Oxidation resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_1 | PF00078 | 493 - 748 | 1.1e-25 | Reverse transcriptase (RNA-dependent DNA polymerase) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2568 |
| Acc65I | GGTACC | 1 cut(s) | 1427 |
| AccB1I | GGYRCC | 1 cut(s) | 1427 |
| AccI | GTMKAC | 1 cut(s) | 527 |
| AccII | CGCG | 1 cut(s) | 1251 |
| AciI | CCGC | 6 cut(s) | 1124, 1214, 1732, 1958, 2209, 2500 |
| AclWI | GGATC | 4 cut(s) | 630, 1469, 1799, 1889 |
| AcoI | YGGCCR | 1 cut(s) | 216 |
| AcsI | RAATTY | 5 cut(s) | 1075, 2088, 2331, 2355, 2490 |
| AcuI | CTGAAG | 2 cut(s) | 812, 1577 |
| AfaI | GTAC | 4 cut(s) | 786, 1429, 2053, 2234 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 264, 725, 764, 1062, 1741, 1877, 2215, 2592, 2706 |
| AflII | CTTAAG | 1 cut(s) | 1013 |
| AflIII | ACRYGT | 1 cut(s) | 193 |
| AgsI | TTSAA | 7 cut(s) | 385, 875, 1206, 1964, 2083, 2180, 2753 |
| AjnI | CCWGG | 6 cut(s) | 123, 1321, 1609, 1752, 2169, 2630 |
| Alw21I | GWGCWC | 1 cut(s) | 577 |
| Alw26I | GTCTC | 6 cut(s) | 301, 399, 982, 1181, 2593, 2625 |
| AlwI | GGATC | 4 cut(s) | 630, 1469, 1799, 1889 |
| Ama87I | CYCGRG | 1 cut(s) | 1875 |
| AoxI | GGCC | 7 cut(s) | 216, 418, 750, 1612, 1933, 1981, 2367 |
| ApeKI | GCWGC | 6 cut(s) | 293, 431, 434, 1261, 1487, 2737 |
| ApoI | RAATTY | 5 cut(s) | 1075, 2088, 2331, 2355, 2490 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 476, 508 |
| AseI | ATTAAT | 1 cut(s) | 1470 |
| Asp718I | GGTACC | 1 cut(s) | 1427 |
| AspLEI | GCGC | 3 cut(s) | 900, 1253, 2005 |
| AspS9I | GGNCC | 3 cut(s) | 750, 1325, 1933 |
| AsuHPI | GGTGA | 5 cut(s) | 592, 1859, 1896, 1904, 2480 |
| AsuII | TTCGAA | 2 cut(s) | 454, 865 |
| AvaI | CYCGRG | 1 cut(s) | 1875 |
| AvaII | GGWCC | 1 cut(s) | 1325 |
| AxyI | CCTNAGG | 1 cut(s) | 1479 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 180, 213 |
| BanI | GGYRCC | 1 cut(s) | 1427 |
| BanII | GRGCYC | 1 cut(s) | 577 |
| BauI | CACGAG | 2 cut(s) | 106, 368 |
| BbsI | GAAGAC | 1 cut(s) | 1159 |
| Bbv12I | GWGCWC | 1 cut(s) | 577 |
| BbvCI | CCTCAGC | 1 cut(s) | 1929 |
| BbvI | GCAGC | 6 cut(s) | 280, 421, 443, 1273, 1499, 2724 |
| BciT130I | CCWGG | 6 cut(s) | 125, 1323, 1611, 1754, 2171, 2632 |
| BclI | TGATCA | 1 cut(s) | 844 |
| BcoDI | GTCTC | 6 cut(s) | 301, 399, 982, 1181, 2593, 2625 |
| BfaI | CTAG | 4 cut(s) | 77, 612, 999, 2000 |
| BfmI | CTRYAG | 1 cut(s) | 776 |
| BfoI | RGCGCY | 1 cut(s) | 2006 |
| BfrI | CTTAAG | 1 cut(s) | 1013 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 568 |
| BisI | GCNGC | 7 cut(s) | 294, 432, 435, 1215, 1262, 1488, 2738 |
| BlsI | GCNGC | 7 cut(s) | 295, 433, 436, 1216, 1263, 1489, 2739 |
