Rh2CG250600

Oxidation resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0001099
Physical Location & Seq
Reverse (-)
26576128 .. 26598200
22073 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG250600.1

Sequence Viewer

Length: 603 bp
ATGGCCTCTATGCTTCGCCTTCTATCAGGTAATACATCTTCTGTTCAGGAAGATGTGGATGGGTCCAGAGGAAGTCAAAATGGAACAATGAGTGAAGAGAGTCCAGCTAATCCAGTTGATGGGCCTGACACTTCTTCATTTACTGCATTTCTCTACTCACTGTTATCGTCATCCGGGTCGGGAGATAAGAGCAAAAGTTCGGATGAACAGGTTGATGACCAAATGGATAAGAGCAACTCATTATCTGATTCTGCAGTGAAAGCAAACAGTGGGAAGAGAAGCTTATTTTCCAAGGGGGAACACACGCTTAGTAAGGCTATGTACCAGGCTGCAAGATTTGGTTGGTATCGGAGTCAAGAGCGGAAGGGTAACTTTGACGTGAAAGGTGATGATGGGAATGATTCTGAGTTTACTAGAGTTGAGATGAGGCATATGCATAAAGCACAGAAGCCTGTGGCTTTGGTTCATCTACCAGACGTCTCCGTACCTTCTTTACTTAATGAGAAAAATAGAATTGCTCTTTACAGTTCACTCCCAGCGCTAGTTCAGGGAAGTCAATGGTTGTTACTATATAGGTGGGGAAACTTGGAGTTTCATAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TLD

Protein Analysis

200

Amino Acids

21.96

Weight (kDa)

5.95

Isoelectric Point (pI)

