L-threonine ammonia-lyase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| gag-asp_proteas | PF13975 | 120 - 209 | 1.5e-08 | gag-polyprotein putative aspartyl protease |
| RVP_2 | PF08284 | 122 - 211 | 1.6e-06 | Retroviral aspartyl protease |
| Asp_protease_2 | PF13650 | 123 - 205 | 2.7e-06 | Aspartyl protease |
| RVT_1 | PF00078 | 357 - 517 | 1.1e-40 | Reverse transcriptase (RNA-dependent DNA polymerase) |
| RT_RNaseH_2 | PF17919 | 579 - 673 | 7e-30 | RNase H-like domain found in reverse transcriptase |
| RT_RNaseH | PF17917 | 604 - 703 | 2.5e-30 | RNase H-like domain found in reverse transcriptase |
| Integrase_H2C2 | PF17921 | 791 - 844 | 1.7e-19 | Integrase zinc binding domain |
| rve | PF00665 | 869 - 960 | 9.6e-07 | Integrase core domain |
| SH3_Tf2-1 | PF24626 | 1077 - 1140 | 1.8e-24 | Tf2-1-like, SH3 domain |
| Chromo | PF00385 | 1165 - 1209 | 8.1e-07 | Chromo (CHRromatin Organisation MOdifier) domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 2 cut(s) | 447, 536 |
| AatII | GACGTC | 1 cut(s) | 2160 |
| Acc65I | GGTACC | 1 cut(s) | 552 |
| AccB1I | GGYRCC | 1 cut(s) | 552 |
| AccI | GTMKAC | 1 cut(s) | 1739 |
| AccII | CGCG | 3 cut(s) | 2796, 3129, 3216 |
| AciI | CCGC | 9 cut(s) | 762, 1030, 1237, 1652, 1848, 2570, 3056, 3059, 3127 |
| AclWI | GGATC | 4 cut(s) | 823, 2792, 2799, 3342 |
| AcoI | YGGCCR | 4 cut(s) | 219, 1500, 2686, 3615 |
| AcsI | RAATTY | 7 cut(s) | 415, 1382, 1678, 2229, 2349, 2396, 3218 |
| AcuI | CTGAAG | 2 cut(s) | 471, 2060 |
| AcvI | CACGTG | 1 cut(s) | 2249 |
| AcyI | GRCGYC | 1 cut(s) | 2157 |
| AflII | CTTAAG | 1 cut(s) | 709 |
| AflIII | ACRYGT | 2 cut(s) | 465, 1369 |
| AgeI | ACCGGT | 1 cut(s) | 1057 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 286 |
| AjnI | CCWGG | 7 cut(s) | 519, 1170, 1851, 2131, 2655, 3082, 3590 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 1496, 1528, 1715, 1747, 3210, 3242, 3469, 3501 |
| Alw21I | GWGCWC | 2 cut(s) | 1170, 2925 |
| AlwI | GGATC | 4 cut(s) | 823, 2792, 2799, 3342 |
| ApeKI | GCWGC | 8 cut(s) | 171, 580, 700, 718, 835, 1745, 2507, 2720 |
| ApoI | RAATTY | 7 cut(s) | 415, 1382, 1678, 2229, 2349, 2396, 3218 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2770, 2802 |
| AseI | ATTAAT | 2 cut(s) | 2547, 3483 |
| AsiGI | ACCGGT | 1 cut(s) | 1057 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2828 |
| Asp718I | GGTACC | 1 cut(s) | 552 |
| AspLEI | GCGC | 2 cut(s) | 616, 3075 |
| AsuC2I | CCSGG | 3 cut(s) | 2556, 3392, 3667 |
| AvaII | GGWCC | 7 cut(s) | 107, 123, 186, 280, 733, 1328, 3317 |
| AxyI | CCTNAGG | 1 cut(s) | 1631 |
| BalI | TGGCCA | 4 cut(s) | 221, 1502, 2688, 3617 |
| BanI | GGYRCC | 1 cut(s) | 552 |
| BanII | GRGCYC | 2 cut(s) | 154, 1170 |
| BbrPI | CACGTG | 1 cut(s) | 2249 |
| BbsI | GAAGAC | 1 cut(s) | 777 |
| Bbv12I | GWGCWC | 2 cut(s) | 1170, 2925 |
| BbvCI | CCTCAGC | 1 cut(s) | 1749 |
| BbvI | GCAGC | 8 cut(s) | 158, 567, 687, 730, 822, 1732, 2494, 2707 |
| BceAI | ACGGC | 5 cut(s) | 721, 940, 1850, 2733, 3662 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 2165, 2199, 2204, 2238, 3052, 3086 |
| BciT130I | CCWGG | 7 cut(s) | 521, 1172, 1853, 2133, 2657, 3084, 3592 |
