Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0000599

Physical Location & Seq

Genomic Coordinates Reverse (-)

31996581 .. 32000397

Gene Structure 3817 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG324500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1773 bp

ATGAACATGTTGCCAGACAAGAGAAGGAATAATAAAAGAAAGCGAACCAATGAGGAATGTCAGAAACTTAGAGAAACCCAGAGGAGGATGAGCACATCTCACAAAAGGAAGCTCAAGAAGTTGAAGGAGGAGAAGGAAAACGACCTTGTGCTATCAAAAAGCGTTGAGGCGTTAGACAAGAAATATAAGATTCCAGAGGGTGCACGGGCTCTTCTCCGGTCATCACGAAATATTGGCCAGGTTGAGTCCAGAAAGGTTAAACGCAGCAAAGGTTTACTGCACTTGAAACTTACATCCCATGCTTCCAGTGAAAGTGAACCTGAGTCGGAAATAACTCAATCAACACAGGATCAATCGTTAATGGTACAAAAGAACACGTCTACTTGTTCGGACTCCTCTACAATGCTACTTTGTGGCACAAGGCCTCCTGATATTCATAACAACTCTTTACCAGAAGATGGAACTTCTAGCATGGATCATAACTGGAGTGAAAGCATAAACTTCATGGATAAAGTAGAAGAGAGTCCTGAGTCAAGTTACAGCTCAAAGCTTCCTGCACCAAGTATTCTGAAAGATCCAAAAAATAGGCGGCATGTATCAAGACCTCCTGAAGTGGTAAAGGCAAGGAGTGATATTCCTATTATAATGATGGAGCAAGAGATAATGGAGGCCATAAATGAAAATTCCACTGTTATTATACGCGGAGAGACTGGATGTGGTAAAACAACCCAAGTTCCACAGTTTCTTTATGAAGTTGGCATTGGTTCAAGTGTGTCTCCTCTTGGAAGTGGTATCCTTGGTGTTACTCAACCCCGTCGCATTGCAGTCTATGCTACTGCTAGTCGTGTGGCATATGAGCTTGGTGTACGCGTGGGTGAGGAGGTTGGGTATCAAGTTAGATATGACAAAAAGATAGGCAAAAGTTGCTCCATCAACTTCATGACGGATGGATTATTGCTACAAGAACTCCAGGGTGATTTTTGGTTGAAGAGATACTCTGTGATAATTCTCGATGAGGTTCATGAGCAGAACTTGAGCACAGATACACTCATTGGAATGCTTTCACGTGTTATCATTTGTCGTCAGAAAGAGTATGAACGTCAGCAGGAGTTTTTGCAGCAGTACTCGCATTTAGGAATATCTATAGATCGGGAGAAACTTGTTTTTCCACTGAAGCTTGTGCTCATGAGTGCTACCATGCCAGTGGAAGACTTCATTTCTTATAGGAAGCTGTTTCCTGACCCCCCACAAGAGATAAATGTTTTGTCTAGACAATTTAAAGTAGACATTCAGTTCTCGACGACAACTAAAGCTGATTATACTAAGGAAGCATGTAAAAAGGTCTTGGAAATTCACAAGAATATGCCACAAGGAGGCATACTTGTGTTTGTCACTGGGTACTGGGAAGTGGAGGTATTGTGTACAAAGCTACGTAGAGCTTCAAGGGAACTGACTATGAAAAAAAAAAAAGGGTGTTGTGTGATGGAAGGTTCTGTAATAAACTCTGTTGGAGAGATAAATATGAAGGAGAACAGCGAAGCATTTCATTCAGCCAACCATCAGAATGATGTATTTAGTTACACTGATGAAGATCAGTGCGAGGTAGATGACGATGAGTTTGGTTCTTCATATGATACAGAAACAGAGAGTGAGCTGGAAATTATTGGTGATGATAGGGATTCATTGTGTCAAGATGCCCCAGAAGTCAATGGTGAGGTTGCACAGATTTTAGGAGAGAACGTGAGCATTGCATCACTGAAAGCCTCTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010467 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD HA2 Helicase_C OB_NTP_bind

Protein Analysis

590

Amino Acids

66.77

Weight (kDa)

6.01

Isoelectric Point (pI)

