Rmu_sc0006361.1_g000012

ATP-dependent RNA helicase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006361.1
Physical Location & Seq
Reverse (-)
62812 .. 65695
2884 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006361.1_g000012.1.cds

Sequence Viewer

Length: 2601 bp
atgtcatggcagaaagagtatgaacgtcagcaggagtttttgcagcagtactcacatttaggaatatctatagatcgggagaaacttgtttttccactgaagcttgtgcttatgagtgctaccatgccagtggaagacttcatttcttataggaagctgtttcctgaccccccacaagagataaatgttttgtctagacaatttaaagtagacattcagttctcaacgacaactaaagctgattatactaaggaagcatgtaaaaaggtcttggaaattcacaagaatatgccacaaggaggcatacttgtgtttgtcactgggtactgggaagtggaggtattgtgtaaacagctacgtagagcttcaagggaactgactatgaaaataaaaaaagggtgttgtgtgatggaaggttctgtaataaactctgttggagagataaatatgaaggagaacagcgaagcatttcattcagccaaccatcagaatgatgtatttagttacactgatgaagatcagtgcgaggtagatgacaagtttggttcttcatatgatacagaaacagagggtgagctggaaattattggtgacgatggggattcattgtgtcaagataccccagaagtctatggtgaggttgcacagattttaggagagaacgtgagcattgcatcactgaaagcctcttttgaatcattggctggaaaatcttcttcagattctacttgcaaagaacctttttcacgaactctagactctagctctagccaatccaatcatagtcgcagcttggggaaaaaagatgccgttgtagatgatagttttccaggctctctgcgtgttcttcctctttattctatgctgcctgcagcagctcagcatcgtgtatttgatgaagtaaaggaaggagaacggcttgttgttgtggccaccaatgttgctgaaacctctgtcactatacctgggataaagtatgttgtcgatactggaaaagtgaaatcaaaggaatacaactttaaaaatggaagtgaaatatataaggtacagtggattagtaaggcatcggctgttcaacgtgcaggaagagctggaagaacagggcctggtcactgtttccgcctttattcttcggcagcatttaataatatcttcgatgacagttccccatctgaaatatccaaagtccctcttgaaggtcacatccttcttttgaagtccatggacattgagttgtctgcttttccttttcttactcgtccaaatgatgatgctcttaatggaggacagcgttgcttggagatccttgaagcgcttactgaggatggagaagtgacacctctagggaaggccatggcttattatcccataagtcctcgccactctaagatgctcctaacagtcatcaaaatgttgaataaggagaaaagttataaacgacctaatttagtactagcatatgcagttgcttcagctgcagctttgagtttgtcaaatatttttgttagtcagtttgaagacagttgcacagaaaaccatgacttaattgatggaaattctagtgctccagttcacggtgaagttatagacaagcaagagagagtaatcaaagagaagaaagtgagagcgtcttgtgaaaattttagtagtcatagcagtgatgccctttccagagcttatgttttgcggctctatgaactttccaagagccgattgcatttctgcaaggacaatgctctacacccagaaaccatgcatgaaatatccgagctgagagagcagctactcaaacttgtcttttatcatagtggtgtgtctggcggtgaattttcatggatccatggtagtcaggaagatgttgagcatgattggagggctgatgttatccctctttctttggatgaggaaggcctcttgtgccgggccatctgtgctggttgggcagatagagttgccaagcgcattaaaggaagtaaaaatcaatatcaaacctgcttgagtaatgagaatgtcttcctcgaccgccagtcatctgtttctaaaattgctcctgaatatttggtgtacagtgagttgatacagaaaaagaaaccatacatgcacggtgttacttgtatcgaaccagaatggcttgttgactgtggtcgggtcttatgcaagcttccaaagggcagtgcaccttactatgactgtgtaagtgacaaggtactatacaatgtcactccaacctttggtcctcatttgtggaagcttccggaacattgtttgcctattaataagactgagtttaaaggtgcagtgcaagcttttgcttttgctttgttggacggcaaggttctgcgttgcctgagacctgtgcgtgcattcatggcagaacatcctcgtactgttttaaagccggtggcagcaaatcgagaacgggttcagaatctcttgttgaagttgggggagaagaagatacacagccgtgctatgttgagagaagtgtggagtaaaaatcccaacgaattgtatctggaaatccggaactggtttagaaagaatttccactataagtttaaggatatttgggtcgaaatgcttcgtgaagccgtttactaa

Protein Analysis

866

Amino Acids

97.83

Weight (kDa)

6.42

Isoelectric Point (pI)

40.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000599)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33390 AT1G33390
fragaria_vesca FvH4_3g40090 FvH4_3g40090 FvH4_3g40090 FvH4_6g48600
malus_domestica MD04G1241500.v1.1 MD05G1017800.v1.1
prunus_persica Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1
pyrus_communis pycom04g21310 pycom05g01000 pycom05g01050 pycom11g20470
rosa_chinensis RchiOBHm_Chr2g0168421 RchiOBHm_Chr2g0168431 RchiOBHm_Chr2g0168441 RchiOBHm_Chr2g0168451 RchiOBHm_Chr2g0168461 RchiOBHm_Chr4g0407811 RchiOBHm_Chr7g0220161 RchiOBHm_Chr7g0220171 RchiOBHm_Chr7g0220481
rosa_laevigata RLG00000002253 RLG00000008696 RLG00000021781
rosa_multiflora Rmu_co8232135.1_g000001 Rmu_sc0000966.1_g000007 Rmu_sc0003573.1_g000032 Rmu_sc0006361.1_g000012 Rmu_sc0006361.1_g000013 Rmu_sc0012607.1_g000001 Rmu_sc0016657.1_g000009
rosa_roxburghii Rroxscaffold_2G00083000 Rroxscaffold_2G00083010 Rroxscaffold_3G00239750 Rroxscaffold_5G00352370
rosa_rugosa Rorug02G0533800 Rorug02G0533800 Rorug04G0081400 Rorug07G0189900 Rorug07G0190000
rosa_samantha Rh2AG603500 Rh2AG603700 Rh2BG616600 Rh2BG616700 Rh2BG616800 Rh2CG584500 Rh2CG584600 Rh2CG584700 Rh2DG627100 Rh2DG627200 Rh4AG146500 Rh4BG144000 Rh4CG153000 Rh4DG140500 Rh7AG332900 Rh7BG324300 Rh7BG324400 Rh7BG324500 Rh7CG350400 Rh7DG329000
rosa_wichuraiana Rw0G022710 Rw2G050050 Rw4G011990 Rw7G028060 Rw7G028070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1434
Acc36I ACCTGC 1 cut(s) 2000
AccB7I CCANNNNNTGG 1 cut(s) 2231
AccI GTMKAC 1 cut(s) 210
AccIII TCCGGA 2 cut(s) 2254, 2523
AciI CCGC 4 cut(s) 1120, 1687, 1821, 2023
AclWI GGATC 3 cut(s) 1297, 1831, 1844
