Prupe.7G121600_v2.0.a1

Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000727
Physical Location & Seq
Reverse (-)
14471118 .. 14474276
3159 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G121600.1

Sequence Viewer

Length: 1626 bp
ATGGCCAATAGCAGCAAAAGATGGGGCAATCAATATGCATGTTCTTCTTCAGCTTCATCAATGGCCATCTTCTTGTTTGTAGTTCCATTGGTTGTGGTTTTTGGGTTGGTTTCTTTGTTGGGTCCAAAAACCTCCAACTGGGTTTTCATATCTAATTCTTACCCTTGGCTATGGAGCTCACAGAGCACCAGCCCCTCTCTGAACTTGACCGGTGCTTCAAATTCTTCTTCAGAGTTTCCTCCCCTAAACGATGACGTTTTGGGGTTGAGATCGTCGGTTGTTGTGGTGGATATGCACAGCATAGAAGAAGCTCACTCGGATGACTCTCTTGAAAATCGATCTTCTTCTCCTCCACTCTCCATTGAAGCAGCTGTTCCACCAACACTTGCACAACCCAATGGTACAAGGCAAGACGACTACGCGAATGAGACGCATGTTTCTATAATGAAGGCTGAAGGACAACGAAAAAATACTAATTTAGGGTGGCTGGAGGCCCGCCTTAGAAGAGCTCGAGCTGCCATAAGAGAAGCTAAATTTGGAAATCAAACACAAGATGTGGACTACATTCCAAATGGTCCCATGTATTGGAATGCCAATGCCTTTCAAAGGAGCTACTTGGAGATGGAGAAACGGTTCAAGGTTTTTGTTTATGGAGAAGGGGAACCCCCCTTGTTTCATAACGGCCCTTGCAAGAGCATATATTCAATGGAGGGGAATTTTATCCATGAAATTGAGGTGAATAAGCAATTTCGGACCCGCGACCCTGAGAAAGCACATGTTTATTTTCTTCCTTTCAGCGTGACAATGTTGGTCCGCTTTGTGTATGTGCGTGACTCACATGATTTTGGTCCCATTAGACAAACAGTAAGAGACTATGTCAATATTGTCTCTGGAAAATATCCCTATTGGAACCGAAGCCTTGGAGCTGATCACTTTATGCTTGCTTGCCATGATTGGGGGCCAGAAACTTCAAACTCAGATCCTCATCTTCGAAAAAACTCCATTCGTGTTTTATGCAATGCAAATACCTCAGAAGGGTTCAACCCCTCTAAGGATGTATCCTTTCCAGAAATCAATCTTCAAACTGGTGACACACATGGGTTTCTTGGCGGGCCTTCTCCAAGGCTACGCTCAATCCTAGCTTTCTTTGCCGGAGGGGTTCACGGCCCTATTAGGCCGGTGCTGCTAGAGCATTGGGAGAACAAGGACGAGGATTTACGGGTGCATCAGTACCTTCCAAAGGGTATTTCTTACTATGACATGATGAGACATAGCAAGTTCTGCCTCTGCCCAAGTGGATATGAAGTTGCAAGCCCAAGGGTAGTGGAGGCAATTTACACTGGGTGTGTTCCTGTGCTGATTTCAGACCATTATGTGCCACCATTCAGTGATGTTTTGAACTGGAAGTCTTTCTCTGTGGAGGTTAAAGTGAGTGAAATTCCCAATTTGAAGAACATACTAATGAGCATTTCTACAAAGCAGTACATAAGAATGCAGAGGAGAGTGGTACAAGTAAGGAGGCATTTCGAGGTCAATTCTCCTCCCAAGCGATTTGATGTGTTCCATATGATCCTCCATTCTATATGGCTCAGAAGATTGAATGTCAGAGTGCATGATGATCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Exostosin

Protein Analysis

542

Amino Acids

61.58

Weight (kDa)

8.34

Isoelectric Point (pI)

