Rmu_sc0010088.1_g000009

Adipocyte plasma membrane-associated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010088.1
OG0000797
Physical Location & Seq
Forward (+)
13232 .. 15350
2119 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010088.1_g000009.1.cds

Sequence Viewer

Length: 1056 bp
ctgtttctttcttctgggccgagctatcttcttctgctactgggttgtgctgatctccttctgcttctgggccagactgcttctgtttgttctgggctgggctacacagggcttaaggtagtggctggaaaagcaggcggcggttcaaaggtgaaacaggttttgatggccgatttggtatggcggtcggaggcggagggaaaggctttgaaccgggcaggggaacttctgtcacttctggaggctggttcggtgctttttccggcctgttctgggtgtggcaccgccagttctggactcctggagttgagagcttcaaggggggaggcggtgggactactgagaatagctgaggatggagcagtggagctgctaacggatgaggctgagggtgtaaaattcaagctaacagattgtgtagatgtagcgaaagatggtatgatttacttcacagatgcttcatatgaaaacggcttacaagacttcatctgggactttctagagggcagaccccatggtaggttactaagctacaatccgtttaccaaagagaccaaagtgctcattcgcaacctctactttgctaatggagtagcactctctccggatcagaattatgtgatcttctgcgaaactttcatgaaaagatgtagaaagtactacctacaaggcgagaagaaagggagcatagagaacttcattgacaacttgccaggctctccggataatatacgatatgatggggaaggccattactggatcgcaatacctatggggacttcagtttttttggatctatcacttaggtacccttttatccgaaaagggctggcaatcgtggagaagtatatagtgagcagaccatataaggagaagaattctggtgtacttgctgtgaacttggaaggggaacctactgcccattattttgatccagatttgtcactcattacaagtgggatcaagatcggaaactacctctactgtggctccgttctcaatccatacattatccgcctagatctggaacaacatcctgcacatgccactacatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0012505 GO:0016020 GO:0016787 GO:0016788 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Str_synth

Protein Analysis

351

Amino Acids

38.35

Weight (kDa)

5.52

Isoelectric Point (pI)

