Prupe.6G186700_v2.0.a1

Oxidation resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0001099
Physical Location & Seq
Forward (+)
19505363 .. 19509461
4099 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G186700.2

Sequence Viewer

Length: 1119 bp
ATGGGTAGGCCACGGTCTTTTCGGAGCAAGGCAGTCCACTTTGTATCTGATCTCACCACTGTCTTGCTCAATCCCATTTCTGACAAACCCTCCAAAACCTCTTCTCCTCCTCCTCATGCTGAAGATGAGGATGAGTCCAAAGGAAGTCAAAATGAATCAAGTAGTGAAGAGAGTCCCGTTAATGTAGTTGATGGGCCTGACACTTCATCCTTTAGTGCATTCCTCTACTCTCTATTGTCATCAGAGTCTGAAGATACTAATACAAATGCAGATGAGAAAATTGATAATGAAATGGATAGGAGTAACCCATCATCTGATTCTGCAATCAAAGGAAATGGTGGAAAGAGAAGTTTACTTTCTAAGGGGAAACAGTCACTTAGTAAAGTTATCTATCAAGCTGCGAGATTTGGTGGATATCGGAGTCAAGAACGCAAGGGTAACCCTGACGTGAAAGTTGATGATAGGAATGACTTGGAATTTACTGGAGTTGAGATGAGGCATATGCAGAAAGCCGAAAAGCCTATGGCTTTGGTTGATCTCCCAGACATCTCTGAACCTTCTTTACTTCTTACAGAAATAACTAGAACTGCTCTTTATGCTTCAATGCCAGCACTTGTTCAAGGACGGAAATGGTTGTTACTGTATAGTACATGGAGGCATGGCATATCATTGTCAAGCCTATACAGAAGAAGCGTGCTTTGGCCTGGCCCCAGTTTGCTGGTTGTTGGAGACCGTAAAGGTGCAGTTTTTGGTGGCTTGGTGGAGGCCCCTCTAAGACCAACCAACAAGAAGTATCAGGGAACAAATGATACATTTGTTTTCACAACTACACCTGGAAATCCTGTTATATTTCGCCCTACAGGTGCAAATCGCTATTTCACATTGTGCTCCACTGACTTTTTAGCAATTGGTGGTGGTGGTCATTTTGCACTCTATTTGGACAGTGATCTATTGAGTGGATCAAGTTCATTCTCGGAAACCTATGGGAATCCTTGTCTTGCACACTCAGAAGACTTTGAGGTGAAAGAAGTTGAGCTGTGGGGCTTTGTATATGCTACTAAGTATGAGGAAGTACTTGCTCTAAGCCGTATGGAGGCACCTGGGATTTGCCGATGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TLD

Protein Analysis

373

Amino Acids

40.94

Weight (kDa)

5.54

Isoelectric Point (pI)

