ATP-dependent DNA helicase Q-like
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2418 |
| Acc16I | TGCGCA | 2 cut(s) | 467, 1358 |
| Acc36I | ACCTGC | 1 cut(s) | 1451 |
| AccB1I | GGYRCC | 1 cut(s) | 1919 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1916, 2389 |
| AccI | GTMKAC | 1 cut(s) | 2489 |
| AciI | CCGC | 2 cut(s) | 1541, 2480 |
| AclWI | GGATC | 4 cut(s) | 199, 1004, 1017, 1750 |
| AcoI | YGGCCR | 3 cut(s) | 397, 1189, 1798 |
| AcsI | RAATTY | 2 cut(s) | 556, 1427 |
| AcuI | CTGAAG | 3 cut(s) | 254, 1881, 2421 |
| AfaI | GTAC | 2 cut(s) | 31, 1580 |
| AfeI | AGCGCT | 1 cut(s) | 331 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1916, 2389 |
| AflII | CTTAAG | 1 cut(s) | 1591 |
| AflIII | ACRYGT | 1 cut(s) | 2272 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1629 |
| AjnI | CCWGG | 3 cut(s) | 298, 437, 2100 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 294, 326 |
| Alw21I | GWGCWC | 3 cut(s) | 235, 1956, 2072 |
| Alw26I | GTCTC | 1 cut(s) | 2241 |
| Alw44I | GTGCAC | 1 cut(s) | 231 |
| AlwI | GGATC | 4 cut(s) | 199, 1004, 1017, 1750 |
| Aor51HI | AGCGCT | 1 cut(s) | 331 |
| AoxI | GGCC | 5 cut(s) | 195, 397, 1189, 1798, 2321 |
| ApaLI | GTGCAC | 1 cut(s) | 231 |
| ApeKI | GCWGC | 7 cut(s) | 50, 53, 452, 986, 1310, 1546, 2208 |
| ApoI | RAATTY | 2 cut(s) | 556, 1427 |
| AseI | ATTAAT | 1 cut(s) | 384 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 704 |
| AspLEI | GCGC | 4 cut(s) | 332, 468, 1116, 1359 |
| AsuC2I | CCSGG | 1 cut(s) | 1290 |
| AsuHPI | GGTGA | 6 cut(s) | 652, 671, 1375, 1543, 2143, 2284 |
| AsuII | TTCGAA | 2 cut(s) | 629, 1990 |
| AsuNHI | GCTAGC | 1 cut(s) | 326 |
| BaeGI | GKGCMC | 1 cut(s) | 235 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 705, 738 |
| BalI | TGGCCA | 2 cut(s) | 399, 1191 |
| BamHI | GGATCC | 1 cut(s) | 1009 |
| BanI | GGYRCC | 1 cut(s) | 1919 |
| BanII | GRGCYC | 4 cut(s) | 1589, 1956, 2072, 2373 |
| BbsI | GAAGAC | 3 cut(s) | 509, 1811, 2358 |
| Bbv12I | GWGCWC | 3 cut(s) | 235, 1956, 2072 |
| BbvI | GCAGC | 7 cut(s) | 37, 40, 439, 998, 1322, 1558, 2220 |
| BccI | CCATC | 5 cut(s) | 643, 1181, 1695, 2171, 2183 |
| BceAI | ACGGC | 2 cut(s) | 1412, 2308 |
| BciT130I | CCWGG | 3 cut(s) | 300, 439, 2102 |
| BciVI | GTATCC | 1 cut(s) | 2145 |
| BclI | TGATCA | 1 cut(s) | 2305 |
| BcnI | CCSGG | 1 cut(s) | 1290 |
| BcoDI | GTCTC | 1 cut(s) | 2241 |
| BfaI | CTAG | 5 cut(s) | 186, 282, 327, 750, 2402 |
| BfmI | CTRYAG | 6 cut(s) | 360, 453, 738, 1074, 1403, 2356 |
| BfoI | RGCGCY | 1 cut(s) | 333 |
| BfrI | CTTAAG | 1 cut(s) | 1591 |
