Prupe.8G004600_v2.0.a1

glycosyltransferase At5g03795

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000727
Physical Location & Seq
Reverse (-)
367906 .. 370264
2359 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G004600.1

Sequence Viewer

Length: 1578 bp
ATGAAGCCTCTGAATAAACCATATTCTTTGTTTTCATCATTGTGGTCATCTTCTTCATATTATTCAGTCTTAATTTTAGTGTTTGTAGTACCCTTTTTTGTGATATCAGTGCTTGTTTGCACTTCGGGTTCGTCTTCATGGACATGGAGATTTGGCAACAAAATATTGGAGACTGACTATTCTTCATCCCGAGCTGTCTCTACAAGATCAAGACCTTCTCAAGTGCTTGAAGCTTCAGAAGCTCATCATATCAATTCTTCATCATCGTCAAAACCAAATGAAACAACAACACATCTTCTCCCTCATCAAATTGGAGAAAAACAAGAGATGGTATGGAATGATCAAGGCCTAGGAGCTGATGAAGTTAATGTGACTTCTGCATCAGCAGTAACTATAAAGAGATATAGCAGGTTAGAGAAACTTGAAGCAAATTTGGCTGGAGTTCGGGCTTCAATAAGAGAAGCTGCTCGAGTTCGAAATCTAACCTCTACCCATGAAGATCCCGACTATGTTCCTAAAGGACCAATATACAGGAATGCAAATGCTTTTCACAGGAGTTATTTGGAGATGGAGAGGCTTTTCAAGATATATGTATATGAAGAAGGAGACCCACCAATATTTCACAATGGTCCTTGCAAAAGCATATATTCTACAGAAGGGAGGTTTATTCATGAAATGGAAATGGACAATAACATTTACAAAACCACAGACCCTGATGAGGCCCTGGTTTATTTTCTCCCATTTAGTGTGGTAATGTTGGTTCAGTACCTCTATGCGGCCGACTCCCATAACACAGACTCCATTGGACGGGCTGTCATCGACTATGTCAATGTCATTTCCGATAAGCATCCCTTCTGGAATAGAAGCCTTGGCGCTGACCACTTTATGCTTTCTTGCCATGATTGGGGGCCGCGCACATCTTCTTATGTTCCTCATTTGTACCACAAGTCCATAAGAGTGTTATGCAACGCCAACACTTCTGAAGGATTCAATCCTTCTAAAGATGCCTCATTTCCAGAAATCCATCTCCGAACCGGGGAAATCAAAGGACTTGTTGGTGGGCTCTCCCCATCTCGCAGGTCGATTCTTGCCTTCTTCGCAGGCCGGCTACATGGCCACATAAGGTACTTGCTTCTAAATGAATGGAAAGAGAAAGACCAAGACGTGCAAGTTTACGACCAACTTCCCCACGGAGTGTCCTATGAATTGATGTTGAAGAAGAGCAGGTTTTGCTTATGCCCTAGCGGTTATGAAGTGGCAAGCCCCAGGGTTGTGGAAGCCATATATGCTGAATGCATTCCTGTGTTGATATCTGATAGCTATGTTCCACCATTCAGTGATGTTCTTGATTGGAAGTCATTTTCTGTCCAAATACAAGTGGAGGACATACCAAACATCAAAACAATACTAATGGGAATATCTCAGAGTCAGTATTTGAGAATGCACAGGAGAGTGAAACAGGTTCAAAGGCATTTTGTGGTAAACGGACCCTCCAAGAGATTTGATGTTTTCAATATGATTGTTCACTCTATTTGGCTCAGGAGGTTGAACATCCGCATTGAGGATCAAGTTGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Exostosin

Protein Analysis

526

Amino Acids

60.0

Weight (kDa)

7.34

Isoelectric Point (pI)

