Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0000599

Physical Location & Seq

Genomic Coordinates Reverse (-)

83131796 .. 83134052

Gene Structure 2257 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG603500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGCTACCTGCAGCAGCTCAGCGTCATGTATTTGAAAAAGTCAAGGAGGGGGAACGACTTGTTGTTGTGGCGACTAATGTGGCTGAAACCTCTTTAACTATACCTGGGATAAAGTATGTAGTCGACACTGGAAAAGTGAGAGTGAAGGACTACAATTTCTCAAATGGCATGGAAACATATAAAGTACAGTGGATTAGTAAGGCATCAGCTATTCAACGCAAAGGAAGAGCTGGAAGAAAAGGGCCTGGCCACTGTTTCCGCTTGTATTCTTCTGCAGTATATGACAATGAGTTTCTTGACTGTTCCGAAGCTGAAATATCCAAAATTCCTGTTGATGGTGTTCTCCTTCTTATGAAGGCTATGAAAATACCGGTATCCGAATTTCAGTTTCCTACTCCTCCAAATGGTGATACTATTGATGAAGCAGAGGATCGTTTGAAGCTCCTCAAAGCACTTGATAGCAATGGAGAGGTGACACCTTTAGGGAAGGCCATGGCTTATTACCCCATAAGTCCTCGCCAATCTAAGATGCTCCTTACGGTCATTGAAATCCTGAATATGAAGCAAAGTTATTCCCGAGCTAATTTAGTGCTAGCATATGCAGTTGCAGCAGCTGCAGCTTTGAGTGTGTCTAATCCTTTTGACAGTCAATTTGAAGATAGTCACATAAAAAACTCTGACTCAAGTCAGAATGGAAGTTATAGTGCTCCAGTTAACAGTGAGTATATGGATCAGCAAGAGATACTGATTAGCAGGAAGAAACTGAAAGTGTCTTCTGAAAATTTTCATAGTAGCAGCAGTGATGCTCTGTCAAGAGCTTATGCTTTGCGAGGCTATGAACTTTCTAAGAGCCAAATGGGTTTCTGCAAGGAAAATGCTCTACACCCGGAAACCATGGAGGAAATATCCAAGCTGAGAAAGCAGCTCCTCAAACTTGTCTTTAATCCAAATGGTGTTTCTGGAGGTGTGAAGGAATTTTCGTGGATCTATGGTAGTCAGAAAGATGTTGAAACTGTTTGGAGGGATGATGAGAAGCTTCTCTCAGTCAATGAGGAAGAGCTCTTATGCCAAGCTATCTGTGCTGGTTGGATAGATAGGGTTGCCAAACGCATTGAAGGAAGTGCATGTCAGGCCTGCATGGTCAAAGAGACTGTGTTCCTCCACTGGCAGTCACCTGTTTCTAAAATTGCTCCTGAGTTTTTGGTGTACAGTGAGTTGATCCAGACAAAGAAACCTTGCATGTACGGCATTACTTGTGTCAGTCCAGATTGGCTCGTCAAGTATGGTCTACTTGCTATGTATGATCAGCGCTTGTGCACTTTTTCAAAAGAAACTCCGCCTTACTATGACCGTCAAACTGACAAACTATTATACAGTGTCACTCCAACCTTTGGTCGTGTTCAACGGTGGGAGCTTCCACAACATTCTTTGCCAATTAGTAATTTTGATCATACAGGCGCAGTTCAAGCCTTTTCTTTTGCTTTGCTCGATGGCAAGGTTTTGCATTGCCTAAGACCTCTGCGTGAGTCCATGGCAGAACGTCCTCACACTGTTTTAAGGCCAGAGGCAGCAGGTCGAGAACGGGTTCATAATCTCTTGGCGAAGCTGGGGAAGAAAAAGATAGTCAGCCGTGCTATGTTGATAGAGGTGTGGAAGGAAAATCCCACTGAATTGTATCCGGAAATCCGGAGCTGGTTTAAGGAGAGTTCCCTCCAGAAGTTTAGGGAAATTTGGGTCAAGATGCTTTATGAAGCCCTTTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010467 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD HA2 Helicase_C OB_NTP_bind

