091, 1270, 1379, 1487
AjnI	CCWGG	2 cut(s)	835, 979
Alw21I	GWGCWC	1 cut(s)	117
AlwI	GGATC	2 cut(s)	158, 1269
AlwNI	CAGNNNCTG	2 cut(s)	673, 1445
Ama87I	CYCGRG	1 cut(s)	1407
AoxI	GGCC	5 cut(s)	693, 711, 957, 1118, 1320
ApeKI	GCWGC	6 cut(s)	887, 890, 1439, 1442, 1445, 1448
ApoI	RAATTY	2 cut(s)	273, 1211
ArsI	GACNNNNNNTTYG	2 cut(s)	1466, 1498
AseI	ATTAAT	1 cut(s)	246
AsiGI	ACCGGT	1 cut(s)	1201
Asp700I	GAANNNNTTC	2 cut(s)	721, 933
AspS9I	GGNCC	1 cut(s)	1118
AsuHPI	GGTGA	4 cut(s)	611, 958, 1250, 1315
AsuNHI	GCTAGC	1 cut(s)	1423
AvaI	CYCGRG	1 cut(s)	1407
BalI	TGGCCA	1 cut(s)	713
BbsI	GAAGAC	1 cut(s)	147
Bbv12I	GWGCWC	1 cut(s)	117
BbvI	GCAGC	6 cut(s)	899, 902, 1432, 1451, 1454, 1460
BccI	CCATC	4 cut(s)	494, 498, 635, 1160
BciT130I	CCWGG	2 cut(s)	837, 981
BciVI	GTATCC	1 cut(s)	1216
BfaI	CTAG	2 cut(s)	845, 1424
BfmI	CTRYAG	2 cut(s)	885, 1446
BfuI	GTATCC	1 cut(s)	1216
BisI	GCNGC	6 cut(s)	888, 891, 1440, 1443, 1446, 1449
BlpI	GCTNAGC	1 cut(s)	894
BlsI	GCNGC	6 cut(s)	889, 892, 1441, 1444, 1447, 1450
Bme1390I	CCNGG	2 cut(s)	837, 981
BmeT110I	CYCGRG	1 cut(s)	1407
BmgT120I	GGNCC	1 cut(s)	1118
BmrFI	CCNGG	2 cut(s)	837, 981
BmrI	ACTGGG	1 cut(s)	327
BmsI	GCATC	4 cut(s)	556, 692, 1088, 1350
BmtI	GCTAGC	1 cut(s)	1427
BmuI	ACTGGG	1 cut(s)	327
BpiI	GAAGAC	1 cut(s)	147
Bpu1102I	GCTNAGC	1 cut(s)	894
BsaBI	GATNNNNATC	1 cut(s)	522
BsaJI	CCNNGG	3 cut(s)	835, 980, 1323
BsaWI	WCCGGW	1 cut(s)	1201
Bsc4I	CCNNNNNNNGG	3 cut(s)	296, 1166, 1235
Bse118I	RCCGGY	1 cut(s)	1201
Bse1I	ACTGG	3 cut(s)	134, 322, 1009
Bse3DI	GCAATG	2 cut(s)	678, 1300
Bse8I	GATNNNNATC	1 cut(s)	522
BseBI	CCWGG	2 cut(s)	837, 981
BseDI	CCNNGG	3 cut(s)	835, 980, 1323
BseJI	GATNNNNATC	1 cut(s)	522
BseLI	CCNNNNNNNGG	3 cut(s)	296, 1166, 1235
BseMI	GCAATG	2 cut(s)	678, 1300
BseMII	CTCAG	3 cut(s)	227, 234, 908
BseNI	ACTGG	3 cut(s)	134, 322, 1009
BseRI	GAGGAG	2 cut(s)	1218, 1265
BseXI	GCAGC	6 cut(s)	899, 902, 1432, 1451, 1454, 1460
Bsh1236I	CGCG	1 cut(s)	1095
BshFI	GGCC	5 cut(s)	695, 713, 959, 1120, 1322
BshTI	ACCGGT	1 cut(s)	1201
BsiHKAI	GWGCWC	1 cut(s)	117
BsiHKCI	CYCGRG	1 cut(s)	1407
BsiSI	CCGG	1 cut(s)	1202
BslFI	GGGAC	2 cut(s)	826, 1142
BslI	CCNNNNNNNGG	3 cut(s)	296, 1166, 1235
BsmFI	GGGAC	2 cut(s)	826, 1142
