Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0012607.1

Orthogroup ID

OG0000599

Physical Location & Seq

Genomic Coordinates Forward (+)

1 .. 3186

Gene Structure 3186 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0012607.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2293 bp

agcagctcagcgtcatgtatttgaaaaagtcaaggagggggaacgacttcttgttgtggcgactaatgtggctgaaacctctttaactatacctgggataaagtatgtagtcgacactggaaaagtgaaagtgaaggactacaatttctcaaatggcatggaaacatataaagtacagtggattagtaaggcatcagctattcaacgcgaaggaagagctggaagaacagggcctggccactgtttccgcttgtattcttctgcagtatatgacaatgagtttctagactgttccgaagctgaaatatccaaagtccctgttgatggtgttctccttcttatgaaggctatgaaaataccggtatccaaatttcagtttcctactcctccaaatggtgatactattgatgaagcagaggatcgtttgaagctcctcaaagcacttgatagcaatggagaggtgacacctttagggaaggccatggcttattaccccataagtcctcgccaatctaagatgctccttacggtcattgaaatcctgaatatgaagcaaagttattcccgagctaatttagtgctagcatatgcagttgcagcagctgcagctttgagtgtgtctaatccttttgacagtccatttgaagatattaacagtgagtatatggatcagcaagagatactgattagcaggaagaaactgaaagtgtcttctgaaaattttcatagtagcggcagtgatgctctgtcaagagcttatgctttgcgaggctatgaactttccaagagccaaatgggtttctgcaaggaaaatgctctacacccggaaaccatggaggaaatatccaagctgagaaagcagctcctcaaacttgtctttaatccaaatggtgtttcaggaggtgtgaaggaattttcgtggatctatggtagtcagaaagatgttgaaactgtttggagggatgatgagaagcttctctcagtcaatgaggaacagctcttacaccaagctatctgtgctggttggatagatagggttgccaaacgcattgaaggaagtgcatatcaggcctgcatggtcaaagagactgttcctccactggcgtgtcactccacctttggtcgtgttcaacggtgggagcttccacaacattctttgccaattagtaattttgatcatacaggcgcagttcaagcttttgcttttgcttttgctttgcttgatggcaaggttttgcattgccttagacctctgcgtgagtccatggcagaatgtcctcacactgttttaaggccagagacagcaggtcgagaacgggttcataatctcttggcgaagctggggaagaaaaagatagtcagccgtgctatgttgatagaggtgtggaaggaaaatcccactgaattgtatccggaaatccggagctggtttaaggagagtttccaccagaagtttagggaaatttgggtcaagatgctttatgaagcccttttgcggaacagcagtgatgctctgtcaagagcttatgctttgcgaggctatgaactttccaagagccaaatgggtttctgcaaggaaaatgctctacacccggaaaccatggaggaaatatccaagctgagaaagcagctcctcaaacttgtctttaatccaaatggtgtttctggaggtgtgaaggaattttcgtggatctatggtagtcagaaagatgttgaaactgtttggagggatgatgagaggcttctctcagtcaatgaggaacagctcttgcaccaagctatctgtgctggttggatagatagggttgccaaacgcattgaaggaagtgcatatcaggcctgcatggtcaaagagactgtgttcctccactggcggtcacctgtttctaaaattgctcctgagtttttggtgtacagtgagttgatccagacaaagaaacctttcatgtacggcattacttgtgtcagtccagattggctcgtcaagtatggtctgcttgctatgtatgatcagcgcttgtgcactttttcaaaagaaactccgccttactatgaccgtcaaactgacaaactattatacagtgtcactccacctttggtcgtgttcaacggcgcagttcaagcttttgcttttgcttttgctttgctcgatggcaaggttttgcattgccttagacctctgcgtgagtccatggcagaacgtcctcacactgttttaaggccagagacagcaggtcgagaacgggttcataatctcttggcgaagctggggaagaaaaagatagaggtttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010467 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD HA2 Helicase_C OB_NTP_bind

Protein Analysis

763

Amino Acids

86.48

Weight (kDa)

8.83

Isoelectric Point (pI)