| BmcAI | AGTACT | 1 cut(s) | 786 |
| Bme1390I | CCNGG | 6 cut(s) | 125, 1323, 1611, 1754, 2171, 2632 |
| Bme18I | GGWCC | 1 cut(s) | 1325 |
| BmeT110I | CYCGRG | 1 cut(s) | 1875 |
| BmgT120I | GGNCC | 3 cut(s) | 750, 1325, 1933 |
| BmiI | GGNNCC | 1 cut(s) | 1429 |
| BmrFI | CCNGG | 6 cut(s) | 125, 1323, 1611, 1754, 2171, 2632 |
| BoxI | GACNNNNGTC | 1 cut(s) | 994 |
| BpiI | GAAGAC | 1 cut(s) | 1159 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1922, 1954 |
| BpmI | CTGGAG | 3 cut(s) | 435, 1437, 2192 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1929 |
| Bpu14I | TTCGAA | 2 cut(s) | 454, 865 |
| BpuEI | CTTGAG | 1 cut(s) | 1757 |
| BsaBI | GATNNNNATC | 3 cut(s) | 211, 474, 1023 |
| BsaJI | CCNNGG | 6 cut(s) | 362, 441, 1321, 1635, 1876, 2236 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1271, 1301, 2501, 2531 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 264, 725, 764, 1062, 1741, 1877, 2215, 2592, 2706 |
| Bse1I | ACTGG | 4 cut(s) | 280, 769, 1693, 1984 |
| Bse21I | CCTNAGG | 1 cut(s) | 1479 |
| Bse3DI | GCAATG | 6 cut(s) | 817, 1384, 1522, 2370, 2403, 2625 |
| Bse8I | GATNNNNATC | 3 cut(s) | 211, 474, 1023 |
| BseBI | CCWGG | 6 cut(s) | 125, 1323, 1611, 1754, 2171, 2632 |
| BseDI | CCNNGG | 6 cut(s) | 362, 441, 1321, 1635, 1876, 2236 |
| BseGI | GGATG | 7 cut(s) | 653, 1024, 1749, 1780, 2192, 2196, 2696 |
| BseJI | GATNNNNATC | 3 cut(s) | 211, 474, 1023 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 264, 725, 764, 1062, 1741, 1877, 2215, 2592, 2706 |
| BseMI | GCAATG | 6 cut(s) | 817, 1384, 1522, 2370, 2403, 2625 |
| BseMII | CTCAG | 5 cut(s) | 416, 828, 1525, 1920, 2630 |
| BseNI | ACTGG | 4 cut(s) | 280, 769, 1693, 1984 |
| BseRI | GAGGAG | 6 cut(s) | 315, 713, 901, 1292, 1578, 2725 |
| BseXI | GCAGC | 6 cut(s) | 280, 421, 443, 1273, 1499, 2724 |
| BseYI | CCCAGC | 1 cut(s) | 50 |
| BsgI | GTGCAG | 3 cut(s) | 420, 1649, 1926 |
| Bsh1236I | CGCG | 1 cut(s) | 1251 |
| Bsh1285I | CGRYCG | 1 cut(s) | 215 |
| BshFI | GGCC | 7 cut(s) | 218, 420, 752, 1614, 1935, 1983, 2369 |
| BshNI | GGYRCC | 1 cut(s) | 1427 |
| BsiEI | CGRYCG | 1 cut(s) | 215 |
| BsiHKAI | GWGCWC | 1 cut(s) | 577 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1875 |
| BslFI | GGGAC | 2 cut(s) | 1324, 2702 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 264, 725, 764, 1062, 1741, 1877, 2215, 2592, 2706 |
| BsmAI | GTCTC | 6 cut(s) | 301, 399, 982, 1181, 2593, 2625 |
| BsmFI | GGGAC | 2 cut(s) | 1324, 2702 |
| BsmI | GAATGC | 1 cut(s) | 2680 |
| BsnI | GGCC | 7 cut(s) | 218, 420, 752, 1614, 1935, 1983, 2369 |
| BsoBI | CYCGRG | 1 cut(s) | 1875 |
