Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0000797

Physical Location & Seq

Genomic Coordinates Forward (+)

17603026 .. 17608980

Gene Structure 5955 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G178800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 591 bp

ATGTCCGAGTCAAAGAACACTGCAGACTCGCCCGAGTCAGCTACCCAAACCCAACCCTCCAACTCATGGCCCTCAGCCACAACTTCTCTGTTTCTAATCCTAATACTTCCCGTCATCACCGCCACGCTCATCTACCAACTCGACTCGTTCGACCCAGCCCCTCTGCCTTATCACGAGTTGACTCGCCGCTTAACCAGGAGAGCTCCGGCTCACAACCCTCGCATGCTTCGAGGGTCAGAGCGTGTGGGCTTTGGGGTCTTGCGGGCCCCCGAGGACGTGCAGGGACGGACCCAGAAATTTTGTGTCGACGTGGCTTATCATTCCGGGTCGGGGCTCATTTACACGGGTTGTGAAGACGGGTGGCTCAAGCGAGTTAAACTCAACGACTCGGAAAATCCCGAGTTTGTGGTGGAGAGCTGGGTCAACACGGGCGGCAGACCGCTCGGGCTCGCTTTCGGACTTCACAATGAAGTTGTCGTCGCTGATGCCGATAAGCAAGACATCCGATTGCAGAAACCACCTCCAATTGTCTATAGTTTCACCAGATATAATCGCAAAGGCAAAAGGAAATACTTCTACAAGAAAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Str_synth

Protein Analysis

197

Amino Acids

22.1

Weight (kDa)

9.46

Isoelectric Point (pI)

