ATP-dependent DNA helicase Q-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 2 cut(s) | 183, 2516 |
| AccB1I | GGYRCC | 1 cut(s) | 3481 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 712, 3074 |
| AccI | GTMKAC | 1 cut(s) | 2736 |
| AccII | CGCG | 1 cut(s) | 967 |
| AciI | CCGC | 1 cut(s) | 3524 |
| AclWI | GGATC | 7 cut(s) | 604, 1784, 2162, 2175, 2672, 2908, 3117 |
| AcoI | YGGCCR | 1 cut(s) | 3291 |
| AcuI | CTGAAG | 2 cut(s) | 269, 3039 |
| AcvI | CACGTG | 1 cut(s) | 2834 |
| AcyI | GRCGYC | 1 cut(s) | 71 |
| AfaI | GTAC | 5 cut(s) | 37, 722, 2271, 2461, 2596 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 453, 712, 1423, 1478, 3074, 3659 |
| AflIII | ACRYGT | 3 cut(s) | 97, 2612, 2833 |
| AhlI | ACTAGT | 1 cut(s) | 815 |
| AjnI | CCWGG | 8 cut(s) | 313, 347, 452, 589, 1097, 1186, 1522, 3652 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 309, 341, 1266, 1298 |
| Alw21I | GWGCWC | 4 cut(s) | 143, 206, 250, 839 |
| Alw26I | GTCTC | 2 cut(s) | 1021, 2090 |
| Alw44I | GTGCAC | 1 cut(s) | 246 |
| AlwI | GGATC | 7 cut(s) | 604, 1784, 2162, 2175, 2672, 2908, 3117 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 881, 1898 |
| Ama87I | CYCGRG | 2 cut(s) | 582, 1022 |
| AoxI | GGCC | 4 cut(s) | 1100, 1371, 3291, 3510 |
| ApaLI | GTGCAC | 1 cut(s) | 246 |
| AseI | ATTAAT | 2 cut(s) | 438, 1431 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 448 |
| AspLEI | GCGC | 2 cut(s) | 184, 2517 |
| AspS9I | GGNCC | 2 cut(s) | 1356, 2860 |
| AsuHPI | GGTGA | 5 cut(s) | 823, 1690, 2701, 2834, 3442 |
| AsuII | TTCGAA | 1 cut(s) | 3148 |
| AvaI | CYCGRG | 2 cut(s) | 582, 1022 |
| AvaII | GGWCC | 2 cut(s) | 1356, 2860 |
| BaeGI | GKGCMC | 1 cut(s) | 250 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 2443, 2443, 2476, 2476 |
| BalI | TGGCCA | 1 cut(s) | 3293 |
| BamHI | GGATCC | 1 cut(s) | 2167 |
| BanI | GGYRCC | 1 cut(s) | 3481 |
| BanII | GRGCYC | 3 cut(s) | 143, 206, 2747 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 361, 393 |
| BbrPI | CACGTG | 1 cut(s) | 2834 |
| BbsI | GAAGAC | 1 cut(s) | 2969 |
| Bbv12I | GWGCWC | 4 cut(s) | 143, 206, 250, 839 |
| BccI | CCATC | 6 cut(s) | 784, 1232, 2325, 2339, 3170, 3401 |
| BceAI | ACGGC | 3 cut(s) | 58, 210, 1751 |
| BciT130I | CCWGG | 8 cut(s) | 315, 349, 454, 591, 1099, 1188, 1524, 3654 |
| BciVI | GTATCC | 2 cut(s) | 2444, 3303 |