| Bsp119I | TTCGAA | 2 cut(s) | 454, 865 |
| Bsp1286I | GDGCHC | 1 cut(s) | 577 |
| Bsp19I | CCATGG | 1 cut(s) | 441 |
| BspACI | CCGC | 6 cut(s) | 1124, 1214, 1732, 1958, 2209, 2500 |
| BspANI | GGCC | 7 cut(s) | 218, 420, 752, 1614, 1935, 1983, 2369 |
| BspCNI | CTCAG | 5 cut(s) | 417, 829, 1524, 1921, 2629 |
| BspFNI | CGCG | 1 cut(s) | 1251 |
| BspLI | GGNNCC | 1 cut(s) | 1429 |
| BspPI | GGATC | 4 cut(s) | 630, 1469, 1799, 1889 |
| BspQI | GCTCTTC | 1 cut(s) | 2214 |
| BspT104I | TTCGAA | 2 cut(s) | 454, 865 |
| BspT107I | GGYRCC | 1 cut(s) | 1427 |
| BspTI | CTTAAG | 1 cut(s) | 1013 |
| BsrDI | GCAATG | 6 cut(s) | 817, 1384, 1522, 2370, 2403, 2625 |
| BsrI | ACTGG | 4 cut(s) | 280, 769, 1693, 1984 |
| BssECI | CCNNGG | 6 cut(s) | 362, 441, 1321, 1635, 1876, 2236 |
| BssNAI | GTATAC | 1 cut(s) | 528 |
| BssSI | CACGAG | 2 cut(s) | 106, 368 |
| BssT1I | CCWWGG | 3 cut(s) | 362, 441, 1635 |
| Bst1107I | GTATAC | 1 cut(s) | 528 |
| Bst2BI | CACGAG | 2 cut(s) | 106, 368 |
| Bst2UI | CCWGG | 6 cut(s) | 125, 1323, 1611, 1754, 2171, 2632 |
| Bst4CI | ACNGT | 2 cut(s) | 963, 2391 |
| Bst6I | CTCTTC | 7 cut(s) | 363, 639, 1269, 1301, 1596, 2061, 2214 |
| BstAFI | CTTAAG | 1 cut(s) | 1013 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1374 |
| BstBI | TTCGAA | 2 cut(s) | 454, 865 |
| BstC8I | GCNNGC | 3 cut(s) | 573, 2583, 2742 |
| BstDEI | CTNAG | 8 cut(s) | 38, 425, 837, 1479, 1511, 1929, 2336, 2616 |
| BstDSI | CCRYGG | 1 cut(s) | 441 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1875 |
| BstF5I | GGATG | 7 cut(s) | 653, 1024, 1749, 1780, 2192, 2196, 2696 |
| BstFNI | CGCG | 1 cut(s) | 1251 |
| BstH2I | RGCGCY | 1 cut(s) | 2006 |
| BstHHI | GCGC | 3 cut(s) | 900, 1253, 2005 |
| BstMAI | GTCTC | 6 cut(s) | 301, 399, 982, 1181, 2593, 2625 |
| BstMCI | CGRYCG | 1 cut(s) | 215 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 443, 568, 1374, 1980, 2279, 2325, 2582, 2587 |
| BstNI | CCWGG | 6 cut(s) | 125, 1323, 1611, 1754, 2171, 2632 |
| BstNSI | RCATGY | 1 cut(s) | 197 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 994 |
| BstSCI | CCNGG | 6 cut(s) | 123, 1321, 1609, 1752, 2169, 2630 |
| BstSFI | CTRYAG | 1 cut(s) | 776 |
| BstUI | CGCG | 1 cut(s) | 1251 |
| BstV1I | GCAGC | 6 cut(s) | 280, 421, 443, 1273, 1499, 2724 |
| BstV2I | GAAGAC | 1 cut(s) | 1159 |
| BstZ17I | GTATAC | 1 cut(s) | 528 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1479 |
| BsuRI | GGCC | 7 cut(s) | 218, 420, 752, 1614, 1935, 1983, 2369 |
| BtgI | CCRYGG | 1 cut(s) | 441 |
| BtsCI | GGATG | 7 cut(s) | 653, 1024, 1749, 1780, 2192, 2196, 2696 |
| BtsI | GCAGTG | 3 cut(s) | 349, 830, 1969 |