54.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000797)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51420 AT3G51430 AT3G51430 AT3G51440 AT3G51450
fragaria_vesca	FvH4_1g10570 FvH4_1g10571 FvH4_1g10572
malus_domestica	MD02G1119800.v1.1 MD02G1119900.v1.1
prunus_persica	Prupe.7G178800_v2.0.a1 Prupe.7G179100_v2.0.a1
pyrus_communis	pycom02g09330 pycom02g09340 pycom02g09350 pycom15g20840
rosa_chinensis	RchiOBHm_Chr2g0097641 RchiOBHm_Chr2g0173351 RchiOBHm_Chr3g0449291 RchiOBHm_Chr3g0492501 RchiOBHm_Chr3g0492521 RchiOBHm_Chr3g0492531
rosa_laevigata	RLG00000016730 RLG00000016731 RLG00000022762 RLG00000025842
rosa_multiflora	Rmu_co8425041.1_g000001 Rmu_sc0000971.1_g000010 Rmu_sc0000971.1_g000016 Rmu_sc0004874.1_g000001 Rmu_sc0010088.1_g000002 Rmu_sc0010088.1_g000009 Rmu_sc0016955.1_g000001 Rmu_sc0020190.1_g000005 Rmu_sc0026896.1_g000001 Rmu_ssc0000282.1_g000007
rosa_roxburghii	Rroxscaffold_2G00144630 Rroxscaffold_2G00144640 Rroxscaffold_6G00392230 Rroxscaffold_6G00427290
rosa_rugosa	Rorug02G0068000 Rorug02G0068100 Rorug02G0619400 Rorug02G0619400 Rorug03G0254300
rosa_samantha	Rh2AG114400 Rh2AG114500 Rh2AG647900 Rh2BG117100 Rh2BG117300 Rh2BG658400 Rh2CG119100 Rh2CG119300 Rh2DG118100 Rh2DG673800 Rh3AG017400 Rh3AG304700 Rh3BG017500 Rh3BG340600 Rh3CG016500 Rh3CG338000 Rh3CG338100 Rh3DG017800 Rh3DG339800
rosa_wichuraiana	Rw2G008940 Rw2G008960 Rw2G053190 Rw3G001330 Rw3G026840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	66
AccBSI	CCGCTC	1 cut(s)	442
AccI	GTMKAC	1 cut(s)	306
AciI	CCGC	5 cut(s)	120, 187, 262, 432, 440
AcsI	RAATTY	1 cut(s)	296
AfiI	CCNNNNNNNGG	2 cut(s)	66, 330
AjiI	CACGTC	2 cut(s)	277, 310
AjnI	CCWGG	1 cut(s)	194
AluBI	AGCT	3 cut(s)	41, 203, 417
AluI	AGCT	3 cut(s)	41, 203, 417
Alw21I	GWGCWC	1 cut(s)	205
Ama87I	CYCGRG	4 cut(s)	32, 269, 398, 443
AoxI	GGCC	2 cut(s)	68, 264
ApaI	GGGCCC	1 cut(s)	268
ApoI	RAATTY	1 cut(s)	296
Asp700I	GAANNNNTTC	1 cut(s)	572
AspS9I	GGNCC	4 cut(s)	69, 264, 265, 288
AsuC2I	CCSGG	1 cut(s)	325
AsuHPI	GGTGA	2 cut(s)	109, 532
AvaI	CYCGRG	4 cut(s)	32, 269, 398, 443
AvaII	GGWCC	1 cut(s)	288
BaeGI	GKGCMC	1 cut(s)	268
BanII	GRGCYC	4 cut(s)	205, 268, 336, 450
BauI	CACGAG	1 cut(s)	173
BbsI	GAAGAC	1 cut(s)	360
Bbv12I	GWGCWC	1 cut(s)	205
BbvCI	CCTCAGC	1 cut(s)	73
BcgI	CGANNNNNNTGC	2 cut(s)	424, 458
BciT130I	CCWGG	1 cut(s)	196
BcnI	CCSGG	1 cut(s)	325
BfmI	CTRYAG	2 cut(s)	21, 532
BisI	GCNGC	2 cut(s)	187, 433
BlsI	GCNGC	2 cut(s)	188, 434
Bme1390I	CCNGG	2 cut(s)	196, 325
Bme18I	GGWCC	1 cut(s)	288
BmeT110I	CYCGRG	4 cut(s)	32, 269, 398, 443
BmgBI	CACGTC	2 cut(s)	277, 310
BmgT120I	GGNCC	4 cut(s)	69, 264, 265, 288