42.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000599)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33390 AT1G33390
fragaria_vesca	FvH4_3g40090 FvH4_3g40090 FvH4_3g40090 FvH4_6g48600
malus_domestica	MD04G1241500.v1.1 MD05G1017800.v1.1
prunus_persica	Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1
pyrus_communis	pycom04g21310 pycom05g01000 pycom05g01050 pycom11g20470
rosa_chinensis	RchiOBHm_Chr2g0168421 RchiOBHm_Chr2g0168431 RchiOBHm_Chr2g0168441 RchiOBHm_Chr2g0168451 RchiOBHm_Chr2g0168461 RchiOBHm_Chr4g0407811 RchiOBHm_Chr7g0220161 RchiOBHm_Chr7g0220171 RchiOBHm_Chr7g0220481
rosa_laevigata	RLG00000002253 RLG00000008696 RLG00000021781
rosa_multiflora	Rmu_co8232135.1_g000001 Rmu_sc0000966.1_g000007 Rmu_sc0003573.1_g000032 Rmu_sc0006361.1_g000012 Rmu_sc0006361.1_g000013 Rmu_sc0012607.1_g000001 Rmu_sc0016657.1_g000009
rosa_roxburghii	Rroxscaffold_2G00083000 Rroxscaffold_2G00083010 Rroxscaffold_3G00239750 Rroxscaffold_5G00352370
rosa_rugosa	Rorug02G0533800 Rorug02G0533800 Rorug04G0081400 Rorug07G0189900 Rorug07G0190000
rosa_samantha	Rh2AG603500 Rh2AG603700 Rh2BG616600 Rh2BG616700 Rh2BG616800 Rh2CG584500 Rh2CG584600 Rh2CG584700 Rh2DG627100 Rh2DG627200 Rh4AG146500 Rh4BG144000 Rh4CG153000 Rh4DG140500 Rh7AG332900 Rh7BG324300 Rh7BG324400 Rh7BG324500 Rh7CG350400 Rh7DG329000
rosa_wichuraiana	Rw0G022710 Rw2G050050 Rw4G011990 Rw7G028060 Rw7G028070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1296, 2223
AccI	GTMKAC	1 cut(s)	112
AccII	CGCG	1 cut(s)	208
AccIII	TCCGGA	2 cut(s)	1412, 1420
AciI	CCGC	5 cut(s)	248, 733, 1496, 1874, 2043
AclWI	GGATC	5 cut(s)	427, 676, 930, 1698, 1919
AcoI	YGGCCR	1 cut(s)	236
AcsI	RAATTY	5 cut(s)	369, 719, 912, 1462, 1680
AfaI	GTAC	3 cut(s)	175, 1914, 1950
AfeI	AGCGCT	1 cut(s)	2016
AfiI	CCNNNNNNNGG	3 cut(s)	324, 393, 1495
AgeI	ACCGGT	1 cut(s)	359
AhdI	GACNNNNNGTC	2 cut(s)	1306, 2233
AjnI	CCWGG	2 cut(s)	92, 233
AjuI	GAANNNNNNNTTGG	4 cut(s)	878, 910, 1646, 1678
AleI	CACNNNNGTG	1 cut(s)	1103
Alw21I	GWGCWC	1 cut(s)	2025
Alw26I	GTCTC	4 cut(s)	1080, 1293, 1848, 2220
Alw44I	GTGCAC	1 cut(s)	2021
AlwI	GGATC	5 cut(s)	427, 676, 930, 1698, 1919
