Prupe.4G281300_v2.0.a1

glycosyltransferase At5g03795

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000727
Physical Location & Seq
Reverse (-)
23863118 .. 23870350
7233 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G281300.1

Sequence Viewer

Length: 1569 bp
ATGAGGCCTACCAGAAAGACACAAGTCTCTTCCATATCCTCAATTTTAGTGGGATTGCTTGTAATCCCTTTGGTGGTTTTGTTGGTAATCTTTCTCATACACCCAACTGCCTTCAGCTCTTCATCATTCTCGTCGTCATCATGGGAGACTACACGGAATCCAGTAGCTAGTAATTTTACTAGTAATGGTAGAAGCAACTACTCTGTTCCTTCATCTACAGAAGAAATATGGCAGCCTCAACCATCACAAGCTCCAGCTTTCACTTTCTCAAATAATCGAAGTGGTGCCCCAGCTCCTGCCCCTCAAATATTTGGAGTTGATGATGAAGTGCAAGAGACGAAAACCCAGCAAGTAGAAGGACCTAATAAAACAGTATCATTGAGCAGCAGCAGCAGCAGGAGCAGTCAGCTTGAAAAATTAGAAGCAAGTTTGGGTAGAGCAAGGTCTTCGATAAGAGAAGCGGCTAAAGTTAGAAACAAGACATCAACCCATCAAGACCCTGATTATGTTCCTCGAGGCCCCATATATCGGAACCCTAATGCTTTTCATAGGAGTTACCTAGAAATGGAGAAGTTGTTCAAGATATATGTTTACGAAGAAGGACAGGTCCCAATATTTCATGACGGTCCATGCTTCCATATGTATTTAACAGAAGGCAGGTTTATTCATGAGATGGAGAAGGGTAAATTGTACCGTACAACAGACCCAAATCAGGCACTTGTCTATTTCCTTCCCTTCAGTGTGGTTAGAATGGTTCAGTTCCTGTATGTGCCTGACTCATATGATCGAAATGGCTTGAAGCTTGCGGTCATCGACTACATTAATCTCATTGCTCATAAGCATCCCTTCTGGAACCGAAGCCTCGGCGCTGATCATTTCATGCTATCTTGCCACGATTGGGGGCCATTTACAACTACATTTGTCCCCCATTTATTCCACAAGTCTATTAGGGTTTTGTGCAATGCCAATACTTCCGAAGGATTTAATCCCTCTAAAGATGCGTCGCTTCCAGAAATTAAGCTTCTGACATCGAAAATCCCAAGGCTTGGTGGTCATCCTGCTTCAAGTCGATCCACACTAGCTTTCTTTGCAGGCGGTCTGCATGGCCATATTAGGTACCTTCTTCTAAATGAATGGAAAGGCAAAGACCAAGATGTGCAAGTCTATGAAAAAGTTCCTCACGGAGTGTCCTATGAAGAAATGATGAAGAGCAGCAAGTTTTGCTTATGCCCAAGTGGGTATGAAGTAGCAAGTCCAAGGGTGGTAGAATCAATCTATGCCGAGTGCGTCCCCGTGTTGATTTCAGATGGCTATATTCCACCTTTTAGTGATGTGTTGGATTGGAAGTCGTTTTCTGTGCAAGTGCCAGTCAAGAATATATCTGACATTAAGAACATATTGATGAGCATATCCAATAGACAGTACCTCAGAATGCAAAGGAGGTTGAAACAAGTGCAACGACATTTTTTGATGAATGGACCTCCTAAGAGATATGATGTTTTCCACATGATTGTGCACTCTATTTGGCTCAGGAGGTTAAACATTCGCATTCAAGATCTATTGATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Exostosin

Protein Analysis

523

Amino Acids

59.37

Weight (kDa)

9.32

Isoelectric Point (pI)