50.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 399, 1068, 1215
AccII CGCG 1 cut(s) 913
AciI CCGC 4 cut(s) 776, 911, 1245, 1555
AclWI GGATC 2 cut(s) 494, 1572
AcoI YGGCCR 2 cut(s) 777, 1114
AcsI RAATTY 1 cut(s) 430
AcuI CTGAAG 2 cut(s) 219, 1002
AdeI CACNNNGTG 1 cut(s) 1195
AfaI GTAC 4 cut(s) 90, 767, 941, 1127
AfiI CCNNNNNNNGG 6 cut(s) 718, 775, 807, 904, 1036, 1561
AhdI GACNNNNNGTC 1 cut(s) 812
AjiI CACGTC 1 cut(s) 1165
AjnI CCWGG 2 cut(s) 723, 1265
AluBI AGCT 6 cut(s) 194, 233, 242, 356, 464, 1320
AluI AGCT 6 cut(s) 194, 233, 242, 356, 464, 1320
Alw26I GTCTC 3 cut(s) 164, 202, 600
AlwI GGATC 2 cut(s) 494, 1572
AlwNI CAGNNNCTG 1 cut(s) 713
Ama87I CYCGRG 2 cut(s) 189, 468
AoxI GGCC 6 cut(s) 346, 720, 777, 908, 1102, 1114
ApeKI GCWGC 1 cut(s) 464
ApoI RAATTY 1 cut(s) 430
Asp700I GAANNNNTTC 1 cut(s) 1296
AspA2I CCTAGG 1 cut(s) 349
AspLEI GCGC 2 cut(s) 875, 915
AspS9I GGNCC 5 cut(s) 521, 629, 721, 908, 1487
AsuC2I CCSGG 1 cut(s) 1036
AsuII TTCGAA 1 cut(s) 475
AvaI CYCGRG 2 cut(s) 189, 468
AvaII GGWCC 3 cut(s) 521, 629, 1487
AvrII CCTAGG 1 cut(s) 349
BalI TGGCCA 1 cut(s) 1116
BanII GRGCYC 1 cut(s) 1065
BbsI GAAGAC 1 cut(s) 126
BbvI GCAGC 1 cut(s) 451
BccI CCATC 4 cut(s) 322, 562, 1032, 1078
BciT130I CCWGG 2 cut(s) 725, 1267
BclI TGATCA 1 cut(s) 340
BcnI CCSGG 1 cut(s) 1036
BcoDI GTCTC 3 cut(s) 164, 202, 600
BfaI CTAG 2 cut(s) 350, 1242
BfmI CTRYAG 1 cut(s) 651
BfoI RGCGCY 1 cut(s) 876
BfuAI ACCTGC 3 cut(s) 399, 1068, 1215
BisI GCNGC 3 cut(s) 465, 777, 911
BlnI CCTAGG 1 cut(s) 349
BlsI GCNGC 3 cut(s) 466, 778, 912
Bme1390I CCNGG 3 cut(s) 725, 1036, 1267
Bme18I GGWCC 3 cut(s) 521, 629, 1487
BmeRI GACNNNNNGTC 1 cut(s) 812
BmeT110I CYCGRG 2 cut(s) 189, 468
BmgBI CACGTC 1 cut(s) 1165
BmgT120I GGNCC 5 cut(s) 521, 629, 721, 908, 1487
BmiI GGNNCC 2 cut(s) 909, 1489
BmrFI CCNGG 3 cut(s) 725, 1036, 1267
BmsI GCATC 3 cut(s) 389, 856, 994
BpiI GAAGAC 1 cut(s) 126
BpmI CTGGAG 1 cut(s) 459
Bpu10I CCTNAGC 1 cut(s) 1538
Bpu14I TTCGAA 1 cut(s) 475
BpuEI CTTGAG 1 cut(s) 204
BpuMI CCSGG 1 cut(s) 1036
BsaBI GATNNNNATC 1 cut(s) 846
BsaI GGTCTC 1 cut(s) 600
BsaJI CCNNGG 7 cut(s) 349, 723, 868, 1035, 1189, 1265, 1266