Protein Analysis

587

Amino Acids

66.41

Weight (kDa)

8.62

Isoelectric Point (pI)

43.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Helicase_C	PF00271	3 - 81	4.2e-09	Helicase conserved C-terminal domain
WHD_HA2	PF04408	142 - 170	1.6e-07	Helicase associated domain (HA2), winged-helix
OB_NTP_bind	PF07717	355 - 428	1.4e-15	Oligonucleotide/oligosaccharide-binding (OB)-fold
DHX37_C	PF23362	504 - 581	3.3e-15	DEAH helicase DHX37 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000599)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33390 AT1G33390
fragaria_vesca	FvH4_3g40090 FvH4_3g40090 FvH4_3g40090 FvH4_6g48600
malus_domestica	MD04G1241500.v1.1 MD05G1017800.v1.1
prunus_persica	Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1
pyrus_communis	pycom04g21310 pycom05g01000 pycom05g01050 pycom11g20470
rosa_chinensis	RchiOBHm_Chr2g0168421 RchiOBHm_Chr2g0168431 RchiOBHm_Chr2g0168441 RchiOBHm_Chr2g0168451 RchiOBHm_Chr2g0168461 RchiOBHm_Chr4g0407811 RchiOBHm_Chr7g0220161 RchiOBHm_Chr7g0220171 RchiOBHm_Chr7g0220481
rosa_laevigata	RLG00000002253 RLG00000008696 RLG00000021781
rosa_multiflora	Rmu_co8232135.1_g000001 Rmu_sc0000966.1_g000007 Rmu_sc0003573.1_g000032 Rmu_sc0006361.1_g000012 Rmu_sc0006361.1_g000013 Rmu_sc0012607.1_g000001 Rmu_sc0016657.1_g000009
rosa_roxburghii	Rroxscaffold_2G00083000 Rroxscaffold_2G00083010 Rroxscaffold_3G00239750 Rroxscaffold_5G00352370
rosa_rugosa	Rorug02G0533800 Rorug02G0533800 Rorug04G0081400 Rorug07G0189900 Rorug07G0190000
rosa_samantha	Rh2AG603500 Rh2AG603700 Rh2BG616600 Rh2BG616700 Rh2BG616800 Rh2CG584500 Rh2CG584600 Rh2CG584700 Rh2DG627100 Rh2DG627200 Rh4AG146500 Rh4BG144000 Rh4CG153000 Rh4DG140500 Rh7AG332900 Rh7BG324300 Rh7BG324400 Rh7BG324500 Rh7CG350400 Rh7DG329000
rosa_wichuraiana	Rw0G022710 Rw2G050050 Rw4G011990 Rw7G028060 Rw7G028070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	16, 1562
AccB7I	CCANNNNNTGG	1 cut(s)	1391
AccI	GTMKAC	2 cut(s)	123, 1288
AccIII	TCCGGA	2 cut(s)	1678, 1686
AciI	CCGC	2 cut(s)	259, 1337
AclWI	GGATC	4 cut(s)	438, 738, 992, 1213
AcoI	YGGCCR	1 cut(s)	247
AcsI	RAATTY	5 cut(s)	324, 380, 781, 974, 1728
AfaI	GTAC	3 cut(s)	186, 1208, 1244
AfeI	AGCGCT	1 cut(s)	1310
