Rmu_sc0010088.1_g000002

Adipocyte plasma membrane-associated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010088.1
OG0000797
Physical Location & Seq
Forward (+)
2151 .. 3595
1445 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010088.1_g000002.1.cds

Sequence Viewer

Length: 627 bp
atggccgtcttaaacactctctttttctcaatactggttccagtggcggcggctgtgctcctctaccagctcgactcgttcgacccggctcctctgccgcttcacgagttgagtgagcaagtcgcggctgccccgaggcgtaatggtcacatgctcaaagggtcggagtttttgggtgttgggactttagcagggccagaagacgttgcttatgattccaagtcgggactcatttacacgggatgtgcggacgggtggatcatgcgagtcaagctgaacgagtcggctgatgactcggtggtggagaactgggttaataccggcgggagaccactcggactcactcacgaacatggcggaaagcttttggtagctgacgcggaaaaggtcagcgtcacttactctcctcaacattatcatgtttctttgtttttggtctggttaccactcttcctcttttgcttcgatgtcctcaacctcttcactctccggccaccaccgccacctcgtcacaaggctccccaccaccgcgaccaccatgaccacctccaaaacaaaccacctccattccccaaagacaccttagatttcccctcacaagtatttcaagctcttttgcttctataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0012505 GO:0016020 GO:0016787 GO:0016788 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Str_synth

Protein Analysis

208

Amino Acids

23.04

Weight (kDa)

6.02

Isoelectric Point (pI)

