Rmu_sc0000971.1_g000010

Adipocyte plasma membrane-associated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000971.1
OG0000797
Physical Location & Seq
Forward (+)
36527 .. 37894
1368 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000971.1_g000010.1.cds

Sequence Viewer

Length: 561 bp
atggccgtcttaaacactctctttttctcaatactggttccagtggcggcggctgtgctcctctaccagttcgactcgttcgacccggctcctctgccgcttcacgagttgagtgagcaagtcgcggctgccccgaggcgtaatgggcacatgctcaaagggtcggagtttttgggtgttgggactttagcagggccagaagacgttgcttatgattccaagtcgggactcatttacacgggatgtgcggacgggtggatcaagcgagtcaagctgaacgagtcggctgatgactcggtggtggagaactgggttaataccggcgggagaccactcggactcgctcacgaacatggcggaaagcttttggtagctgacgcggaaaaggtcagcgtcacttttattctcctcaacattaacatgtttctttggttaccactcttcctcttttgcttcgatgtcctcaacctctttactctccggccaccaccgccacctcgtcacaaggctccccaccaccgcgaccaccatgaccacctccattccccaaagacaccctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0012505 GO:0016020 GO:0016787 GO:0016788 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Str_synth

Protein Analysis

186

Amino Acids

20.5

Weight (kDa)

6.23

Isoelectric Point (pI)