54.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 585
AccII CGCG 2 cut(s) 422, 759
AciI CCGC 4 cut(s) 496, 757, 814, 1110
AclWI GGATC 2 cut(s) 974, 1564
AcoI YGGCCR 2 cut(s) 3, 63
AcsI RAATTY 4 cut(s) 220, 533, 715, 1437
AcuI CTGAAG 3 cut(s) 33, 213, 474
AdeI CACNNNGTG 1 cut(s) 1344
AfaI GTAC 4 cut(s) 403, 1232, 1484, 1509
AfiI CCNNNNNNNGG 7 cut(s) 138, 585, 606, 955, 1035, 1051, 1240
AflIII ACRYGT 1 cut(s) 775
AgeI ACCGGT 1 cut(s) 209
AjuI GAANNNNNNNTTGG 6 cut(s) 128, 160, 519, 551, 1231, 1263
AloI GAACNNNNNNTCC 2 cut(s) 617, 649
Alw21I GWGCWC 3 cut(s) 179, 188, 511
Alw26I GTCTC 4 cut(s) 422, 864, 892, 1261
AlwI GGATC 2 cut(s) 974, 1564
Ama87I CYCGRG 1 cut(s) 510
AoxI GGCC 8 cut(s) 3, 63, 492, 682, 959, 1112, 1165, 1175
ApeKI GCWGC 4 cut(s) 12, 368, 515, 1183
ApoI RAATTY 4 cut(s) 220, 533, 715, 1437
AsiGI ACCGGT 1 cut(s) 209
Asp700I GAANNNNTTC 2 cut(s) 632, 1409
AsuHPI GGTGA 2 cut(s) 748, 1100
AsuII TTCGAA 1 cut(s) 991
AvaI CYCGRG 1 cut(s) 510
AvaII GGWCC 5 cut(s) 122, 575, 753, 811, 848
BalI TGGCCA 2 cut(s) 5, 65
BanII GRGCYC 2 cut(s) 179, 511
Bbv12I GWGCWC 3 cut(s) 179, 188, 511
BbvI GCAGC 4 cut(s) 24, 380, 502, 1170
BccI CCATC 3 cut(s) 15, 74, 616
BceAI ACGGC 2 cut(s) 697, 1180
BciVI GTATCC 1 cut(s) 1069
BclI TGATCA 2 cut(s) 928, 1618
BcoDI GTCTC 4 cut(s) 422, 864, 892, 1261
BfaI CTAG 2 cut(s) 1139, 1187
BfuI GTATCC 1 cut(s) 1069
BisI GCNGC 4 cut(s) 13, 369, 516, 1184
BlsI GCNGC 4 cut(s) 14, 370, 517, 1185
Bme18I GGWCC 5 cut(s) 122, 575, 753, 811, 848
BmeT110I CYCGRG 1 cut(s) 510
BmiI GGNNCC 7 cut(s) 123, 577, 663, 755, 850, 911, 960
BmrI ACTGGG 2 cut(s) 148, 1350
BmsI GCATC 1 cut(s) 1234
BmuI ACTGGG 2 cut(s) 148, 1350
BpmI CTGGAG 1 cut(s) 509
Bpu14I TTCGAA 1 cut(s) 991
Bsa29I ATCGAT 1 cut(s) 337
BsaBI GATNNNNATC 1 cut(s) 984
BsaJI CCNNGG 4 cut(s) 164, 919, 1121, 1316
BsaWI WCCGGW 1 cut(s) 209
BsaXI ACNNNNNCTCC 2 cut(s) 617, 647
Bsc4I CCNNNNNNNGG 7 cut(s) 138, 585, 606, 955, 1035, 1051, 1240
Bse118I RCCGGY 2 cut(s) 209, 1177
Bse1I ACTGG 4 cut(s) 143, 1090, 1345, 1406
Bse3DI GCAATG 1 cut(s) 1024
Bse8I GATNNNNATC 1 cut(s) 984
BseCI ATCGAT 1 cut(s) 337
BseDI CCNNGG 4 cut(s) 164, 919, 1121, 1316
BseGI GGATG 2 cut(s) 325, 1060
BseJI GATNNNNATC 1 cut(s) 984
BseLI CCNNNNNNNGG 7 cut(s) 138, 585, 606, 955, 1035, 1051, 1240
BseMI GCAATG 1 cut(s) 1024
BseMII CTCAG 4 cut(s) 756, 990, 1044, 1603
BseNI ACTGG 4 cut(s) 143, 1090, 1345, 1406
BseRI GAGGAG 3 cut(s) 339, 1513, 1530
BseXI GCAGC 4 cut(s) 24, 380, 502, 1170
Bsh1236I CGCG 2 cut(s) 422, 759