| BfuAI | ACCTGC | 1 cut(s) | 1451 |
| BfuI | GTATCC | 1 cut(s) | 2145 |
| BglII | AGATCT | 1 cut(s) | 273 |
| BisI | GCNGC | 7 cut(s) | 51, 54, 453, 987, 1311, 1547, 2209 |
| BlsI | GCNGC | 7 cut(s) | 52, 55, 454, 988, 1312, 1548, 2210 |
| Bme1390I | CCNGG | 4 cut(s) | 300, 439, 1290, 2102 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1629 |
| BmiI | GGNNCC | 4 cut(s) | 1011, 1588, 1921, 2370 |
| BmrFI | CCNGG | 4 cut(s) | 300, 439, 1290, 2102 |
| BmsI | GCATC | 5 cut(s) | 493, 551, 643, 1208, 1627 |
| BmtI | GCTAGC | 1 cut(s) | 330 |
| BpiI | GAAGAC | 3 cut(s) | 509, 1811, 2358 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1262, 1294 |
| BpmI | CTGGAG | 2 cut(s) | 702, 2387 |
| Bpu14I | TTCGAA | 2 cut(s) | 629, 1990 |
| BpuEI | CTTGAG | 1 cut(s) | 698 |
| BpuMI | CCSGG | 1 cut(s) | 1290 |
| Bsa29I | ATCGAT | 1 cut(s) | 423 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1747, 2397 |
| BsaJI | CCNNGG | 2 cut(s) | 1258, 1659 |
| BsaWI | WCCGGW | 1 cut(s) | 1922 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1571, 1601 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1916, 2389 |
| Bse1I | ACTGG | 3 cut(s) | 719, 1335, 1533 |
| Bse3DI | GCAATG | 4 cut(s) | 49, 439, 2224, 2489 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1747, 2397 |
| BseBI | CCWGG | 3 cut(s) | 300, 439, 2102 |
| BseCI | ATCGAT | 1 cut(s) | 423 |
| BseDI | CCNNGG | 2 cut(s) | 1258, 1659 |
| BseGI | GGATG | 4 cut(s) | 658, 1501, 2287, 2398 |
| BseJI | GATNNNNATC | 2 cut(s) | 1747, 2397 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1916, 2389 |
| BseMI | GCAATG | 4 cut(s) | 49, 439, 2224, 2489 |
| BseMII | CTCAG | 6 cut(s) | 148, 324, 581, 1335, 1884, 1946 |
| BseNI | ACTGG | 3 cut(s) | 719, 1335, 1533 |
| BseRI | GAGGAG | 1 cut(s) | 24 |
| BseSI | GKGCMC | 1 cut(s) | 235 |
| BseXI | GCAGC | 7 cut(s) | 37, 40, 439, 998, 1322, 1558, 2220 |
| BshFI | GGCC | 5 cut(s) | 197, 399, 1191, 1800, 2323 |
| BshNI | GGYRCC | 1 cut(s) | 1919 |
| BshVI | ATCGAT | 1 cut(s) | 423 |
| BsiHKAI | GWGCWC | 3 cut(s) | 235, 1956, 2072 |
| BsiSI | CCGG | 3 cut(s) | 1290, 1801, 1923 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1916, 2389 |
| BsmAI | GTCTC | 1 cut(s) | 2241 |
| BsmBI | CGTCTC | 1 cut(s) | 2241 |
| BsmI | GAATGC | 2 cut(s) | 1312, 2437 |
| BsnI | GGCC | 5 cut(s) | 197, 399, 1191, 1800, 2323 |
| Bsp119I | TTCGAA | 2 cut(s) | 629, 1990 |
| Bsp1286I | GDGCHC | 5 cut(s) | 235, 1589, 1956, 2072, 2373 |
| Bsp1407I | TGTACA | 1 cut(s) | 1578 |
| BspACI | CCGC | 2 cut(s) | 1541, 2480 |
| BspANI | GGCC | 5 cut(s) | 197, 399, 1191, 1800, 2323 |