BsaXI ACNNNNNCTCC 6 cut(s) 282, 312, 782, 812, 1475, 1505
Bsc4I CCNNNNNNNGG 6 cut(s) 718, 775, 807, 904, 1036, 1561
Bse118I RCCGGY 1 cut(s) 1104
Bse8I GATNNNNATC 1 cut(s) 846
BseBI CCWGG 2 cut(s) 725, 1267
BseDI CCNNGG 7 cut(s) 349, 723, 868, 1035, 1189, 1265, 1266
BseGI GGATG 3 cut(s) 185, 847, 1551
BseJI GATNNNNATC 1 cut(s) 846
BseLI CCNNNNNNNGG 6 cut(s) 718, 775, 807, 904, 1036, 1561
BseMII CTCAG 2 cut(s) 1436, 1552
BseX3I CGGCCG 1 cut(s) 777
BseXI GCAGC 1 cut(s) 451
Bsh1236I CGCG 1 cut(s) 913
Bsh1285I CGRYCG 1 cut(s) 780
BshFI GGCC 6 cut(s) 348, 722, 779, 910, 1104, 1116
BsiEI CGRYCG 1 cut(s) 780
BsiHKCI CYCGRG 2 cut(s) 189, 468
BsiSI CCGG 2 cut(s) 1035, 1105
BslI CCNNNNNNNGG 6 cut(s) 718, 775, 807, 904, 1036, 1561
BsmAI GTCTC 3 cut(s) 164, 202, 600
BsmI GAATGC 4 cut(s) 541, 1296, 1298, 1446
BsnI GGCC 6 cut(s) 348, 722, 779, 910, 1104, 1116
Bso31I GGTCTC 1 cut(s) 600
BsoBI CYCGRG 2 cut(s) 189, 468
Bsp119I TTCGAA 1 cut(s) 475
Bsp1286I GDGCHC 1 cut(s) 1065
Bsp143I GATC 4 cut(s) 206, 340, 499, 1564
BspACI CCGC 4 cut(s) 776, 911, 1245, 1555
BspANI GGCC 6 cut(s) 348, 722, 779, 910, 1104, 1116
BspCNI CTCAG 2 cut(s) 1435, 1551
BspFNI CGCG 1 cut(s) 913
BspHI TCATGA 1 cut(s) 670
BspLI GGNNCC 2 cut(s) 909, 1489
BspMI ACCTGC 3 cut(s) 399, 1068, 1215
BspPI GGATC 2 cut(s) 494, 1572
BspQI GCTCTTC 1 cut(s) 1214
BspT104I TTCGAA 1 cut(s) 475
BspTNI GGTCTC 1 cut(s) 600
BsrFI RCCGGY 1 cut(s) 1104
BssAI RCCGGY 1 cut(s) 1104
BssECI CCNNGG 7 cut(s) 349, 723, 868, 1035, 1189, 1265, 1266
BssMI GATC 4 cut(s) 206, 340, 499, 1564
BssT1I CCWWGG 2 cut(s) 349, 868
Bst2UI CCWGG 2 cut(s) 725, 1267
Bst6I CTCTTC 1 cut(s) 1214
BstAPI GCANNNNNTGC 1 cut(s) 1230
BstBI TTCGAA 1 cut(s) 475
BstC8I GCNNGC 3 cut(s) 1102, 1106, 1261
BstDEI CTNAG 2 cut(s) 1422, 1538
BstDSI CCRYGG 1 cut(s) 1189
BstF5I GGATG 3 cut(s) 185, 847, 1551
BstFNI CGCG 1 cut(s) 913
BstH2I RGCGCY 1 cut(s) 876
BstHHI GCGC 2 cut(s) 875, 915
BstKTI GATC 4 cut(s) 209, 343, 502, 1567
BstMAI GTCTC 3 cut(s) 164, 202, 600
BstMBI GATC 4 cut(s) 206, 340, 499, 1564
BstMCI CGRYCG 1 cut(s) 780
BstMWI GCNNNNNNNGC 5 cut(s) 239, 434, 1097, 1230, 1286
BstNI CCWGG 2 cut(s) 725, 1267
BstSCI CCNGG 3 cut(s) 723, 1034, 1265
BstSFI CTRYAG 1 cut(s) 651