45.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 3 cut(s) 125, 380, 531
AclWI GGATC 1 cut(s) 266
AcoI YGGCCR 2 cut(s) 3, 491
AgsI TTSAA 1 cut(s) 608
AluBI AGCT 5 cut(s) 70, 274, 364, 374, 611
AluI AGCT 5 cut(s) 70, 274, 364, 374, 611
Alw21I GWGCWC 1 cut(s) 60
Alw26I GTCTC 1 cut(s) 322
AlwI GGATC 1 cut(s) 266
Ama87I CYCGRG 1 cut(s) 133
AoxI GGCC 3 cut(s) 3, 194, 491
ApeKI GCWGC 1 cut(s) 128
AspS9I GGNCC 1 cut(s) 194
AsuC2I CCSGG 1 cut(s) 86
AvaI CYCGRG 1 cut(s) 133
BauI CACGAG 1 cut(s) 104
BbsI GAAGAC 1 cut(s) 207
Bbv12I GWGCWC 1 cut(s) 60
BbvI GCAGC 1 cut(s) 115
BcnI CCSGG 1 cut(s) 86
BcoDI GTCTC 1 cut(s) 322
BisI GCNGC 5 cut(s) 48, 51, 98, 126, 129
BlsI GCNGC 5 cut(s) 49, 52, 99, 127, 130
Bme1390I CCNGG 1 cut(s) 86
BmeT110I CYCGRG 1 cut(s) 133
BmgT120I GGNCC 1 cut(s) 194
BmiI GGNNCC 3 cut(s) 39, 90, 519
BmrFI CCNGG 1 cut(s) 86
BmrI ACTGGG 1 cut(s) 319
BmuI ACTGGG 1 cut(s) 319
BpiI GAAGAC 1 cut(s) 207
BpuMI CCSGG 1 cut(s) 86
BsaI GGTCTC 1 cut(s) 322
BsaJI CCNNGG 1 cut(s) 134
BsaXI ACNNNNNCTCC 2 cut(s) 388, 418
Bse118I RCCGGY 1 cut(s) 320
Bse1I ACTGG 3 cut(s) 39, 41, 314
BseDI CCNNGG 1 cut(s) 134
BseGI GGATG 1 cut(s) 248
BseNI ACTGG 3 cut(s) 39, 41, 314
BseRI GAGGAG 3 cut(s) 50, 81, 396
BseXI GCAGC 1 cut(s) 115
Bsh1236I CGCG 3 cut(s) 125, 380, 531
BshFI GGCC 3 cut(s) 5, 196, 493
BsiHKAI GWGCWC 1 cut(s) 60
BsiHKCI CYCGRG 1 cut(s) 133
BsiSI CCGG 3 cut(s) 86, 321, 490
BslFI GGGAC 2 cut(s) 196, 240
BsmAI GTCTC 1 cut(s) 322
BsmFI GGGAC 2 cut(s) 196, 240
BsnI GGCC 3 cut(s) 5, 196, 493
Bso31I GGTCTC 1 cut(s) 322
BsoBI CYCGRG 1 cut(s) 133
Bsp1286I GDGCHC 1 cut(s) 60
Bsp143I GATC 1 cut(s) 258
BspANI GGCC 3 cut(s) 5, 196, 493
BspFNI CGCG 3 cut(s) 125, 380, 531
BspLI GGNNCC 3 cut(s) 39, 90, 519
BspPI GGATC 1 cut(s) 266
BspTNI GGTCTC 1 cut(s) 322
BsrFI RCCGGY 1 cut(s) 320
BsrI ACTGG 3 cut(s) 39, 41, 314
BssAI RCCGGY 1 cut(s) 320
BssECI CCNNGG 1 cut(s) 134
BssMI GATC 1 cut(s) 258
BssSI CACGAG 1 cut(s) 104
Bst2BI CACGAG 1 cut(s) 104
Bst6I CTCTTC 2 cut(s) 455, 485
BstDEI CTNAG 1 cut(s) 583
BstEII GGTNACC 1 cut(s) 441
BstF5I GGATG 1 cut(s) 248
BstFNI CGCG 3 cut(s) 125, 380, 531
BstKTI GATC 1 cut(s) 261
BstMAI GTCTC 1 cut(s) 322
BstMBI GATC 1 cut(s) 258
BstMWI GCNNNNNNNGC 2 cut(s) 271, 499
BstNSI RCATGY 1 cut(s) 154
BstPI GGTNACC 1 cut(s) 441
BstSCI CCNGG 1 cut(s) 84
BstUI CGCG 3 cut(s) 125, 380, 531
BstV1I GCAGC 1 cut(s) 115
BstV2I GAAGAC 1 cut(s) 207
BsuRI GGCC 3 cut(s) 5, 196, 493
BtsCI GGATG 1 cut(s) 248
BtsIMutI CAGTG 1 cut(s) 48
Cfr10I RCCGGY 1 cut(s) 320
Cfr13I GGNCC 1 cut(s) 194
CseI GACGC 2 cut(s) 382, 386
CviAII CATG 5 cut(s) 151, 262, 353, 419, 539
DdeI CTNAG 1 cut(s) 583
DpnI GATC 1 cut(s) 260
DpnII GATC 1 cut(s) 258
EaeI YGGCCR 2 cut(s) 3, 491