44.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 480
AccB7I CCANNNNNTGG 1 cut(s) 119
AccBSI CCGCTC 1 cut(s) 361
AciI CCGC 1 cut(s) 361
AcyI GRCGYC 1 cut(s) 477
AfaI GTAC 2 cut(s) 323, 486
AfeI AGCGCT 1 cut(s) 540
AfiI CCNNNNNNNGG 1 cut(s) 119
AjiI CACGTC 1 cut(s) 379
AjnI CCWGG 1 cut(s) 324
AluBI AGCT 2 cut(s) 107, 282
AluI AGCT 2 cut(s) 107, 282
Alw26I GTCTC 1 cut(s) 484
Aor51HI AGCGCT 1 cut(s) 540
AoxI GGCC 2 cut(s) 3, 122
ApeKI GCWGC 1 cut(s) 329
AspLEI GCGC 1 cut(s) 541
AspS9I GGNCC 2 cut(s) 63, 122
AsuC2I CCSGG 1 cut(s) 175
AsuHPI GGTGA 1 cut(s) 398
AvaII GGWCC 1 cut(s) 63
BarI GAAGNNNNNNTAC 2 cut(s) 22, 54
BbvI GCAGC 1 cut(s) 316
BccI CCATC 3 cut(s) 53, 113, 386
BciT130I CCWGG 1 cut(s) 326
BcnI CCSGG 1 cut(s) 175
BcoDI GTCTC 1 cut(s) 484
BfaI CTAG 2 cut(s) 414, 542
BfmI CTRYAG 1 cut(s) 252
BfoI RGCGCY 1 cut(s) 542
BisI GCNGC 1 cut(s) 330
BlsI GCNGC 1 cut(s) 331
Bme1390I CCNGG 2 cut(s) 175, 326
Bme18I GGWCC 1 cut(s) 63
BmgBI CACGTC 1 cut(s) 379
BmgT120I GGNCC 2 cut(s) 63, 122
BmiI GGNNCC 1 cut(s) 64
BmrFI CCNGG 2 cut(s) 175, 326
BpuMI CCSGG 1 cut(s) 175
BsaHI GRCGYC 1 cut(s) 477
BsaJI CCNNGG 1 cut(s) 291
Bsc4I CCNNNNNNNGG 1 cut(s) 119
Bse1I ACTGG 1 cut(s) 113
BseBI CCWGG 1 cut(s) 326
BseDI CCNNGG 1 cut(s) 291
BseGI GGATG 3 cut(s) 64, 170, 208
BseLI CCNNNNNNNGG 1 cut(s) 119
BseMII CTCAG 1 cut(s) 396
BseNI ACTGG 1 cut(s) 113
BseXI GCAGC 1 cut(s) 316
BseYI CCCAGC 1 cut(s) 535
BshFI GGCC 2 cut(s) 5, 124
BsiSI CCGG 1 cut(s) 174
BslI CCNNNNNNNGG 1 cut(s) 119
BsmAI GTCTC 1 cut(s) 484
BsmBI CGTCTC 1 cut(s) 484
BsnI GGCC 2 cut(s) 5, 124
BspACI CCGC 1 cut(s) 361
BspANI GGCC 2 cut(s) 5, 124
BspCNI CTCAG 1 cut(s) 397
BspLI GGNNCC 1 cut(s) 64
BspMAI CTGCAG 1 cut(s) 256
BsrBI CCGCTC 1 cut(s) 361
BsrI ACTGG 1 cut(s) 113
BssECI CCNNGG 1 cut(s) 291
BssNI GRCGYC 1 cut(s) 477
BssT1I CCWWGG 1 cut(s) 291
Bst2UI CCWGG 1 cut(s) 326
Bst4CI ACNGT 3 cut(s) 162, 269, 527
Bst6I CTCTTC 2 cut(s) 90, 269
BstACI GRCGYC 1 cut(s) 477
BstDEI CTNAG 2 cut(s) 308, 405
BstF5I GGATG 3 cut(s) 64, 170, 208
BstH2I RGCGCY 1 cut(s) 542
BstHHI GCGC 1 cut(s) 541
BstMAI GTCTC 1 cut(s) 484
BstMWI GCNNNNNNNGC 1 cut(s) 260
BstNI CCWGG 1 cut(s) 326
BstSCI CCNGG 2 cut(s) 173, 324
BstSFI CTRYAG 1 cut(s) 252
BstV1I GCAGC 1 cut(s) 316
BsuRI GGCC 2 cut(s) 5, 124
BtrI CACGTC 1 cut(s) 379
BtsCI GGATG 3 cut(s) 64, 170, 208
BtsI GCAGTG 1 cut(s) 261
BtsIMutI CAGTG 3 cut(s) 158, 261, 274
CfoI GCGC 1 cut(s) 541
Cfr13I GGNCC 2 cut(s) 63, 122
Csp6I GTAC 2 cut(s) 322, 485
CviJI RGCY 8 cut(s) 5, 107, 124, 282, 317, 329, 451, 458
CviKI_1 RGCY 8 cut(s) 5, 107, 124, 282, 317, 329, 451, 458
CviQI GTAC 2 cut(s) 322, 485
DdeI CTNAG 2 cut(s) 308, 405
Eam1104I CTCTTC 2 cut(s) 90, 269
EarI CTCTTC 2 cut(s) 90, 269
Eco130I CCWWGG 1 cut(s) 291
Eco47I GGWCC 1 cut(s) 63
Eco47III AGCGCT 1 cut(s) 540
EcoRII CCWGG 1 cut(s) 324
EcoT14I CCWWGG 1 cut(s) 291
EcoT22I ATGCAT 1 cut(s) 438