50.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 513
Acc36I ACCTGC 1 cut(s) 648
Acc65I GGTACC 1 cut(s) 1116
AccB1I GGYRCC 2 cut(s) 284, 1116
AccB7I CCANNNNNTGG 1 cut(s) 1046
AciI CCGC 3 cut(s) 461, 806, 1095
AclWI GGATC 1 cut(s) 1065
AcoI YGGCCR 1 cut(s) 1105
AcuI CTGAAG 2 cut(s) 97, 721
AdeI CACNNNGTG 1 cut(s) 1186
AfaI GTAC 4 cut(s) 692, 697, 1118, 1424
AfiI CCNNNNNNNGG 6 cut(s) 73, 528, 565, 712, 898, 1046
AgsI TTSAA 6 cut(s) 413, 580, 799, 1065, 1447, 1553
AhlI ACTAGT 1 cut(s) 179
AloI GAACNNNNNNTCC 2 cut(s) 560, 592
AluBI AGCT 9 cut(s) 117, 167, 251, 257, 293, 409, 802, 1021, 1082
AluI AGCT 9 cut(s) 117, 167, 251, 257, 293, 409, 802, 1021, 1082
Alw21I GWGCWC 1 cut(s) 1518
Alw26I GTCTC 3 cut(s) 31, 140, 329
Alw44I GTGCAC 1 cut(s) 1514
AlwI GGATC 1 cut(s) 1065
AlwNI CAGNNNCTG 2 cut(s) 296, 763
Ama87I CYCGRG 1 cut(s) 513
AoxI GGCC 4 cut(s) 5, 517, 902, 1105
ApaLI GTGCAC 1 cut(s) 1514
ApeKI GCWGC 6 cut(s) 232, 384, 387, 390, 393, 1212
AseI ATTAAT 1 cut(s) 822
Asp700I GAANNNNTTC 2 cut(s) 575, 1173
Asp718I GGTACC 1 cut(s) 1116
AspLEI GCGC 1 cut(s) 869
AspS9I GGNCC 6 cut(s) 359, 518, 607, 626, 902, 1478
AvaI CYCGRG 1 cut(s) 513
AvaII GGWCC 4 cut(s) 359, 607, 626, 1478
BaeGI GKGCMC 2 cut(s) 289, 1518
BalI TGGCCA 1 cut(s) 1107
BanI GGYRCC 2 cut(s) 284, 1116
BbsI GAAGAC 1 cut(s) 438
Bbv12I GWGCWC 1 cut(s) 1518
BbvI GCAGC 6 cut(s) 244, 396, 399, 402, 405, 1224
BccI CCATC 4 cut(s) 250, 498, 667, 1301
BcgI CGANNNNNNTGC 2 cut(s) 429, 463
BclI TGATCA 1 cut(s) 871
BcoDI GTCTC 3 cut(s) 31, 140, 329
BcuI ACTAGT 1 cut(s) 179
BfaI CTAG 4 cut(s) 168, 180, 560, 1079
BfmI CTRYAG 1 cut(s) 216
BfoI RGCGCY 1 cut(s) 870
BfuAI ACCTGC 1 cut(s) 648
BglII AGATCT 1 cut(s) 1555
BisI GCNGC 7 cut(s) 233, 385, 388, 391, 394, 462, 1213
BlsI GCNGC 7 cut(s) 234, 386, 389, 392, 395, 463, 1214
Bme18I GGWCC 4 cut(s) 359, 607, 626, 1478
BmeT110I CYCGRG 1 cut(s) 513
BmgT120I GGNCC 6 cut(s) 359, 518, 607, 626, 902, 1478
BmiI GGNNCC 7 cut(s) 286, 520, 533, 609, 854, 903, 1118
BmsI GCATC 2 cut(s) 850, 988
BoxI GACNNNNGTC 1 cut(s) 23