| BcoDI | GTCTC | 2 cut(s) | 1021, 2090 |
| BcuI | ACTAGT | 1 cut(s) | 815 |
| BfaI | CTAG | 9 cut(s) | 329, 342, 816, 1773, 1908, 2024, 2813, 3240, 3560 |
| BfmI | CTRYAG | 6 cut(s) | 780, 2232, 2561, 2737, 3215, 3514 |
| BfuI | GTATCC | 2 cut(s) | 2444, 3303 |
| BlpI | GCTNAGC | 1 cut(s) | 2175 |
| Bme1390I | CCNGG | 8 cut(s) | 315, 349, 454, 591, 1099, 1188, 1524, 3654 |
| Bme18I | GGWCC | 2 cut(s) | 1356, 2860 |
| BmeT110I | CYCGRG | 2 cut(s) | 582, 1022 |
| BmgT120I | GGNCC | 2 cut(s) | 1356, 2860 |
| BmiI | GGNNCC | 8 cut(s) | 55, 445, 588, 1275, 2169, 2746, 3483, 3528 |
| BmrFI | CCNGG | 8 cut(s) | 315, 349, 454, 591, 1099, 1188, 1524, 3654 |
| BmsI | GCATC | 5 cut(s) | 328, 566, 1091, 2453, 2785 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1066 |
| BpiI | GAAGAC | 1 cut(s) | 2969 |
| BpmI | CTGGAG | 4 cut(s) | 810, 1388, 1497, 1860 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2175 |
| Bpu14I | TTCGAA | 1 cut(s) | 3148 |
| BpuEI | CTTGAG | 4 cut(s) | 106, 707, 1107, 2074 |
| Bsa29I | ATCGAT | 2 cut(s) | 666, 2034 |
| BsaAI | YACGTR | 1 cut(s) | 2834 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2905 |
| BsaHI | GRCGYC | 1 cut(s) | 71 |
| BsaJI | CCNNGG | 7 cut(s) | 1097, 1352, 2155, 2416, 2817, 2856, 3246 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1078, 1108, 2729, 2759 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 453, 712, 1423, 1478, 3074, 3659 |
| Bse1I | ACTGG | 5 cut(s) | 1480, 1877, 2682, 2691, 3369 |
| Bse3DI | GCAATG | 2 cut(s) | 795, 3382 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2905 |
| BseBI | CCWGG | 8 cut(s) | 315, 349, 454, 591, 1099, 1188, 1524, 3654 |
| BseCI | ATCGAT | 2 cut(s) | 666, 2034 |
| BseDI | CCNNGG | 7 cut(s) | 1097, 1352, 2155, 2416, 2817, 2856, 3246 |
| BseGI | GGATG | 7 cut(s) | 343, 1057, 1082, 1243, 1281, 1927, 2659 |
| BseJI | GATNNNNATC | 1 cut(s) | 2905 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 453, 712, 1423, 1478, 3074, 3659 |
| BseMI | GCAATG | 2 cut(s) | 795, 3382 |
| BseMII | CTCAG | 4 cut(s) | 970, 2106, 2189, 2862 |
| BseNI | ACTGG | 5 cut(s) | 1480, 1877, 2682, 2691, 3369 |
| BseSI | GKGCMC | 1 cut(s) | 250 |
| BsgI | GTGCAG | 1 cut(s) | 718 |
| Bsh1236I | CGCG | 1 cut(s) | 967 |
| BshFI | GGCC | 4 cut(s) | 1102, 1373, 3293, 3512 |
| BshNI | GGYRCC | 1 cut(s) | 3481 |
| BshVI | ATCGAT | 2 cut(s) | 666, 2034 |