52.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	219 - 401	4.7e-07	DEAD/DEAH box helicase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000599)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33390 AT1G33390
fragaria_vesca	FvH4_3g40090 FvH4_3g40090 FvH4_3g40090 FvH4_6g48600
malus_domestica	MD04G1241500.v1.1 MD05G1017800.v1.1
prunus_persica	Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1 Prupe.1G193500_v2.0.a1
pyrus_communis	pycom04g21310 pycom05g01000 pycom05g01050 pycom11g20470
rosa_chinensis	RchiOBHm_Chr2g0168421 RchiOBHm_Chr2g0168431 RchiOBHm_Chr2g0168441 RchiOBHm_Chr2g0168451 RchiOBHm_Chr2g0168461 RchiOBHm_Chr4g0407811 RchiOBHm_Chr7g0220161 RchiOBHm_Chr7g0220171 RchiOBHm_Chr7g0220481
rosa_laevigata	RLG00000002253 RLG00000008696 RLG00000021781
rosa_multiflora	Rmu_co8232135.1_g000001 Rmu_sc0000966.1_g000007 Rmu_sc0003573.1_g000032 Rmu_sc0006361.1_g000012 Rmu_sc0006361.1_g000013 Rmu_sc0012607.1_g000001 Rmu_sc0016657.1_g000009
rosa_roxburghii	Rroxscaffold_2G00083000 Rroxscaffold_2G00083010 Rroxscaffold_3G00239750 Rroxscaffold_5G00352370
rosa_rugosa	Rorug02G0533800 Rorug02G0533800 Rorug04G0081400 Rorug07G0189900 Rorug07G0190000
rosa_samantha	Rh2AG603500 Rh2AG603700 Rh2BG616600 Rh2BG616700 Rh2BG616800 Rh2CG584500 Rh2CG584600 Rh2CG584700 Rh2DG627100 Rh2DG627200 Rh4AG146500 Rh4BG144000 Rh4CG153000 Rh4DG140500 Rh7AG332900 Rh7BG324300 Rh7BG324400 Rh7BG324500 Rh7CG350400 Rh7DG329000
rosa_wichuraiana	Rw0G022710 Rw2G050050 Rw4G011990 Rw7G028060 Rw7G028070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	644
AccB7I	CCANNNNNTGG	1 cut(s)	458
AccI	GTMKAC	2 cut(s)	380, 1284
AccII	CGCG	2 cut(s)	702, 870
AciI	CCGC	2 cut(s)	589, 702
AclWI	GGATC	3 cut(s)	357, 483, 569
AcoI	YGGCCR	1 cut(s)	235
AcsI	RAATTY	2 cut(s)	682, 1350
AcuI	CTGAAG	2 cut(s)	630, 1193
AcvI	CACGTG	1 cut(s)	1067
AfaI	GTAC	5 cut(s)	366, 867, 1124, 1400, 1423
AfiI	CCNNNNNNNGG	3 cut(s)	84, 458, 1373
AflIII	ACRYGT	4 cut(s)	6, 375, 868, 1066
AgsI	TTSAA	5 cut(s)	124, 286, 768, 988, 1443
AjiI	CACGTC	1 cut(s)	378
AjnI	CCWGG	2 cut(s)	237, 969
AjuI	GAANNNNNNNTTGG	2 cut(s)	744, 776
Alw21I	GWGCWC	4 cut(s)	95, 205, 1040, 1185
Alw26I	GTCTC	2 cut(s)	701, 780
Alw44I	GTGCAC	1 cut(s)	201
AlwI	GGATC	3 cut(s)	357, 483, 569