BpiI GAAGAC 1 cut(s) 438
BpmI CTGGAG 1 cut(s) 237
Bpu10I CCTNAGC 1 cut(s) 1529
BsaJI CCNNGG 3 cut(s) 862, 1040, 1256
BsaXI ACNNNNNCTCC 2 cut(s) 560, 590
Bsc4I CCNNNNNNNGG 6 cut(s) 73, 528, 565, 712, 898, 1046
Bse1I ACTGG 2 cut(s) 161, 1367
Bse3DI GCAATG 2 cut(s) 828, 967
BseDI CCNNGG 3 cut(s) 862, 1040, 1256
BseGI GGATG 2 cut(s) 841, 1054
BseLI CCNNNNNNNGG 6 cut(s) 73, 528, 565, 712, 898, 1046
BseMI GCAATG 2 cut(s) 828, 967
BseMII CTCAG 2 cut(s) 1441, 1543
BseNI ACTGG 2 cut(s) 161, 1367
BseSI GKGCMC 2 cut(s) 289, 1518
BseXI GCAGC 6 cut(s) 244, 396, 399, 402, 405, 1224
BseYI CCCAGC 2 cut(s) 289, 345
BshFI GGCC 4 cut(s) 7, 519, 904, 1107
BshNI GGYRCC 2 cut(s) 284, 1116
BsiHKAI GWGCWC 1 cut(s) 1518
BsiHKCI CYCGRG 1 cut(s) 513
BslFI GGGAC 3 cut(s) 593, 908, 1274
BslI CCNNNNNNNGG 6 cut(s) 73, 528, 565, 712, 898, 1046
BsmAI GTCTC 3 cut(s) 31, 140, 329
BsmBI CGTCTC 1 cut(s) 329
BsmFI GGGAC 3 cut(s) 593, 908, 1274
BsmI GAATGC 2 cut(s) 1437, 1548
BsnI GGCC 4 cut(s) 7, 519, 904, 1107
BsoBI CYCGRG 1 cut(s) 513
Bsp1286I GDGCHC 2 cut(s) 289, 1518
Bsp143I GATC 4 cut(s) 784, 871, 1070, 1555
BspACI CCGC 3 cut(s) 461, 806, 1095
BspANI GGCC 4 cut(s) 7, 519, 904, 1107
BspCNI CTCAG 2 cut(s) 1440, 1542
BspHI TCATGA 2 cut(s) 619, 667
BspLI GGNNCC 7 cut(s) 286, 520, 533, 609, 854, 903, 1118
BspMI ACCTGC 1 cut(s) 648
BspPI GGATC 1 cut(s) 1065
BspQI GCTCTTC 2 cut(s) 124, 1202
BspT107I GGYRCC 2 cut(s) 284, 1116
BsrDI GCAATG 2 cut(s) 828, 967
BsrI ACTGG 2 cut(s) 161, 1367
BssECI CCNNGG 3 cut(s) 862, 1040, 1256
BssMI GATC 4 cut(s) 784, 871, 1070, 1555
BssT1I CCWWGG 2 cut(s) 1040, 1256
Bst4CI ACNGT 4 cut(s) 373, 626, 695, 1422
Bst6I CTCTTC 3 cut(s) 34, 124, 1202
BstAPI GCANNNNNTGC 1 cut(s) 1221
BstC8I GCNNGC 2 cut(s) 804, 1093
BstDEI CTNAG 3 cut(s) 1427, 1485, 1529
BstF5I GGATG 2 cut(s) 841, 1054
BstH2I RGCGCY 1 cut(s) 870
BstHHI GCGC 1 cut(s) 869
BstKTI GATC 4 cut(s) 787, 874, 1073, 1558
BstMAI GTCTC 3 cut(s) 31, 140, 329
BstMBI GATC 4 cut(s) 784, 871, 1070, 1555
BstMWI GCNNNNNNNGC 5 cut(s) 390, 393, 399, 1088, 1221
BstPAI GACNNNNGTC 1 cut(s) 23