AlwNI	CAGNNNCTG	2 cut(s)	234, 603
Ama87I	CYCGRG	1 cut(s)	565
Aor13HI	TCCGGA	2 cut(s)	1412, 1420
Aor51HI	AGCGCT	1 cut(s)	2016
AoxI	GGCC	7 cut(s)	231, 236, 478, 1069, 1293, 1837, 2220
ApaLI	GTGCAC	1 cut(s)	2021
ApeKI	GCWGC	7 cut(s)	3, 597, 600, 603, 606, 860, 1628
ApoI	RAATTY	5 cut(s)	369, 719, 912, 1462, 1680
ArsI	GACNNNNNNTTYG	2 cut(s)	624, 656
AsiGI	ACCGGT	1 cut(s)	359
Asp700I	GAANNNNTTC	5 cut(s)	46, 721, 1318, 1941, 2245
AspLEI	GCGC	3 cut(s)	1188, 2017, 2115
AspS9I	GGNCC	1 cut(s)	231
AsuC2I	CCSGG	2 cut(s)	825, 1593
AsuHPI	GGTGA	3 cut(s)	408, 473, 1870
AsuNHI	GCTAGC	1 cut(s)	581
AvaI	CYCGRG	1 cut(s)	565
BaeGI	GKGCMC	1 cut(s)	2025
BalI	TGGCCA	1 cut(s)	238
BbsI	GAAGAC	1 cut(s)	703
Bbv12I	GWGCWC	1 cut(s)	2025
BbvI	GCAGC	7 cut(s)	15, 590, 609, 612, 618, 872, 1640
BccI	CCATC	3 cut(s)	318, 1218, 2145
BceAI	ACGGC	3 cut(s)	1348, 1967, 2126
BciT130I	CCWGG	2 cut(s)	94, 235
BciVI	GTATCC	2 cut(s)	374, 1420
BclI	TGATCA	2 cut(s)	1175, 2009
BcnI	CCSGG	2 cut(s)	825, 1593
BcoDI	GTCTC	4 cut(s)	1080, 1293, 1848, 2220
BfaI	CTAG	2 cut(s)	285, 582
BfmI	CTRYAG	2 cut(s)	262, 604
BfoI	RGCGCY	1 cut(s)	2018
BfuAI	ACCTGC	2 cut(s)	1296, 2223
BfuI	GTATCC	2 cut(s)	374, 1420
BisI	GCNGC	8 cut(s)	4, 598, 601, 604, 607, 734, 861, 1629
BlpI	GCTNAGC	1 cut(s)	7
BlsI	GCNGC	8 cut(s)	5, 599, 602, 605, 608, 735, 862, 1630
Bme1390I	CCNGG	4 cut(s)	94, 235, 825, 1593
BmeRI	GACNNNNNGTC	2 cut(s)	1306, 2233
BmeT110I	CYCGRG	1 cut(s)	565
BmgT120I	GGNCC	1 cut(s)	231
BmrFI	CCNGG	4 cut(s)	94, 235, 825, 1593
BmsI	GCATC	5 cut(s)	201, 508, 731, 1465, 1499
BmtI	GCTAGC	1 cut(s)	585
BpiI	GAAGAC	1 cut(s)	703
BpmI	CTGGAG	1 cut(s)	1687
Bpu1102I	GCTNAGC	1 cut(s)	7
BpuMI	CCSGG	2 cut(s)	825, 1593
BsaJI	CCNNGG	6 cut(s)	93, 481, 832, 1264, 1600, 2191
BsaWI	WCCGGW	3 cut(s)	359, 1412, 1420
BsaXI	ACNNNNNCTCC	2 cut(s)	1079, 1109
Bsc4I	CCNNNNNNNGG	3 cut(s)	324, 393, 1495
Bse118I	RCCGGY	1 cut(s)	359
Bse1I	ACTGG	3 cut(s)	122, 1105, 1875
Bse3DI	GCAATG	3 cut(s)	458, 1238, 2165
BseAI	TCCGGA	2 cut(s)	1412, 1420
BseBI	CCWGG	2 cut(s)	94, 235
BseDI	CCNNGG	6 cut(s)	93, 481, 832, 1264, 1600, 2191
BseGI	GGATG	2 cut(s)	968, 1736
BseLI	CCNNNNNNNGG	3 cut(s)	324, 393, 1495