44.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 3 cut(s) 125, 380, 522
AclWI GGATC 1 cut(s) 266
AcoI YGGCCR 2 cut(s) 3, 482
AflIII ACRYGT 1 cut(s) 420
AluBI AGCT 3 cut(s) 274, 364, 374
AluI AGCT 3 cut(s) 274, 364, 374
Alw21I GWGCWC 1 cut(s) 60
Alw26I GTCTC 1 cut(s) 322
AlwI GGATC 1 cut(s) 266
Ama87I CYCGRG 1 cut(s) 133
AoxI GGCC 3 cut(s) 3, 194, 482
ApeKI GCWGC 1 cut(s) 128
AspS9I GGNCC 1 cut(s) 194
AsuC2I CCSGG 1 cut(s) 86
AvaI CYCGRG 1 cut(s) 133
BaeGI GKGCMC 1 cut(s) 150
BauI CACGAG 1 cut(s) 104
BbsI GAAGAC 1 cut(s) 207
Bbv12I GWGCWC 1 cut(s) 60
BbvI GCAGC 1 cut(s) 115
BcnI CCSGG 1 cut(s) 86
BcoDI GTCTC 1 cut(s) 322
BfaI CTAG 1 cut(s) 559
BisI GCNGC 5 cut(s) 48, 51, 98, 126, 129
BlsI GCNGC 5 cut(s) 49, 52, 99, 127, 130
Bme1390I CCNGG 1 cut(s) 86
BmeT110I CYCGRG 1 cut(s) 133
BmgT120I GGNCC 1 cut(s) 194
BmiI GGNNCC 3 cut(s) 39, 90, 510
BmrFI CCNGG 1 cut(s) 86
BmrI ACTGGG 1 cut(s) 319
BmuI ACTGGG 1 cut(s) 319
BpiI GAAGAC 1 cut(s) 207
BpuMI CCSGG 1 cut(s) 86
BsaI GGTCTC 1 cut(s) 322
BsaJI CCNNGG 1 cut(s) 134
Bse118I RCCGGY 1 cut(s) 320
Bse1I ACTGG 4 cut(s) 39, 41, 67, 314
BseDI CCNNGG 1 cut(s) 134
BseGI GGATG 1 cut(s) 248
BseNI ACTGG 4 cut(s) 39, 41, 67, 314
BseRI GAGGAG 3 cut(s) 50, 81, 398
BseSI GKGCMC 1 cut(s) 150
BseXI GCAGC 1 cut(s) 115
Bsh1236I CGCG 3 cut(s) 125, 380, 522
BshFI GGCC 3 cut(s) 5, 196, 484
BsiHKAI GWGCWC 1 cut(s) 60
BsiHKCI CYCGRG 1 cut(s) 133
BsiSI CCGG 3 cut(s) 86, 321, 481
BslFI GGGAC 2 cut(s) 196, 240
BsmAI GTCTC 1 cut(s) 322
BsmFI GGGAC 2 cut(s) 196, 240
BsnI GGCC 3 cut(s) 5, 196, 484
Bso31I GGTCTC 1 cut(s) 322
BsoBI CYCGRG 1 cut(s) 133
Bsp1286I GDGCHC 2 cut(s) 60, 150
Bsp143I GATC 1 cut(s) 258
BspANI GGCC 3 cut(s) 5, 196, 484
BspFNI CGCG 3 cut(s) 125, 380, 522
BspLI GGNNCC 3 cut(s) 39, 90, 510
BspPI GGATC 1 cut(s) 266
BspTNI GGTCTC 1 cut(s) 322
BsrFI RCCGGY 1 cut(s) 320
BsrI ACTGG 4 cut(s) 39, 41, 67, 314
BssAI RCCGGY 1 cut(s) 320
BssECI CCNNGG 1 cut(s) 134
BssMI GATC 1 cut(s) 258
BssSI CACGAG 1 cut(s) 104
Bst2BI CACGAG 1 cut(s) 104
Bst6I CTCTTC 1 cut(s) 446
BstEII GGTNACC 1 cut(s) 432
BstF5I GGATG 1 cut(s) 248
BstFNI CGCG 3 cut(s) 125, 380, 522
BstKTI GATC 1 cut(s) 261
BstMAI GTCTC 1 cut(s) 322
BstMBI GATC 1 cut(s) 258
BstMWI GCNNNNNNNGC 3 cut(s) 145, 271, 490
BstNSI RCATGY 2 cut(s) 154, 424
BstPI GGTNACC 1 cut(s) 432
BstSCI CCNGG 1 cut(s) 84
BstSLI GKGCMC 1 cut(s) 150
BstUI CGCG 3 cut(s) 125, 380, 522
BstV1I GCAGC 1 cut(s) 115
BstV2I GAAGAC 1 cut(s) 207
BsuRI GGCC 3 cut(s) 5, 196, 484
BtsCI GGATG 1 cut(s) 248
BtsIMutI CAGTG 1 cut(s) 48
Cfr10I RCCGGY 1 cut(s) 320
Cfr13I GGNCC 1 cut(s) 194
CseI GACGC 2 cut(s) 382, 386
CviAII CATG 4 cut(s) 151, 353, 421, 530
DpnI GATC 1 cut(s) 260
DpnII GATC 1 cut(s) 258
EaeI YGGCCR 2 cut(s) 3, 482
Eam1104I CTCTTC 1 cut(s) 446
EarI CTCTTC 1 cut(s) 446
EciI GGCGGA 1 cut(s) 372
Eco31I GGTCTC 1 cut(s) 322
Eco88I CYCGRG 1 cut(s) 133