| BtsIMutI | CAGTG | 7 cut(s) | 349, 655, 830, 1686, 1969, 1977, 2387 |
| Cac8I | GCNNGC | 3 cut(s) | 573, 2583, 2742 |
| CfoI | GCGC | 3 cut(s) | 900, 1253, 2005 |
| Cfr13I | GGNCC | 3 cut(s) | 750, 1325, 1933 |
| CseI | GACGC | 1 cut(s) | 527 |
| Csp6I | GTAC | 4 cut(s) | 785, 1428, 2052, 2233 |
| CviAII | CATG | 9 cut(s) | 194, 318, 394, 442, 487, 723, 1258, 1955, 2225 |
| CviQI | GTAC | 4 cut(s) | 785, 1428, 2052, 2233 |
| DdeI | CTNAG | 8 cut(s) | 38, 425, 837, 1479, 1511, 1929, 2336, 2616 |
| DraI | TTTAAA | 1 cut(s) | 1704 |
| EaeI | YGGCCR | 1 cut(s) | 216 |
| Eam1104I | CTCTTC | 7 cut(s) | 363, 639, 1269, 1301, 1596, 2061, 2214 |
| EarI | CTCTTC | 7 cut(s) | 363, 639, 1269, 1301, 1596, 2061, 2214 |
| EciI | GGCGGA | 1 cut(s) | 2515 |
| Ecl136II | GAGCTC | 1 cut(s) | 575 |
| Eco130I | CCWWGG | 3 cut(s) | 362, 441, 1635 |
| Eco24I | GRGCYC | 1 cut(s) | 577 |
| Eco32I | GATATC | 1 cut(s) | 1714 |
| Eco47I | GGWCC | 1 cut(s) | 1325 |
| Eco53kI | GAGCTC | 1 cut(s) | 575 |
| Eco57I | CTGAAG | 2 cut(s) | 812, 1577 |
| Eco81I | CCTNAGG | 1 cut(s) | 1479 |
| Eco88I | CYCGRG | 1 cut(s) | 1875 |
| EcoICRI | GAGCTC | 1 cut(s) | 575 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1875 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1933 |
| EcoRII | CCWGG | 6 cut(s) | 123, 1321, 1609, 1752, 2169, 2630 |
| EcoRV | GATATC | 1 cut(s) | 1714 |
| EcoT14I | CCWWGG | 3 cut(s) | 362, 441, 1635 |
| EcoT38I | GRGCYC | 1 cut(s) | 577 |
| ErhI | CCWWGG | 3 cut(s) | 362, 441, 1635 |
| FaeI | CATG | 9 cut(s) | 197, 321, 397, 445, 490, 726, 1261, 1958, 2228 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 104, 136, 525, 557 |
| FaqI | GGGAC | 2 cut(s) | 1324, 2702 |
| FatI | CATG | 9 cut(s) | 193, 317, 393, 441, 486, 722, 1257, 1954, 2224 |
| FauNDI | CATATG | 1 cut(s) | 1726 |
| FbaI | TGATCA | 1 cut(s) | 844 |
| FblI | GTMKAC | 1 cut(s) | 527 |
| Fnu4HI | GCNGC | 7 cut(s) | 294, 432, 435, 1215, 1262, 1488, 2738 |
| FokI | GGATG | 7 cut(s) | 640, 1031, 1736, 1767, 2179, 2183, 2683 |
| FriOI | GRGCYC | 1 cut(s) | 577 |
| Fsp4HI | GCNGC | 7 cut(s) | 294, 432, 435, 1215, 1262, 1488, 2738 |
| FspBI | CTAG | 4 cut(s) | 77, 612, 999, 2000 |
| GlaI | GCGC | 3 cut(s) | 899, 1252, 2004 |
| GluI | GCNGC | 7 cut(s) | 294, 432, 435, 1215, 1262, 1488, 2738 |
| GsaI | CCCAGC | 1 cut(s) | 54 |
| GsuI | CTGGAG | 3 cut(s) | 435, 1437, 2192 |
| HaeII | RGCGCY | 1 cut(s) | 2006 |
| HaeIII | GGCC | 7 cut(s) | 218, 420, 752, 1614, 1935, 1983, 2369 |
| HgaI | GACGC | 1 cut(s) | 527 |
| HhaI | GCGC | 3 cut(s) | 900, 1253, 2005 |
| Hin1II | CATG | 9 cut(s) | 197, 321, 397, 445, 490, 726, 1261, 1958, 2228 |