| BsiHKAI | GWGCWC | 4 cut(s) | 143, 206, 250, 839 |
| BsiHKCI | CYCGRG | 2 cut(s) | 582, 1022 |
| BsiSI | CCGG | 1 cut(s) | 1963 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 453, 712, 1423, 1478, 3074, 3659 |
| BsmAI | GTCTC | 2 cut(s) | 1021, 2090 |
| BsmI | GAATGC | 4 cut(s) | 846, 1133, 3595, 3622 |
| BsnI | GGCC | 4 cut(s) | 1102, 1373, 3293, 3512 |
| BsoBI | CYCGRG | 2 cut(s) | 582, 1022 |
| Bsp119I | TTCGAA | 1 cut(s) | 3148 |
| Bsp1286I | GDGCHC | 5 cut(s) | 143, 206, 250, 839, 2747 |
| Bsp1407I | TGTACA | 1 cut(s) | 2594 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2175 |
| Bsp19I | CCATGG | 2 cut(s) | 1352, 2155 |
| BspACI | CCGC | 1 cut(s) | 3524 |
| BspANI | GGCC | 4 cut(s) | 1102, 1373, 3293, 3512 |
| BspCNI | CTCAG | 4 cut(s) | 969, 2107, 2188, 2863 |
| BspDI | ATCGAT | 2 cut(s) | 666, 2034 |
| BspFNI | CGCG | 1 cut(s) | 967 |
| BspHI | TCATGA | 1 cut(s) | 2059 |
| BspLI | GGNNCC | 8 cut(s) | 55, 445, 588, 1275, 2169, 2746, 3483, 3528 |
| BspMAI | CTGCAG | 1 cut(s) | 3219 |
| BspPI | GGATC | 7 cut(s) | 604, 1784, 2162, 2175, 2672, 2908, 3117 |
| BspT104I | TTCGAA | 1 cut(s) | 3148 |
| BspT107I | GGYRCC | 1 cut(s) | 3481 |
| BsrDI | GCAATG | 2 cut(s) | 795, 3382 |
| BsrGI | TGTACA | 1 cut(s) | 2594 |
| BsrI | ACTGG | 5 cut(s) | 1480, 1877, 2682, 2691, 3369 |
| BssECI | CCNNGG | 7 cut(s) | 1097, 1352, 2155, 2416, 2817, 2856, 3246 |
| BssNI | GRCGYC | 1 cut(s) | 71 |
| BssT1I | CCWWGG | 5 cut(s) | 1352, 2155, 2416, 2817, 3246 |
| Bst2UI | CCWGG | 8 cut(s) | 315, 349, 454, 591, 1099, 1188, 1524, 3654 |
| Bst6I | CTCTTC | 3 cut(s) | 1234, 3389, 3622 |
| BstACI | GRCGYC | 1 cut(s) | 71 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1585 |
| BstAUI | TGTACA | 1 cut(s) | 2594 |
| BstBAI | YACGTR | 1 cut(s) | 2834 |
| BstBI | TTCGAA | 1 cut(s) | 3148 |
| BstC8I | GCNNGC | 6 cut(s) | 270, 1590, 1770, 1932, 2181, 2792 |
| BstDEI | CTNAG | 6 cut(s) | 956, 1613, 2013, 2115, 2175, 2871 |
| BstDSI | CCRYGG | 2 cut(s) | 1352, 2155 |
| BstF5I | GGATG | 7 cut(s) | 343, 1057, 1082, 1243, 1281, 1927, 2659 |
| BstFNI | CGCG | 1 cut(s) | 967 |
| BstHHI | GCGC | 2 cut(s) | 184, 2517 |
| BstMAI | GTCTC | 2 cut(s) | 1021, 2090 |
| BstNI | CCWGG | 8 cut(s) | 315, 349, 454, 591, 1099, 1188, 1524, 3654 |
| BstNSI | RCATGY | 3 cut(s) | 101, 272, 2616 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1066 |