BstSFI CTRYAG 1 cut(s) 216
BstSLI GKGCMC 2 cut(s) 289, 1518
BstV1I GCAGC 6 cut(s) 244, 396, 399, 402, 405, 1224
BstV2I GAAGAC 1 cut(s) 438
BstX2I RGATCY 1 cut(s) 1555
BstYI RGATCY 1 cut(s) 1555
BsuRI GGCC 4 cut(s) 7, 519, 904, 1107
BtsCI GGATG 2 cut(s) 841, 1054
BtsIMutI CAGTG 1 cut(s) 745
BveI ACCTGC 1 cut(s) 648
Cac8I GCNNGC 2 cut(s) 804, 1093
CaiI CAGNNNCTG 2 cut(s) 296, 763
CciI TCATGA 2 cut(s) 619, 667
CfoI GCGC 1 cut(s) 869
Cfr13I GGNCC 6 cut(s) 359, 518, 607, 626, 902, 1478
CseI GACGC 2 cut(s) 990, 1276
Csp6I GTAC 4 cut(s) 691, 696, 1117, 1423
CspCI CAANNNNNGTGG 2 cut(s) 30, 65
CviAII CATG 7 cut(s) 141, 620, 630, 668, 880, 1103, 1507
CviQI GTAC 4 cut(s) 691, 696, 1117, 1423
DdeI CTNAG 3 cut(s) 1427, 1485, 1529
DpnI GATC 4 cut(s) 786, 873, 1072, 1557
DpnII GATC 4 cut(s) 784, 871, 1070, 1555
DraIII CACNNNGTG 1 cut(s) 1186
EaeI YGGCCR 1 cut(s) 1105
Eam1104I CTCTTC 3 cut(s) 34, 124, 1202
EarI CTCTTC 3 cut(s) 34, 124, 1202
Eco130I CCWWGG 2 cut(s) 1040, 1256
Eco147I AGGCCT 1 cut(s) 7
Eco47I GGWCC 4 cut(s) 359, 607, 626, 1478
Eco57I CTGAAG 2 cut(s) 97, 721
Eco88I CYCGRG 1 cut(s) 513
EcoO109I RGGNCCY 3 cut(s) 359, 518, 607
EcoT14I CCWWGG 2 cut(s) 1040, 1256
ErhI CCWWGG 2 cut(s) 1040, 1256
Esp3I CGTCTC 1 cut(s) 329
FaeI CATG 7 cut(s) 144, 623, 633, 671, 883, 1106, 1510
FalI AAGNNNNNCTT 4 cut(s) 830, 862, 1208, 1240
FaqI GGGAC 3 cut(s) 593, 908, 1274
FatI CATG 7 cut(s) 140, 619, 629, 667, 879, 1102, 1506
FauNDI CATATG 2 cut(s) 639, 781
FbaI TGATCA 1 cut(s) 871
Fnu4HI GCNGC 7 cut(s) 233, 385, 388, 391, 394, 462, 1213
FokI GGATG 2 cut(s) 828, 1041
Fsp4HI GCNGC 7 cut(s) 233, 385, 388, 391, 394, 462, 1213
FspBI CTAG 4 cut(s) 168, 180, 560, 1079
GlaI GCGC 1 cut(s) 868
GluI GCNGC 7 cut(s) 233, 385, 388, 391, 394, 462, 1213
GsaI CCCAGC 2 cut(s) 293, 349
GsuI CTGGAG 1 cut(s) 237
HaeII RGCGCY 1 cut(s) 870
HaeIII GGCC 4 cut(s) 7, 519, 904, 1107
HgaI GACGC 2 cut(s) 990, 1276
HhaI GCGC 1 cut(s) 869
Hin1II CATG 7 cut(s) 144, 623, 633, 671, 883, 1106, 1510
Hin6I GCGC 1 cut(s) 867
HinP1I GCGC 1 cut(s) 867