AoxI	GGCC	3 cut(s)	235, 422, 669
ApaLI	GTGCAC	1 cut(s)	201
ApeKI	GCWGC	2 cut(s)	264, 1117
ApoI	RAATTY	2 cut(s)	682, 1350
ArsI	GACNNNNNNTTYG	2 cut(s)	1601, 1633
Asp700I	GAANNNNTTC	2 cut(s)	1060, 1542
AsuHPI	GGTGA	4 cut(s)	887, 986, 1679, 1724
BaeGI	GKGCMC	1 cut(s)	205
BalI	TGGCCA	1 cut(s)	237
BanII	GRGCYC	1 cut(s)	211
BbrPI	CACGTG	1 cut(s)	1067
BbsI	GAAGAC	1 cut(s)	1215
Bbv12I	GWGCWC	4 cut(s)	95, 205, 1040, 1185
BbvI	GCAGC	2 cut(s)	276, 1129
BccI	CCATC	6 cut(s)	452, 643, 938, 941, 1477, 1566
BciT130I	CCWGG	2 cut(s)	239, 971
BciVI	GTATCC	1 cut(s)	803
BcoDI	GTCTC	2 cut(s)	701, 780
BfaI	CTAG	3 cut(s)	468, 840, 1269
BfmI	CTRYAG	1 cut(s)	1143
BfuI	GTATCC	1 cut(s)	803
BisI	GCNGC	3 cut(s)	265, 590, 1118
BlsI	GCNGC	3 cut(s)	266, 591, 1119
BmcAI	AGTACT	1 cut(s)	1124
Bme1390I	CCNGG	2 cut(s)	239, 971
BmgBI	CACGTC	1 cut(s)	378
BmrFI	CCNGG	2 cut(s)	239, 971
BmrI	ACTGGG	2 cut(s)	1404, 1411
BmsI	GCATC	2 cut(s)	1684, 1760
BmuI	ACTGGG	2 cut(s)	1404, 1411
BpiI	GAAGAC	1 cut(s)	1215
BplI	GAGNNNNNCTC	2 cut(s)	82, 114
BpmI	CTGGAG	2 cut(s)	505, 953
BpuEI	CTTGAG	2 cut(s)	98, 1054
BsaAI	YACGTR	2 cut(s)	1067, 1433
BsaBI	GATNNNNATC	1 cut(s)	1590
BsaJI	CCNNGG	2 cut(s)	796, 970
BsaWI	WCCGGW	1 cut(s)	216
Bsc4I	CCNNNNNNNGG	3 cut(s)	84, 458, 1373
Bse1I	ACTGG	6 cut(s)	306, 488, 715, 1202, 1399, 1406
Bse3DI	GCAATG	2 cut(s)	819, 1746
Bse8I	GATNNNNATC	1 cut(s)	1590
BseBI	CCWGG	2 cut(s)	239, 971
BseDI	CCNNGG	2 cut(s)	796, 970
BseGI	GGATG	4 cut(s)	93, 293, 719, 952
BseJI	GATNNNNATC	1 cut(s)	1590
BseLI	CCNNNNNNNGG	3 cut(s)	84, 458, 1373
BseMI	GCAATG	2 cut(s)	819, 1746
BseMII	CTCAG	2 cut(s)	312, 519
BseNI	ACTGG	6 cut(s)	306, 488, 715, 1202, 1399, 1406
BseRI	GAGGAG	5 cut(s)	97, 143, 385, 768, 893
BseSI	GKGCMC	1 cut(s)	205
BseXI	GCAGC	2 cut(s)	276, 1129
BsgI	GTGCAG	2 cut(s)	263, 540
Bsh1236I	CGCG	2 cut(s)	702, 870
BshFI	GGCC	3 cut(s)	237, 424, 671
BsiHKAI	GWGCWC	4 cut(s)	95, 205, 1040, 1185
BsiSI	CCGG	1 cut(s)	217
BslI	CCNNNNNNNGG	3 cut(s)	84, 458, 1373
BsmAI	GTCTC	2 cut(s)	701, 780
BsmI	GAATGC	1 cut(s)	1062
BsnI	GGCC	3 cut(s)	237, 424, 671
Bsp1286I	GDGCHC	5 cut(s)	95, 205, 211, 1040, 1185
Bsp1407I	TGTACA	1 cut(s)	1421
Bsp143I	GATC	5 cut(s)	349, 475, 574, 1147, 1591
BspACI	CCGC	2 cut(s)	589, 702
BspANI	GGCC	3 cut(s)	237, 424, 671