AcoI YGGCCR 1 cut(s) 930
AcsI RAATTY 5 cut(s) 276, 1555, 1639, 1826, 2542
AcuI CTGAAG 3 cut(s) 119, 702, 1455
AfaI GTAC 7 cut(s) 50, 326, 1047, 1452, 2066, 2208, 2386
AfeI AGCGCT 1 cut(s) 1314
AfiI CCNNNNNNNGG 4 cut(s) 299, 1196, 1574, 2231
AgsI TTSAA 9 cut(s) 369, 695, 1076, 1196, 1216, 1310, 1417, 1517, 2440
AhdI GACNNNNNGTC 1 cut(s) 2026
AjnI CCWGG 3 cut(s) 829, 964, 1105
AleI CACNNNNGTG 1 cut(s) 2466
Alw21I GWGCWC 2 cut(s) 1567, 2179
Alw26I GTCTC 1 cut(s) 2344
Alw44I GTGCAC 1 cut(s) 2175
AlwI GGATC 3 cut(s) 1297, 1831, 1844
AlwNI CAGNNNCTG 1 cut(s) 1106
Aor13HI TCCGGA 2 cut(s) 2254, 2523
Aor51HI AGCGCT 1 cut(s) 1314
AoxI GGCC 5 cut(s) 930, 1103, 1350, 1909, 1923
ApaLI GTGCAC 1 cut(s) 2175
ApoI RAATTY 5 cut(s) 276, 1555, 1639, 1826, 2542
AseI ATTAAT 1 cut(s) 2274
Asp700I GAANNNNTTC 5 cut(s) 468, 712, 2012, 2421, 2580
AspLEI GCGC 2 cut(s) 1315, 1962
AspS9I GGNCC 3 cut(s) 1103, 1923, 2234
AsuC2I CCSGG 1 cut(s) 1922
AsuHPI GGTGA 5 cut(s) 584, 602, 647, 1589, 1835
AvaII GGWCC 1 cut(s) 2234
BaeGI GKGCMC 1 cut(s) 2179
BalI TGGCCA 1 cut(s) 932
BamHI GGATCC 1 cut(s) 1836
BbsI GAAGAC 3 cut(s) 141, 1524, 2005
Bbv12I GWGCWC 2 cut(s) 1567, 2179
BccI CCATC 7 cut(s) 403, 492, 590, 1177, 1319, 1544, 1934
BceAI ACGGC 5 cut(s) 794, 932, 2344, 2451, 2576
BciT130I CCWGG 3 cut(s) 831, 966, 1107
BcnI CCSGG 1 cut(s) 1922
BcoDI GTCTC 1 cut(s) 2344
BfaI CTAG 7 cut(s) 195, 755, 762, 768, 1343, 1454, 1560
BfmI CTRYAG 3 cut(s) 69, 870, 1476
BfoI RGCGCY 1 cut(s) 1316
BfuAI ACCTGC 1 cut(s) 2000
BlpI GCTNAGC 1 cut(s) 879
BmcAI AGTACT 2 cut(s) 50, 1452
Bme1390I CCNGG 4 cut(s) 831, 966, 1107, 1922
Bme18I GGWCC 1 cut(s) 2234
BmeRI GACNNNNNGTC 1 cut(s) 2026
BmgT120I GGNCC 3 cut(s) 1103, 1923, 2234
BmiI GGNNCC 1 cut(s) 1838
BmrFI CCNGG 4 cut(s) 831, 966, 1107, 1922
BmrI ACTGGG 2 cut(s) 330, 337
BmsI GCATC 7 cut(s) 683, 796, 892, 1073, 1261, 1380, 1651
BmuI ACTGGG 2 cut(s) 330, 337
BoxI GACNNNNGTC 1 cut(s) 2142
BpiI GAAGAC 3 cut(s) 141, 1524, 2005
BpmI CTGGAG 1 cut(s) 1551
Bpu1102I GCTNAGC 1 cut(s) 879
BpuEI CTTGAG 1 cut(s) 2017
BpuMI CCSGG 1 cut(s) 1922
BsaAI YACGTR 1 cut(s) 359
BsaBI GATNNNNATC 1 cut(s) 516
BsaI GGTCTC 1 cut(s) 2344
BsaJI CCNNGG 4 cut(s) 965, 1221, 1353, 1840
BsaWI WCCGGW 2 cut(s) 2254, 2523
BsaXI ACNNNNNCTCC 4 cut(s) 329, 359, 648, 678