| Hin6I | GCGC | 3 cut(s) | 898, 1251, 2003 |
| HinP1I | GCGC | 3 cut(s) | 898, 1251, 2003 |
| HincII | GTYRAC | 4 cut(s) | 959, 966, 2097, 2167 |
| HindII | GTYRAC | 4 cut(s) | 959, 966, 2097, 2167 |
| HindIII | AAGCTT | 2 cut(s) | 113, 1769 |
| HpaI | GTTAAC | 1 cut(s) | 966 |
| HphI | GGTGA | 5 cut(s) | 592, 1859, 1896, 1904, 2480 |
| Hpy166II | GTNNAC | 6 cut(s) | 528, 959, 966, 1387, 2097, 2167 |
| Hpy8I | GTNNAC | 6 cut(s) | 528, 959, 966, 1387, 2097, 2167 |
| HpyAV | CCTTC | 7 cut(s) | 663, 729, 1869, 1881, 2089, 2101, 2710 |
| HpyCH4III | ACNGT | 2 cut(s) | 963, 2391 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 443, 568, 1374, 1980, 2279, 2325, 2582, 2587 |
| HpyF3I | CTNAG | 8 cut(s) | 38, 425, 837, 1479, 1511, 1929, 2336, 2616 |
| Hsp92II | CATG | 9 cut(s) | 197, 321, 397, 445, 490, 726, 1261, 1958, 2228 |
| HspAI | GCGC | 3 cut(s) | 898, 1251, 2003 |
| KpnI | GGTACC | 1 cut(s) | 1431 |
| Ksp22I | TGATCA | 1 cut(s) | 844 |
| KspAI | GTTAAC | 1 cut(s) | 966 |
| LguI | GCTCTTC | 1 cut(s) | 2214 |
| LmnI | GCTCC | 4 cut(s) | 1365, 2173, 2669, 2712 |
| Lsp1109I | GCAGC | 6 cut(s) | 280, 421, 443, 1273, 1499, 2724 |
| MaeI | CTAG | 4 cut(s) | 77, 612, 999, 2000 |
| MaeIII | GTNAC | 5 cut(s) | 137, 321, 1231, 1822, 1902 |
| MhlI | GDGCHC | 1 cut(s) | 577 |
| MlyI | GAGTC | 5 cut(s) | 11, 603, 626, 1134, 2684 |
| MmeI | TCCRAC | 5 cut(s) | 7, 600, 1508, 1522, 2634 |
| MslI | CAYNNNNRTG | 1 cut(s) | 228 |
| MspA1I | CMGCKG | 1 cut(s) | 434 |
| MspCI | CTTAAG | 1 cut(s) | 1013 |
| MspR9I | CCNGG | 6 cut(s) | 125, 1323, 1611, 1754, 2171, 2632 |
| Mva1269I | GAATGC | 1 cut(s) | 2680 |
| MvaI | CCWGG | 6 cut(s) | 125, 1323, 1611, 1754, 2171, 2632 |
| MvnI | CGCG | 1 cut(s) | 1251 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 443, 568, 1374, 1980, 2279, 2325, 2582, 2587 |
| NcoI | CCATGG | 1 cut(s) | 441 |
| NdeI | CATATG | 1 cut(s) | 1726 |
| NlaIII | CATG | 9 cut(s) | 197, 321, 397, 445, 490, 726, 1261, 1958, 2228 |
| NlaIV | GGNNCC | 1 cut(s) | 1429 |
| NmuCI | GTSAC | 4 cut(s) | 321, 1231, 1822, 1902 |
| NspI | RCATGY | 1 cut(s) | 197 |
| NspV | TTCGAA | 2 cut(s) | 454, 865 |
| PciI | ACATGT | 1 cut(s) | 193 |
| PciSI | GCTCTTC | 1 cut(s) | 2214 |
| PctI | GAATGC | 1 cut(s) | 2680 |
| PfeI | GAWTC | 8 cut(s) | 155, 181, 867, 1246, 1412, 1617, 1881, 2554 |
| PfoI | TCCNGGA | 1 cut(s) | 123 |
| PkrI | GCNGC | 7 cut(s) | 295, 433, 436, 1216, 1263, 1489, 2739 |
| Ple19I | CGATCG | 1 cut(s) | 215 |
| PleI | GAGTC | 5 cut(s) | 11, 602, 625, 1134, 2684 |
| PpsI | GAGTC | 5 cut(s) | 11, 602, 625, 1134, 2684 |
| PscI | ACATGT | 1 cut(s) | 193 |
| PshAI | GACNNNNGTC | 1 cut(s) | 994 |