43.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1096
AclWI GGATC 1 cut(s) 967
AcsI RAATTY 1 cut(s) 476
AcuI CTGAAG 2 cut(s) 141, 270
AdeI CACNNNGTG 1 cut(s) 885
AfaI GTAC 2 cut(s) 649, 1074
AfiI CCNNNNNNNGG 1 cut(s) 1093
AgsI TTSAA 2 cut(s) 603, 620
AjiI CACGTC 1 cut(s) 448
AjnI CCWGG 3 cut(s) 703, 832, 1099
AjuI GAANNNNNNNTTGG 2 cut(s) 682, 714
AluBI AGCT 2 cut(s) 398, 1036
AluI AGCT 2 cut(s) 398, 1036
Alw21I GWGCWC 1 cut(s) 890
Alw26I GTCTC 1 cut(s) 723
AlwI GGATC 1 cut(s) 967
AlwNI CAGNNNCTG 1 cut(s) 248
AoxI GGCC 5 cut(s) 8, 194, 701, 706, 765
ApeKI GCWGC 1 cut(s) 398
ApoI RAATTY 1 cut(s) 476
AspS9I GGNCC 3 cut(s) 194, 707, 766
AsuHPI GGTGA 2 cut(s) 46, 1033
BaeI ACNNNNGTAYC 2 cut(s) 801, 834
BanI GGYRCC 1 cut(s) 1096
BbsI GAAGAC 1 cut(s) 1017
Bbv12I GWGCWC 1 cut(s) 890
BbvI GCAGC 1 cut(s) 385
BccI CCATC 3 cut(s) 185, 316, 1107
BceAI ACGGC 1 cut(s) 1071
BciT130I CCWGG 3 cut(s) 705, 834, 1101
BcoDI GTCTC 1 cut(s) 723
BfaI CTAG 1 cut(s) 582
BfmI CTRYAG 1 cut(s) 858
BisI GCNGC 1 cut(s) 399
BlsI GCNGC 1 cut(s) 400
BmcAI AGTACT 1 cut(s) 1074
Bme1390I CCNGG 3 cut(s) 705, 834, 1101
BmgBI CACGTC 1 cut(s) 448
BmgT120I GGNCC 3 cut(s) 194, 707, 766
BmiI GGNNCC 3 cut(s) 709, 768, 1098
BmrFI CCNGG 3 cut(s) 705, 834, 1101
BmrI ACTGGG 1 cut(s) 705
BmuI ACTGGG 1 cut(s) 705
BpiI GAAGAC 1 cut(s) 1017
BpmI CTGGAG 1 cut(s) 504
BsaI GGTCTC 1 cut(s) 723
BsaJI CCNNGG 2 cut(s) 11, 1100
BsaXI ACNNNNNCTCC 4 cut(s) 74, 88, 104, 118
Bsc4I CCNNNNNNNGG 1 cut(s) 1093
Bse1I ACTGG 2 cut(s) 487, 711
BseBI CCWGG 3 cut(s) 705, 834, 1101
BseDI CCNNGG 2 cut(s) 11, 1100
BseGI GGATG 2 cut(s) 136, 206
BseLI CCNNNNNNNGG 1 cut(s) 1093
BseMII CTCAG 1 cut(s) 1020
BseNI ACTGG 2 cut(s) 487, 711
BseRI GAGGAG 3 cut(s) 96, 99, 102
BseXI GCAGC 1 cut(s) 385
BsgI GTGCAG 1 cut(s) 762
BshFI GGCC 5 cut(s) 10, 196, 703, 708, 767
BshNI GGYRCC 1 cut(s) 1096
BsiHKAI GWGCWC 1 cut(s) 890
BslFI GGGAC 1 cut(s) 159
BslI CCNNNNNNNGG 1 cut(s) 1093
BsmAI GTCTC 1 cut(s) 723
BsmFI GGGAC 1 cut(s) 159
BsmI GAATGC 1 cut(s) 218
BsnI GGCC 5 cut(s) 10, 196, 703, 708, 767
Bso31I GGTCTC 1 cut(s) 723
Bsp1286I GDGCHC 1 cut(s) 890
Bsp143I GATC 4 cut(s) 49, 535, 946, 959
BspANI GGCC 5 cut(s) 10, 196, 703, 708, 767
BspCNI CTCAG 1 cut(s) 1019
BspLI GGNNCC 3 cut(s) 709, 768, 1098
BspPI GGATC 1 cut(s) 967
BspT107I GGYRCC 1 cut(s) 1096