Bsc4I CCNNNNNNNGG 4 cut(s) 299, 1196, 1574, 2231
Bse118I RCCGGY 1 cut(s) 2398
Bse1I ACTGG 7 cut(s) 128, 325, 332, 994, 1568, 2026, 2534
Bse3DI GCAATG 1 cut(s) 669
Bse8I GATNNNNATC 1 cut(s) 516
BseAI TCCGGA 2 cut(s) 2254, 2523
BseBI CCWGG 3 cut(s) 831, 966, 1107
BseDI CCNNGG 4 cut(s) 965, 1221, 1353, 1840
BseGI GGATG 4 cut(s) 1203, 1330, 1906, 2377
BseJI GATNNNNATC 1 cut(s) 516
BseLI CCNNNNNNNGG 4 cut(s) 299, 1196, 1574, 2231
BseMI GCAATG 1 cut(s) 669
BseMII CTCAG 5 cut(s) 893, 1311, 1763, 2274, 2339
BseNI ACTGG 7 cut(s) 128, 325, 332, 994, 1568, 2026, 2534
BseSI GKGCMC 1 cut(s) 2179
BsgI GTGCAG 2 cut(s) 1101, 2316
Bsh1285I CGRYCG 1 cut(s) 2023
BshFI GGCC 5 cut(s) 932, 1105, 1352, 1911, 1925
BsiEI CGRYCG 1 cut(s) 2023
BsiHKAI GWGCWC 2 cut(s) 1567, 2179
BsiSI CCGG 4 cut(s) 1921, 2255, 2399, 2524
BslFI GGGAC 1 cut(s) 1172
BslI CCNNNNNNNGG 4 cut(s) 299, 1196, 1574, 2231
BsmAI GTCTC 1 cut(s) 2344
BsmFI GGGAC 1 cut(s) 1172
BsmI GAATGC 1 cut(s) 2363
BsnI GGCC 5 cut(s) 932, 1105, 1352, 1911, 1925
Bso31I GGTCTC 1 cut(s) 2344
Bsp1286I GDGCHC 2 cut(s) 1567, 2179
Bsp13I TCCGGA 2 cut(s) 2254, 2523
Bsp1407I TGTACA 1 cut(s) 2064
Bsp143I GATC 4 cut(s) 73, 517, 1302, 1836
Bsp1720I GCTNAGC 1 cut(s) 879
Bsp19I CCATGG 3 cut(s) 1221, 1353, 1840
BspACI CCGC 4 cut(s) 1120, 1687, 1821, 2023
BspANI GGCC 5 cut(s) 932, 1105, 1352, 1911, 1925
BspCNI CTCAG 5 cut(s) 892, 1312, 1764, 2275, 2340
BspEI TCCGGA 2 cut(s) 2254, 2523
BspLI GGNNCC 1 cut(s) 1838
BspMAI CTGCAG 2 cut(s) 874, 1480
BspMI ACCTGC 1 cut(s) 2000
BspPI GGATC 3 cut(s) 1297, 1831, 1844
BspQI GCTCTTC 1 cut(s) 1081
BspTNI GGTCTC 1 cut(s) 2344
BsrDI GCAATG 1 cut(s) 669
BsrFI RCCGGY 1 cut(s) 2398
BsrGI TGTACA 1 cut(s) 2064
BsrI ACTGG 7 cut(s) 128, 325, 332, 994, 1568, 2026, 2534
BssAI RCCGGY 1 cut(s) 2398
BssECI CCNNGG 4 cut(s) 965, 1221, 1353, 1840
BssMI GATC 4 cut(s) 73, 517, 1302, 1836
BssT1I CCWWGG 3 cut(s) 1221, 1353, 1840
Bst2UI CCWGG 3 cut(s) 831, 966, 1107
Bst6I CTCTTC 1 cut(s) 1081
BstAUI TGTACA 1 cut(s) 2064
BstBAI YACGTR 1 cut(s) 359
BstC8I GCNNGC 4 cut(s) 870, 2159, 2304, 2361
BstDEI CTNAG 7 cut(s) 249, 879, 1320, 1386, 1772, 2283, 2348
BstDSI CCRYGG 3 cut(s) 1221, 1353, 1840
BstENI CCTNNNNNAGG 1 cut(s) 1194
BstF5I GGATG 4 cut(s) 1203, 1330, 1906, 2377
BstH2I RGCGCY 1 cut(s) 1316
BstHHI GCGC 2 cut(s) 1315, 1962