| PshBI | ATTAAT | 1 cut(s) | 1470 |
| PsiI | TTATAA | 1 cut(s) | 2568 |
| Psp124BI | GAGCTC | 1 cut(s) | 577 |
| Psp6I | CCWGG | 6 cut(s) | 123, 1321, 1609, 1752, 2169, 2630 |
| PspFI | CCCAGC | 1 cut(s) | 50 |
| PspGI | CCWGG | 6 cut(s) | 123, 1321, 1609, 1752, 2169, 2630 |
| PspN4I | GGNNCC | 1 cut(s) | 1429 |
| PspPI | GGNCC | 3 cut(s) | 750, 1325, 1933 |
| PvuI | CGATCG | 1 cut(s) | 215 |
| PvuII | CAGCTG | 1 cut(s) | 434 |
| RsaI | GTAC | 4 cut(s) | 786, 1429, 2053, 2234 |
| RsaNI | GTAC | 4 cut(s) | 785, 1428, 2052, 2233 |
| RseI | CAYNNNNRTG | 1 cut(s) | 228 |
| SacI | GAGCTC | 1 cut(s) | 577 |
| SapI | GCTCTTC | 1 cut(s) | 2214 |
| SatI | GCNGC | 7 cut(s) | 294, 432, 435, 1215, 1262, 1488, 2738 |
| Sau96I | GGNCC | 3 cut(s) | 750, 1325, 1933 |
| ScaI | AGTACT | 1 cut(s) | 786 |
| SchI | GAGTC | 5 cut(s) | 11, 603, 626, 1134, 2684 |
| ScrFI | CCNGG | 6 cut(s) | 125, 1323, 1611, 1754, 2171, 2632 |
| SduI | GDGCHC | 1 cut(s) | 577 |
| SfcI | CTRYAG | 1 cut(s) | 776 |
| SfuI | TTCGAA | 2 cut(s) | 454, 865 |
| SinI | GGWCC | 1 cut(s) | 1325 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 228 |
| SmlI | CTYRAG | 2 cut(s) | 1013, 1736 |
| SmoI | CTYRAG | 2 cut(s) | 1013, 1736 |
| SsiI | CCGC | 6 cut(s) | 1124, 1214, 1732, 1958, 2209, 2500 |
| SspI | AATATT | 3 cut(s) | 983, 1361, 2572 |
| SspMI | CTAG | 4 cut(s) | 77, 612, 999, 2000 |
| SstI | GAGCTC | 1 cut(s) | 577 |
| StyD4I | CCNGG | 6 cut(s) | 123, 1321, 1609, 1752, 2169, 2630 |
| StyI | CCWWGG | 3 cut(s) | 362, 441, 1635 |
| TaaI | ACNGT | 2 cut(s) | 963, 2391 |
| TaqI | TCGA | 4 cut(s) | 211, 454, 547, 865 |
| TatI | WGTACW | 1 cut(s) | 784 |
| TauI | GCSGC | 1 cut(s) | 1217 |
| TfiI | GAWTC | 8 cut(s) | 155, 181, 867, 1246, 1412, 1617, 1881, 2554 |
| TscAI | CASTG | 7 cut(s) | 356, 655, 830, 1693, 1976, 1984, 2394 |
| TseFI | GTSAC | 4 cut(s) | 321, 1231, 1822, 1902 |
| TseI | GCWGC | 6 cut(s) | 293, 431, 434, 1261, 1487, 2737 |
| Tsp45I | GTSAC | 4 cut(s) | 321, 1231, 1822, 1902 |
| TspDTI | ATGAA | 8 cut(s) | 402, 711, 1113, 1259, 1662, 2414, 2429, 2483 |
| TspGWI | ACGGA | 1 cut(s) | 1887 |
| TspRI | CASTG | 7 cut(s) | 356, 655, 830, 1693, 1976, 1984, 2394 |
| Vha464I | CTTAAG | 1 cut(s) | 1013 |
| VpaK11BI | GGWCC | 1 cut(s) | 1325 |
| VspI | ATTAAT | 1 cut(s) | 1470 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1875 |
| XapI | RAATTY | 5 cut(s) | 1075, 2088, 2331, 2355, 2490 |
| XceI | RCATGY | 1 cut(s) | 197 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1976, 2703 |
| XmiI | GTMKAC | 1 cut(s) | 527 |
| XspI | CTAG | 4 cut(s) | 77, 612, 999, 2000 |
| ZrmI | AGTACT | 1 cut(s) | 786 |