BshFI GGCC 8 cut(s) 5, 65, 494, 684, 961, 1114, 1167, 1177
BshTI ACCGGT 1 cut(s) 209
BshVI ATCGAT 1 cut(s) 337
BsiHKAI GWGCWC 3 cut(s) 179, 188, 511
BsiHKCI CYCGRG 1 cut(s) 510
BsiSI CCGG 3 cut(s) 210, 1152, 1178
BslFI GGGAC 2 cut(s) 561, 834
BslI CCNNNNNNNGG 7 cut(s) 138, 585, 606, 955, 1035, 1051, 1240
BsmAI GTCTC 4 cut(s) 422, 864, 892, 1261
BsmBI CGTCTC 1 cut(s) 422
BsmFI GGGAC 2 cut(s) 561, 834
BsmI GAATGC 2 cut(s) 595, 1497
BsnI GGCC 8 cut(s) 5, 65, 494, 684, 961, 1114, 1167, 1177
BsoBI CYCGRG 1 cut(s) 510
Bsp119I TTCGAA 1 cut(s) 991
Bsp1286I GDGCHC 3 cut(s) 179, 188, 511
Bsp143I GATC 6 cut(s) 269, 338, 928, 979, 1569, 1618
BspACI CCGC 4 cut(s) 496, 757, 814, 1110
BspANI GGCC 8 cut(s) 5, 65, 494, 684, 961, 1114, 1167, 1177
BspCNI CTCAG 4 cut(s) 757, 989, 1043, 1602
BspDI ATCGAT 1 cut(s) 337
BspFNI CGCG 2 cut(s) 422, 759
BspLI GGNNCC 7 cut(s) 123, 577, 663, 755, 850, 911, 960
BspPI GGATC 2 cut(s) 974, 1564
BspQI GCTCTTC 1 cut(s) 499
BspT104I TTCGAA 1 cut(s) 991
BsrDI GCAATG 1 cut(s) 1024
BsrFI RCCGGY 2 cut(s) 209, 1177
BsrI ACTGG 4 cut(s) 143, 1090, 1345, 1406
BssAI RCCGGY 2 cut(s) 209, 1177
BssECI CCNNGG 4 cut(s) 164, 919, 1121, 1316
BssMI GATC 6 cut(s) 269, 338, 928, 979, 1569, 1618
BssT1I CCWWGG 4 cut(s) 164, 919, 1121, 1316
Bst4CI ACNGT 2 cut(s) 633, 865
Bst6I CTCTTC 1 cut(s) 499
BstAPI GCANNNNNTGC 1 cut(s) 1281
BstBI TTCGAA 1 cut(s) 991
BstC8I GCNNGC 5 cut(s) 496, 942, 946, 1112, 1312
BstDEI CTNAG 6 cut(s) 500, 765, 976, 1030, 1050, 1589
BstENI CCTNNNNNAGG 2 cut(s) 604, 1238
BstF5I GGATG 2 cut(s) 325, 1060
BstFNI CGCG 2 cut(s) 422, 759
BstKTI GATC 6 cut(s) 272, 341, 931, 982, 1572, 1621
BstMAI GTCTC 4 cut(s) 422, 864, 892, 1261
BstMBI GATC 6 cut(s) 269, 338, 928, 979, 1569, 1618
BstMWI GCNNNNNNNGC 6 cut(s) 183, 515, 1148, 1183, 1189, 1281
BstNSI RCATGY 3 cut(s) 42, 437, 779
BstUI CGCG 2 cut(s) 422, 759
BstV1I GCAGC 4 cut(s) 24, 380, 502, 1170
BstX2I RGATCY 1 cut(s) 979
BstYI RGATCY 1 cut(s) 979
Bsu15I ATCGAT 1 cut(s) 337
BsuI GTATCC 1 cut(s) 1069
BsuRI GGCC 8 cut(s) 5, 65, 494, 684, 961, 1114, 1167, 1177
BsuTUI ATCGAT 1 cut(s) 337
BtsCI GGATG 2 cut(s) 325, 1060
BtsIMutI CAGTG 2 cut(s) 1338, 1393
Cac8I GCNNGC 5 cut(s) 496, 942, 946, 1112, 1312
Cfr10I RCCGGY 2 cut(s) 209, 1177
ClaI ATCGAT 1 cut(s) 337
CseI GACGC 1 cut(s) 439
Csp6I GTAC 4 cut(s) 402, 1231, 1483, 1508
CspAI ACCGGT 1 cut(s) 209
CspCI CAANNNNNGTGG 2 cut(s) 1305, 1340
CviQI GTAC 4 cut(s) 402, 1231, 1483, 1508
DdeI CTNAG 6 cut(s) 500, 765, 976, 1030, 1050, 1589
DpnI GATC 6 cut(s) 271, 340, 930, 981, 1571, 1620