BstUI CGCG 1 cut(s) 913
BstV1I GCAGC 1 cut(s) 451
BstV2I GAAGAC 1 cut(s) 126
BstX2I RGATCY 1 cut(s) 499
BstXI CCANNNNNNTGG 1 cut(s) 1273
BstYI RGATCY 1 cut(s) 499
BstZI CGGCCG 1 cut(s) 777
BsuRI GGCC 6 cut(s) 348, 722, 779, 910, 1104, 1116
BtgI CCRYGG 1 cut(s) 1189
BtrI CACGTC 1 cut(s) 1165
BtsCI GGATG 3 cut(s) 185, 847, 1551
BtsIMutI CAGTG 2 cut(s) 114, 1342
BveI ACCTGC 3 cut(s) 399, 1068, 1215
Cac8I GCNNGC 3 cut(s) 1102, 1106, 1261
CaiI CAGNNNCTG 1 cut(s) 713
CciI TCATGA 1 cut(s) 670
CfoI GCGC 2 cut(s) 875, 915
Cfr10I RCCGGY 1 cut(s) 1104
Cfr13I GGNCC 5 cut(s) 521, 629, 721, 908, 1487
Csp6I GTAC 4 cut(s) 89, 766, 940, 1126
CviAII CATG 6 cut(s) 138, 144, 494, 671, 899, 1112
CviQI GTAC 4 cut(s) 89, 766, 940, 1126
DdeI CTNAG 2 cut(s) 1422, 1538
DpnI GATC 4 cut(s) 208, 342, 501, 1566
DpnII GATC 4 cut(s) 206, 340, 499, 1564
DraIII CACNNNGTG 1 cut(s) 1195
DriI GACNNNNNGTC 1 cut(s) 812
EaeI YGGCCR 2 cut(s) 777, 1114
EagI CGGCCG 1 cut(s) 777
Eam1104I CTCTTC 1 cut(s) 1214
Eam1105I GACNNNNNGTC 1 cut(s) 812
EarI CTCTTC 1 cut(s) 1214
EclXI CGGCCG 1 cut(s) 777
Eco130I CCWWGG 2 cut(s) 349, 868
Eco147I AGGCCT 1 cut(s) 348
Eco24I GRGCYC 1 cut(s) 1065
Eco31I GGTCTC 1 cut(s) 600
Eco32I GATATC 2 cut(s) 105, 1311
Eco47I GGWCC 3 cut(s) 521, 629, 1487
Eco52I CGGCCG 1 cut(s) 777
Eco57I CTGAAG 2 cut(s) 219, 1002
Eco88I CYCGRG 2 cut(s) 189, 468
EcoO109I RGGNCCY 1 cut(s) 721
EcoRII CCWGG 2 cut(s) 723, 1265
EcoRV GATATC 2 cut(s) 105, 1311
EcoT14I CCWWGG 2 cut(s) 349, 868
EcoT22I ATGCAT 1 cut(s) 1298
EcoT38I GRGCYC 1 cut(s) 1065
ErhI CCWWGG 2 cut(s) 349, 868
FaeI CATG 6 cut(s) 141, 147, 497, 674, 902, 1115
FalI AAGNNNNNCTT 2 cut(s) 836, 868
FatI CATG 6 cut(s) 137, 143, 493, 670, 898, 1111
FbaI TGATCA 1 cut(s) 340
Fnu4HI GCNGC 3 cut(s) 465, 777, 911
FokI GGATG 3 cut(s) 172, 834, 1538
FriOI GRGCYC 1 cut(s) 1065
Fsp4HI GCNGC 3 cut(s) 465, 777, 911
FspBI CTAG 2 cut(s) 350, 1242
GlaI GCGC 2 cut(s) 874, 914
GluI GCNGC 3 cut(s) 465, 777, 911
GsuI CTGGAG 1 cut(s) 459
HaeII RGCGCY 1 cut(s) 876
HaeIII GGCC 6 cut(s) 348, 722, 779, 910, 1104, 1116
HapII CCGG 2 cut(s) 1035, 1105
HhaI GCGC 2 cut(s) 875, 915
Hin1II CATG 6 cut(s) 141, 147, 497, 674, 902, 1115