| BspCNI | CTCAG | 6 cut(s) | 147, 325, 580, 1336, 1885, 1945 |
| BspDI | ATCGAT | 1 cut(s) | 423 |
| BspHI | TCATGA | 1 cut(s) | 343 |
| BspLI | GGNNCC | 4 cut(s) | 1011, 1588, 1921, 2370 |
| BspMAI | CTGCAG | 1 cut(s) | 457 |
| BspMI | ACCTGC | 1 cut(s) | 1451 |
| BspOI | GCTAGC | 1 cut(s) | 330 |
| BspPI | GGATC | 4 cut(s) | 199, 1004, 1017, 1750 |
| BspT104I | TTCGAA | 2 cut(s) | 629, 1990 |
| BspT107I | GGYRCC | 1 cut(s) | 1919 |
| BspTI | CTTAAG | 1 cut(s) | 1591 |
| BsrDI | GCAATG | 4 cut(s) | 49, 439, 2224, 2489 |
| BsrGI | TGTACA | 1 cut(s) | 1578 |
| BsrI | ACTGG | 3 cut(s) | 719, 1335, 1533 |
| BssECI | CCNNGG | 2 cut(s) | 1258, 1659 |
| BssT1I | CCWWGG | 2 cut(s) | 1258, 1659 |
| Bst2UI | CCWGG | 3 cut(s) | 300, 439, 2102 |
| Bst6I | CTCTTC | 2 cut(s) | 283, 2464 |
| BstAFI | CTTAAG | 1 cut(s) | 1591 |
| BstAUI | TGTACA | 1 cut(s) | 1578 |
| BstBI | TTCGAA | 2 cut(s) | 629, 1990 |
| BstC8I | GCNNGC | 6 cut(s) | 255, 328, 408, 457, 774, 1783 |
| BstDEI | CTNAG | 8 cut(s) | 134, 333, 567, 1344, 1845, 1893, 1932, 2088 |
| BstF5I | GGATG | 4 cut(s) | 658, 1501, 2287, 2398 |
| BstH2I | RGCGCY | 1 cut(s) | 333 |
| BstHHI | GCGC | 4 cut(s) | 332, 468, 1116, 1359 |
| BstMAI | GTCTC | 1 cut(s) | 2241 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 254, 465, 734, 1022, 1079, 1111, 1405, 1593, 2214 |
| BstNI | CCWGG | 3 cut(s) | 300, 439, 2102 |
| BstNSI | RCATGY | 4 cut(s) | 215, 257, 1785, 2276 |
| BstSCI | CCNGG | 4 cut(s) | 298, 437, 1288, 2100 |
| BstSFI | CTRYAG | 6 cut(s) | 360, 453, 738, 1074, 1403, 2356 |
| BstSLI | GKGCMC | 1 cut(s) | 235 |
| BstV1I | GCAGC | 7 cut(s) | 37, 40, 439, 998, 1322, 1558, 2220 |
| BstV2I | GAAGAC | 3 cut(s) | 509, 1811, 2358 |
| BstX2I | RGATCY | 3 cut(s) | 273, 1009, 1742 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 831, 2042 |
| BstYI | RGATCY | 3 cut(s) | 273, 1009, 1742 |
| Bsu15I | ATCGAT | 1 cut(s) | 423 |
| BsuI | GTATCC | 1 cut(s) | 2145 |
| BsuRI | GGCC | 5 cut(s) | 197, 399, 1191, 1800, 2323 |
| BsuTUI | ATCGAT | 1 cut(s) | 423 |
| BtgZI | GCGATG | 1 cut(s) | 528 |
| BtsCI | GGATG | 4 cut(s) | 658, 1501, 2287, 2398 |
| BtsI | GCAGTG | 4 cut(s) | 475, 1046, 1556, 1856 |
| BtsIMutI | CAGTG | 8 cut(s) | 475, 726, 1046, 1083, 1231, 1556, 1856, 2301 |
| BveI | ACCTGC | 1 cut(s) | 1451 |
| Cac8I | GCNNGC | 6 cut(s) | 255, 328, 408, 457, 774, 1783 |
| CciI | TCATGA | 1 cut(s) | 343 |
| CfoI | GCGC | 4 cut(s) | 332, 468, 1116, 1359 |
| ClaI | ATCGAT | 1 cut(s) | 423 |
| Csp6I | GTAC | 2 cut(s) | 30, 1579 |
| CviQI | GTAC | 2 cut(s) | 30, 1579 |