BspTNI GGTCTC 1 cut(s) 723
BsrI ACTGG 2 cut(s) 487, 711
BssECI CCNNGG 2 cut(s) 11, 1100
BssMI GATC 4 cut(s) 49, 535, 946, 959
Bst2UI CCWGG 3 cut(s) 705, 834, 1101
Bst4CI ACNGT 6 cut(s) 15, 61, 372, 642, 734, 944
Bst6I CTCTTC 2 cut(s) 106, 162
BstC8I GCNNGC 2 cut(s) 609, 695
BstDEI CTNAG 6 cut(s) 360, 377, 773, 1006, 1059, 1082
BstDSI CCRYGG 1 cut(s) 11
BstEII GGTNACC 1 cut(s) 437
BstF5I GGATG 2 cut(s) 136, 206
BstKTI GATC 4 cut(s) 52, 538, 949, 962
BstMAI GTCTC 1 cut(s) 723
BstMBI GATC 4 cut(s) 49, 535, 946, 959
BstMWI GCNNNNNNNGC 1 cut(s) 596
BstNI CCWGG 3 cut(s) 705, 834, 1101
BstPI GGTNACC 1 cut(s) 437
BstSCI CCNGG 3 cut(s) 703, 832, 1099
BstSFI CTRYAG 1 cut(s) 858
BstV1I GCAGC 1 cut(s) 385
BstV2I GAAGAC 1 cut(s) 1017
BstXI CCANNNNNNTGG 1 cut(s) 718
BsuRI GGCC 5 cut(s) 10, 196, 703, 708, 767
BtgI CCRYGG 1 cut(s) 11
BtrI CACGTC 1 cut(s) 448
BtsCI GGATG 2 cut(s) 136, 206
BtsIMutI CAGTG 3 cut(s) 57, 891, 949
Cac8I GCNNGC 2 cut(s) 609, 695
CaiI CAGNNNCTG 1 cut(s) 248
Cfr13I GGNCC 3 cut(s) 194, 707, 766
Csp6I GTAC 2 cut(s) 648, 1073
CviAII CATG 3 cut(s) 116, 651, 659
CviQI GTAC 2 cut(s) 648, 1073
DdeI CTNAG 6 cut(s) 360, 377, 773, 1006, 1059, 1082
DpnI GATC 4 cut(s) 51, 537, 948, 961
DpnII GATC 4 cut(s) 49, 535, 946, 959
DraIII CACNNNGTG 1 cut(s) 885
Eam1104I CTCTTC 2 cut(s) 106, 162
EarI CTCTTC 2 cut(s) 106, 162
Eco31I GGTCTC 1 cut(s) 723
Eco32I GATATC 1 cut(s) 416
Eco57I CTGAAG 2 cut(s) 141, 270
Eco91I GGTNACC 1 cut(s) 437
EcoO109I RGGNCCY 1 cut(s) 766
EcoO65I GGTNACC 1 cut(s) 437
EcoRII CCWGG 3 cut(s) 703, 832, 1099
EcoRV GATATC 1 cut(s) 416
FaeI CATG 3 cut(s) 119, 654, 662
FaqI GGGAC 1 cut(s) 159
FatI CATG 3 cut(s) 115, 650, 658
FauNDI CATATG 1 cut(s) 501
Fnu4HI GCNGC 1 cut(s) 399
FokI GGATG 2 cut(s) 143, 193
Fsp4HI GCNGC 1 cut(s) 399
FspBI CTAG 1 cut(s) 582
GluI GCNGC 1 cut(s) 399
GsuI CTGGAG 1 cut(s) 504
HaeIII GGCC 5 cut(s) 10, 196, 703, 708, 767
Hin1II CATG 3 cut(s) 119, 654, 662
HinfI GANTC 7 cut(s) 134, 155, 172, 245, 317, 421, 988
HphI GGTGA 2 cut(s) 46, 1033
Hpy166II GTNNAC 2 cut(s) 37, 353
Hpy188III TCNNGA 1 cut(s) 425
Hpy8I GTNNAC 2 cut(s) 37, 353
HpyAV CCTTC 1 cut(s) 567
HpyCH4III ACNGT 6 cut(s) 15, 61, 372, 642, 734, 944
HpyCH4IV ACGT 1 cut(s) 447
HpyCH4V TGCA 8 cut(s) 218, 269, 323, 505, 743, 866, 929, 1001
HpyF10VI GCNNNNNNNGC 1 cut(s) 596