AfiI	CCNNNNNNNGG	3 cut(s)	335, 404, 1391
AgeI	ACCGGT	1 cut(s)	370
AjnI	CCWGG	2 cut(s)	103, 244
AjuI	GAANNNNNNNTTGG	2 cut(s)	940, 972
Alw21I	GWGCWC	3 cut(s)	709, 1062, 1319
Alw26I	GTCTC	1 cut(s)	1142
Alw44I	GTGCAC	1 cut(s)	1315
AlwI	GGATC	4 cut(s)	438, 738, 992, 1213
AlwNI	CAGNNNCTG	1 cut(s)	614
Ama87I	CYCGRG	1 cut(s)	576
Aor13HI	TCCGGA	2 cut(s)	1678, 1686
Aor51HI	AGCGCT	1 cut(s)	1310
AoxI	GGCC	5 cut(s)	242, 247, 489, 1131, 1559
ApaLI	GTGCAC	1 cut(s)	1315
ApeKI	GCWGC	9 cut(s)	11, 14, 608, 611, 614, 617, 795, 922, 1568
ApoI	RAATTY	5 cut(s)	324, 380, 781, 974, 1728
ArsI	GACNNNNNNTTYG	2 cut(s)	635, 667
AsiGI	ACCGGT	1 cut(s)	370
Asp700I	GAANNNNTTC	2 cut(s)	783, 1584
AspLEI	GCGC	2 cut(s)	1311, 1460
AspS9I	GGNCC	1 cut(s)	242
AsuC2I	CCSGG	1 cut(s)	887
AsuHPI	GGTGA	3 cut(s)	419, 484, 1164
AsuNHI	GCTAGC	1 cut(s)	592
AvaI	CYCGRG	1 cut(s)	576
BaeGI	GKGCMC	1 cut(s)	1319
BalI	TGGCCA	1 cut(s)	249
BanII	GRGCYC	1 cut(s)	1062
BbsI	GAAGAC	1 cut(s)	765
Bbv12I	GWGCWC	3 cut(s)	709, 1062, 1319
BbvI	GCAGC	9 cut(s)	23, 26, 601, 620, 623, 629, 807, 934, 1580
BccI	CCATC	2 cut(s)	329, 1484
BceAI	ACGGC	2 cut(s)	1261, 1614
BciT130I	CCWGG	2 cut(s)	105, 246
BciVI	GTATCC	2 cut(s)	385, 1686
BclI	TGATCA	2 cut(s)	1303, 1447
BcnI	CCSGG	1 cut(s)	887
BcoDI	GTCTC	1 cut(s)	1142
BfaI	CTAG	1 cut(s)	593
BfmI	CTRYAG	3 cut(s)	9, 273, 615
BfoI	RGCGCY	1 cut(s)	1312
BfuAI	ACCTGC	2 cut(s)	16, 1562
BfuI	GTATCC	2 cut(s)	385, 1686
BisI	GCNGC	9 cut(s)	12, 15, 609, 612, 615, 618, 796, 923, 1569
BlpI	GCTNAGC	1 cut(s)	18
BlsI	GCNGC	9 cut(s)	13, 16, 610, 613, 616, 619, 797, 924, 1570
Bme1390I	CCNGG	3 cut(s)	105, 246, 887
BmeT110I	CYCGRG	1 cut(s)	576
BmgT120I	GGNCC	1 cut(s)	242
BmrFI	CCNGG	3 cut(s)	105, 246, 887
BmsI	GCATC	4 cut(s)	212, 519, 793, 1731
BmtI	GCTAGC	1 cut(s)	596
BoxI	GACNNNNGTC	1 cut(s)	684
BpiI	GAAGAC	1 cut(s)	765
BpmI	CTGGAG	3 cut(s)	693, 981, 1697
Bpu1102I	GCTNAGC	1 cut(s)	18
BpuEI	CTTGAG	1 cut(s)	667
BpuMI	CCSGG	1 cut(s)	887
BsaJI	CCNNGG	4 cut(s)	104, 492, 894, 1530
BsaWI	WCCGGW	3 cut(s)	370, 1678, 1686
Bsc4I	CCNNNNNNNGG	3 cut(s)	335, 404, 1391
Bse118I	RCCGGY	1 cut(s)	370
Bse1I	ACTGG	3 cut(s)	133, 710, 1169
Bse3DI	GCAATG	2 cut(s)	469, 1504
BseAI	TCCGGA	2 cut(s)	1678, 1686