Eam1104I CTCTTC 2 cut(s) 455, 485
EarI CTCTTC 2 cut(s) 455, 485
EciI GGCGGA 1 cut(s) 372
Eco31I GGTCTC 1 cut(s) 322
Eco88I CYCGRG 1 cut(s) 133
Eco91I GGTNACC 1 cut(s) 441
EcoO65I GGTNACC 1 cut(s) 441
FaeI CATG 5 cut(s) 154, 265, 356, 422, 542
FaiI YATR 7 cut(s) 152, 213, 263, 354, 420, 540, 625
FaqI GGGAC 2 cut(s) 196, 240
FatI CATG 5 cut(s) 150, 261, 352, 418, 538
FauI CCCGC 1 cut(s) 317
Fnu4HI GCNGC 5 cut(s) 48, 51, 98, 126, 129
FokI GGATG 1 cut(s) 255
Fsp4HI GCNGC 5 cut(s) 48, 51, 98, 126, 129
GluI GCNGC 5 cut(s) 48, 51, 98, 126, 129
HaeIII GGCC 3 cut(s) 5, 196, 493
HapII CCGG 3 cut(s) 86, 321, 490
HgaI GACGC 2 cut(s) 382, 386
Hin1II CATG 5 cut(s) 154, 265, 356, 422, 542
HindIII AAGCTT 1 cut(s) 362
HinfI GANTC 7 cut(s) 74, 215, 228, 267, 281, 293, 339
HpaII CCGG 3 cut(s) 86, 321, 490
Hpy188I TCNGA 2 cut(s) 166, 338
Hpy188III TCNNGA 3 cut(s) 104, 225, 347
HpyCH4IV ACGT 1 cut(s) 204
HpyF10VI GCNNNNNNNGC 2 cut(s) 271, 499
HpyF3I CTNAG 1 cut(s) 583
HpySE526I ACGT 1 cut(s) 204
Hsp92II CATG 5 cut(s) 154, 265, 356, 422, 542
Kzo9I GATC 1 cut(s) 258
LmnI GCTCC 3 cut(s) 63, 94, 523
Lsp1109I GCAGC 1 cut(s) 115
MaeII ACGT 1 cut(s) 204
MaeIII GTNAC 4 cut(s) 146, 394, 441, 509
MalI GATC 1 cut(s) 260
MboI GATC 1 cut(s) 258
MboII GAAGA 3 cut(s) 212, 442, 472
MhlI GDGCHC 1 cut(s) 60
MlyI GAGTC 6 cut(s) 68, 222, 276, 287, 290, 333
MmeI TCCRAC 1 cut(s) 144
MseI TTAA 2 cut(s) 11, 315
MslI CAYNNNNRTG 2 cut(s) 351, 417
MspI CCGG 3 cut(s) 86, 321, 490
MspR9I CCNGG 1 cut(s) 86
MvnI CGCG 3 cut(s) 125, 380, 531
MwoI GCNNNNNNNGC 2 cut(s) 271, 499
NciI CCSGG 1 cut(s) 86
NdeII GATC 1 cut(s) 258
NlaIII CATG 5 cut(s) 154, 265, 356, 422, 542
NlaIV GGNNCC 3 cut(s) 39, 90, 519
NmuCI GTSAC 3 cut(s) 146, 394, 509
NspI RCATGY 1 cut(s) 154
PcsI WCGNNNNNNNCGW 1 cut(s) 78
PfeI GAWTC 1 cut(s) 215
PkrI GCNGC 5 cut(s) 49, 52, 99, 127, 130
PleI GAGTC 6 cut(s) 68, 222, 275, 287, 289, 333
PpsI GAGTC 6 cut(s) 68, 222, 275, 287, 289, 333
PspEI GGTNACC 1 cut(s) 441
PspN4I GGNNCC 3 cut(s) 39, 90, 519
PspPI GGNCC 1 cut(s) 194
RseI CAYNNNNRTG 2 cut(s) 351, 417
SaqAI TTAA 2 cut(s) 11, 315
SatI GCNGC 5 cut(s) 48, 51, 98, 126, 129
Sau3AI GATC 1 cut(s) 258
Sau96I GGNCC 1 cut(s) 194
SchI GAGTC 6 cut(s) 68, 222, 276, 287, 290, 333
ScrFI CCNGG 1 cut(s) 86
SduI GDGCHC 1 cut(s) 60
SmiMI CAYNNNNRTG 2 cut(s) 351, 417
StyD4I CCNGG 1 cut(s) 84
TaiI ACGT 1 cut(s) 207
TaqI TCGA 3 cut(s) 72, 81, 465
TauI GCSGC 4 cut(s) 50, 53, 100, 128
TfiI GAWTC 1 cut(s) 215
Tru1I TTAA 2 cut(s) 11, 315
Tru9I TTAA 2 cut(s) 11, 315
TscAI CASTG 1 cut(s) 48
TseFI GTSAC 3 cut(s) 146, 394, 509
TseI GCWGC 1 cut(s) 128
Tsp45I GTSAC 3 cut(s) 146, 394, 509
TspRI CASTG 1 cut(s) 48
XceI RCATGY 1 cut(s) 154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.