Auxin responsive protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Auxin_inducible | PF02519 | 9 - 110 | 5e-24 | Auxin responsive protein |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 157, 406 |
| AfaI | GTAC | 1 cut(s) | 127 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 101 |
| AgsI | TTSAA | 1 cut(s) | 230 |
| AluBI | AGCT | 5 cut(s) | 31, 65, 235, 368, 396 |
| AluI | AGCT | 5 cut(s) | 31, 65, 235, 368, 396 |
| Alw21I | GWGCWC | 1 cut(s) | 18 |
| Alw26I | GTCTC | 1 cut(s) | 328 |
| Ama87I | CYCGRG | 1 cut(s) | 94 |
| ApeKI | GCWGC | 2 cut(s) | 196, 396 |
| ApoI | RAATTY | 2 cut(s) | 157, 406 |
| AsuHPI | GGTGA | 1 cut(s) | 154 |
| AvaI | CYCGRG | 1 cut(s) | 94 |
| Bbv12I | GWGCWC | 1 cut(s) | 18 |
| BbvI | GCAGC | 2 cut(s) | 183, 383 |
| BceAI | ACGGC | 1 cut(s) | 184 |
| BcoDI | GTCTC | 1 cut(s) | 328 |
| BfmI | CTRYAG | 2 cut(s) | 351, 437 |
| BisI | GCNGC | 2 cut(s) | 197, 397 |
| BlpI | GCTNAGC | 1 cut(s) | 17 |
| BlsI | GCNGC | 2 cut(s) | 198, 398 |
| BmeT110I | CYCGRG | 1 cut(s) | 94 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 17 |
| BpuEI | CTTGAG | 2 cut(s) | 224, 253 |
| BsaI | GGTCTC | 1 cut(s) | 328 |
| BsaJI | CCNNGG | 1 cut(s) | 337 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 101 |
| Bse3DI | GCAATG | 1 cut(s) | 287 |
| BseDI | CCNNGG | 1 cut(s) | 337 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 101 |
| BseMI | GCAATG | 1 cut(s) | 287 |
| BseMII | CTCAG | 1 cut(s) | 31 |
| BseXI | GCAGC | 2 cut(s) | 183, 383 |
| BsiHKAI | GWGCWC | 1 cut(s) | 18 |
| BsiHKCI | CYCGRG | 1 cut(s) | 94 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 101 |
| BsmAI | GTCTC | 1 cut(s) | 328 |
| Bso31I | GGTCTC | 1 cut(s) | 328 |
| BsoBI | CYCGRG | 1 cut(s) | 94 |
| Bsp1286I | GDGCHC | 1 cut(s) | 18 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 17 |
| BspCNI | CTCAG | 1 cut(s) | 30 |
| BspHI | TCATGA | 1 cut(s) | 309 |
| BspTNI | GGTCTC | 1 cut(s) | 328 |
| BsrDI | GCAATG | 1 cut(s) | 287 |
| BssECI | CCNNGG | 1 cut(s) | 337 |
| Bst4CI | ACNGT | 2 cut(s) | 352, 441 |
| Bst6I | CTCTTC | 2 cut(s) | 53, 249 |
| BstDEI | CTNAG | 2 cut(s) | 17, 249 |
| BstMAI | GTCTC | 1 cut(s) | 328 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 193 |
| BstSFI | CTRYAG | 2 cut(s) | 351, 437 |
| BstV1I | GCAGC | 2 cut(s) | 183, 383 |
| CciI | TCATGA | 1 cut(s) | 309 |
| Csp6I | GTAC | 1 cut(s) | 126 |
| CviAII | CATG | 3 cut(s) | 294, 310, 319 |
| CviJI | RGCY | 8 cut(s) | 21, 31, 65, 235, 280, 368, 396, 435 |
| CviKI_1 | RGCY | 8 cut(s) | 21, 31, 65, 235, 280, 368, 396, 435 |
| CviQI | GTAC | 1 cut(s) | 126 |
| DdeI | CTNAG | 2 cut(s) | 17, 249 |
| Eam1104I | CTCTTC | 2 cut(s) | 53, 249 |