| BstSCI | CCNGG | 8 cut(s) | 313, 347, 452, 589, 1097, 1186, 1522, 3652 |
| BstSFI | CTRYAG | 6 cut(s) | 780, 2232, 2561, 2737, 3215, 3514 |
| BstSLI | GKGCMC | 1 cut(s) | 250 |
| BstUI | CGCG | 1 cut(s) | 967 |
| BstV2I | GAAGAC | 1 cut(s) | 2969 |
| BstX2I | RGATCY | 3 cut(s) | 2167, 2900, 3109 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1366, 1989 |
| BstYI | RGATCY | 3 cut(s) | 2167, 2900, 3109 |
| Bsu15I | ATCGAT | 2 cut(s) | 666, 2034 |
| BsuI | GTATCC | 2 cut(s) | 2444, 3303 |
| BsuRI | GGCC | 4 cut(s) | 1102, 1373, 3293, 3512 |
| BsuTUI | ATCGAT | 2 cut(s) | 666, 2034 |
| BtgI | CCRYGG | 2 cut(s) | 1352, 2155 |
| BtsCI | GGATG | 7 cut(s) | 343, 1057, 1082, 1243, 1281, 1927, 2659 |
| BtsI | GCAGTG | 1 cut(s) | 2204 |
| BtsIMutI | CAGTG | 8 cut(s) | 466, 1814, 1884, 2204, 2241, 2389, 3041, 3078 |
| Cac8I | GCNNGC | 6 cut(s) | 270, 1590, 1770, 1932, 2181, 2792 |
| CaiI | CAGNNNCTG | 2 cut(s) | 881, 1898 |
| CciI | TCATGA | 1 cut(s) | 2059 |
| CfoI | GCGC | 2 cut(s) | 184, 2517 |
| Cfr13I | GGNCC | 2 cut(s) | 1356, 2860 |
| ClaI | ATCGAT | 2 cut(s) | 666, 2034 |
| CseI | GACGC | 1 cut(s) | 79 |
| Csp6I | GTAC | 5 cut(s) | 36, 721, 2270, 2460, 2595 |
| CviQI | GTAC | 5 cut(s) | 36, 721, 2270, 2460, 2595 |
| DdeI | CTNAG | 6 cut(s) | 956, 1613, 2013, 2115, 2175, 2871 |
| DraI | TTTAAA | 2 cut(s) | 79, 1752 |
| EaeI | YGGCCR | 1 cut(s) | 3291 |
| Eam1104I | CTCTTC | 3 cut(s) | 1234, 3389, 3622 |
| EarI | CTCTTC | 3 cut(s) | 1234, 3389, 3622 |
| Ecl136II | GAGCTC | 2 cut(s) | 141, 204 |
| Eco130I | CCWWGG | 5 cut(s) | 1352, 2155, 2416, 2817, 3246 |
| Eco147I | AGGCCT | 2 cut(s) | 1102, 3512 |
| Eco24I | GRGCYC | 3 cut(s) | 143, 206, 2747 |
| Eco47I | GGWCC | 2 cut(s) | 1356, 2860 |
| Eco53kI | GAGCTC | 2 cut(s) | 141, 204 |
| Eco57I | CTGAAG | 2 cut(s) | 269, 3039 |
| Eco72I | CACGTG | 1 cut(s) | 2834 |
| Eco88I | CYCGRG | 2 cut(s) | 582, 1022 |
| EcoICRI | GAGCTC | 2 cut(s) | 141, 204 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2860 |
| EcoRI | GAATTC | 3 cut(s) | 219, 2556, 3234 |
| EcoRII | CCWGG | 8 cut(s) | 313, 347, 452, 589, 1097, 1186, 1522, 3652 |
| EcoT14I | CCWWGG | 5 cut(s) | 1352, 2155, 2416, 2817, 3246 |
| EcoT22I | ATGCAT | 2 cut(s) | 6, 1581 |
| EcoT38I | GRGCYC | 3 cut(s) | 143, 206, 2747 |
| ErhI | CCWWGG | 5 cut(s) | 1352, 2155, 2416, 2817, 3246 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2968, 3000 |