BsnI	GGCC	5 cut(s)	695, 713, 959, 1120, 1322
BsoBI	CYCGRG	1 cut(s)	1407
Bsp1286I	GDGCHC	1 cut(s)	117
Bsp143I	GATC	4 cut(s)	43, 163, 523, 1261
Bsp1720I	GCTNAGC	1 cut(s)	894
Bsp19I	CCATGG	1 cut(s)	1323
BspANI	GGCC	5 cut(s)	695, 713, 959, 1120, 1322
BspCNI	CTCAG	3 cut(s)	226, 233, 907
BspFNI	CGCG	1 cut(s)	1095
BspHI	TCATGA	1 cut(s)	117
BspMAI	CTGCAG	2 cut(s)	889, 1450
BspOI	GCTAGC	1 cut(s)	1427
BspPI	GGATC	2 cut(s)	158, 1269
BspQI	GCTCTTC	1 cut(s)	1096
BsrDI	GCAATG	2 cut(s)	678, 1300
BsrFI	RCCGGY	1 cut(s)	1201
BsrI	ACTGG	3 cut(s)	134, 322, 1009
BssAI	RCCGGY	1 cut(s)	1201
BssECI	CCNNGG	3 cut(s)	835, 980, 1323
BssMI	GATC	4 cut(s)	43, 163, 523, 1261
BssT1I	CCWWGG	1 cut(s)	1323
Bst2UI	CCWGG	2 cut(s)	837, 981
Bst4CI	ACNGT	5 cut(s)	470, 1065, 1133, 1372, 1478
Bst6I	CTCTTC	1 cut(s)	1096
BstAPI	GCANNNNNTGC	1 cut(s)	1445
BstC8I	GCNNGC	2 cut(s)	745, 1425
BstDEI	CTNAG	4 cut(s)	213, 220, 894, 1356
BstDSI	CCRYGG	1 cut(s)	1323
BstENI	CCTNNNNNAGG	1 cut(s)	294
BstFNI	CGCG	1 cut(s)	1095
BstKTI	GATC	4 cut(s)	46, 166, 526, 1264
BstMBI	GATC	4 cut(s)	43, 163, 523, 1261
BstMWI	GCNNNNNNNGC	3 cut(s)	1439, 1445, 1448
BstNI	CCWGG	2 cut(s)	837, 981
BstSCI	CCNGG	2 cut(s)	835, 979
BstSFI	CTRYAG	2 cut(s)	885, 1446
BstUI	CGCG	1 cut(s)	1095
BstV1I	GCAGC	6 cut(s)	899, 902, 1432, 1451, 1454, 1460
BstV2I	GAAGAC	1 cut(s)	147
BstX2I	RGATCY	1 cut(s)	163
BstXI	CCANNNNNNTGG	1 cut(s)	136
BstYI	RGATCY	1 cut(s)	163
BsuI	GTATCC	1 cut(s)	1216
BsuRI	GGCC	5 cut(s)	695, 713, 959, 1120, 1322
BtgI	CCRYGG	1 cut(s)	1323
BtsI	GCAGTG	2 cut(s)	284, 851
BtsIMutI	CAGTG	8 cut(s)	141, 284, 315, 402, 686, 851, 1002, 1070
Cac8I	GCNNGC	2 cut(s)	745, 1425
CaiI	CAGNNNCTG	2 cut(s)	673, 1445
CciI	TCATGA	1 cut(s)	117
Cfr10I	RCCGGY	1 cut(s)	1201
Cfr13I	GGNCC	1 cut(s)	1118
CseI	GACGC	2 cut(s)	50, 887
Csp6I	GTAC	2 cut(s)	765, 1061
CspAI	ACCGGT	1 cut(s)	1201
CviAII	CATG	8 cut(s)	118, 130, 293, 762, 877, 902, 1045, 1324
CviQI	GTAC	2 cut(s)	765, 1061
DdeI	CTNAG	4 cut(s)	213, 220, 894, 1356
DpnI	GATC	4 cut(s)	45, 165, 525, 1263
DpnII	GATC	4 cut(s)	43, 163, 523, 1261
DraI	TTTAAA	1 cut(s)	202
EaeI	YGGCCR	2 cut(s)	711, 957
Eam1104I	CTCTTC	1 cut(s)	1096
EarI	CTCTTC	1 cut(s)	1096
Eco130I	CCWWGG	1 cut(s)	1323
Eco147I	AGGCCT	1 cut(s)	695