HindIII AAGCTT 2 cut(s) 800, 1019
HinfI GANTC 3 cut(s) 157, 776, 1268
Hpy166II GTNNAC 2 cut(s) 592, 1516
Hpy188I TCNGA 6 cut(s) 531, 976, 1026, 1306, 1384, 1430
Hpy188III TCNNGA 9 cut(s) 494, 580, 620, 668, 850, 1010, 1372, 1531, 1553
Hpy8I GTNNAC 2 cut(s) 592, 1516
Hpy99I CGWCG 2 cut(s) 136, 1006
HpyCH4III ACNGT 4 cut(s) 373, 626, 695, 1422
HpyCH4V TGCA 9 cut(s) 331, 960, 1091, 1102, 1159, 1360, 1435, 1456, 1516
HpyF10VI GCNNNNNNNGC 5 cut(s) 390, 393, 399, 1088, 1221
HpyF3I CTNAG 3 cut(s) 1427, 1485, 1529
Hsp92II CATG 7 cut(s) 144, 623, 633, 671, 883, 1106, 1510
HspAI GCGC 1 cut(s) 867
KpnI GGTACC 1 cut(s) 1120
Ksp22I TGATCA 1 cut(s) 871
Kzo9I GATC 4 cut(s) 784, 871, 1070, 1555
LguI GCTCTTC 2 cut(s) 124, 1202
LmnI GCTCC 3 cut(s) 256, 298, 399
Lsp1109I GCAGC 6 cut(s) 244, 396, 399, 402, 405, 1224
LweI GCATC 2 cut(s) 850, 988
MaeI CTAG 4 cut(s) 168, 180, 560, 1079
MaeIII GTNAC 1 cut(s) 554
MalI GATC 4 cut(s) 786, 873, 1072, 1557
MboI GATC 4 cut(s) 784, 871, 1070, 1555
MboII GAAGA 8 cut(s) 21, 111, 233, 438, 608, 1115, 1208, 1219
MflI RGATCY 1 cut(s) 1555
MhlI GDGCHC 2 cut(s) 289, 1518
MlsI TGGCCA 1 cut(s) 1107
MluCI AATT 5 cut(s) 42, 172, 416, 686, 1014
MluNI TGGCCA 1 cut(s) 1107
MlyI GAGTC 1 cut(s) 770
MmeI TCCRAC 1 cut(s) 1317
Mox20I TGGCCA 1 cut(s) 1107
MroXI GAANNNNTTC 2 cut(s) 575, 1173
MscI TGGCCA 1 cut(s) 1107
MseI TTAA 6 cut(s) 647, 822, 984, 1017, 1389, 1538
MslI CAYNNNNRTG 2 cut(s) 1400, 1511
Msp20I TGGCCA 1 cut(s) 1107
Mva1269I GAATGC 2 cut(s) 1437, 1548
MwoI GCNNNNNNNGC 5 cut(s) 390, 393, 399, 1088, 1221
NdeI CATATG 2 cut(s) 639, 781
NdeII GATC 4 cut(s) 784, 871, 1070, 1555
NlaIII CATG 7 cut(s) 144, 623, 633, 671, 883, 1106, 1510
NlaIV GGNNCC 7 cut(s) 286, 520, 533, 609, 854, 903, 1118
NmeAIII GCCGAG 2 cut(s) 843, 1306
PaeR7I CTCGAG 1 cut(s) 513
PagI TCATGA 2 cut(s) 619, 667
PceI AGGCCT 1 cut(s) 7
PciSI GCTCTTC 2 cut(s) 124, 1202
PctI GAATGC 2 cut(s) 1437, 1548
PdmI GAANNNNTTC 2 cut(s) 575, 1173
PfeI GAWTC 2 cut(s) 157, 1268
PflMI CCANNNNNTGG 1 cut(s) 1046
PkrI GCNGC 7 cut(s) 234, 386, 389, 392, 395, 463, 1214