| FauNDI | CATATG | 3 cut(s) | 21, 417, 2406 |
| FblI | GTMKAC | 1 cut(s) | 2736 |
| FokI | GGATG | 7 cut(s) | 350, 1064, 1069, 1250, 1268, 1934, 2666 |
| FriOI | GRGCYC | 3 cut(s) | 143, 206, 2747 |
| FspBI | CTAG | 9 cut(s) | 329, 342, 816, 1773, 1908, 2024, 2813, 3240, 3560 |
| FspI | TGCGCA | 2 cut(s) | 183, 2516 |
| GlaI | GCGC | 2 cut(s) | 183, 2516 |
| GsuI | CTGGAG | 4 cut(s) | 810, 1388, 1497, 1860 |
| HaeIII | GGCC | 4 cut(s) | 1102, 1373, 3293, 3512 |
| HapII | CCGG | 1 cut(s) | 1963 |
| HgaI | GACGC | 1 cut(s) | 79 |
| HhaI | GCGC | 2 cut(s) | 184, 2517 |
| Hin1I | GRCGYC | 1 cut(s) | 71 |
| Hin6I | GCGC | 2 cut(s) | 182, 2515 |
| HinP1I | GCGC | 2 cut(s) | 182, 2515 |
| HincII | GTYRAC | 6 cut(s) | 568, 703, 1303, 1948, 2697, 3648 |
| HindII | GTYRAC | 6 cut(s) | 568, 703, 1303, 1948, 2697, 3648 |
| HindIII | AAGCTT | 4 cut(s) | 758, 977, 2826, 2997 |
| HinfI | GANTC | 9 cut(s) | 14, 406, 578, 1012, 1160, 1804, 2979, 3061, 3167 |
| HpaI | GTTAAC | 3 cut(s) | 1303, 1948, 2697 |
| HpaII | CCGG | 1 cut(s) | 1963 |
| HphI | GGTGA | 5 cut(s) | 823, 1690, 2701, 2834, 3442 |
| Hpy99I | CGWCG | 2 cut(s) | 499, 2556 |
| HpyAV | CCTTC | 6 cut(s) | 898, 1307, 2303, 2644, 2873, 2994 |
| HpyCH4IV | ACGT | 3 cut(s) | 2600, 2833, 2842 |
| HpyF3I | CTNAG | 6 cut(s) | 956, 1613, 2013, 2115, 2175, 2871 |
| HpySE526I | ACGT | 3 cut(s) | 2600, 2833, 2842 |
| Hsp92I | GRCGYC | 1 cut(s) | 71 |
| HspAI | GCGC | 2 cut(s) | 182, 2515 |
| KspAI | GTTAAC | 3 cut(s) | 1303, 1948, 2697 |
| LmnI | GCTCC | 3 cut(s) | 1509, 2750, 3526 |
| LweI | GCATC | 5 cut(s) | 328, 566, 1091, 2453, 2785 |
| MaeI | CTAG | 9 cut(s) | 329, 342, 816, 1773, 1908, 2024, 2813, 3240, 3560 |
| MaeII | ACGT | 3 cut(s) | 2600, 2833, 2842 |
| MfeI | CAATTG | 2 cut(s) | 3321, 3542 |
| MflI | RGATCY | 3 cut(s) | 2167, 2900, 3109 |
| MhlI | GDGCHC | 5 cut(s) | 143, 206, 250, 839, 2747 |
| MlsI | TGGCCA | 1 cut(s) | 3293 |
| MluNI | TGGCCA | 1 cut(s) | 3293 |
| MlyI | GAGTC | 3 cut(s) | 415, 1813, 3070 |
| MmeI | TCCRAC | 5 cut(s) | 72, 81, 346, 986, 1722 |
| Mox20I | TGGCCA | 1 cut(s) | 3293 |
| Mph1103I | ATGCAT | 2 cut(s) | 6, 1581 |
| MroXI | GAANNNNTTC | 1 cut(s) | 448 |
| MscI | TGGCCA | 1 cut(s) | 3293 |
| MslI | CAYNNNNRTG | 2 cut(s) | 416, 2061 |
| Msp20I | TGGCCA | 1 cut(s) | 3293 |
| MspA1I | CMGCKG | 1 cut(s) | 1130 |
| MspI | CCGG | 1 cut(s) | 1963 |