Eco57I	CTGAAG	4 cut(s)	426, 710, 711, 723
Eco88I	CYCGRG	1 cut(s)	1407
EcoNI	CCTNNNNNAGG	1 cut(s)	294
EcoO109I	RGGNCCY	1 cut(s)	1118
EcoRII	CCWGG	2 cut(s)	835, 979
EcoT14I	CCWWGG	1 cut(s)	1323
ErhI	CCWWGG	1 cut(s)	1323
FaeI	CATG	8 cut(s)	121, 133, 296, 765, 880, 905, 1048, 1327
FaqI	GGGAC	2 cut(s)	826, 1142
FatI	CATG	8 cut(s)	117, 129, 292, 761, 876, 901, 1044, 1323
FauNDI	CATATG	1 cut(s)	1429
FblI	GTMKAC	1 cut(s)	999
Fnu4HI	GCNGC	6 cut(s)	888, 891, 1440, 1443, 1446, 1449
Fsp4HI	GCNGC	6 cut(s)	888, 891, 1440, 1443, 1446, 1449
FspBI	CTAG	2 cut(s)	845, 1424
GluI	GCNGC	6 cut(s)	888, 891, 1440, 1443, 1446, 1449
HaeIII	GGCC	5 cut(s)	695, 713, 959, 1120, 1322
HapII	CCGG	1 cut(s)	1202
HgaI	GACGC	2 cut(s)	50, 887
Hin1II	CATG	8 cut(s)	121, 133, 296, 765, 880, 905, 1048, 1327
HincII	GTYRAC	1 cut(s)	1000
HindII	GTYRAC	1 cut(s)	1000
HindIII	AAGCTT	3 cut(s)	107, 657, 705
HinfI	GANTC	5 cut(s)	554, 611, 670, 731, 773
HpaII	CCGG	1 cut(s)	1202
HphI	GGTGA	4 cut(s)	611, 958, 1250, 1315
Hpy166II	GTNNAC	2 cut(s)	851, 1000
Hpy188I	TCNGA	4 cut(s)	30, 675, 730, 1138
Hpy8I	GTNNAC	2 cut(s)	851, 1000
HpyCH4III	ACNGT	5 cut(s)	470, 1065, 1133, 1372, 1478
HpyCH4V	TGCA	8 cut(s)	569, 653, 683, 747, 887, 1433, 1439, 1448
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1439, 1445, 1448
HpyF3I	CTNAG	4 cut(s)	213, 220, 894, 1356
Hsp92II	CATG	8 cut(s)	121, 133, 296, 765, 880, 905, 1048, 1327
Kzo9I	GATC	4 cut(s)	43, 163, 523, 1261
LguI	GCTCTTC	1 cut(s)	1096
LmnI	GCTCC	2 cut(s)	1278, 1368
Lsp1109I	GCAGC	6 cut(s)	899, 902, 1432, 1451, 1454, 1460
LweI	GCATC	4 cut(s)	556, 692, 1088, 1350
MaeI	CTAG	2 cut(s)	845, 1424
MaeIII	GTNAC	3 cut(s)	946, 1303, 1493
MalI	GATC	4 cut(s)	45, 165, 525, 1263
MboI	GATC	4 cut(s)	43, 163, 523, 1261
MfeI	CAATTG	1 cut(s)	387
MflI	RGATCY	1 cut(s)	163
MhlI	GDGCHC	1 cut(s)	117
MlsI	TGGCCA	1 cut(s)	713
MluNI	TGGCCA	1 cut(s)	713
MlyI	GAGTC	1 cut(s)	725
MmeI	TCCRAC	1 cut(s)	531
Mox20I	TGGCCA	1 cut(s)	713
MroXI	GAANNNNTTC	2 cut(s)	721, 933
MscI	TGGCCA	1 cut(s)	713
MseI	TTAA	4 cut(s)	201, 246, 378, 971
MslI	CAYNNNNRTG	1 cut(s)	134
Msp20I	TGGCCA	1 cut(s)	713
MspA1I	CMGCKG	1 cut(s)	1445
MspI	CCGG	1 cut(s)	1202
MspR9I	CCNGG	2 cut(s)	837, 981
MunI	CAATTG	1 cut(s)	387