Hin6I GCGC 2 cut(s) 873, 913
HinP1I GCGC 2 cut(s) 873, 913
HindIII AAGCTT 1 cut(s) 231
HinfI GANTC 5 cut(s) 782, 797, 987, 1084, 1426
HpaII CCGG 2 cut(s) 1035, 1105
Hpy166II GTNNAC 3 cut(s) 1174, 1483, 1525
Hpy188I TCNGA 7 cut(s) 12, 238, 841, 982, 1031, 1315, 1425
Hpy188III TCNNGA 9 cut(s) 189, 210, 503, 583, 671, 856, 1016, 1346, 1540
Hpy8I GTNNAC 3 cut(s) 1174, 1483, 1525
HpyAV CCTTC 7 cut(s) 225, 596, 650, 862, 977, 1005, 1102
HpyCH4IV ACGT 1 cut(s) 1164
HpyCH4V TGCA 8 cut(s) 120, 380, 539, 636, 966, 1168, 1296, 1444
HpyF10VI GCNNNNNNNGC 5 cut(s) 239, 434, 1097, 1230, 1286
HpyF3I CTNAG 2 cut(s) 1422, 1538
HpySE526I ACGT 1 cut(s) 1164
Hsp92II CATG 6 cut(s) 141, 147, 497, 674, 902, 1115
HspAI GCGC 2 cut(s) 873, 913
KroI GCCGGC 1 cut(s) 1104
KroNI GCCGGC 1 cut(s) 1106
Ksp22I TGATCA 1 cut(s) 340
Kzo9I GATC 4 cut(s) 206, 340, 499, 1564
LguI GCTCTTC 1 cut(s) 1214
LmnI GCTCC 1 cut(s) 353
Lsp1109I GCAGC 1 cut(s) 451
LweI GCATC 3 cut(s) 389, 856, 994
MaeI CTAG 2 cut(s) 350, 1242
MaeII ACGT 1 cut(s) 1164
MaeIII GTNAC 2 cut(s) 370, 388
MalI GATC 4 cut(s) 208, 342, 501, 1566
MboI GATC 4 cut(s) 206, 340, 499, 1564
MflI RGATCY 1 cut(s) 499
MhlI GDGCHC 1 cut(s) 1065
MlsI TGGCCA 1 cut(s) 1116
MluCI AATT 5 cut(s) 72, 253, 309, 430, 1205
MluNI TGGCCA 1 cut(s) 1116
MlyI GAGTC 3 cut(s) 776, 791, 1435
Mox20I TGGCCA 1 cut(s) 1116
Mph1103I ATGCAT 1 cut(s) 1298
MroNI GCCGGC 1 cut(s) 1104
MroXI GAANNNNTTC 1 cut(s) 1296
MscI TGGCCA 1 cut(s) 1116
MseI TTAA 2 cut(s) 71, 366
MslI CAYNNNNRTG 4 cut(s) 40, 142, 956, 1301
Msp20I TGGCCA 1 cut(s) 1116
MspI CCGG 2 cut(s) 1035, 1105
MspR9I CCNGG 3 cut(s) 725, 1036, 1267
Mva1269I GAATGC 4 cut(s) 541, 1296, 1298, 1446
MvaI CCWGG 2 cut(s) 725, 1267
MvnI CGCG 1 cut(s) 913
MwoI GCNNNNNNNGC 5 cut(s) 239, 434, 1097, 1230, 1286
NaeI GCCGGC 1 cut(s) 1106
NciI CCSGG 1 cut(s) 1036
NdeII GATC 4 cut(s) 206, 340, 499, 1564
NgoMIV GCCGGC 1 cut(s) 1104
NlaIII CATG 6 cut(s) 141, 147, 497, 674, 902, 1115
NlaIV GGNNCC 2 cut(s) 909, 1489
NmuCI GTSAC 1 cut(s) 370
NsiI ATGCAT 1 cut(s) 1298
NspV TTCGAA 1 cut(s) 475
PaeR7I CTCGAG 1 cut(s) 468
PagI TCATGA 1 cut(s) 670
PasI CCCWGGG 1 cut(s) 1266
PceI AGGCCT 1 cut(s) 348
PciSI GCTCTTC 1 cut(s) 1214