| MspR9I | CCNGG | 8 cut(s) | 315, 349, 454, 591, 1099, 1188, 1524, 3654 |
| MunI | CAATTG | 2 cut(s) | 3321, 3542 |
| Mva1269I | GAATGC | 4 cut(s) | 846, 1133, 3595, 3622 |
| MvaI | CCWGG | 8 cut(s) | 315, 349, 454, 591, 1099, 1188, 1524, 3654 |
| MvnI | CGCG | 1 cut(s) | 967 |
| NcoI | CCATGG | 2 cut(s) | 1352, 2155 |
| NdeI | CATATG | 3 cut(s) | 21, 417, 2406 |
| NlaIV | GGNNCC | 8 cut(s) | 55, 445, 588, 1275, 2169, 2746, 3483, 3528 |
| NmuCI | GTSAC | 8 cut(s) | 392, 407, 811, 1068, 1554, 1696, 2384, 2656 |
| NsbI | TGCGCA | 2 cut(s) | 183, 2516 |
| NsiI | ATGCAT | 2 cut(s) | 6, 1581 |
| NspI | RCATGY | 3 cut(s) | 101, 272, 2616 |
| NspV | TTCGAA | 1 cut(s) | 3148 |
| PaeI | GCATGC | 1 cut(s) | 272 |
| PaeR7I | CTCGAG | 1 cut(s) | 1022 |
| PagI | TCATGA | 1 cut(s) | 2059 |
| PceI | AGGCCT | 2 cut(s) | 1102, 3512 |
| PciI | ACATGT | 2 cut(s) | 97, 2612 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2839 |
| PctI | GAATGC | 4 cut(s) | 846, 1133, 3595, 3622 |
| PdmI | GAANNNNTTC | 1 cut(s) | 448 |
| PfeI | GAWTC | 6 cut(s) | 14, 578, 1012, 1160, 2979, 3167 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 712, 3074 |
| PfoI | TCCNGGA | 4 cut(s) | 452, 589, 1186, 1522 |
| PleI | GAGTC | 3 cut(s) | 414, 1812, 3069 |
| PmaCI | CACGTG | 1 cut(s) | 2834 |
| PmlI | CACGTG | 1 cut(s) | 2834 |
| PpsI | GAGTC | 3 cut(s) | 414, 1812, 3069 |
| Ppu21I | YACGTR | 1 cut(s) | 2834 |
| PpuMI | RGGWCCY | 1 cut(s) | 2860 |
| PscI | ACATGT | 2 cut(s) | 97, 2612 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1066 |
| PshBI | ATTAAT | 2 cut(s) | 438, 1431 |
| Psp124BI | GAGCTC | 2 cut(s) | 143, 206 |
| Psp5II | RGGWCCY | 1 cut(s) | 2860 |
| Psp6I | CCWGG | 8 cut(s) | 313, 347, 452, 589, 1097, 1186, 1522, 3652 |
| PspCI | CACGTG | 1 cut(s) | 2834 |
| PspGI | CCWGG | 8 cut(s) | 313, 347, 452, 589, 1097, 1186, 1522, 3652 |
| PspN4I | GGNNCC | 8 cut(s) | 55, 445, 588, 1275, 2169, 2746, 3483, 3528 |
| PspPI | GGNCC | 2 cut(s) | 1356, 2860 |
| PspPPI | RGGWCCY | 1 cut(s) | 2860 |
| PstI | CTGCAG | 1 cut(s) | 3219 |
| PstNI | CAGNNNCTG | 2 cut(s) | 881, 1898 |
| PsuI | RGATCY | 3 cut(s) | 2167, 2900, 3109 |
| PvuII | CAGCTG | 1 cut(s) | 1130 |
| RsaI | GTAC | 5 cut(s) | 37, 722, 2271, 2461, 2596 |
| RsaNI | GTAC | 5 cut(s) | 36, 721, 2270, 2460, 2595 |
| RseI | CAYNNNNRTG | 2 cut(s) | 416, 2061 |