| DdeI | CTNAG | 8 cut(s) | 134, 333, 567, 1344, 1845, 1893, 1932, 2088 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1629 |
| EaeI | YGGCCR | 3 cut(s) | 397, 1189, 1798 |
| Eam1104I | CTCTTC | 2 cut(s) | 283, 2464 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1629 |
| EarI | CTCTTC | 2 cut(s) | 283, 2464 |
| Ecl136II | GAGCTC | 2 cut(s) | 1954, 2070 |
| Eco130I | CCWWGG | 2 cut(s) | 1258, 1659 |
| Eco24I | GRGCYC | 4 cut(s) | 1589, 1956, 2072, 2373 |
| Eco47III | AGCGCT | 1 cut(s) | 331 |
| Eco53kI | GAGCTC | 2 cut(s) | 1954, 2070 |
| Eco57I | CTGAAG | 3 cut(s) | 254, 1881, 2421 |
| EcoICRI | GAGCTC | 2 cut(s) | 1954, 2070 |
| EcoRI | GAATTC | 1 cut(s) | 556 |
| EcoRII | CCWGG | 3 cut(s) | 298, 437, 2100 |
| EcoT14I | CCWWGG | 2 cut(s) | 1258, 1659 |
| EcoT22I | ATGCAT | 1 cut(s) | 866 |
| EcoT38I | GRGCYC | 4 cut(s) | 1589, 1956, 2072, 2373 |
| ErhI | CCWWGG | 2 cut(s) | 1258, 1659 |
| Esp3I | CGTCTC | 1 cut(s) | 2241 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1810, 1842 |
| FauI | CCCGC | 1 cut(s) | 1534 |
| FauNDI | CATATG | 2 cut(s) | 402, 1248 |
| FbaI | TGATCA | 1 cut(s) | 2305 |
| FblI | GTMKAC | 1 cut(s) | 2489 |
| Fnu4HI | GCNGC | 7 cut(s) | 51, 54, 453, 987, 1311, 1547, 2209 |
| FokI | GGATG | 4 cut(s) | 665, 1508, 2294, 2405 |
| FriOI | GRGCYC | 4 cut(s) | 1589, 1956, 2072, 2373 |
| Fsp4HI | GCNGC | 7 cut(s) | 51, 54, 453, 987, 1311, 1547, 2209 |
| FspBI | CTAG | 5 cut(s) | 186, 282, 327, 750, 2402 |
| FspI | TGCGCA | 2 cut(s) | 467, 1358 |
| GlaI | GCGC | 4 cut(s) | 331, 467, 1115, 1358 |
| GluI | GCNGC | 7 cut(s) | 51, 54, 453, 987, 1311, 1547, 2209 |
| GsuI | CTGGAG | 2 cut(s) | 702, 2387 |
| HaeII | RGCGCY | 1 cut(s) | 333 |
| HaeIII | GGCC | 5 cut(s) | 197, 399, 1191, 1800, 2323 |
| HapII | CCGG | 3 cut(s) | 1290, 1801, 1923 |
| HhaI | GCGC | 4 cut(s) | 332, 468, 1116, 1359 |
| Hin6I | GCGC | 4 cut(s) | 330, 466, 1114, 1357 |
| HinP1I | GCGC | 4 cut(s) | 330, 466, 1114, 1357 |
| HincII | GTYRAC | 2 cut(s) | 1060, 2490 |
| HindII | GTYRAC | 2 cut(s) | 1060, 2490 |
| HindIII | AAGCTT | 2 cut(s) | 1668, 1839 |
| HinfI | GANTC | 9 cut(s) | 25, 222, 1239, 1297, 1348, 1630, 1821, 1903, 2168 |
| HpaII | CCGG | 3 cut(s) | 1290, 1801, 1923 |
| HphI | GGTGA | 6 cut(s) | 652, 671, 1375, 1543, 2143, 2284 |
| Hpy166II | GTNNAC | 6 cut(s) | 233, 339, 790, 1060, 1579, 2490 |
| Hpy188I | TCNGA | 7 cut(s) | 204, 273, 1623, 1861, 1894, 2151, 2457 |
| Hpy8I | GTNNAC | 6 cut(s) | 233, 339, 790, 1060, 1579, 2490 |
| Hpy99I | CGWCG | 2 cut(s) | 1398, 2494 |
| HpyAV | CCTTC | 4 cut(s) | 1145, 1486, 1836, 2452 |