BseBI	CCWGG	2 cut(s)	105, 246
BseDI	CCNNGG	4 cut(s)	104, 492, 894, 1530
BseGI	GGATG	1 cut(s)	1030
BseLI	CCNNNNNNNGG	3 cut(s)	335, 404, 1391
BseMI	GCAATG	2 cut(s)	469, 1504
BseMII	CTCAG	4 cut(s)	32, 905, 1056, 1185
BseNI	ACTGG	3 cut(s)	133, 710, 1169
BseRI	GAGGAG	3 cut(s)	387, 434, 917
BseSI	GKGCMC	1 cut(s)	1319
BseXI	GCAGC	9 cut(s)	23, 26, 601, 620, 623, 629, 807, 934, 1580
BseYI	CCCAGC	1 cut(s)	1606
BshFI	GGCC	5 cut(s)	244, 249, 491, 1133, 1561
BshTI	ACCGGT	1 cut(s)	370
BsiHKAI	GWGCWC	3 cut(s)	709, 1062, 1319
BsiHKCI	CYCGRG	1 cut(s)	576
BsiSI	CCGG	4 cut(s)	371, 887, 1679, 1687
BslI	CCNNNNNNNGG	3 cut(s)	335, 404, 1391
BsmAI	GTCTC	1 cut(s)	1142
BsnI	GGCC	5 cut(s)	244, 249, 491, 1133, 1561
BsoBI	CYCGRG	1 cut(s)	576
Bsp1286I	GDGCHC	3 cut(s)	709, 1062, 1319
Bsp13I	TCCGGA	2 cut(s)	1678, 1686
Bsp1407I	TGTACA	1 cut(s)	1206
Bsp143I	GATC	6 cut(s)	430, 730, 984, 1218, 1303, 1447
Bsp1720I	GCTNAGC	1 cut(s)	18
Bsp19I	CCATGG	3 cut(s)	492, 894, 1530
BspACI	CCGC	2 cut(s)	259, 1337
BspANI	GGCC	5 cut(s)	244, 249, 491, 1133, 1561
BspCNI	CTCAG	4 cut(s)	31, 906, 1055, 1186
BspEI	TCCGGA	2 cut(s)	1678, 1686
BspMAI	CTGCAG	3 cut(s)	13, 277, 619
BspMI	ACCTGC	2 cut(s)	16, 1562
BspOI	GCTAGC	1 cut(s)	596
BspPI	GGATC	4 cut(s)	438, 738, 992, 1213
BspQI	GCTCTTC	2 cut(s)	220, 1050
BsrDI	GCAATG	2 cut(s)	469, 1504
BsrFI	RCCGGY	1 cut(s)	370
BsrGI	TGTACA	1 cut(s)	1206
BsrI	ACTGG	3 cut(s)	133, 710, 1169
BssAI	RCCGGY	1 cut(s)	370
BssECI	CCNNGG	4 cut(s)	104, 492, 894, 1530
BssMI	GATC	6 cut(s)	430, 730, 984, 1218, 1303, 1447
BssT1I	CCWWGG	3 cut(s)	492, 894, 1530
Bst2UI	CCWGG	2 cut(s)	105, 246
Bst6I	CTCTTC	2 cut(s)	220, 1050
BstAPI	GCANNNNNTGC	1 cut(s)	614
BstAUI	TGTACA	1 cut(s)	1206
BstC8I	GCNNGC	2 cut(s)	594, 1135
BstDEI	CTNAG	7 cut(s)	18, 525, 846, 914, 1042, 1194, 1511
BstDSI	CCRYGG	3 cut(s)	492, 894, 1530
BstF5I	GGATG	1 cut(s)	1030
BstH2I	RGCGCY	1 cut(s)	1312
BstHHI	GCGC	2 cut(s)	1311, 1460
BstKTI	GATC	6 cut(s)	433, 733, 987, 1221, 1306, 1450
BstMAI	GTCTC	1 cut(s)	1142
BstMBI	GATC	6 cut(s)	430, 730, 984, 1218, 1303, 1447
BstMWI	GCNNNNNNNGC	8 cut(s)	608, 614, 617, 919, 1079, 1130, 1245, 1466
BstNI	CCWGG	2 cut(s)	105, 246
BstNSI	RCATGY	2 cut(s)	1128, 1243