BseMI	GCAATG	3 cut(s)	458, 1238, 2165
BseMII	CTCAG	6 cut(s)	21, 843, 994, 1611, 1762, 1891
BseNI	ACTGG	3 cut(s)	122, 1105, 1875
BseRI	GAGGAG	4 cut(s)	376, 423, 855, 1623
BseSI	GKGCMC	1 cut(s)	2025
BseXI	GCAGC	7 cut(s)	15, 590, 609, 612, 618, 872, 1640
BseYI	CCCAGC	2 cut(s)	1340, 2267
Bsh1236I	CGCG	1 cut(s)	208
BshFI	GGCC	7 cut(s)	233, 238, 480, 1071, 1295, 1839, 2222
BshTI	ACCGGT	1 cut(s)	359
BsiHKAI	GWGCWC	1 cut(s)	2025
BsiHKCI	CYCGRG	1 cut(s)	565
BsiSI	CCGG	5 cut(s)	360, 825, 1413, 1421, 1593
BslFI	GGGAC	1 cut(s)	300
BslI	CCNNNNNNNGG	3 cut(s)	324, 393, 1495
BsmAI	GTCTC	4 cut(s)	1080, 1293, 1848, 2220
BsmFI	GGGAC	1 cut(s)	300
BsnI	GGCC	7 cut(s)	233, 238, 480, 1071, 1295, 1839, 2222
BsoBI	CYCGRG	1 cut(s)	565
Bsp1286I	GDGCHC	1 cut(s)	2025
Bsp13I	TCCGGA	2 cut(s)	1412, 1420
Bsp1407I	TGTACA	1 cut(s)	1912
Bsp143I	GATC	7 cut(s)	419, 668, 922, 1175, 1690, 1924, 2009
Bsp1720I	GCTNAGC	1 cut(s)	7
Bsp19I	CCATGG	5 cut(s)	481, 832, 1264, 1600, 2191
BspACI	CCGC	5 cut(s)	248, 733, 1496, 1874, 2043
BspANI	GGCC	7 cut(s)	233, 238, 480, 1071, 1295, 1839, 2222
BspCNI	CTCAG	6 cut(s)	20, 844, 993, 1612, 1761, 1892
BspEI	TCCGGA	2 cut(s)	1412, 1420
BspFNI	CGCG	1 cut(s)	208
BspMAI	CTGCAG	2 cut(s)	266, 608
BspMI	ACCTGC	2 cut(s)	1296, 2223
BspOI	GCTAGC	1 cut(s)	585
BspPI	GGATC	5 cut(s)	427, 676, 930, 1698, 1919
BspQI	GCTCTTC	1 cut(s)	209
BsrDI	GCAATG	3 cut(s)	458, 1238, 2165
BsrFI	RCCGGY	1 cut(s)	359
BsrGI	TGTACA	1 cut(s)	1912
BsrI	ACTGG	3 cut(s)	122, 1105, 1875
BssAI	RCCGGY	1 cut(s)	359
BssECI	CCNNGG	6 cut(s)	93, 481, 832, 1264, 1600, 2191
BssMI	GATC	7 cut(s)	419, 668, 922, 1175, 1690, 1924, 2009
BssT1I	CCWWGG	5 cut(s)	481, 832, 1264, 1600, 2191
Bst2UI	CCWGG	2 cut(s)	94, 235
Bst6I	CTCTTC	1 cut(s)	209
BstAPI	GCANNNNNTGC	1 cut(s)	603
BstAUI	TGTACA	1 cut(s)	1912
BstC8I	GCNNGC	4 cut(s)	583, 1073, 1841, 1999
BstDEI	CTNAG	9 cut(s)	7, 514, 852, 980, 1245, 1620, 1748, 1900, 2172
BstDSI	CCRYGG	5 cut(s)	481, 832, 1264, 1600, 2191
BstEII	GGTNACC	1 cut(s)	1876
BstF5I	GGATG	2 cut(s)	968, 1736
BstFNI	CGCG	1 cut(s)	208
BstH2I	RGCGCY	1 cut(s)	2018
BstHHI	GCGC	3 cut(s)	1188, 2017, 2115