ErhI CCWWGG 1 cut(s) 291
Esp3I CGTCTC 1 cut(s) 484
FaiI YATR 8 cut(s) 11, 320, 432, 434, 438, 571, 573, 597
FalI AAGNNNNNCTT 4 cut(s) 266, 298, 356, 388
FauNDI CATATG 1 cut(s) 432
Fnu4HI GCNGC 1 cut(s) 330
FokI GGATG 3 cut(s) 71, 157, 215
Fsp4HI GCNGC 1 cut(s) 330
FspBI CTAG 2 cut(s) 414, 542
GlaI GCGC 1 cut(s) 540
GluI GCNGC 1 cut(s) 330
GsaI CCCAGC 1 cut(s) 539
HaeII RGCGCY 1 cut(s) 542
HaeIII GGCC 2 cut(s) 5, 124
HapII CCGG 1 cut(s) 174
HhaI GCGC 1 cut(s) 541
Hin1I GRCGYC 1 cut(s) 477
Hin6I GCGC 1 cut(s) 539
HinP1I GCGC 1 cut(s) 539
HindIII AAGCTT 1 cut(s) 280
HinfI GANTC 4 cut(s) 100, 248, 352, 401
HpaII CCGG 1 cut(s) 174
HphI GGTGA 1 cut(s) 398
Hpy166II GTNNAC 2 cut(s) 411, 530
Hpy188I TCNGA 4 cut(s) 202, 247, 351, 406
Hpy188III TCNNGA 4 cut(s) 47, 66, 180, 356
Hpy8I GTNNAC 2 cut(s) 411, 530
HpyAV CCTTC 3 cut(s) 29, 358, 498
HpyCH4III ACNGT 3 cut(s) 162, 269, 527
HpyCH4IV ACGT 2 cut(s) 378, 477
HpyCH4V TGCA 4 cut(s) 146, 254, 332, 436
HpyF10VI GCNNNNNNNGC 1 cut(s) 260
HpyF3I CTNAG 2 cut(s) 308, 405
HpySE526I ACGT 2 cut(s) 378, 477
Hsp92I GRCGYC 1 cut(s) 477
HspAI GCGC 1 cut(s) 539
Lsp1109I GCAGC 1 cut(s) 316
MaeI CTAG 2 cut(s) 414, 542
MaeII ACGT 2 cut(s) 378, 477
MaeIII GTNAC 2 cut(s) 368, 564
MbiI CCGCTC 1 cut(s) 361
MboII GAAGA 5 cut(s) 30, 62, 107, 126, 286
MluCI AATT 1 cut(s) 513
MlyI GAGTC 2 cut(s) 109, 361
MnlI CCTC 3 cut(s) 16, 62, 420
Mph1103I ATGCAT 1 cut(s) 438
MseI TTAA 1 cut(s) 498
MspI CCGG 1 cut(s) 174
MspR9I CCNGG 2 cut(s) 175, 326
MvaI CCWGG 1 cut(s) 326
MwoI GCNNNNNNNGC 1 cut(s) 260
NciI CCSGG 1 cut(s) 175
NdeI CATATG 1 cut(s) 432
NlaIV GGNNCC 1 cut(s) 64
NsiI ATGCAT 1 cut(s) 438
PfeI GAWTC 2 cut(s) 248, 401
PflMI CCANNNNNTGG 1 cut(s) 119
PkrI GCNGC 1 cut(s) 331
PleI GAGTC 2 cut(s) 108, 360
PpsI GAGTC 2 cut(s) 108, 360
Psp6I CCWGG 1 cut(s) 324
PspFI CCCAGC 1 cut(s) 535
PspGI CCWGG 1 cut(s) 324
PspN4I GGNNCC 1 cut(s) 64
PspPI GGNCC 2 cut(s) 63, 122
PstI CTGCAG 1 cut(s) 256
RsaI GTAC 2 cut(s) 323, 486
RsaNI GTAC 2 cut(s) 322, 485
SaqAI TTAA 1 cut(s) 498
SatI GCNGC 1 cut(s) 330
Sau96I GGNCC 2 cut(s) 63, 122
SchI GAGTC 2 cut(s) 109, 361
ScrFI CCNGG 2 cut(s) 175, 326
SetI ASST 9 cut(s) 31, 109, 213, 284, 381, 388, 480, 490, 578
SfcI CTRYAG 1 cut(s) 252
SinI GGWCC 1 cut(s) 63
Sse9I AATT 1 cut(s) 513
SsiI CCGC 1 cut(s) 361
SspMI CTAG 2 cut(s) 414, 542
StyD4I CCNGG 2 cut(s) 173, 324
StyI CCWWGG 1 cut(s) 291
TaaI ACNGT 3 cut(s) 162, 269, 527
TaiI ACGT 2 cut(s) 381, 480
TasI AATT 1 cut(s) 513
TfiI GAWTC 2 cut(s) 248, 401
Tru1I TTAA 1 cut(s) 498
Tru9I TTAA 1 cut(s) 498
TscAI CASTG 3 cut(s) 165, 261, 274
TseI GCWGC 1 cut(s) 329
TspDTI ATGAA 4 cut(s) 126, 219, 455, 584
TspGWI ACGGA 1 cut(s) 472
TspRI CASTG 3 cut(s) 165, 261, 274
Van91I CCANNNNNTGG 1 cut(s) 119
VpaK11BI GGWCC 1 cut(s) 63
XspI CTAG 2 cut(s) 414, 542
ZraI GACGTC 1 cut(s) 478
Zsp2I ATGCAT 1 cut(s) 438
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.