| EarI | CTCTTC | 2 cut(s) | 53, 249 |
| Eco31I | GGTCTC | 1 cut(s) | 328 |
| Eco32I | GATATC | 1 cut(s) | 246 |
| Eco88I | CYCGRG | 1 cut(s) | 94 |
| EcoRI | GAATTC | 1 cut(s) | 406 |
| EcoRV | GATATC | 1 cut(s) | 246 |
| FaeI | CATG | 3 cut(s) | 297, 313, 322 |
| FatI | CATG | 3 cut(s) | 293, 309, 318 |
| Fnu4HI | GCNGC | 2 cut(s) | 197, 397 |
| Fsp4HI | GCNGC | 2 cut(s) | 197, 397 |
| GluI | GCNGC | 2 cut(s) | 197, 397 |
| Hin1II | CATG | 3 cut(s) | 297, 313, 322 |
| HincII | GTYRAC | 1 cut(s) | 334 |
| HindII | GTYRAC | 1 cut(s) | 334 |
| HindIII | AAGCTT | 1 cut(s) | 366 |
| HinfI | GANTC | 3 cut(s) | 5, 264, 299 |
| HphI | GGTGA | 1 cut(s) | 154 |
| Hpy166II | GTNNAC | 2 cut(s) | 334, 416 |
| Hpy188III | TCNNGA | 3 cut(s) | 230, 241, 310 |
| Hpy8I | GTNNAC | 2 cut(s) | 334, 416 |
| HpyAV | CCTTC | 1 cut(s) | 95 |
| HpyCH4III | ACNGT | 2 cut(s) | 352, 441 |
| HpyCH4V | TGCA | 1 cut(s) | 89 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 193 |
| HpyF3I | CTNAG | 2 cut(s) | 17, 249 |
| Hsp92II | CATG | 3 cut(s) | 297, 313, 322 |
| Lsp1109I | GCAGC | 2 cut(s) | 183, 383 |
| MaeIII | GTNAC | 2 cut(s) | 441, 455 |
| MboII | GAAGA | 2 cut(s) | 70, 266 |
| MfeI | CAATTG | 1 cut(s) | 84 |
| MhlI | GDGCHC | 1 cut(s) | 18 |
| MluCI | AATT | 4 cut(s) | 84, 157, 376, 406 |
| MlyI | GAGTC | 1 cut(s) | 258 |
| MnlI | CCTC | 2 cut(s) | 177, 332 |
| MseI | TTAA | 1 cut(s) | 36 |
| MslI | CAYNNNNRTG | 1 cut(s) | 292 |
| MunI | CAATTG | 1 cut(s) | 84 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 193 |
| NlaIII | CATG | 3 cut(s) | 297, 313, 322 |
| PagI | TCATGA | 1 cut(s) | 309 |
| PfeI | GAWTC | 1 cut(s) | 299 |
| PkrI | GCNGC | 2 cut(s) | 198, 398 |
| PleI | GAGTC | 1 cut(s) | 258 |
| PpsI | GAGTC | 1 cut(s) | 258 |
| RsaI | GTAC | 1 cut(s) | 127 |
| RsaNI | GTAC | 1 cut(s) | 126 |
| RseI | CAYNNNNRTG | 1 cut(s) | 292 |
| SaqAI | TTAA | 1 cut(s) | 36 |
| SatI | GCNGC | 2 cut(s) | 197, 397 |
| SchI | GAGTC | 1 cut(s) | 258 |
| SduI | GDGCHC | 1 cut(s) | 18 |
| SetI | ASST | 7 cut(s) | 33, 67, 106, 237, 343, 370, 398 |
| SfcI | CTRYAG | 2 cut(s) | 351, 437 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 292 |
| SmlI | CTYRAG | 2 cut(s) | 239, 268 |
| SmoI | CTYRAG | 2 cut(s) | 239, 268 |
| Sse9I | AATT | 4 cut(s) | 84, 157, 376, 406 |
| TaaI | ACNGT | 2 cut(s) | 352, 441 |
| TasI | AATT | 4 cut(s) | 84, 157, 376, 406 |
| TatI | WGTACW | 1 cut(s) | 125 |
| TfiI | GAWTC | 1 cut(s) | 299 |
| Tru1I | TTAA | 1 cut(s) | 36 |
| Tru9I | TTAA | 1 cut(s) | 36 |
| TseI | GCWGC | 2 cut(s) | 196, 396 |
| TspDTI | ATGAA | 5 cut(s) | 62, 291, 298, 326, 419 |
| TspGWI | ACGGA | 1 cut(s) | 374 |
| XapI | RAATTY | 2 cut(s) | 157, 406 |