BstKTI	GATC	7 cut(s)	422, 671, 925, 1178, 1693, 1927, 2012
BstMAI	GTCTC	4 cut(s)	1080, 1293, 1848, 2220
BstMBI	GATC	7 cut(s)	419, 668, 922, 1175, 1690, 1924, 2009
BstNI	CCWGG	2 cut(s)	94, 235
BstPI	GGTNACC	1 cut(s)	1876
BstSCI	CCNGG	4 cut(s)	92, 233, 823, 1591
BstSFI	CTRYAG	2 cut(s)	262, 604
BstSLI	GKGCMC	1 cut(s)	2025
BstUI	CGCG	1 cut(s)	208
BstV1I	GCAGC	7 cut(s)	15, 590, 609, 612, 618, 872, 1640
BstV2I	GAAGAC	1 cut(s)	703
BstX2I	RGATCY	2 cut(s)	922, 1690
BstYI	RGATCY	2 cut(s)	922, 1690
BsuI	GTATCC	2 cut(s)	374, 1420
BsuRI	GGCC	7 cut(s)	233, 238, 480, 1071, 1295, 1839, 2222
BtgI	CCRYGG	5 cut(s)	481, 832, 1264, 1600, 2191
BtsCI	GGATG	2 cut(s)	968, 1736
BtsI	GCAGTG	2 cut(s)	743, 1511
BveI	ACCTGC	2 cut(s)	1296, 2223
Cac8I	GCNNGC	4 cut(s)	583, 1073, 1841, 1999
CaiI	CAGNNNCTG	2 cut(s)	234, 603
CfoI	GCGC	3 cut(s)	1188, 2017, 2115
Cfr10I	RCCGGY	1 cut(s)	359
Cfr13I	GGNCC	1 cut(s)	231
Csp6I	GTAC	3 cut(s)	174, 1913, 1949
CspAI	ACCGGT	1 cut(s)	359
CviQI	GTAC	3 cut(s)	174, 1913, 1949
DdeI	CTNAG	9 cut(s)	7, 514, 852, 980, 1245, 1620, 1748, 1900, 2172
DpnI	GATC	7 cut(s)	421, 670, 924, 1177, 1692, 1926, 2011
DpnII	GATC	7 cut(s)	419, 668, 922, 1175, 1690, 1924, 2009
DriI	GACNNNNNGTC	2 cut(s)	1306, 2233
EaeI	YGGCCR	1 cut(s)	236
Eam1104I	CTCTTC	1 cut(s)	209
Eam1105I	GACNNNNNGTC	2 cut(s)	1306, 2233
EarI	CTCTTC	1 cut(s)	209
EciI	GGCGGA	1 cut(s)	2032
Eco130I	CCWWGG	5 cut(s)	481, 832, 1264, 1600, 2191
Eco147I	AGGCCT	2 cut(s)	1071, 1839
Eco47III	AGCGCT	1 cut(s)	2016
Eco88I	CYCGRG	1 cut(s)	565
Eco91I	GGTNACC	1 cut(s)	1876
EcoO109I	RGGNCCY	1 cut(s)	231
EcoO65I	GGTNACC	1 cut(s)	1876
EcoRII	CCWGG	2 cut(s)	92, 233
EcoT14I	CCWWGG	5 cut(s)	481, 832, 1264, 1600, 2191
ErhI	CCWWGG	5 cut(s)	481, 832, 1264, 1600, 2191
FaqI	GGGAC	1 cut(s)	300
FauNDI	CATATG	1 cut(s)	587
FbaI	TGATCA	2 cut(s)	1175, 2009
FblI	GTMKAC	1 cut(s)	112
Fnu4HI	GCNGC	8 cut(s)	4, 598, 601, 604, 607, 734, 861, 1629
FokI	GGATG	2 cut(s)	975, 1743
Fsp4HI	GCNGC	8 cut(s)	4, 598, 601, 604, 607, 734, 861, 1629
FspBI	CTAG	2 cut(s)	285, 582
GlaI	GCGC	3 cut(s)	1187, 2016, 2114
GluI	GCNGC	8 cut(s)	4, 598, 601, 604, 607, 734, 861, 1629
GsaI	CCCAGC	2 cut(s)	1344, 2271