| HpyCH4IV | ACGT | 3 cut(s) | 1021, 1195, 2054 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 254, 465, 734, 1022, 1079, 1111, 1405, 1593, 2214 |
| HpyF3I | CTNAG | 8 cut(s) | 134, 333, 567, 1344, 1845, 1893, 1932, 2088 |
| HpySE526I | ACGT | 3 cut(s) | 1021, 1195, 2054 |
| HspAI | GCGC | 4 cut(s) | 330, 466, 1114, 1357 |
| Ksp22I | TGATCA | 1 cut(s) | 2305 |
| LmnI | GCTCC | 7 cut(s) | 88, 285, 1592, 1640, 1951, 2075, 2368 |
| Lsp1109I | GCAGC | 7 cut(s) | 37, 40, 439, 998, 1322, 1558, 2220 |
| LweI | GCATC | 5 cut(s) | 493, 551, 643, 1208, 1627 |
| MaeI | CTAG | 5 cut(s) | 186, 282, 327, 750, 2402 |
| MaeII | ACGT | 3 cut(s) | 1021, 1195, 2054 |
| MaeIII | GTNAC | 9 cut(s) | 377, 485, 535, 1220, 1226, 1498, 1693, 2131, 2252 |
| MfeI | CAATTG | 1 cut(s) | 1517 |
| MflI | RGATCY | 3 cut(s) | 273, 1009, 1742 |
| MhlI | GDGCHC | 5 cut(s) | 235, 1589, 1956, 2072, 2373 |
| MlsI | TGGCCA | 2 cut(s) | 399, 1191 |
| MluNI | TGGCCA | 2 cut(s) | 399, 1191 |
| MlyI | GAGTC | 3 cut(s) | 34, 1248, 1639 |
| MmeI | TCCRAC | 1 cut(s) | 66 |
| Mox20I | TGGCCA | 2 cut(s) | 399, 1191 |
| Mph1103I | ATGCAT | 1 cut(s) | 866 |
| MroXI | GAANNNNTTC | 1 cut(s) | 704 |
| MscI | TGGCCA | 2 cut(s) | 399, 1191 |
| MslI | CAYNNNNRTG | 1 cut(s) | 903 |
| Msp20I | TGGCCA | 2 cut(s) | 399, 1191 |
| MspCI | CTTAAG | 1 cut(s) | 1591 |
| MspI | CCGG | 3 cut(s) | 1290, 1801, 1923 |
| MspR9I | CCNGG | 4 cut(s) | 300, 439, 1290, 2102 |
| MunI | CAATTG | 1 cut(s) | 1517 |
| Mva1269I | GAATGC | 2 cut(s) | 1312, 2437 |
| MvaI | CCWGG | 3 cut(s) | 300, 439, 2102 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 254, 465, 734, 1022, 1079, 1111, 1405, 1593, 2214 |
| NciI | CCSGG | 1 cut(s) | 1290 |
| NdeI | CATATG | 2 cut(s) | 402, 1248 |
| NheI | GCTAGC | 1 cut(s) | 326 |
| NlaIV | GGNNCC | 4 cut(s) | 1011, 1588, 1921, 2370 |
| NmuCI | GTSAC | 5 cut(s) | 377, 535, 1226, 1498, 2131 |
| NsbI | TGCGCA | 2 cut(s) | 467, 1358 |
| NsiI | ATGCAT | 1 cut(s) | 866 |
| NspI | RCATGY | 4 cut(s) | 215, 257, 1785, 2276 |
| NspV | TTCGAA | 2 cut(s) | 629, 1990 |
| PaeI | GCATGC | 2 cut(s) | 257, 1785 |
| PagI | TCATGA | 1 cut(s) | 343 |
| PciI | ACATGT | 1 cut(s) | 2272 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2163 |
| PctI | GAATGC | 2 cut(s) | 1312, 2437 |
| PdmI | GAANNNNTTC | 1 cut(s) | 704 |
| PfeI | GAWTC | 6 cut(s) | 222, 1297, 1348, 1821, 1903, 2168 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1916, 2389 |
| PfoI | TCCNGGA | 1 cut(s) | 2100 |
| PkrI | GCNGC | 7 cut(s) | 52, 55, 454, 988, 1312, 1548, 2210 |