PleI GAGTC 1 cut(s) 770
PpsI GAGTC 1 cut(s) 770
PpuMI RGGWCCY 2 cut(s) 359, 607
PshAI GACNNNNGTC 1 cut(s) 23
PshBI ATTAAT 1 cut(s) 822
Psp5II RGGWCCY 2 cut(s) 359, 607
PspFI CCCAGC 2 cut(s) 289, 345
PspN4I GGNNCC 7 cut(s) 286, 520, 533, 609, 854, 903, 1118
PspPI GGNCC 6 cut(s) 359, 518, 607, 626, 902, 1478
PspPPI RGGWCCY 2 cut(s) 359, 607
PspXI VCTCGAGB 1 cut(s) 513
PstNI CAGNNNCTG 2 cut(s) 296, 763
PsuI RGATCY 1 cut(s) 1555
RsaI GTAC 4 cut(s) 692, 697, 1118, 1424
RsaNI GTAC 4 cut(s) 691, 696, 1117, 1423
RseI CAYNNNNRTG 2 cut(s) 1400, 1511
SapI GCTCTTC 2 cut(s) 124, 1202
SaqAI TTAA 6 cut(s) 647, 822, 984, 1017, 1389, 1538
SatI GCNGC 7 cut(s) 233, 385, 388, 391, 394, 462, 1213
Sau3AI GATC 4 cut(s) 784, 871, 1070, 1555
Sau96I GGNCC 6 cut(s) 359, 518, 607, 626, 902, 1478
SchI GAGTC 1 cut(s) 770
SduI GDGCHC 2 cut(s) 289, 1518
SfaNI GCATC 2 cut(s) 850, 988
SfcI CTRYAG 1 cut(s) 216
Sfr274I CTCGAG 1 cut(s) 513
SinI GGWCC 4 cut(s) 359, 607, 626, 1478
SlaI CTCGAG 1 cut(s) 513
SmiMI CAYNNNNRTG 2 cut(s) 1400, 1511
SmlI CTYRAG 1 cut(s) 513
SmoI CTYRAG 1 cut(s) 513
SpeI ACTAGT 1 cut(s) 179
Sse9I AATT 5 cut(s) 42, 172, 416, 686, 1014
SseBI AGGCCT 1 cut(s) 7
SsiI CCGC 3 cut(s) 461, 806, 1095
SspI AATATT 2 cut(s) 309, 615
SspMI CTAG 4 cut(s) 168, 180, 560, 1079
StuI AGGCCT 1 cut(s) 7
StyI CCWWGG 2 cut(s) 1040, 1256
TaaI ACNGT 4 cut(s) 373, 626, 695, 1422
TaqI TCGA 7 cut(s) 277, 449, 514, 787, 813, 1031, 1069
TasI AATT 5 cut(s) 42, 172, 416, 686, 1014
TauI GCSGC 1 cut(s) 464
TfiI GAWTC 2 cut(s) 157, 1268
Tru1I TTAA 6 cut(s) 647, 822, 984, 1017, 1389, 1538
Tru9I TTAA 6 cut(s) 647, 822, 984, 1017, 1389, 1538
TscAI CASTG 1 cut(s) 745
TseI GCWGC 6 cut(s) 232, 384, 387, 390, 393, 1212
TspGWI ACGGA 2 cut(s) 169, 1197
TspRI CASTG 1 cut(s) 745
Van91I CCANNNNNTGG 1 cut(s) 1046
VneI GTGCAC 1 cut(s) 1514
VpaK11BI GGWCC 4 cut(s) 359, 607, 626, 1478
VspI ATTAAT 1 cut(s) 822
XhoI CTCGAG 1 cut(s) 513
XmnI GAANNNNTTC 2 cut(s) 575, 1173
XspI CTAG 4 cut(s) 168, 180, 560, 1079
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.