GsuI	CTGGAG	1 cut(s)	1687
HaeII	RGCGCY	1 cut(s)	2018
HaeIII	GGCC	7 cut(s)	233, 238, 480, 1071, 1295, 1839, 2222
HapII	CCGG	5 cut(s)	360, 825, 1413, 1421, 1593
HhaI	GCGC	3 cut(s)	1188, 2017, 2115
Hin6I	GCGC	3 cut(s)	1186, 2015, 2113
HinP1I	GCGC	3 cut(s)	1186, 2015, 2113
HincII	GTYRAC	1 cut(s)	113
HindII	GTYRAC	1 cut(s)	113
HindIII	AAGCTT	3 cut(s)	972, 1195, 2122
HinfI	GANTC	2 cut(s)	1260, 2187
HpaII	CCGG	5 cut(s)	360, 825, 1413, 1421, 1593
HphI	GGTGA	3 cut(s)	408, 473, 1870
Hpy166II	GTNNAC	3 cut(s)	113, 1913, 2023
Hpy188I	TCNGA	4 cut(s)	296, 716, 937, 1705
Hpy8I	GTNNAC	3 cut(s)	113, 1913, 2023
HpyCH4IV	ACGT	1 cut(s)	2201
HpyF3I	CTNAG	9 cut(s)	7, 514, 852, 980, 1245, 1620, 1748, 1900, 2172
HpySE526I	ACGT	1 cut(s)	2201
HspAI	GCGC	3 cut(s)	1186, 2015, 2113
Kpn2I	TCCGGA	2 cut(s)	1412, 1420
Ksp22I	TGATCA	2 cut(s)	1175, 2009
Kzo9I	GATC	7 cut(s)	419, 668, 922, 1175, 1690, 1924, 2009
LguI	GCTCTTC	1 cut(s)	209
LmnI	GCTCC	7 cut(s)	436, 526, 868, 1139, 1423, 1636, 1901
Lsp1109I	GCAGC	7 cut(s)	15, 590, 609, 612, 618, 872, 1640
LweI	GCATC	5 cut(s)	201, 508, 731, 1465, 1499
MaeI	CTAG	2 cut(s)	285, 582
MaeII	ACGT	1 cut(s)	2201
MaeIII	GTNAC	4 cut(s)	461, 1107, 1876, 2084
MalI	GATC	7 cut(s)	421, 670, 924, 1177, 1692, 1926, 2011
MboI	GATC	7 cut(s)	419, 668, 922, 1175, 1690, 1924, 2009
MboII	GAAGA	8 cut(s)	226, 235, 250, 657, 703, 707, 1358, 2285
MflI	RGATCY	2 cut(s)	922, 1690
MhlI	GDGCHC	1 cut(s)	2025
MlsI	TGGCCA	1 cut(s)	238
MluNI	TGGCCA	1 cut(s)	238
MlyI	GAGTC	2 cut(s)	1269, 2196
MmeI	TCCRAC	2 cut(s)	1005, 1773
Mox20I	TGGCCA	1 cut(s)	238
MroI	TCCGGA	2 cut(s)	1412, 1420
MroXI	GAANNNNTTC	5 cut(s)	46, 721, 1318, 1941, 2245
MscI	TGGCCA	1 cut(s)	238
MseI	TTAA	8 cut(s)	84, 652, 880, 1290, 1432, 1648, 2217, 2291
MslI	CAYNNNNRTG	1 cut(s)	1103
Msp20I	TGGCCA	1 cut(s)	238
MspA1I	CMGCKG	1 cut(s)	603
MspI	CCGG	5 cut(s)	360, 825, 1413, 1421, 1593
MspR9I	CCNGG	4 cut(s)	94, 235, 825, 1593
MvaI	CCWGG	2 cut(s)	94, 235
MvnI	CGCG	1 cut(s)	208
NciI	CCSGG	2 cut(s)	825, 1593
NcoI	CCATGG	5 cut(s)	481, 832, 1264, 1600, 2191
NdeI	CATATG	1 cut(s)	587
NdeII	GATC	7 cut(s)	419, 668, 922, 1175, 1690, 1924, 2009
NheI	GCTAGC	1 cut(s)	581