BspCNI	CTCAG	2 cut(s)	313, 520
BspFNI	CGCG	2 cut(s)	702, 870
BspHI	TCATGA	3 cut(s)	939, 1021, 1185
BspPI	GGATC	3 cut(s)	357, 483, 569
BspQI	GCTCTTC	1 cut(s)	216
BsrDI	GCAATG	2 cut(s)	819, 1746
BsrGI	TGTACA	1 cut(s)	1421
BsrI	ACTGG	6 cut(s)	306, 488, 715, 1202, 1399, 1406
BssECI	CCNNGG	2 cut(s)	796, 970
BssMI	GATC	5 cut(s)	349, 475, 574, 1147, 1591
BssT1I	CCWWGG	1 cut(s)	796
Bst2UI	CCWGG	2 cut(s)	239, 971
Bst4CI	ACNGT	2 cut(s)	691, 741
Bst6I	CTCTTC	3 cut(s)	216, 513, 983
BstAPI	GCANNNNNTGC	2 cut(s)	830, 924
BstAUI	TGTACA	1 cut(s)	1421
BstBAI	YACGTR	2 cut(s)	1067, 1433
BstDEI	CTNAG	4 cut(s)	68, 321, 528, 1323
BstF5I	GGATG	4 cut(s)	93, 293, 719, 952
BstFNI	CGCG	2 cut(s)	702, 870
BstKTI	GATC	5 cut(s)	352, 478, 577, 1150, 1594
BstMAI	GTCTC	2 cut(s)	701, 780
BstMBI	GATC	5 cut(s)	349, 475, 574, 1147, 1591
BstMWI	GCNNNNNNNGC	3 cut(s)	830, 924, 1126
BstNI	CCWGG	2 cut(s)	239, 971
BstNSI	RCATGY	3 cut(s)	10, 596, 1335
BstSCI	CCNGG	2 cut(s)	237, 969
BstSFI	CTRYAG	1 cut(s)	1143
BstSLI	GKGCMC	1 cut(s)	205
BstSNI	TACGTA	1 cut(s)	1433
BstUI	CGCG	2 cut(s)	702, 870
BstV1I	GCAGC	2 cut(s)	276, 1129
BstV2I	GAAGAC	1 cut(s)	1215
BstX2I	RGATCY	1 cut(s)	574
BstXI	CCANNNNNNTGG	1 cut(s)	1204
BstYI	RGATCY	1 cut(s)	574
BsuI	GTATCC	1 cut(s)	803
BsuRI	GGCC	3 cut(s)	237, 424, 671
BtrI	CACGTC	1 cut(s)	378
BtsCI	GGATG	4 cut(s)	93, 293, 719, 952
BtsIMutI	CAGTG	8 cut(s)	313, 687, 1169, 1209, 1392, 1581, 1601, 1754
CciI	TCATGA	3 cut(s)	939, 1021, 1185
Csp6I	GTAC	5 cut(s)	365, 866, 1123, 1399, 1422
CviQI	GTAC	5 cut(s)	365, 866, 1123, 1399, 1422
DdeI	CTNAG	4 cut(s)	68, 321, 528, 1323
DpnI	GATC	5 cut(s)	351, 477, 576, 1149, 1593
DpnII	GATC	5 cut(s)	349, 475, 574, 1147, 1591
DraI	TTTAAA	1 cut(s)	1279
EaeI	YGGCCR	1 cut(s)	235
Eam1104I	CTCTTC	3 cut(s)	216, 513, 983
EarI	CTCTTC	3 cut(s)	216, 513, 983
Eco105I	TACGTA	1 cut(s)	1433
Eco130I	CCWWGG	1 cut(s)	796
Eco147I	AGGCCT	1 cut(s)	424
Eco24I	GRGCYC	1 cut(s)	211
Eco57I	CTGAAG	2 cut(s)	630, 1193
Eco72I	CACGTG	1 cut(s)	1067
EcoRII	CCWGG	2 cut(s)	237, 969
EcoT14I	CCWWGG	1 cut(s)	796
EcoT38I	GRGCYC	1 cut(s)	211
ErhI	CCWWGG	1 cut(s)	796
FauNDI	CATATG	2 cut(s)	853, 1630
FblI	GTMKAC	2 cut(s)	380, 1284
Fnu4HI	GCNGC	3 cut(s)	265, 590, 1118
FokI	GGATG	4 cut(s)	100, 280, 726, 959
FriOI	GRGCYC	1 cut(s)	211