BstKTI GATC 4 cut(s) 76, 520, 1305, 1839
BstMAI GTCTC 1 cut(s) 2344
BstMBI GATC 4 cut(s) 73, 517, 1302, 1836
BstMCI CGRYCG 1 cut(s) 2023
BstMWI GCNNNNNNNGC 8 cut(s) 1088, 1475, 1777, 1917, 1931, 1940, 2303, 2369
BstNI CCWGG 3 cut(s) 831, 966, 1107
BstNSI RCATGY 2 cut(s) 261, 2101
BstPAI GACNNNNGTC 1 cut(s) 2142
BstSCI CCNGG 4 cut(s) 829, 964, 1105, 1920
BstSFI CTRYAG 3 cut(s) 69, 870, 1476
BstSLI GKGCMC 1 cut(s) 2179
BstSNI TACGTA 1 cut(s) 359
BstV2I GAAGAC 3 cut(s) 141, 1524, 2005
BstX2I RGATCY 2 cut(s) 1302, 1836
BstXI CCANNNNNNTGG 1 cut(s) 130
BstYI RGATCY 2 cut(s) 1302, 1836
BsuRI GGCC 5 cut(s) 932, 1105, 1352, 1911, 1925
BtgI CCRYGG 3 cut(s) 1221, 1353, 1840
BtsCI GGATG 4 cut(s) 1203, 1330, 1906, 2377
BtsI GCAGTG 3 cut(s) 1663, 2179, 2304
BveI ACCTGC 1 cut(s) 2000
Cac8I GCNNGC 4 cut(s) 870, 2159, 2304, 2361
CaiI CAGNNNCTG 1 cut(s) 1106
CfoI GCGC 2 cut(s) 1315, 1962
Cfr10I RCCGGY 1 cut(s) 2398
Cfr13I GGNCC 3 cut(s) 1103, 1923, 2234
CseI GACGC 1 cut(s) 1617
Csp6I GTAC 7 cut(s) 49, 325, 1046, 1451, 2065, 2207, 2385
CspCI CAANNNNNGTGG 2 cut(s) 922, 957
CviQI GTAC 7 cut(s) 49, 325, 1046, 1451, 2065, 2207, 2385
DdeI CTNAG 7 cut(s) 249, 879, 1320, 1386, 1772, 2283, 2348
DpnI GATC 4 cut(s) 75, 519, 1304, 1838
DpnII GATC 4 cut(s) 73, 517, 1302, 1836
DraI TTTAAA 4 cut(s) 205, 1021, 2290, 2394
DriI GACNNNNNGTC 1 cut(s) 2026
EaeI YGGCCR 1 cut(s) 930
Eam1104I CTCTTC 1 cut(s) 1081
Eam1105I GACNNNNNGTC 1 cut(s) 2026
EarI CTCTTC 1 cut(s) 1081
EciI GGCGGA 1 cut(s) 1109
Eco105I TACGTA 1 cut(s) 359
Eco130I CCWWGG 3 cut(s) 1221, 1353, 1840
Eco147I AGGCCT 1 cut(s) 1911
Eco31I GGTCTC 1 cut(s) 2344
Eco47I GGWCC 1 cut(s) 2234
Eco47III AGCGCT 1 cut(s) 1314
Eco57I CTGAAG 3 cut(s) 119, 702, 1455
EcoNI CCTNNNNNAGG 1 cut(s) 1194
EcoO109I RGGNCCY 1 cut(s) 1103
EcoRII CCWGG 3 cut(s) 829, 964, 1105
EcoT14I CCWWGG 3 cut(s) 1221, 1353, 1840
EcoT22I ATGCAT 1 cut(s) 1758
ErhI CCWWGG 3 cut(s) 1221, 1353, 1840
FalI AAGNNNNNCTT 2 cut(s) 1176, 1208
FaqI GGGAC 1 cut(s) 1172
FauNDI CATATG 2 cut(s) 553, 1459
FblI GTMKAC 1 cut(s) 210
FokI GGATG 4 cut(s) 1190, 1337, 1913, 2364
FspBI CTAG 7 cut(s) 195, 755, 762, 768, 1343, 1454, 1560
GlaI GCGC 2 cut(s) 1314, 1961
GsuI CTGGAG 1 cut(s) 1551
HaeII RGCGCY 1 cut(s) 1316
HaeIII GGCC 5 cut(s) 932, 1105, 1352, 1911, 1925
HapII CCGG 4 cut(s) 1921, 2255, 2399, 2524