Eco91I GGTNACC 1 cut(s) 432
EcoO65I GGTNACC 1 cut(s) 432
FaeI CATG 4 cut(s) 154, 356, 424, 533
FaiI YATR 5 cut(s) 152, 213, 354, 422, 531
FaqI GGGAC 2 cut(s) 196, 240
FatI CATG 4 cut(s) 150, 352, 420, 529
FauI CCCGC 1 cut(s) 317
Fnu4HI GCNGC 5 cut(s) 48, 51, 98, 126, 129
FokI GGATG 1 cut(s) 255
Fsp4HI GCNGC 5 cut(s) 48, 51, 98, 126, 129
FspBI CTAG 1 cut(s) 559
GluI GCNGC 5 cut(s) 48, 51, 98, 126, 129
HaeIII GGCC 3 cut(s) 5, 196, 484
HapII CCGG 3 cut(s) 86, 321, 481
HgaI GACGC 2 cut(s) 382, 386
Hin1II CATG 4 cut(s) 154, 356, 424, 533
HindIII AAGCTT 1 cut(s) 362
HinfI GANTC 7 cut(s) 74, 215, 228, 267, 281, 293, 339
HpaII CCGG 3 cut(s) 86, 321, 481
Hpy188I TCNGA 2 cut(s) 166, 338
Hpy188III TCNNGA 3 cut(s) 104, 225, 347
HpyCH4IV ACGT 1 cut(s) 204
HpyF10VI GCNNNNNNNGC 3 cut(s) 145, 271, 490
HpySE526I ACGT 1 cut(s) 204
Hsp92II CATG 4 cut(s) 154, 356, 424, 533
Kzo9I GATC 1 cut(s) 258
LmnI GCTCC 3 cut(s) 63, 94, 514
LpnPI CCDG 9 cut(s) 20, 54, 80, 99, 177, 210, 295, 334, 494
Lsp1109I GCAGC 1 cut(s) 115
MaeI CTAG 1 cut(s) 559
MaeII ACGT 1 cut(s) 204
MaeIII GTNAC 3 cut(s) 394, 432, 500
MalI GATC 1 cut(s) 260
MboI GATC 1 cut(s) 258
MboII GAAGA 2 cut(s) 212, 433
MhlI GDGCHC 2 cut(s) 60, 150
MlyI GAGTC 6 cut(s) 68, 222, 276, 287, 290, 333
MmeI TCCRAC 1 cut(s) 144
MnlI CCTC 9 cut(s) 71, 102, 129, 419, 455, 473, 479, 507, 548
MseI TTAA 3 cut(s) 11, 315, 417
MslI CAYNNNNRTG 2 cut(s) 351, 419
MspI CCGG 3 cut(s) 86, 321, 481
MspR9I CCNGG 1 cut(s) 86
MvnI CGCG 3 cut(s) 125, 380, 522
MwoI GCNNNNNNNGC 3 cut(s) 145, 271, 490
NciI CCSGG 1 cut(s) 86
NdeII GATC 1 cut(s) 258
NlaIII CATG 4 cut(s) 154, 356, 424, 533
NlaIV GGNNCC 3 cut(s) 39, 90, 510
NmuCI GTSAC 2 cut(s) 394, 500
NspI RCATGY 2 cut(s) 154, 424
PciI ACATGT 1 cut(s) 420
PcsI WCGNNNNNNNCGW 1 cut(s) 78
PfeI GAWTC 1 cut(s) 215
PkrI GCNGC 5 cut(s) 49, 52, 99, 127, 130
PleI GAGTC 6 cut(s) 68, 222, 275, 287, 289, 333
PpsI GAGTC 6 cut(s) 68, 222, 275, 287, 289, 333
PscI ACATGT 1 cut(s) 420
PspEI GGTNACC 1 cut(s) 432
PspN4I GGNNCC 3 cut(s) 39, 90, 510
PspPI GGNCC 1 cut(s) 194
RseI CAYNNNNRTG 2 cut(s) 351, 419
SaqAI TTAA 3 cut(s) 11, 315, 417
SatI GCNGC 5 cut(s) 48, 51, 98, 126, 129
Sau3AI GATC 1 cut(s) 258
Sau96I GGNCC 1 cut(s) 194
SchI GAGTC 6 cut(s) 68, 222, 276, 287, 290, 333
ScrFI CCNGG 1 cut(s) 86
SduI GDGCHC 2 cut(s) 60, 150
SetI ASST 8 cut(s) 207, 276, 366, 376, 390, 471, 499, 540
SmiMI CAYNNNNRTG 2 cut(s) 351, 419
SspMI CTAG 1 cut(s) 559
StyD4I CCNGG 1 cut(s) 84
TaiI ACGT 1 cut(s) 207
TaqI TCGA 3 cut(s) 72, 81, 456
TauI GCSGC 4 cut(s) 50, 53, 100, 128
TfiI GAWTC 1 cut(s) 215
Tru1I TTAA 3 cut(s) 11, 315, 417
Tru9I TTAA 3 cut(s) 11, 315, 417
TscAI CASTG 1 cut(s) 48
TseFI GTSAC 2 cut(s) 394, 500
TseI GCWGC 1 cut(s) 128
Tsp45I GTSAC 2 cut(s) 394, 500
TspRI CASTG 1 cut(s) 48
XceI RCATGY 2 cut(s) 154, 424
XspI CTAG 1 cut(s) 559
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.