DpnII GATC 6 cut(s) 269, 338, 928, 979, 1569, 1618
DraIII CACNNNGTG 1 cut(s) 1344
EaeI YGGCCR 2 cut(s) 3, 63
Eam1104I CTCTTC 1 cut(s) 499
EarI CTCTTC 1 cut(s) 499
Ecl136II GAGCTC 2 cut(s) 177, 509
Eco130I CCWWGG 4 cut(s) 164, 919, 1121, 1316
Eco24I GRGCYC 2 cut(s) 179, 511
Eco47I GGWCC 5 cut(s) 122, 575, 753, 811, 848
Eco53kI GAGCTC 2 cut(s) 177, 509
Eco57I CTGAAG 3 cut(s) 33, 213, 474
Eco88I CYCGRG 1 cut(s) 510
EcoICRI GAGCTC 2 cut(s) 177, 509
EcoNI CCTNNNNNAGG 2 cut(s) 604, 1238
EcoT14I CCWWGG 4 cut(s) 164, 919, 1121, 1316
EcoT22I ATGCAT 1 cut(s) 40
EcoT38I GRGCYC 2 cut(s) 179, 511
ErhI CCWWGG 4 cut(s) 164, 919, 1121, 1316
Esp3I CGTCTC 1 cut(s) 422
FaqI GGGAC 2 cut(s) 561, 834
FauI CCCGC 3 cut(s) 503, 764, 1103
FauNDI CATATG 1 cut(s) 1566
FbaI TGATCA 2 cut(s) 928, 1618
Fnu4HI GCNGC 4 cut(s) 13, 369, 516, 1184
FokI GGATG 2 cut(s) 332, 1067
FriOI GRGCYC 2 cut(s) 179, 511
Fsp4HI GCNGC 4 cut(s) 13, 369, 516, 1184
FspBI CTAG 2 cut(s) 1139, 1187
GluI GCNGC 4 cut(s) 13, 369, 516, 1184
GsuI CTGGAG 1 cut(s) 509
HaeIII GGCC 8 cut(s) 5, 65, 494, 684, 961, 1114, 1167, 1177
HapII CCGG 3 cut(s) 210, 1152, 1178
HgaI GACGC 1 cut(s) 439
HinfI GANTC 2 cut(s) 323, 833
HpaII CCGG 3 cut(s) 210, 1152, 1178
HphI GGTGA 2 cut(s) 748, 1100
Hpy166II GTNNAC 2 cut(s) 559, 1162
Hpy188I TCNGA 9 cut(s) 201, 232, 319, 753, 979, 1033, 1366, 1592, 1607
Hpy188III TCNNGA 3 cut(s) 329, 891, 1067
Hpy8I GTNNAC 2 cut(s) 559, 1162
Hpy99I CGWCG 1 cut(s) 277
HpyAV CCTTC 6 cut(s) 442, 449, 650, 1028, 1125, 1244
HpyCH4III ACNGT 2 cut(s) 633, 865
HpyCH4IV ACGT 1 cut(s) 255
HpyF10VI GCNNNNNNNGC 6 cut(s) 183, 515, 1148, 1183, 1189, 1281
HpyF3I CTNAG 6 cut(s) 500, 765, 976, 1030, 1050, 1589
HpySE526I ACGT 1 cut(s) 255
Ksp22I TGATCA 2 cut(s) 928, 1618
Kzo9I GATC 6 cut(s) 269, 338, 928, 979, 1569, 1618
LguI GCTCTTC 1 cut(s) 499
LmnI GCTCC 3 cut(s) 174, 609, 923
Lsp1109I GCAGC 4 cut(s) 24, 380, 502, 1170
LweI GCATC 1 cut(s) 1234
MaeI CTAG 2 cut(s) 1139, 1187
MaeII ACGT 1 cut(s) 255
MaeIII GTNAC 3 cut(s) 799, 830, 1088
MalI GATC 6 cut(s) 271, 340, 930, 981, 1571, 1620
MboI GATC 6 cut(s) 269, 338, 928, 979, 1569, 1618
MflI RGATCY 1 cut(s) 979
MhlI GDGCHC 3 cut(s) 179, 188, 511
MlsI TGGCCA 2 cut(s) 5, 65
MluNI TGGCCA 2 cut(s) 5, 65
MlyI GAGTC 2 cut(s) 317, 827
MmeI TCCRAC 1 cut(s) 159
Mox20I TGGCCA 2 cut(s) 5, 65
Mph1103I ATGCAT 1 cut(s) 40
MroXI GAANNNNTTC 2 cut(s) 632, 1409
MscI TGGCCA 2 cut(s) 5, 65
MseI TTAA 1 cut(s) 1425
MslI CAYNNNNRTG 3 cut(s) 318, 1460, 1490
Msp20I TGGCCA 2 cut(s) 5, 65
MspA1I CMGCKG 1 cut(s) 371