HgaI GACGC 1 cut(s) 1617
HhaI GCGC 2 cut(s) 1315, 1962
Hin6I GCGC 2 cut(s) 1313, 1960
HinP1I GCGC 2 cut(s) 1313, 1960
HincII GTYRAC 1 cut(s) 2137
HindII GTYRAC 1 cut(s) 2137
HindIII AAGCTT 4 cut(s) 101, 2159, 2249, 2304
HinfI GANTC 5 cut(s) 602, 695, 722, 758, 2428
HpaII CCGG 4 cut(s) 1921, 2255, 2399, 2524
HphI GGTGA 5 cut(s) 584, 602, 647, 1589, 1835
Hpy166II GTNNAC 7 cut(s) 211, 350, 1573, 2065, 2137, 2177, 2596
Hpy188I TCNGA 5 cut(s) 489, 721, 1174, 1768, 2427
Hpy8I GTNNAC 7 cut(s) 211, 350, 1573, 2065, 2137, 2177, 2596
HpyAV CCTTC 7 cut(s) 407, 445, 902, 1190, 1217, 1342, 1901
HpyCH4IV ACGT 4 cut(s) 25, 358, 663, 1078
HpyF10VI GCNNNNNNNGC 8 cut(s) 1088, 1475, 1777, 1917, 1931, 1940, 2303, 2369
HpyF3I CTNAG 7 cut(s) 249, 879, 1320, 1386, 1772, 2283, 2348
HpySE526I ACGT 4 cut(s) 25, 358, 663, 1078
HspAI GCGC 2 cut(s) 1313, 1960
Kpn2I TCCGGA 2 cut(s) 2254, 2523
Kzo9I GATC 4 cut(s) 73, 517, 1302, 1836
LguI GCTCTTC 1 cut(s) 1081
LmnI GCTCC 3 cut(s) 1398, 1570, 2053
LweI GCATC 7 cut(s) 683, 796, 892, 1073, 1261, 1380, 1651
MaeI CTAG 7 cut(s) 195, 755, 762, 768, 1343, 1454, 1560
MaeII ACGT 4 cut(s) 25, 358, 663, 1078
MalI GATC 4 cut(s) 75, 519, 1304, 1838
MboI GATC 4 cut(s) 73, 517, 1302, 1836
MflI RGATCY 2 cut(s) 1302, 1836
MhlI GDGCHC 2 cut(s) 1567, 2179
MlsI TGGCCA 1 cut(s) 932
MluNI TGGCCA 1 cut(s) 932
MlyI GAGTC 1 cut(s) 752
MmeI TCCRAC 3 cut(s) 415, 2249, 2304
Mox20I TGGCCA 1 cut(s) 932
Mph1103I ATGCAT 1 cut(s) 1758
MroI TCCGGA 2 cut(s) 2254, 2523
MroXI GAANNNNTTC 5 cut(s) 468, 712, 2012, 2421, 2580
MscI TGGCCA 1 cut(s) 932
MslI CAYNNNNRTG 7 cut(s) 128, 308, 489, 1409, 1656, 1809, 2466
Msp20I TGGCCA 1 cut(s) 932
MspA1I CMGCKG 1 cut(s) 1475
MspI CCGG 4 cut(s) 1921, 2255, 2399, 2524
MspR9I CCNGG 4 cut(s) 831, 966, 1107, 1922
Mva1269I GAATGC 1 cut(s) 2363
MvaI CCWGG 3 cut(s) 831, 966, 1107
MwoI GCNNNNNNNGC 8 cut(s) 1088, 1475, 1777, 1917, 1931, 1940, 2303, 2369
NciI CCSGG 1 cut(s) 1922
NcoI CCATGG 3 cut(s) 1221, 1353, 1840
NdeI CATATG 2 cut(s) 553, 1459
NdeII GATC 4 cut(s) 73, 517, 1302, 1836
NlaIV GGNNCC 1 cut(s) 1838
NmuCI GTSAC 8 cut(s) 316, 590, 955, 1109, 1199, 1333, 2198, 2218
NsiI ATGCAT 1 cut(s) 1758
NspI RCATGY 2 cut(s) 261, 2101
OliI CACNNNNGTG 1 cut(s) 2466
PceI AGGCCT 1 cut(s) 1911
PciSI GCTCTTC 1 cut(s) 1081
PctI GAATGC 1 cut(s) 2363