BstPAI	GACNNNNGTC	1 cut(s)	684
BstSCI	CCNGG	3 cut(s)	103, 244, 885
BstSFI	CTRYAG	3 cut(s)	9, 273, 615
BstSLI	GKGCMC	1 cut(s)	1319
BstV1I	GCAGC	9 cut(s)	23, 26, 601, 620, 623, 629, 807, 934, 1580
BstV2I	GAAGAC	1 cut(s)	765
BstX2I	RGATCY	1 cut(s)	984
BstYI	RGATCY	1 cut(s)	984
BsuI	GTATCC	2 cut(s)	385, 1686
BsuRI	GGCC	5 cut(s)	244, 249, 491, 1133, 1561
BtgI	CCRYGG	3 cut(s)	492, 894, 1530
BtsCI	GGATG	1 cut(s)	1030
BtsI	GCAGTG	1 cut(s)	805
BveI	ACCTGC	2 cut(s)	16, 1562
Cac8I	GCNNGC	2 cut(s)	594, 1135
CaiI	CAGNNNCTG	1 cut(s)	614
CfoI	GCGC	2 cut(s)	1311, 1460
Cfr10I	RCCGGY	1 cut(s)	370
Cfr13I	GGNCC	1 cut(s)	242
CseI	GACGC	1 cut(s)	11
Csp6I	GTAC	3 cut(s)	185, 1207, 1243
CspAI	ACCGGT	1 cut(s)	370
CviAII	CATG	8 cut(s)	26, 169, 493, 895, 1125, 1138, 1240, 1531
CviQI	GTAC	3 cut(s)	185, 1207, 1243
DdeI	CTNAG	7 cut(s)	18, 525, 846, 914, 1042, 1194, 1511
DpnI	GATC	6 cut(s)	432, 732, 986, 1220, 1305, 1449
DpnII	GATC	6 cut(s)	430, 730, 984, 1218, 1303, 1447
EaeI	YGGCCR	1 cut(s)	247
Eam1104I	CTCTTC	2 cut(s)	220, 1050
EarI	CTCTTC	2 cut(s)	220, 1050
EciI	GGCGGA	1 cut(s)	1326
Ecl136II	GAGCTC	1 cut(s)	1060
Eco130I	CCWWGG	3 cut(s)	492, 894, 1530
Eco147I	AGGCCT	1 cut(s)	1133
Eco24I	GRGCYC	1 cut(s)	1062
Eco47III	AGCGCT	1 cut(s)	1310
Eco53kI	GAGCTC	1 cut(s)	1060
Eco88I	CYCGRG	1 cut(s)	576
EcoICRI	GAGCTC	1 cut(s)	1060
EcoO109I	RGGNCCY	1 cut(s)	242
EcoRII	CCWGG	2 cut(s)	103, 244
EcoT14I	CCWWGG	3 cut(s)	492, 894, 1530
EcoT38I	GRGCYC	1 cut(s)	1062
ErhI	CCWWGG	3 cut(s)	492, 894, 1530
FaeI	CATG	8 cut(s)	29, 172, 496, 898, 1128, 1141, 1243, 1534
FatI	CATG	8 cut(s)	25, 168, 492, 894, 1124, 1137, 1239, 1530
FauNDI	CATATG	1 cut(s)	598
FbaI	TGATCA	2 cut(s)	1303, 1447
FblI	GTMKAC	2 cut(s)	123, 1288
Fnu4HI	GCNGC	9 cut(s)	12, 15, 609, 612, 615, 618, 796, 923, 1569
FokI	GGATG	1 cut(s)	1037
FriOI	GRGCYC	1 cut(s)	1062
Fsp4HI	GCNGC	9 cut(s)	12, 15, 609, 612, 615, 618, 796, 923, 1569
FspBI	CTAG	1 cut(s)	593
GlaI	GCGC	2 cut(s)	1310, 1459
GluI	GCNGC	9 cut(s)	12, 15, 609, 612, 615, 618, 796, 923, 1569
GsaI	CCCAGC	1 cut(s)	1610
GsuI	CTGGAG	3 cut(s)	693, 981, 1697
HaeII	RGCGCY	1 cut(s)	1312
HaeIII	GGCC	5 cut(s)	244, 249, 491, 1133, 1561
HapII	CCGG	4 cut(s)	371, 887, 1679, 1687
HgaI	GACGC	1 cut(s)	11