MspI CCGG 3 cut(s) 210, 1152, 1178
Mva1269I GAATGC 2 cut(s) 595, 1497
MvnI CGCG 2 cut(s) 422, 759
MwoI GCNNNNNNNGC 6 cut(s) 183, 515, 1148, 1183, 1189, 1281
NdeI CATATG 1 cut(s) 1566
NdeII GATC 6 cut(s) 269, 338, 928, 979, 1569, 1618
NlaIV GGNNCC 7 cut(s) 123, 577, 663, 755, 850, 911, 960
NmuCI GTSAC 3 cut(s) 799, 830, 1088
NsiI ATGCAT 1 cut(s) 40
NspI RCATGY 3 cut(s) 42, 437, 779
NspV TTCGAA 1 cut(s) 991
PaeR7I CTCGAG 1 cut(s) 510
PciI ACATGT 1 cut(s) 775
PciSI GCTCTTC 1 cut(s) 499
PctI GAATGC 2 cut(s) 595, 1497
PdmI GAANNNNTTC 2 cut(s) 632, 1409
PflFI GACNNNGTC 1 cut(s) 875
PflMI CCANNNNNTGG 1 cut(s) 585
PinAI ACCGGT 1 cut(s) 209
PkrI GCNGC 4 cut(s) 14, 370, 517, 1185
PleI GAGTC 2 cut(s) 317, 827
PpsI GAGTC 2 cut(s) 317, 827
PscI ACATGT 1 cut(s) 775
Psp124BI GAGCTC 2 cut(s) 179, 511
PspN4I GGNNCC 7 cut(s) 123, 577, 663, 755, 850, 911, 960
PspXI VCTCGAGB 1 cut(s) 510
PsuI RGATCY 1 cut(s) 979
PsyI GACNNNGTC 1 cut(s) 875
PvuII CAGCTG 1 cut(s) 371
RsaI GTAC 4 cut(s) 403, 1232, 1484, 1509
RsaNI GTAC 4 cut(s) 402, 1231, 1483, 1508
RseI CAYNNNNRTG 3 cut(s) 318, 1460, 1490
SacI GAGCTC 2 cut(s) 179, 511
SapI GCTCTTC 1 cut(s) 499
SaqAI TTAA 1 cut(s) 1425
SatI GCNGC 4 cut(s) 13, 369, 516, 1184
Sau3AI GATC 6 cut(s) 269, 338, 928, 979, 1569, 1618
SchI GAGTC 2 cut(s) 317, 827
SduI GDGCHC 3 cut(s) 179, 188, 511
SfaNI GCATC 1 cut(s) 1234
Sfr274I CTCGAG 1 cut(s) 510
SfuI TTCGAA 1 cut(s) 991
SinI GGWCC 5 cut(s) 122, 575, 753, 811, 848
SlaI CTCGAG 1 cut(s) 510
SmiMI CAYNNNNRTG 3 cut(s) 318, 1460, 1490
SmlI CTYRAG 1 cut(s) 510
SmoI CTYRAG 1 cut(s) 510
SsiI CCGC 4 cut(s) 496, 757, 814, 1110
SspI AATATT 1 cut(s) 883
SspMI CTAG 2 cut(s) 1139, 1187
SstI GAGCTC 2 cut(s) 179, 511
StyI CCWWGG 4 cut(s) 164, 919, 1121, 1316
TaaI ACNGT 2 cut(s) 633, 865
TaiI ACGT 1 cut(s) 258
TaqI TCGA 4 cut(s) 337, 511, 991, 1527
TatI WGTACW 1 cut(s) 1482
Tru1I TTAA 1 cut(s) 1425
Tru9I TTAA 1 cut(s) 1425
TscAI CASTG 2 cut(s) 1345, 1393
TseFI GTSAC 3 cut(s) 799, 830, 1088
TseI GCWGC 4 cut(s) 12, 368, 515, 1183
Tsp45I GTSAC 3 cut(s) 799, 830, 1088
TspDTI ATGAA 6 cut(s) 45, 136, 461, 665, 741, 1317
TspRI CASTG 2 cut(s) 1345, 1393
Tth111I GACNNNGTC 1 cut(s) 875
Van91I CCANNNNNTGG 1 cut(s) 585
VpaK11BI GGWCC 5 cut(s) 122, 575, 753, 811, 848
XagI CCTNNNNNAGG 2 cut(s) 604, 1238
XapI RAATTY 4 cut(s) 220, 533, 715, 1437
XceI RCATGY 3 cut(s) 42, 437, 779
XhoI CTCGAG 1 cut(s) 510
XmnI GAANNNNTTC 2 cut(s) 632, 1409
XspI CTAG 2 cut(s) 1139, 1187
Zsp2I ATGCAT 1 cut(s) 40
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.