PctI GAATGC 4 cut(s) 541, 1296, 1298, 1446
PdiI GCCGGC 1 cut(s) 1106
PdmI GAANNNNTTC 1 cut(s) 1296
PfeI GAWTC 2 cut(s) 987, 1084
PflFI GACNNNGTC 1 cut(s) 824
PkrI GCNGC 3 cut(s) 466, 778, 912
PleI GAGTC 3 cut(s) 776, 791, 1434
PpsI GAGTC 3 cut(s) 776, 791, 1434
Psp6I CCWGG 2 cut(s) 723, 1265
PspGI CCWGG 2 cut(s) 723, 1265
PspN4I GGNNCC 2 cut(s) 909, 1489
PspPI GGNCC 5 cut(s) 521, 629, 721, 908, 1487
PspXI VCTCGAGB 1 cut(s) 468
PsrI GAACNNNNNNTAC 2 cut(s) 744, 776
PstNI CAGNNNCTG 1 cut(s) 713
PsuI RGATCY 1 cut(s) 499
PsyI GACNNNGTC 1 cut(s) 824
RsaI GTAC 4 cut(s) 90, 767, 941, 1127
RsaNI GTAC 4 cut(s) 89, 766, 940, 1126
RseI CAYNNNNRTG 4 cut(s) 40, 142, 956, 1301
SapI GCTCTTC 1 cut(s) 1214
SaqAI TTAA 2 cut(s) 71, 366
SatI GCNGC 3 cut(s) 465, 777, 911
Sau3AI GATC 4 cut(s) 206, 340, 499, 1564
Sau96I GGNCC 5 cut(s) 521, 629, 721, 908, 1487
SchI GAGTC 3 cut(s) 776, 791, 1435
ScrFI CCNGG 3 cut(s) 725, 1036, 1267
SduI GDGCHC 1 cut(s) 1065
SfaNI GCATC 3 cut(s) 389, 856, 994
SfcI CTRYAG 1 cut(s) 651
Sfr274I CTCGAG 1 cut(s) 468
SfuI TTCGAA 1 cut(s) 475
SinI GGWCC 3 cut(s) 521, 629, 1487
SlaI CTCGAG 1 cut(s) 468
SmiMI CAYNNNNRTG 4 cut(s) 40, 142, 956, 1301
SmlI CTYRAG 2 cut(s) 219, 468
SmoI CTYRAG 2 cut(s) 219, 468
Sse9I AATT 5 cut(s) 72, 253, 309, 430, 1205
SseBI AGGCCT 1 cut(s) 348
SsiI CCGC 4 cut(s) 776, 911, 1245, 1555
SspI AATATT 2 cut(s) 165, 618
SspMI CTAG 2 cut(s) 350, 1242
StuI AGGCCT 1 cut(s) 348
StyD4I CCNGG 3 cut(s) 723, 1034, 1265
StyI CCWWGG 2 cut(s) 349, 868
TaiI ACGT 1 cut(s) 1167
TaqI TCGA 4 cut(s) 469, 475, 819, 1082
TasI AATT 5 cut(s) 72, 253, 309, 430, 1205
TauI GCSGC 2 cut(s) 779, 913
TfiI GAWTC 2 cut(s) 987, 1084
Tru1I TTAA 2 cut(s) 71, 366
Tru9I TTAA 2 cut(s) 71, 366
TscAI CASTG 2 cut(s) 114, 1342
TseFI GTSAC 1 cut(s) 370
TseI GCWGC 1 cut(s) 464
Tsp45I GTSAC 1 cut(s) 370
TspGWI ACGGA 2 cut(s) 1206, 1500
TspRI CASTG 2 cut(s) 114, 1342
Tth111I GACNNNGTC 1 cut(s) 824
VpaK11BI GGWCC 3 cut(s) 521, 629, 1487
XapI RAATTY 1 cut(s) 430
XhoI CTCGAG 1 cut(s) 468
XmaJI CCTAGG 1 cut(s) 349
XmnI GAANNNNTTC 1 cut(s) 1296
XspI CTAG 2 cut(s) 350, 1242
Zsp2I ATGCAT 1 cut(s) 1298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.