Fsp4HI	GCNGC	3 cut(s)	265, 590, 1118
FspBI	CTAG	3 cut(s)	468, 840, 1269
GluI	GCNGC	3 cut(s)	265, 590, 1118
GsuI	CTGGAG	2 cut(s)	505, 953
HaeIII	GGCC	3 cut(s)	237, 424, 671
HapII	CCGG	1 cut(s)	217
HindIII	AAGCTT	2 cut(s)	548, 1175
HinfI	GANTC	7 cut(s)	190, 245, 323, 392, 523, 530, 1679
HpaII	CCGG	1 cut(s)	217
HphI	GGTGA	4 cut(s)	887, 986, 1679, 1724
Hpy166II	GTNNAC	7 cut(s)	203, 275, 317, 381, 866, 1285, 1422
Hpy188I	TCNGA	6 cut(s)	63, 328, 391, 570, 1086, 1563
Hpy8I	GTNNAC	7 cut(s)	203, 275, 317, 381, 866, 1285, 1422
Hpy99I	CGWCG	2 cut(s)	819, 1303
HpyAV	CCTTC	5 cut(s)	18, 118, 127, 1481, 1519
HpyCH4III	ACNGT	2 cut(s)	691, 741
HpyCH4IV	ACGT	5 cut(s)	377, 1066, 1099, 1432, 1740
HpyCH4V	TGCA	7 cut(s)	203, 280, 557, 824, 1117, 1721, 1751
HpyF10VI	GCNNNNNNNGC	3 cut(s)	830, 924, 1126
HpyF3I	CTNAG	4 cut(s)	68, 321, 528, 1323
HpySE526I	ACGT	5 cut(s)	377, 1066, 1099, 1432, 1740
Kzo9I	GATC	5 cut(s)	349, 475, 574, 1147, 1591
LguI	GCTCTTC	1 cut(s)	216
LmnI	GCTCC	2 cut(s)	652, 932
Lsp1109I	GCAGC	2 cut(s)	276, 1129
LweI	GCATC	2 cut(s)	1684, 1760
MaeI	CTAG	3 cut(s)	468, 840, 1269
MaeII	ACGT	5 cut(s)	377, 1066, 1099, 1432, 1740
MaeIII	GTNAC	4 cut(s)	536, 802, 1390, 1577
MalI	GATC	5 cut(s)	351, 477, 576, 1149, 1593
MboI	GATC	5 cut(s)	349, 475, 574, 1147, 1591
MboII	GAAGA	7 cut(s)	203, 467, 530, 1000, 1220, 1601, 1617
MflI	RGATCY	1 cut(s)	574
MhlI	GDGCHC	5 cut(s)	95, 205, 211, 1040, 1185
MlsI	TGGCCA	1 cut(s)	237
MluCI	AATT	5 cut(s)	682, 1005, 1274, 1350, 1659
MluI	ACGCGT	1 cut(s)	868
MluNI	TGGCCA	1 cut(s)	237
MlyI	GAGTC	5 cut(s)	254, 332, 386, 532, 539
MmeI	TCCRAC	2 cut(s)	306, 1489
Mox20I	TGGCCA	1 cut(s)	237
MroXI	GAANNNNTTC	2 cut(s)	1060, 1542
MscI	TGGCCA	1 cut(s)	237
MseI	TTAA	3 cut(s)	258, 359, 1278
MslI	CAYNNNNRTG	4 cut(s)	1055, 1202, 1382, 1563
Msp20I	TGGCCA	1 cut(s)	237
MspI	CCGG	1 cut(s)	217
MspR9I	CCNGG	2 cut(s)	239, 971
Mva1269I	GAATGC	1 cut(s)	1062
MvaI	CCWGG	2 cut(s)	239, 971
MvnI	CGCG	2 cut(s)	702, 870
MwoI	GCNNNNNNNGC	3 cut(s)	830, 924, 1126
NdeI	CATATG	2 cut(s)	853, 1630
NdeII	GATC	5 cut(s)	349, 475, 574, 1147, 1591
NmuCI	GTSAC	1 cut(s)	1390
NspI	RCATGY	3 cut(s)	10, 596, 1335
PagI	TCATGA	3 cut(s)	939, 1021, 1185
PceI	AGGCCT	1 cut(s)	424
PciI	ACATGT	1 cut(s)	6
PciSI	GCTCTTC	1 cut(s)	216