BmiI	GGNNCC	3 cut(s)	266, 267, 290
BmrFI	CCNGG	2 cut(s)	196, 325
BmsI	GCATC	1 cut(s)	475
BpiI	GAAGAC	1 cut(s)	360
BplI	GAGNNNNNCTC	2 cut(s)	363, 395
Bpu10I	CCTNAGC	1 cut(s)	73
BpuEI	CTTGAG	1 cut(s)	350
BpuMI	CCSGG	1 cut(s)	325
BsaJI	CCNNGG	1 cut(s)	270
Bsc4I	CCNNNNNNNGG	2 cut(s)	66, 330
BseBI	CCWGG	1 cut(s)	196
BseDI	CCNNGG	1 cut(s)	270
BseGI	GGATG	1 cut(s)	501
BseLI	CCNNNNNNNGG	2 cut(s)	66, 330
BseMII	CTCAG	1 cut(s)	87
BseSI	GKGCMC	1 cut(s)	268
BseYI	CCCAGC	2 cut(s)	154, 417
BsgI	GTGCAG	1 cut(s)	299
BshFI	GGCC	2 cut(s)	70, 266
BsiHKAI	GWGCWC	1 cut(s)	205
BsiHKCI	CYCGRG	4 cut(s)	32, 269, 398, 443
BsiSI	CCGG	2 cut(s)	206, 324
BslFI	GGGAC	1 cut(s)	297
BslI	CCNNNNNNNGG	2 cut(s)	66, 330
BsmFI	GGGAC	1 cut(s)	297
BsnI	GGCC	2 cut(s)	70, 266
BsoBI	CYCGRG	4 cut(s)	32, 269, 398, 443
Bsp120I	GGGCCC	1 cut(s)	264
Bsp1286I	GDGCHC	4 cut(s)	205, 268, 336, 450
BspACI	CCGC	5 cut(s)	120, 187, 262, 432, 440
BspANI	GGCC	2 cut(s)	70, 266
BspCNI	CTCAG	1 cut(s)	86
BspLI	GGNNCC	3 cut(s)	266, 267, 290
BspMAI	CTGCAG	1 cut(s)	25
BsrBI	CCGCTC	1 cut(s)	442
BssECI	CCNNGG	1 cut(s)	270
BssSI	CACGAG	1 cut(s)	173
Bst2BI	CACGAG	1 cut(s)	173
Bst2UI	CCWGG	1 cut(s)	196
BstC8I	GCNNGC	3 cut(s)	224, 264, 450
BstDEI	CTNAG	1 cut(s)	73
BstF5I	GGATG	1 cut(s)	501
BstNI	CCWGG	1 cut(s)	196
BstNSI	RCATGY	1 cut(s)	226
BstSCI	CCNGG	2 cut(s)	194, 323
BstSFI	CTRYAG	2 cut(s)	21, 532
BstSLI	GKGCMC	1 cut(s)	268
BstV2I	GAAGAC	1 cut(s)	360
BsuRI	GGCC	2 cut(s)	70, 266
BtrI	CACGTC	2 cut(s)	277, 310
BtsCI	GGATG	1 cut(s)	501
BtsI	GCAGTG	1 cut(s)	18
BtsIMutI	CAGTG	1 cut(s)	18
Cac8I	GCNNGC	3 cut(s)	224, 264, 450
Cfr13I	GGNCC	4 cut(s)	69, 264, 265, 288
CviAII	CATG	2 cut(s)	66, 223
DdeI	CTNAG	1 cut(s)	73
Ecl136II	GAGCTC	1 cut(s)	203
Eco24I	GRGCYC	4 cut(s)	205, 268, 336, 450
Eco47I	GGWCC	1 cut(s)	288
Eco53kI	GAGCTC	1 cut(s)	203
Eco88I	CYCGRG	4 cut(s)	32, 269, 398, 443
EcoICRI	GAGCTC	1 cut(s)	203
EcoO109I	RGGNCCY	1 cut(s)	265
EcoRII	CCWGG	1 cut(s)	194
EcoT38I	GRGCYC	4 cut(s)	205, 268, 336, 450
FaeI	CATG	2 cut(s)	69, 226
FaiI	YATR	4 cut(s)	67, 224, 534, 549
FaqI	GGGAC	1 cut(s)	297
FatI	CATG	2 cut(s)	65, 222
FauI	CCCGC	1 cut(s)	255
FblI	GTMKAC	1 cut(s)	306
Fnu4HI	GCNGC	2 cut(s)	187, 433
FokI	GGATG	1 cut(s)	488
FriOI	GRGCYC	4 cut(s)	205, 268, 336, 450
Fsp4HI	GCNGC	2 cut(s)	187, 433
GluI	GCNGC	2 cut(s)	187, 433
GsaI	CCCAGC	2 cut(s)	158, 421
HaeIII	GGCC	2 cut(s)	70, 266
HapII	CCGG	2 cut(s)	206, 324
Hin1II	CATG	2 cut(s)	69, 226
HincII	GTYRAC	3 cut(s)	180, 307, 424
HindII	GTYRAC	3 cut(s)	180, 307, 424
HinfI	GANTC	6 cut(s)	8, 26, 35, 143, 181, 386
HpaII	CCGG	2 cut(s)	206, 324
HphI	GGTGA	2 cut(s)	109, 532