25.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 807
AccB1I GGYRCC 2 cut(s) 281, 807
AccIII TCCGGA 2 cut(s) 604, 721
AciI CCGC 7 cut(s) 138, 141, 184, 194, 285, 329, 1015
AclWI GGATC 5 cut(s) 615, 767, 801, 926, 968
AcoI YGGCCR 1 cut(s) 168
AcsI RAATTY 2 cut(s) 398, 877
AcuI CTGAAG 1 cut(s) 765
AfaI GTAC 3 cut(s) 659, 809, 888
AfiI CCNNNNNNNGG 4 cut(s) 220, 273, 519, 1024
AflII CTTAAG 1 cut(s) 113
AgsI TTSAA 4 cut(s) 147, 211, 318, 403
AjnI CCWGG 2 cut(s) 300, 712
AluBI AGCT 6 cut(s) 24, 314, 350, 370, 406, 531
AluI AGCT 6 cut(s) 24, 314, 350, 370, 406, 531
Alw21I GWGCWC 1 cut(s) 564
Alw26I GTCTC 1 cut(s) 545
AlwI GGATC 5 cut(s) 615, 767, 801, 926, 968
Aor13HI TCCGGA 2 cut(s) 604, 721
AoxI GGCC 5 cut(s) 17, 70, 168, 264, 748
ApeKI GCWGC 1 cut(s) 370
ApoI RAATTY 2 cut(s) 398, 877
Asp718I GGTACC 1 cut(s) 807
AspS9I GGNCC 2 cut(s) 17, 70
AsuC2I CCSGG 1 cut(s) 215
AsuHPI GGTGA 1 cut(s) 163
BaeI ACNNNNGTAYC 2 cut(s) 791, 824
BanI GGYRCC 2 cut(s) 281, 807
Bbv12I GWGCWC 1 cut(s) 564
BbvCI CCTCAGC 2 cut(s) 351, 387
BbvI GCAGC 1 cut(s) 357
BccI CCATC 4 cut(s) 160, 350, 428, 734
BceAI ACGGC 1 cut(s) 487
BciT130I CCWGG 2 cut(s) 302, 714
BcnI CCSGG 1 cut(s) 215
BcoDI GTCTC 1 cut(s) 545
BfaI CTAG 2 cut(s) 500, 1019
BfrI CTTAAG 1 cut(s) 113
BglII AGATCT 1 cut(s) 1021
BisI GCNGC 2 cut(s) 139, 371
BlsI GCNGC 2 cut(s) 140, 372
BmcAI AGTACT 1 cut(s) 659
Bme1390I CCNGG 3 cut(s) 215, 302, 714
BmgT120I GGNCC 2 cut(s) 17, 70
BmiI GGNNCC 4 cut(s) 283, 809, 912, 991
BmrFI CCNGG 3 cut(s) 215, 302, 714
BmrI ACTGGG 1 cut(s) 50
BmsI GCATC 1 cut(s) 445
BmuI ACTGGG 1 cut(s) 50
BplI GAGNNNNNCTC 2 cut(s) 582, 614
BpmI CTGGAG 2 cut(s) 260, 323
Bpu10I CCTNAGC 2 cut(s) 351, 387
BpuMI CCSGG 1 cut(s) 215
BsaBI GATNNNNATC 1 cut(s) 965
BsaI GGTCTC 1 cut(s) 545
BsaJI CCNNGG 1 cut(s) 514
BsaWI WCCGGW 2 cut(s) 604, 721
BsaXI ACNNNNNCTCC 2 cut(s) 974, 1004
Bsc4I CCNNNNNNNGG 4 cut(s) 220, 273, 519, 1024
Bse1I ACTGG 3 cut(s) 45, 288, 761
Bse8I GATNNNNATC 1 cut(s) 965
BseAI TCCGGA 2 cut(s) 604, 721
BseBI CCWGG 2 cut(s) 302, 714
BseDI CCNNGG 1 cut(s) 514
BseGI GGATG 3 cut(s) 361, 385, 1033
BseJI GATNNNNATC 1 cut(s) 965
BseLI CCNNNNNNNGG 4 cut(s) 220, 273, 519, 1024
BseMII CTCAG 3 cut(s) 332, 342, 378
BseNI ACTGG 3 cut(s) 45, 288, 761
BseXI GCAGC 1 cut(s) 357
BseYI CCCAGC 1 cut(s) 97
BsgI GTGCAG 1 cut(s) 1023
Bsh1285I CGRYCG 1 cut(s) 188
BshFI GGCC 5 cut(s) 19, 72, 170, 266, 750
BshNI GGYRCC 2 cut(s) 281, 807
BsiEI CGRYCG 1 cut(s) 188
BsiHKAI GWGCWC 1 cut(s) 564
BsiSI CCGG 4 cut(s) 214, 263, 605, 722
BslFI GGGAC 3 cut(s) 348, 506, 790
BslI CCNNNNNNNGG 4 cut(s) 220, 273, 519, 1024
BsmAI GTCTC 1 cut(s) 545
BsmFI GGGAC 3 cut(s) 348, 506, 790
BsnI GGCC 5 cut(s) 19, 72, 170, 266, 750
Bso31I GGTCTC 1 cut(s) 545
Bsp1286I GDGCHC 1 cut(s) 564
Bsp13I TCCGGA 2 cut(s) 604, 721