PctI	GAATGC	1 cut(s)	1062
PdmI	GAANNNNTTC	2 cut(s)	1060, 1542
PfeI	GAWTC	2 cut(s)	190, 1679
PflMI	CCANNNNNTGG	1 cut(s)	458
PkrI	GCNGC	3 cut(s)	266, 591, 1119
PleI	GAGTC	5 cut(s)	253, 331, 386, 531, 538
PmaCI	CACGTG	1 cut(s)	1067
PmlI	CACGTG	1 cut(s)	1067
PpsI	GAGTC	5 cut(s)	253, 331, 386, 531, 538
Ppu21I	YACGTR	2 cut(s)	1067, 1433
PscI	ACATGT	1 cut(s)	6
PsiI	TTATAA	1 cut(s)	644
Psp6I	CCWGG	2 cut(s)	237, 969
PspCI	CACGTG	1 cut(s)	1067
PspGI	CCWGG	2 cut(s)	237, 969
PsuI	RGATCY	1 cut(s)	574
RsaI	GTAC	5 cut(s)	366, 867, 1124, 1400, 1423
RsaNI	GTAC	5 cut(s)	365, 866, 1123, 1399, 1422
RseI	CAYNNNNRTG	4 cut(s)	1055, 1202, 1382, 1563
SapI	GCTCTTC	1 cut(s)	216
SaqAI	TTAA	3 cut(s)	258, 359, 1278
SatI	GCNGC	3 cut(s)	265, 590, 1118
Sau3AI	GATC	5 cut(s)	349, 475, 574, 1147, 1591
ScaI	AGTACT	1 cut(s)	1124
SchI	GAGTC	5 cut(s)	254, 332, 386, 532, 539
ScrFI	CCNGG	2 cut(s)	239, 971
SduI	GDGCHC	5 cut(s)	95, 205, 211, 1040, 1185
SfaNI	GCATC	2 cut(s)	1684, 1760
SfcI	CTRYAG	1 cut(s)	1143
SmiMI	CAYNNNNRTG	4 cut(s)	1055, 1202, 1382, 1563
SmlI	CTYRAG	2 cut(s)	113, 1033
SmoI	CTYRAG	2 cut(s)	113, 1033
SnaBI	TACGTA	1 cut(s)	1433
Sse9I	AATT	5 cut(s)	682, 1005, 1274, 1350, 1659
SseBI	AGGCCT	1 cut(s)	424
SsiI	CCGC	2 cut(s)	589, 702
SspI	AATATT	1 cut(s)	232
SspMI	CTAG	3 cut(s)	468, 840, 1269
StuI	AGGCCT	1 cut(s)	424
StyD4I	CCNGG	2 cut(s)	237, 969
StyI	CCWWGG	1 cut(s)	796
TaaI	ACNGT	2 cut(s)	691, 741
TaiI	ACGT	5 cut(s)	380, 1069, 1102, 1435, 1743
TaqI	TCGA	2 cut(s)	1011, 1298
TasI	AATT	5 cut(s)	682, 1005, 1274, 1350, 1659
TatI	WGTACW	2 cut(s)	1122, 1421
TauI	GCSGC	1 cut(s)	592
TfiI	GAWTC	2 cut(s)	190, 1679
Tru1I	TTAA	3 cut(s)	258, 359, 1278
Tru9I	TTAA	3 cut(s)	258, 359, 1278
TscAI	CASTG	8 cut(s)	313, 694, 1176, 1209, 1399, 1588, 1601, 1761
TseFI	GTSAC	1 cut(s)	1390
TseI	GCWGC	2 cut(s)	264, 1117
Tsp45I	GTSAC	1 cut(s)	1390
TspGWI	ACGGA	1 cut(s)	959
TspRI	CASTG	8 cut(s)	313, 694, 1176, 1209, 1399, 1588, 1601, 1761
Van91I	CCANNNNNTGG	1 cut(s)	458
VneI	GTGCAC	1 cut(s)	201
XapI	RAATTY	2 cut(s)	682, 1350
XbaI	TCTAGA	1 cut(s)	1268
XceI	RCATGY	3 cut(s)	10, 596, 1335
XmiI	GTMKAC	2 cut(s)	380, 1284
XmnI	GAANNNNTTC	2 cut(s)	1060, 1542
XspI	CTAG	3 cut(s)	468, 840, 1269
ZrmI	AGTACT	1 cut(s)	1124

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.