| PleI | GAGTC | 3 cut(s) | 33, 1247, 1638 |
| PpsI | GAGTC | 3 cut(s) | 33, 1247, 1638 |
| PscI | ACATGT | 1 cut(s) | 2272 |
| PshBI | ATTAAT | 1 cut(s) | 384 |
| PsiI | TTATAA | 1 cut(s) | 2418 |
| Psp124BI | GAGCTC | 2 cut(s) | 1956, 2072 |
| Psp6I | CCWGG | 3 cut(s) | 298, 437, 2100 |
| PspGI | CCWGG | 3 cut(s) | 298, 437, 2100 |
| PspN4I | GGNNCC | 4 cut(s) | 1011, 1588, 1921, 2370 |
| PstI | CTGCAG | 1 cut(s) | 457 |
| PsuI | RGATCY | 3 cut(s) | 273, 1009, 1742 |
| RsaI | GTAC | 2 cut(s) | 31, 1580 |
| RsaNI | GTAC | 2 cut(s) | 30, 1579 |
| RseI | CAYNNNNRTG | 1 cut(s) | 903 |
| SacI | GAGCTC | 2 cut(s) | 1956, 2072 |
| SalI | GTCGAC | 1 cut(s) | 2488 |
| SatI | GCNGC | 7 cut(s) | 51, 54, 453, 987, 1311, 1547, 2209 |
| SchI | GAGTC | 3 cut(s) | 34, 1248, 1639 |
| ScrFI | CCNGG | 4 cut(s) | 300, 439, 1290, 2102 |
| SduI | GDGCHC | 5 cut(s) | 235, 1589, 1956, 2072, 2373 |
| SfaNI | GCATC | 5 cut(s) | 493, 551, 643, 1208, 1627 |
| SfcI | CTRYAG | 6 cut(s) | 360, 453, 738, 1074, 1403, 2356 |
| SfuI | TTCGAA | 2 cut(s) | 629, 1990 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 903 |
| SmlI | CTYRAG | 2 cut(s) | 677, 1591 |
| SmoI | CTYRAG | 2 cut(s) | 677, 1591 |
| SphI | GCATGC | 2 cut(s) | 257, 1785 |
| SsiI | CCGC | 2 cut(s) | 1541, 2480 |
| SspMI | CTAG | 5 cut(s) | 186, 282, 327, 750, 2402 |
| SstI | GAGCTC | 2 cut(s) | 1956, 2072 |
| StyD4I | CCNGG | 4 cut(s) | 298, 437, 1288, 2100 |
| StyI | CCWWGG | 2 cut(s) | 1258, 1659 |
| TaiI | ACGT | 3 cut(s) | 1024, 1198, 2057 |
| TaqI | TCGA | 9 cut(s) | 105, 225, 423, 629, 1174, 1990, 2157, 2166, 2489 |
| TaqII | GACCGA | 1 cut(s) | 468 |
| TatI | WGTACW | 1 cut(s) | 1578 |
| TfiI | GAWTC | 6 cut(s) | 222, 1297, 1348, 1821, 1903, 2168 |
| TscAI | CASTG | 8 cut(s) | 475, 726, 1046, 1083, 1231, 1556, 1856, 2308 |
| TseFI | GTSAC | 5 cut(s) | 377, 535, 1226, 1498, 2131 |
| TseI | GCWGC | 7 cut(s) | 50, 53, 452, 986, 1310, 1546, 2208 |
| Tsp45I | GTSAC | 5 cut(s) | 377, 535, 1226, 1498, 2131 |
| TspRI | CASTG | 8 cut(s) | 475, 726, 1046, 1083, 1231, 1556, 1856, 2308 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1916, 2389 |
| Vha464I | CTTAAG | 1 cut(s) | 1591 |
| VneI | GTGCAC | 1 cut(s) | 231 |
| VspI | ATTAAT | 1 cut(s) | 384 |
| XapI | RAATTY | 2 cut(s) | 556, 1427 |
| XbaI | TCTAGA | 1 cut(s) | 2401 |
| XceI | RCATGY | 4 cut(s) | 215, 257, 1785, 2276 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 41, 1945 |
| XmiI | GTMKAC | 1 cut(s) | 2489 |
| XmnI | GAANNNNTTC | 1 cut(s) | 704 |
| XspI | CTAG | 5 cut(s) | 186, 282, 327, 750, 2402 |
| Zsp2I | ATGCAT | 1 cut(s) | 866 |