Bsp143I GATC 9 cut(s) 52, 607, 621, 759, 793, 931, 960, 966, 1021
Bsp19I CCATGG 1 cut(s) 514
BspACI CCGC 7 cut(s) 138, 141, 184, 194, 285, 329, 1015
BspANI GGCC 5 cut(s) 19, 72, 170, 266, 750
BspCNI CTCAG 3 cut(s) 333, 343, 379
BspEI TCCGGA 2 cut(s) 604, 721
BspHI TCATGA 1 cut(s) 639
BspLI GGNNCC 4 cut(s) 283, 809, 912, 991
BspPI GGATC 5 cut(s) 615, 767, 801, 926, 968
BspT107I GGYRCC 2 cut(s) 281, 807
BspTI CTTAAG 1 cut(s) 113
BspTNI GGTCTC 1 cut(s) 545
BsrI ACTGG 3 cut(s) 45, 288, 761
BssECI CCNNGG 1 cut(s) 514
BssMI GATC 9 cut(s) 52, 607, 621, 759, 793, 931, 960, 966, 1021
BssT1I CCWWGG 1 cut(s) 514
Bst2UI CCWGG 2 cut(s) 302, 714
Bst4CI ACNGT 1 cut(s) 986
BstAFI CTTAAG 1 cut(s) 113
BstC8I GCNNGC 2 cut(s) 136, 831
BstDEI CTNAG 5 cut(s) 341, 351, 387, 527, 803
BstDSI CCRYGG 1 cut(s) 514
BstF5I GGATG 3 cut(s) 361, 385, 1033
BstKTI GATC 9 cut(s) 55, 610, 624, 762, 796, 934, 963, 969, 1024
BstMAI GTCTC 1 cut(s) 545
BstMBI GATC 9 cut(s) 52, 607, 621, 759, 793, 931, 960, 966, 1021
BstMCI CGRYCG 1 cut(s) 188
BstMWI GCNNNNNNNGC 1 cut(s) 131
BstNI CCWGG 2 cut(s) 302, 714
BstNSI RCATGY 1 cut(s) 1046
BstSCI CCNGG 3 cut(s) 213, 300, 712
BstV1I GCAGC 1 cut(s) 357
BstX2I RGATCY 2 cut(s) 793, 1021
BstYI RGATCY 2 cut(s) 793, 1021
BsuRI GGCC 5 cut(s) 19, 72, 170, 266, 750
BtgI CCRYGG 1 cut(s) 514
BtsCI GGATG 3 cut(s) 361, 385, 1033
BtsI GCAGTG 1 cut(s) 369
BtsIMutI CAGTG 1 cut(s) 369
Cac8I GCNNGC 2 cut(s) 136, 831
CciI TCATGA 1 cut(s) 639
Cfr13I GGNCC 2 cut(s) 17, 70
Csp6I GTAC 3 cut(s) 658, 808, 887
CviAII CATG 4 cut(s) 515, 640, 1043, 1053
CviQI GTAC 3 cut(s) 658, 808, 887
DdeI CTNAG 5 cut(s) 341, 351, 387, 527, 803
DpnI GATC 9 cut(s) 54, 609, 623, 761, 795, 933, 962, 968, 1023
DpnII GATC 9 cut(s) 52, 607, 621, 759, 793, 931, 960, 966, 1021
EaeI YGGCCR 1 cut(s) 168
EciI GGCGGA 2 cut(s) 209, 1004
Eco130I CCWWGG 1 cut(s) 514
Eco31I GGTCTC 1 cut(s) 545
Eco57I CTGAAG 1 cut(s) 765
EcoRI GAATTC 1 cut(s) 877
EcoRII CCWGG 2 cut(s) 300, 712
EcoT14I CCWWGG 1 cut(s) 514
ErhI CCWWGG 1 cut(s) 514
FaeI CATG 4 cut(s) 518, 643, 1046, 1056
FaqI GGGAC 3 cut(s) 348, 506, 790
FatI CATG 4 cut(s) 514, 639, 1042, 1052
FauNDI CATATG 1 cut(s) 463
Fnu4HI GCNGC 2 cut(s) 139, 371
FokI GGATG 3 cut(s) 368, 392, 1020
Fsp4HI GCNGC 2 cut(s) 139, 371
FspBI CTAG 2 cut(s) 500, 1019
GluI GCNGC 2 cut(s) 139, 371
GsaI CCCAGC 1 cut(s) 101
GsuI CTGGAG 2 cut(s) 260, 323
HaeIII GGCC 5 cut(s) 19, 72, 170, 266, 750
HapII CCGG 4 cut(s) 214, 263, 605, 722
Hin1II CATG 4 cut(s) 518, 643, 1046, 1056
HinfI GANTC 1 cut(s) 297
HpaII CCGG 4 cut(s) 214, 263, 605, 722
HphI GGTGA 1 cut(s) 163
Hpy166II GTNNAC 3 cut(s) 543, 887, 898
Hpy188I TCNGA 4 cut(s) 190, 612, 821, 971
Hpy188III TCNNGA 9 cut(s) 239, 294, 500, 605, 640, 722, 935, 964, 1025
Hpy8I GTNNAC 3 cut(s) 543, 887, 898
HpyAV CCTTC 3 cut(s) 68, 740, 899