PdmI GAANNNNTTC 5 cut(s) 468, 712, 2012, 2421, 2580
PfeI GAWTC 4 cut(s) 602, 695, 722, 2428
PflMI CCANNNNNTGG 1 cut(s) 2231
PleI GAGTC 1 cut(s) 752
PpsI GAGTC 1 cut(s) 752
Ppu21I YACGTR 1 cut(s) 359
PshAI GACNNNNGTC 1 cut(s) 2142
PshBI ATTAAT 1 cut(s) 2274
PsiI TTATAA 1 cut(s) 1434
Psp6I CCWGG 3 cut(s) 829, 964, 1105
PspGI CCWGG 3 cut(s) 829, 964, 1105
PspN4I GGNNCC 1 cut(s) 1838
PspPI GGNCC 3 cut(s) 1103, 1923, 2234
PstI CTGCAG 2 cut(s) 874, 1480
PstNI CAGNNNCTG 1 cut(s) 1106
PsuI RGATCY 2 cut(s) 1302, 1836
PvuII CAGCTG 1 cut(s) 1475
RsaI GTAC 7 cut(s) 50, 326, 1047, 1452, 2066, 2208, 2386
RsaNI GTAC 7 cut(s) 49, 325, 1046, 1451, 2065, 2207, 2385
RseI CAYNNNNRTG 7 cut(s) 128, 308, 489, 1409, 1656, 1809, 2466
SapI GCTCTTC 1 cut(s) 1081
Sau3AI GATC 4 cut(s) 73, 517, 1302, 1836
Sau96I GGNCC 3 cut(s) 1103, 1923, 2234
ScaI AGTACT 2 cut(s) 50, 1452
SchI GAGTC 1 cut(s) 752
ScrFI CCNGG 4 cut(s) 831, 966, 1107, 1922
SduI GDGCHC 2 cut(s) 1567, 2179
SfaNI GCATC 7 cut(s) 683, 796, 892, 1073, 1261, 1380, 1651
SfcI CTRYAG 3 cut(s) 69, 870, 1476
SinI GGWCC 1 cut(s) 2234
SmiMI CAYNNNNRTG 7 cut(s) 128, 308, 489, 1409, 1656, 1809, 2466
SmlI CTYRAG 1 cut(s) 1996
SmoI CTYRAG 1 cut(s) 1996
SnaBI TACGTA 1 cut(s) 359
SseBI AGGCCT 1 cut(s) 1911
SsiI CCGC 4 cut(s) 1120, 1687, 1821, 2023
SspI AATATT 2 cut(s) 1498, 2057
SspMI CTAG 7 cut(s) 195, 755, 762, 768, 1343, 1454, 1560
StuI AGGCCT 1 cut(s) 1911
StyD4I CCNGG 4 cut(s) 829, 964, 1105, 1920
StyI CCWWGG 3 cut(s) 1221, 1353, 1840
TaiI ACGT 4 cut(s) 28, 361, 666, 1081
TaqI TCGA 6 cut(s) 984, 1155, 2019, 2118, 2413, 2574
TatI WGTACW 3 cut(s) 48, 1450, 2064
TauI GCSGC 1 cut(s) 1690
TfiI GAWTC 4 cut(s) 602, 695, 722, 2428
TseFI GTSAC 8 cut(s) 316, 590, 955, 1109, 1199, 1333, 2198, 2218
Tsp45I GTSAC 8 cut(s) 316, 590, 955, 1109, 1199, 1333, 2198, 2218
Van91I CCANNNNNTGG 1 cut(s) 2231
VneI GTGCAC 1 cut(s) 2175
VpaK11BI GGWCC 1 cut(s) 2234
VspI ATTAAT 1 cut(s) 2274
XagI CCTNNNNNAGG 1 cut(s) 1194
XapI RAATTY 5 cut(s) 276, 1555, 1639, 1826, 2542
XbaI TCTAGA 2 cut(s) 194, 754
XceI RCATGY 2 cut(s) 261, 2101
XmiI GTMKAC 1 cut(s) 210
XmnI GAANNNNTTC 5 cut(s) 468, 712, 2012, 2421, 2580
XspI CTAG 7 cut(s) 195, 755, 762, 768, 1343, 1454, 1560
ZrmI AGTACT 2 cut(s) 50, 1452
Zsp2I ATGCAT 1 cut(s) 1758
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.