| SacI | GAGCTC | 2 cut(s) | 143, 206 |
| Sau96I | GGNCC | 2 cut(s) | 1356, 2860 |
| SchI | GAGTC | 3 cut(s) | 415, 1813, 3070 |
| ScrFI | CCNGG | 8 cut(s) | 315, 349, 454, 591, 1099, 1188, 1524, 3654 |
| SduI | GDGCHC | 5 cut(s) | 143, 206, 250, 839, 2747 |
| SfaNI | GCATC | 5 cut(s) | 328, 566, 1091, 2453, 2785 |
| SfcI | CTRYAG | 6 cut(s) | 780, 2232, 2561, 2737, 3215, 3514 |
| Sfr274I | CTCGAG | 1 cut(s) | 1022 |
| SfuI | TTCGAA | 1 cut(s) | 3148 |
| SinI | GGWCC | 2 cut(s) | 1356, 2860 |
| SlaI | CTCGAG | 1 cut(s) | 1022 |
| SmiI | ATTTAAAT | 1 cut(s) | 1752 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 416, 2061 |
| SmlI | CTYRAG | 5 cut(s) | 121, 686, 1022, 1122, 2089 |
| SmoI | CTYRAG | 5 cut(s) | 121, 686, 1022, 1122, 2089 |
| SpeI | ACTAGT | 1 cut(s) | 815 |
| SphI | GCATGC | 1 cut(s) | 272 |
| SseBI | AGGCCT | 2 cut(s) | 1102, 3512 |
| SsiI | CCGC | 1 cut(s) | 3524 |
| SspI | AATATT | 4 cut(s) | 229, 694, 1673, 3126 |
| SspMI | CTAG | 9 cut(s) | 329, 342, 816, 1773, 1908, 2024, 2813, 3240, 3560 |
| SstI | GAGCTC | 2 cut(s) | 143, 206 |
| StuI | AGGCCT | 2 cut(s) | 1102, 3512 |
| StyD4I | CCNGG | 8 cut(s) | 313, 347, 452, 589, 1097, 1186, 1522, 3652 |
| StyI | CCWWGG | 5 cut(s) | 1352, 2155, 2416, 2817, 3246 |
| SwaI | ATTTAAAT | 1 cut(s) | 1752 |
| TaiI | ACGT | 3 cut(s) | 2603, 2836, 2845 |
| TaqII | GACCGA | 1 cut(s) | 3456 |
| TatI | WGTACW | 1 cut(s) | 2594 |
| TfiI | GAWTC | 6 cut(s) | 14, 578, 1012, 1160, 2979, 3167 |
| TscAI | CASTG | 8 cut(s) | 466, 1814, 1884, 2204, 2241, 2389, 3048, 3085 |
| TseFI | GTSAC | 8 cut(s) | 392, 407, 811, 1068, 1554, 1696, 2384, 2656 |
| Tsp45I | GTSAC | 8 cut(s) | 392, 407, 811, 1068, 1554, 1696, 2384, 2656 |
| TspGWI | ACGGA | 3 cut(s) | 483, 1078, 2980 |
| TspRI | CASTG | 8 cut(s) | 466, 1814, 1884, 2204, 2241, 2389, 3048, 3085 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 712, 3074 |
| VneI | GTGCAC | 1 cut(s) | 246 |
| VpaK11BI | GGWCC | 2 cut(s) | 1356, 2860 |
| VspI | ATTAAT | 2 cut(s) | 438, 1431 |
| XbaI | TCTAGA | 1 cut(s) | 2023 |
| XceI | RCATGY | 3 cut(s) | 101, 272, 2616 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2324, 3103 |
| XhoI | CTCGAG | 1 cut(s) | 1022 |
| XmiI | GTMKAC | 1 cut(s) | 2736 |
| XmnI | GAANNNNTTC | 1 cut(s) | 448 |
| XspI | CTAG | 9 cut(s) | 329, 342, 816, 1773, 1908, 2024, 2813, 3240, 3560 |
| Zsp2I | ATGCAT | 2 cut(s) | 6, 1581 |