Hpy166II	GTNNAC	3 cut(s)	180, 307, 424
Hpy188I	TCNGA	5 cut(s)	7, 238, 391, 458, 506
Hpy188III	TCNNGA	2 cut(s)	173, 398
Hpy8I	GTNNAC	3 cut(s)	180, 307, 424
Hpy99I	CGWCG	2 cut(s)	311, 482
HpyCH4IV	ACGT	2 cut(s)	276, 309
HpyCH4V	TGCA	3 cut(s)	23, 280, 511
HpyF3I	CTNAG	1 cut(s)	73
HpySE526I	ACGT	2 cut(s)	276, 309
Hsp92II	CATG	2 cut(s)	69, 226
LmnI	GCTCC	1 cut(s)	208
LpnPI	CCDG	9 cut(s)	168, 181, 208, 219, 266, 305, 337, 403, 556
LweI	GCATC	1 cut(s)	475
MaeII	ACGT	2 cut(s)	276, 309
MbiI	CCGCTC	1 cut(s)	442
MboII	GAAGA	1 cut(s)	365
MfeI	CAATTG	1 cut(s)	525
MhlI	GDGCHC	4 cut(s)	205, 268, 336, 450
MluCI	AATT	2 cut(s)	296, 525
MlyI	GAGTC	6 cut(s)	17, 20, 44, 137, 175, 380
MmeI	TCCRAC	1 cut(s)	84
MnlI	CCTC	7 cut(s)	67, 82, 171, 224, 228, 265, 531
MroXI	GAANNNNTTC	1 cut(s)	572
MseI	TTAA	2 cut(s)	191, 375
MspI	CCGG	2 cut(s)	206, 324
MspR9I	CCNGG	2 cut(s)	196, 325
MunI	CAATTG	1 cut(s)	525
MvaI	CCWGG	1 cut(s)	196
NciI	CCSGG	1 cut(s)	325
NlaIII	CATG	2 cut(s)	69, 226
NlaIV	GGNNCC	3 cut(s)	266, 267, 290
NspI	RCATGY	1 cut(s)	226
PaeI	GCATGC	1 cut(s)	226
PcsI	WCGNNNNNNNCGW	3 cut(s)	147, 226, 486
PdmI	GAANNNNTTC	1 cut(s)	572
PflMI	CCANNNNNTGG	1 cut(s)	66
PkrI	GCNGC	2 cut(s)	188, 434
PleI	GAGTC	6 cut(s)	16, 20, 43, 137, 175, 380
PpsI	GAGTC	6 cut(s)	16, 20, 43, 137, 175, 380
Psp124BI	GAGCTC	1 cut(s)	205
Psp6I	CCWGG	1 cut(s)	194
PspFI	CCCAGC	2 cut(s)	154, 417
PspGI	CCWGG	1 cut(s)	194
PspN4I	GGNNCC	3 cut(s)	266, 267, 290
PspOMI	GGGCCC	1 cut(s)	264
PspPI	GGNCC	4 cut(s)	69, 264, 265, 288
PstI	CTGCAG	1 cut(s)	25
SacI	GAGCTC	1 cut(s)	205
SalI	GTCGAC	1 cut(s)	305
SaqAI	TTAA	2 cut(s)	191, 375
SatI	GCNGC	2 cut(s)	187, 433
Sau96I	GGNCC	4 cut(s)	69, 264, 265, 288
SchI	GAGTC	6 cut(s)	17, 20, 44, 137, 175, 380
ScrFI	CCNGG	2 cut(s)	196, 325
SduI	GDGCHC	4 cut(s)	205, 268, 336, 450
SetI	ASST	6 cut(s)	43, 205, 279, 312, 419, 523
SfaNI	GCATC	1 cut(s)	475
SfcI	CTRYAG	2 cut(s)	21, 532
SinI	GGWCC	1 cut(s)	288
SmlI	CTYRAG	1 cut(s)	365
SmoI	CTYRAG	1 cut(s)	365
SphI	GCATGC	1 cut(s)	226
Sse9I	AATT	2 cut(s)	296, 525
SsiI	CCGC	5 cut(s)	120, 187, 262, 432, 440
SstI	GAGCTC	1 cut(s)	205
StyD4I	CCNGG	2 cut(s)	194, 323
TaiI	ACGT	2 cut(s)	279, 312
TaqI	TCGA	4 cut(s)	141, 150, 229, 306
TasI	AATT	2 cut(s)	296, 525
TauI	GCSGC	2 cut(s)	189, 435
Tru1I	TTAA	2 cut(s)	191, 375
Tru9I	TTAA	2 cut(s)	191, 375
TscAI	CASTG	1 cut(s)	25
TspDTI	ATGAA	1 cut(s)	483
TspGWI	ACGGA	1 cut(s)	301
TspRI	CASTG	1 cut(s)	25
Van91I	CCANNNNNTGG	1 cut(s)	66
VpaK11BI	GGWCC	1 cut(s)	288
XapI	RAATTY	1 cut(s)	296
XceI	RCATGY	1 cut(s)	226
XmiI	GTMKAC	1 cut(s)	306
XmnI	GAANNNNTTC	1 cut(s)	572

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.