HpyCH4III ACNGT 1 cut(s) 986
HpyCH4V TGCA 1 cut(s) 1040
HpyF10VI GCNNNNNNNGC 1 cut(s) 131
HpyF3I CTNAG 5 cut(s) 341, 351, 387, 527, 803
Hsp92II CATG 4 cut(s) 518, 643, 1046, 1056
Kpn2I TCCGGA 2 cut(s) 604, 721
KpnI GGTACC 1 cut(s) 811
Kzo9I GATC 9 cut(s) 52, 607, 621, 759, 793, 931, 960, 966, 1021
LmnI GCTCC 4 cut(s) 359, 367, 684, 995
Lsp1109I GCAGC 1 cut(s) 357
LweI GCATC 1 cut(s) 445
MaeI CTAG 2 cut(s) 500, 1019
MaeIII GTNAC 3 cut(s) 231, 522, 942
MalI GATC 9 cut(s) 54, 609, 623, 761, 795, 933, 962, 968, 1023
MboI GATC 9 cut(s) 52, 607, 621, 759, 793, 931, 960, 966, 1021
MboII GAAGA 6 cut(s) 3, 20, 23, 616, 688, 886
MflI RGATCY 2 cut(s) 793, 1021
MhlI GDGCHC 1 cut(s) 564
MluCI AATT 3 cut(s) 398, 613, 877
MlyI GAGTC 1 cut(s) 291
MmeI TCCRAC 1 cut(s) 168
MroI TCCGGA 2 cut(s) 604, 721
MseI TTAA 1 cut(s) 114
MspCI CTTAAG 1 cut(s) 113
MspI CCGG 4 cut(s) 214, 263, 605, 722
MspR9I CCNGG 3 cut(s) 215, 302, 714
MvaI CCWGG 2 cut(s) 302, 714
MwoI GCNNNNNNNGC 1 cut(s) 131
NciI CCSGG 1 cut(s) 215
NcoI CCATGG 1 cut(s) 514
NdeI CATATG 1 cut(s) 463
NdeII GATC 9 cut(s) 52, 607, 621, 759, 793, 931, 960, 966, 1021
NlaIII CATG 4 cut(s) 518, 643, 1046, 1056
NlaIV GGNNCC 4 cut(s) 283, 809, 912, 991
NmeAIII GCCGAG 1 cut(s) 45
NmuCI GTSAC 2 cut(s) 231, 942
NspI RCATGY 1 cut(s) 1046
PagI TCATGA 1 cut(s) 639
PfoI TCCNGGA 1 cut(s) 300
PkrI GCNGC 2 cut(s) 140, 372
PleI GAGTC 1 cut(s) 291
PpsI GAGTC 1 cut(s) 291
Psp6I CCWGG 2 cut(s) 300, 712
PspFI CCCAGC 1 cut(s) 97
PspGI CCWGG 2 cut(s) 300, 712
PspN4I GGNNCC 4 cut(s) 283, 809, 912, 991
PspPI GGNCC 2 cut(s) 17, 70
PsuI RGATCY 2 cut(s) 793, 1021
RsaI GTAC 3 cut(s) 659, 809, 888
RsaNI GTAC 3 cut(s) 658, 808, 887
SaqAI TTAA 1 cut(s) 114
SatI GCNGC 2 cut(s) 139, 371
Sau3AI GATC 9 cut(s) 52, 607, 621, 759, 793, 931, 960, 966, 1021
Sau96I GGNCC 2 cut(s) 17, 70
ScaI AGTACT 1 cut(s) 659
SchI GAGTC 1 cut(s) 291
ScrFI CCNGG 3 cut(s) 215, 302, 714
SduI GDGCHC 1 cut(s) 564
SfaNI GCATC 1 cut(s) 445
SmlI CTYRAG 1 cut(s) 113
SmoI CTYRAG 1 cut(s) 113
Sse9I AATT 3 cut(s) 398, 613, 877
SsiI CCGC 7 cut(s) 138, 141, 184, 194, 285, 329, 1015
SspMI CTAG 2 cut(s) 500, 1019
StyD4I CCNGG 3 cut(s) 213, 300, 712
StyI CCWWGG 1 cut(s) 514
TaaI ACNGT 1 cut(s) 986
TasI AATT 3 cut(s) 398, 613, 877
TatI WGTACW 2 cut(s) 657, 886
TauI GCSGC 1 cut(s) 141
Tru1I TTAA 1 cut(s) 114
Tru9I TTAA 1 cut(s) 114
TscAI CASTG 1 cut(s) 369
TseFI GTSAC 2 cut(s) 231, 942
TseI GCWGC 1 cut(s) 370
Tsp45I GTSAC 2 cut(s) 231, 942
TspDTI ATGAA 6 cut(s) 450, 475, 480, 628, 656, 688
TspGWI ACGGA 3 cut(s) 392, 528, 982
TspRI CASTG 1 cut(s) 369
Vha464I CTTAAG 1 cut(s) 113
XapI RAATTY 2 cut(s) 398, 877
XbaI TCTAGA 1 cut(s) 499
XceI RCATGY 1 cut(s) 1046
XspI CTAG 2 cut(s) 500, 1019
ZrmI AGTACT 1 cut(s) 659
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.