HhaI	GCGC	2 cut(s)	1311, 1460
Hin1II	CATG	8 cut(s)	29, 172, 496, 898, 1128, 1141, 1243, 1534
Hin6I	GCGC	2 cut(s)	1309, 1458
HinP1I	GCGC	2 cut(s)	1309, 1458
HincII	GTYRAC	2 cut(s)	124, 715
HindII	GTYRAC	2 cut(s)	124, 715
HindIII	AAGCTT	1 cut(s)	1034
HinfI	GANTC	2 cut(s)	680, 1526
HpaI	GTTAAC	1 cut(s)	715
HpaII	CCGG	4 cut(s)	371, 887, 1679, 1687
HphI	GGTGA	3 cut(s)	419, 484, 1164
Hpy166II	GTNNAC	5 cut(s)	124, 715, 1207, 1289, 1317
Hpy188I	TCNGA	6 cut(s)	307, 379, 679, 690, 778, 999
Hpy8I	GTNNAC	5 cut(s)	124, 715, 1207, 1289, 1317
HpyAV	CCTTC	7 cut(s)	139, 349, 356, 481, 964, 1109, 1648
HpyCH4IV	ACGT	1 cut(s)	1540
HpyF10VI	GCNNNNNNNGC	8 cut(s)	608, 614, 617, 919, 1079, 1130, 1245, 1466
HpyF3I	CTNAG	7 cut(s)	18, 525, 846, 914, 1042, 1194, 1511
HpySE526I	ACGT	1 cut(s)	1540
Hsp92II	CATG	8 cut(s)	29, 172, 496, 898, 1128, 1141, 1243, 1534
HspAI	GCGC	2 cut(s)	1309, 1458
Kpn2I	TCCGGA	2 cut(s)	1678, 1686
Ksp22I	TGATCA	2 cut(s)	1303, 1447
KspAI	GTTAAC	1 cut(s)	715
Kzo9I	GATC	6 cut(s)	430, 730, 984, 1218, 1303, 1447
LguI	GCTCTTC	2 cut(s)	220, 1050
LmnI	GCTCC	7 cut(s)	447, 537, 712, 930, 1195, 1411, 1689
Lsp1109I	GCAGC	9 cut(s)	23, 26, 601, 620, 623, 629, 807, 934, 1580
LweI	GCATC	4 cut(s)	212, 519, 793, 1731
MaeI	CTAG	1 cut(s)	593
MaeII	ACGT	1 cut(s)	1540
MaeIII	GTNAC	4 cut(s)	472, 662, 1170, 1378
MalI	GATC	6 cut(s)	432, 732, 986, 1220, 1305, 1449
MboI	GATC	6 cut(s)	430, 730, 984, 1218, 1303, 1447
MboII	GAAGA	8 cut(s)	237, 246, 261, 668, 765, 769, 1067, 1624
MflI	RGATCY	1 cut(s)	984
MhlI	GDGCHC	3 cut(s)	709, 1062, 1319
MlsI	TGGCCA	1 cut(s)	249
MluNI	TGGCCA	1 cut(s)	249
MlyI	GAGTC	2 cut(s)	674, 1535
MmeI	TCCRAC	2 cut(s)	1067, 1409
Mox20I	TGGCCA	1 cut(s)	249
MroI	TCCGGA	2 cut(s)	1678, 1686
MroXI	GAANNNNTTC	2 cut(s)	783, 1584
MscI	TGGCCA	1 cut(s)	249
MseI	TTAA	5 cut(s)	95, 714, 942, 1556, 1698
Msp20I	TGGCCA	1 cut(s)	249
MspA1I	CMGCKG	1 cut(s)	614
MspI	CCGG	4 cut(s)	371, 887, 1679, 1687
MspR9I	CCNGG	3 cut(s)	105, 246, 887
MvaI	CCWGG	2 cut(s)	105, 246
MwoI	GCNNNNNNNGC	8 cut(s)	608, 614, 617, 919, 1079, 1130, 1245, 1466
NciI	CCSGG	1 cut(s)	887
NcoI	CCATGG	3 cut(s)	492, 894, 1530
NdeI	CATATG	1 cut(s)	598
NdeII	GATC	6 cut(s)	430, 730, 984, 1218, 1303, 1447