NmuCI	GTSAC	4 cut(s)	461, 1107, 1876, 2084
OliI	CACNNNNGTG	1 cut(s)	1103
PceI	AGGCCT	2 cut(s)	1071, 1839
PciSI	GCTCTTC	1 cut(s)	209
PdmI	GAANNNNTTC	5 cut(s)	46, 721, 1318, 1941, 2245
PinAI	ACCGGT	1 cut(s)	359
PkrI	GCNGC	8 cut(s)	5, 599, 602, 605, 608, 735, 862, 1630
PleI	GAGTC	2 cut(s)	1268, 2195
PpsI	GAGTC	2 cut(s)	1268, 2195
Psp6I	CCWGG	2 cut(s)	92, 233
PspEI	GGTNACC	1 cut(s)	1876
PspFI	CCCAGC	2 cut(s)	1340, 2267
PspGI	CCWGG	2 cut(s)	92, 233
PspPI	GGNCC	1 cut(s)	231
PsrI	GAACNNNNNNTAC	2 cut(s)	985, 1017
PstI	CTGCAG	2 cut(s)	266, 608
PstNI	CAGNNNCTG	2 cut(s)	234, 603
PsuI	RGATCY	2 cut(s)	922, 1690
PvuII	CAGCTG	1 cut(s)	603
RsaI	GTAC	3 cut(s)	175, 1914, 1950
RsaNI	GTAC	3 cut(s)	174, 1913, 1949
RseI	CAYNNNNRTG	1 cut(s)	1103
SalI	GTCGAC	1 cut(s)	111
SapI	GCTCTTC	1 cut(s)	209
SaqAI	TTAA	8 cut(s)	84, 652, 880, 1290, 1432, 1648, 2217, 2291
SatI	GCNGC	8 cut(s)	4, 598, 601, 604, 607, 734, 861, 1629
Sau3AI	GATC	7 cut(s)	419, 668, 922, 1175, 1690, 1924, 2009
Sau96I	GGNCC	1 cut(s)	231
SchI	GAGTC	2 cut(s)	1269, 2196
ScrFI	CCNGG	4 cut(s)	94, 235, 825, 1593
SduI	GDGCHC	1 cut(s)	2025
SfaNI	GCATC	5 cut(s)	201, 508, 731, 1465, 1499
SfcI	CTRYAG	2 cut(s)	262, 604
SmiMI	CAYNNNNRTG	1 cut(s)	1103
SseBI	AGGCCT	2 cut(s)	1071, 1839
SsiI	CCGC	5 cut(s)	248, 733, 1496, 1874, 2043
SspMI	CTAG	2 cut(s)	285, 582
StuI	AGGCCT	2 cut(s)	1071, 1839
StyD4I	CCNGG	4 cut(s)	92, 233, 823, 1591
StyI	CCWWGG	5 cut(s)	481, 832, 1264, 1600, 2191
TaiI	ACGT	1 cut(s)	2204
TaqI	TCGA	4 cut(s)	112, 1310, 2149, 2237
TatI	WGTACW	2 cut(s)	173, 1912
TauI	GCSGC	1 cut(s)	736
Tru1I	TTAA	8 cut(s)	84, 652, 880, 1290, 1432, 1648, 2217, 2291
Tru9I	TTAA	8 cut(s)	84, 652, 880, 1290, 1432, 1648, 2217, 2291
TseFI	GTSAC	4 cut(s)	461, 1107, 1876, 2084
TseI	GCWGC	7 cut(s)	3, 597, 600, 603, 606, 860, 1628
Tsp45I	GTSAC	4 cut(s)	461, 1107, 1876, 2084
VneI	GTGCAC	1 cut(s)	2021
XapI	RAATTY	5 cut(s)	369, 719, 912, 1462, 1680
XbaI	TCTAGA	1 cut(s)	284
XcmI	CCANNNNNNNNNTGG	2 cut(s)	791, 1559
XmiI	GTMKAC	1 cut(s)	112
XmnI	GAANNNNTTC	5 cut(s)	46, 721, 1318, 1941, 2245
XspI	CTAG	2 cut(s)	285, 582

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.