MvaI	CCWGG	2 cut(s)	837, 981
MvnI	CGCG	1 cut(s)	1095
MwoI	GCNNNNNNNGC	3 cut(s)	1439, 1445, 1448
NcoI	CCATGG	1 cut(s)	1323
NdeI	CATATG	1 cut(s)	1429
NdeII	GATC	4 cut(s)	43, 163, 523, 1261
NheI	GCTAGC	1 cut(s)	1423
NlaIII	CATG	8 cut(s)	121, 133, 296, 765, 880, 905, 1048, 1327
NmuCI	GTSAC	3 cut(s)	946, 1303, 1493
PagI	TCATGA	1 cut(s)	117
PceI	AGGCCT	1 cut(s)	695
PciSI	GCTCTTC	1 cut(s)	1096
PdmI	GAANNNNTTC	2 cut(s)	721, 933
PfeI	GAWTC	4 cut(s)	554, 611, 670, 773
PinAI	ACCGGT	1 cut(s)	1201
PkrI	GCNGC	6 cut(s)	889, 892, 1441, 1444, 1447, 1450
PleI	GAGTC	1 cut(s)	725
PpsI	GAGTC	1 cut(s)	725
PshBI	ATTAAT	1 cut(s)	246
PsiI	TTATAA	1 cut(s)	179
Psp6I	CCWGG	2 cut(s)	835, 979
PspGI	CCWGG	2 cut(s)	835, 979
PspPI	GGNCC	1 cut(s)	1118
PstI	CTGCAG	2 cut(s)	889, 1450
PstNI	CAGNNNCTG	2 cut(s)	673, 1445
PsuI	RGATCY	1 cut(s)	163
PvuII	CAGCTG	1 cut(s)	1445
RsaI	GTAC	2 cut(s)	766, 1062
RsaNI	GTAC	2 cut(s)	765, 1061
RseI	CAYNNNNRTG	1 cut(s)	134
SalI	GTCGAC	1 cut(s)	998
SapI	GCTCTTC	1 cut(s)	1096
SaqAI	TTAA	4 cut(s)	201, 246, 378, 971
SatI	GCNGC	6 cut(s)	888, 891, 1440, 1443, 1446, 1449
Sau3AI	GATC	4 cut(s)	43, 163, 523, 1261
Sau96I	GGNCC	1 cut(s)	1118
SchI	GAGTC	1 cut(s)	725
ScrFI	CCNGG	2 cut(s)	837, 981
SduI	GDGCHC	1 cut(s)	117
SfaNI	GCATC	4 cut(s)	556, 692, 1088, 1350
SfcI	CTRYAG	2 cut(s)	885, 1446
SmiMI	CAYNNNNRTG	1 cut(s)	134
SseBI	AGGCCT	1 cut(s)	695
SspMI	CTAG	2 cut(s)	845, 1424
StuI	AGGCCT	1 cut(s)	695
StyD4I	CCNGG	2 cut(s)	835, 979
StyI	CCWWGG	1 cut(s)	1323
TaaI	ACNGT	5 cut(s)	470, 1065, 1133, 1372, 1478
TaqI	TCGA	1 cut(s)	999
TatI	WGTACW	2 cut(s)	764, 1060
TfiI	GAWTC	4 cut(s)	554, 611, 670, 773
Tru1I	TTAA	4 cut(s)	201, 246, 378, 971
Tru9I	TTAA	4 cut(s)	201, 246, 378, 971
TscAI	CASTG	8 cut(s)	141, 291, 322, 409, 693, 858, 1009, 1070
TseFI	GTSAC	3 cut(s)	946, 1303, 1493
TseI	GCWGC	6 cut(s)	887, 890, 1439, 1442, 1445, 1448
Tsp45I	GTSAC	3 cut(s)	946, 1303, 1493
TspRI	CASTG	8 cut(s)	141, 291, 322, 409, 693, 858, 1009, 1070
VspI	ATTAAT	1 cut(s)	246
XagI	CCTNNNNNAGG	1 cut(s)	294
XapI	RAATTY	2 cut(s)	273, 1211
XcmI	CCANNNNNNNNNTGG	1 cut(s)	497
XmiI	GTMKAC	1 cut(s)	999
XmnI	GAANNNNTTC	2 cut(s)	721, 933
XspI	CTAG	2 cut(s)	845, 1424

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.