NheI	GCTAGC	1 cut(s)	592
NlaIII	CATG	8 cut(s)	29, 172, 496, 898, 1128, 1141, 1243, 1534
NmuCI	GTSAC	4 cut(s)	472, 662, 1170, 1378
NspI	RCATGY	2 cut(s)	1128, 1243
PceI	AGGCCT	1 cut(s)	1133
PciSI	GCTCTTC	2 cut(s)	220, 1050
PdmI	GAANNNNTTC	2 cut(s)	783, 1584
PflMI	CCANNNNNTGG	1 cut(s)	1391
PinAI	ACCGGT	1 cut(s)	370
PkrI	GCNGC	9 cut(s)	13, 16, 610, 613, 616, 619, 797, 924, 1570
PleI	GAGTC	2 cut(s)	674, 1534
PpsI	GAGTC	2 cut(s)	674, 1534
PshAI	GACNNNNGTC	1 cut(s)	684
Psp124BI	GAGCTC	1 cut(s)	1062
Psp6I	CCWGG	2 cut(s)	103, 244
PspFI	CCCAGC	1 cut(s)	1606
PspGI	CCWGG	2 cut(s)	103, 244
PspPI	GGNCC	1 cut(s)	242
PstI	CTGCAG	3 cut(s)	13, 277, 619
PstNI	CAGNNNCTG	1 cut(s)	614
PsuI	RGATCY	1 cut(s)	984
PvuII	CAGCTG	1 cut(s)	614
RsaI	GTAC	3 cut(s)	186, 1208, 1244
RsaNI	GTAC	3 cut(s)	185, 1207, 1243
SacI	GAGCTC	1 cut(s)	1062
SalI	GTCGAC	1 cut(s)	122
SapI	GCTCTTC	2 cut(s)	220, 1050
SaqAI	TTAA	5 cut(s)	95, 714, 942, 1556, 1698
SatI	GCNGC	9 cut(s)	12, 15, 609, 612, 615, 618, 796, 923, 1569
Sau3AI	GATC	6 cut(s)	430, 730, 984, 1218, 1303, 1447
Sau96I	GGNCC	1 cut(s)	242
SchI	GAGTC	2 cut(s)	674, 1535
ScrFI	CCNGG	3 cut(s)	105, 246, 887
SduI	GDGCHC	3 cut(s)	709, 1062, 1319
SfaNI	GCATC	4 cut(s)	212, 519, 793, 1731
SfcI	CTRYAG	3 cut(s)	9, 273, 615
SmlI	CTYRAG	1 cut(s)	682
SmoI	CTYRAG	1 cut(s)	682
SseBI	AGGCCT	1 cut(s)	1133
SsiI	CCGC	2 cut(s)	259, 1337
SspMI	CTAG	1 cut(s)	593
SstI	GAGCTC	1 cut(s)	1062
StuI	AGGCCT	1 cut(s)	1133
StyD4I	CCNGG	3 cut(s)	103, 244, 885
StyI	CCWWGG	3 cut(s)	492, 894, 1530
TaiI	ACGT	1 cut(s)	1543
TaqI	TCGA	3 cut(s)	123, 1488, 1576
TatI	WGTACW	2 cut(s)	184, 1206
Tru1I	TTAA	5 cut(s)	95, 714, 942, 1556, 1698
Tru9I	TTAA	5 cut(s)	95, 714, 942, 1556, 1698
TseFI	GTSAC	4 cut(s)	472, 662, 1170, 1378
TseI	GCWGC	9 cut(s)	11, 14, 608, 611, 614, 617, 795, 922, 1568
Tsp45I	GTSAC	4 cut(s)	472, 662, 1170, 1378
TspDTI	ATGAA	8 cut(s)	368, 377, 435, 575, 776, 852, 1577, 1764
Van91I	CCANNNNNTGG	1 cut(s)	1391
VneI	GTGCAC	1 cut(s)	1315
XapI	RAATTY	5 cut(s)	324, 380, 781, 974, 1728
XceI	RCATGY	2 cut(s)	1128, 1243
XmiI	GTMKAC	2 cut(s)	123, 1288
XmnI	GAANNNNTTC	2 cut(s)	783, 1584
XspI	CTAG	1 cut(s)	593

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.