HpyF3I CTNAG 6 cut(s) 360, 377, 773, 1006, 1059, 1082
HpySE526I ACGT 1 cut(s) 447
Hsp92II CATG 3 cut(s) 119, 654, 662
Kzo9I GATC 4 cut(s) 49, 535, 946, 959
LmnI GCTCC 2 cut(s) 24, 893
Lsp1109I GCAGC 1 cut(s) 385
MaeI CTAG 1 cut(s) 582
MaeII ACGT 1 cut(s) 447
MaeIII GTNAC 4 cut(s) 302, 372, 437, 636
MalI GATC 4 cut(s) 51, 537, 948, 961
MboI GATC 4 cut(s) 49, 535, 946, 959
MboII GAAGA 6 cut(s) 93, 134, 179, 263, 699, 1022
MfeI CAATTG 1 cut(s) 906
MhlI GDGCHC 1 cut(s) 890
MluCI AATT 3 cut(s) 279, 476, 906
MlyI GAGTC 4 cut(s) 143, 181, 254, 430
MmeI TCCRAC 1 cut(s) 706
MseI TTAA 1 cut(s) 180
MspR9I CCNGG 3 cut(s) 705, 834, 1101
MunI CAATTG 1 cut(s) 906
Mva1269I GAATGC 1 cut(s) 218
MvaI CCWGG 3 cut(s) 705, 834, 1101
MwoI GCNNNNNNNGC 1 cut(s) 596
NdeI CATATG 1 cut(s) 501
NdeII GATC 4 cut(s) 49, 535, 946, 959
NlaIII CATG 3 cut(s) 119, 654, 662
NlaIV GGNNCC 3 cut(s) 709, 768, 1098
NmuCI GTSAC 1 cut(s) 372
PctI GAATGC 1 cut(s) 218
PfeI GAWTC 3 cut(s) 155, 317, 988
PkrI GCNGC 1 cut(s) 400
PleI GAGTC 4 cut(s) 142, 180, 253, 429
PpsI GAGTC 4 cut(s) 142, 180, 253, 429
Psp6I CCWGG 3 cut(s) 703, 832, 1099
PspEI GGTNACC 1 cut(s) 437
PspGI CCWGG 3 cut(s) 703, 832, 1099
PspN4I GGNNCC 3 cut(s) 709, 768, 1098
PspPI GGNCC 3 cut(s) 194, 707, 766
PsrI GAACNNNNNNTAC 4 cut(s) 546, 578, 793, 825
PstNI CAGNNNCTG 1 cut(s) 248
RsaI GTAC 2 cut(s) 649, 1074
RsaNI GTAC 2 cut(s) 648, 1073
SaqAI TTAA 1 cut(s) 180
SatI GCNGC 1 cut(s) 399
Sau3AI GATC 4 cut(s) 49, 535, 946, 959
Sau96I GGNCC 3 cut(s) 194, 707, 766
ScaI AGTACT 1 cut(s) 1074
SchI GAGTC 4 cut(s) 143, 181, 254, 430
ScrFI CCNGG 3 cut(s) 705, 834, 1101
SduI GDGCHC 1 cut(s) 890
SfcI CTRYAG 1 cut(s) 858
Sse9I AATT 3 cut(s) 279, 476, 906
SspMI CTAG 1 cut(s) 582
StyD4I CCNGG 3 cut(s) 703, 832, 1099
TaaI ACNGT 6 cut(s) 15, 61, 372, 642, 734, 944
TaiI ACGT 1 cut(s) 450
TasI AATT 3 cut(s) 279, 476, 906
TatI WGTACW 2 cut(s) 647, 1072
TfiI GAWTC 3 cut(s) 155, 317, 988
Tru1I TTAA 1 cut(s) 180
Tru9I TTAA 1 cut(s) 180
TscAI CASTG 3 cut(s) 64, 898, 949
TseFI GTSAC 1 cut(s) 372
TseI GCWGC 1 cut(s) 398
Tsp45I GTSAC 1 cut(s) 372
TspDTI ATGAA 4 cut(s) 168, 195, 303, 957
TspGWI ACGGA 1 cut(s) 640
TspRI CASTG 3 cut(s) 64, 898, 949
XapI RAATTY 1 cut(s) 476
XspI CTAG 1 cut(s) 582
ZrmI AGTACT 1 cut(s) 1074
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.