| BciVI | GTATCC | 1 cut(s) | 40 |
| BclI | TGATCA | 2 cut(s) | 907, 2515 |
| BcnI | CCSGG | 3 cut(s) | 2556, 3392, 3667 |
| BfaI | CTAG | 7 cut(s) | 18, 608, 623, 723, 1643, 2475, 2597 |
| BfmI | CTRYAG | 2 cut(s) | 525, 1417 |
| BfrI | CTTAAG | 1 cut(s) | 709 |
| BfuI | GTATCC | 1 cut(s) | 40 |
| Bme18I | GGWCC | 7 cut(s) | 107, 123, 186, 280, 733, 1328, 3317 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 286 |
| BmiI | GGNNCC | 7 cut(s) | 125, 554, 1864, 2848, 3088, 3319, 3664 |
| BmrI | ACTGGG | 5 cut(s) | 455, 600, 935, 2111, 2989 |
| BmsI | GCATC | 9 cut(s) | 481, 1252, 1744, 1894, 2146, 3015, 3060, 3121, 3574 |
| BmuI | ACTGGG | 5 cut(s) | 455, 600, 935, 2111, 2989 |
| BpiI | GAAGAC | 1 cut(s) | 777 |
| BpmI | CTGGAG | 2 cut(s) | 2149, 3383 |
| Bpu10I | CCTNAGC | 2 cut(s) | 831, 1749 |
| BpuEI | CTTGAG | 7 cut(s) | 981, 1472, 1472, 1700, 1754, 2830, 3642 |
| BpuMI | CCSGG | 3 cut(s) | 2556, 3392, 3667 |
| Bsa29I | ATCGAT | 1 cut(s) | 2667 |
| BsaAI | YACGTR | 2 cut(s) | 2249, 2438 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2796, 3201 |
| BsaHI | GRCGYC | 1 cut(s) | 2157 |
| BsaI | GGTCTC | 5 cut(s) | 455, 1322, 1981, 2729, 3277 |
| BsaJI | CCNNGG | 9 cut(s) | 154, 358, 1830, 1852, 2132, 3082, 3516, 3591, 3640 |
| BsaWI | WCCGGW | 2 cut(s) | 494, 1057 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2147, 2177, 3222, 3252 |
| Bse118I | RCCGGY | 3 cut(s) | 583, 935, 1057 |
| Bse1I | ACTGG | 6 cut(s) | 450, 595, 941, 1519, 2106, 2984 |
| Bse21I | CCTNAGG | 1 cut(s) | 1631 |
| Bse3DI | GCAATG | 6 cut(s) | 623, 695, 1595, 1890, 2502, 3171 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2796, 3201 |
| BseBI | CCWGG | 7 cut(s) | 521, 1172, 1853, 2133, 2657, 3084, 3592 |
| BseCI | ATCGAT | 1 cut(s) | 2667 |
| BseDI | CCNNGG | 9 cut(s) | 154, 358, 1830, 1852, 2132, 3082, 3516, 3591, 3640 |
| BseJI | GATNNNNATC | 2 cut(s) | 2796, 3201 |
| BseMI | GCAATG | 6 cut(s) | 623, 695, 1595, 1890, 2502, 3171 |
| BseMII | CTCAG | 8 cut(s) | 669, 822, 1740, 1915, 2724, 3447, 3461, 3473 |
| BseNI | ACTGG | 6 cut(s) | 450, 595, 941, 1519, 2106, 2984 |
| BseRI | GAGGAG | 2 cut(s) | 1469, 2963 |
| BseXI | GCAGC | 8 cut(s) | 158, 567, 687, 730, 822, 1732, 2494, 2707 |
| BsgI | GTGCAG | 1 cut(s) | 686 |
| Bsh1236I | CGCG | 3 cut(s) | 2796, 3129, 3216 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2671 |
| BshNI | GGYRCC | 1 cut(s) | 552 |
| BshTI | ACCGGT | 1 cut(s) | 1057 |
| BshVI | ATCGAT | 1 cut(s) | 2667 |
| BsiEI | CGRYCG | 1 cut(s) | 2671 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1170, 2925 |
| BsiSI | CCGG | 9 cut(s) | 428, 495, 584, 936, 1058, 2427, 2556, 3392, 3666 |
| BslFI | GGGAC | 2 cut(s) | 109, 3065 |
| BsmBI | CGTCTC | 3 cut(s) | 544, 1829, 2456 |
| BsmFI | GGGAC | 2 cut(s) | 109, 3065 |
| BsmI | GAATGC | 3 cut(s) | 1268, 1432, 2653 |
| Bso31I | GGTCTC | 5 cut(s) | 455, 1322, 1981, 2729, 3277 |
| Bsp1286I | GDGCHC | 3 cut(s) | 154, 1170, 2925 |
| Bsp1407I | TGTACA | 1 cut(s) | 2337 |
| Bsp68I | TCGCGA | 1 cut(s) | 2796 |
| BspACI | CCGC | 9 cut(s) | 762, 1030, 1237, 1652, 1848, 2570, 3056, 3059, 3127 |
| BspCNI | CTCAG | 8 cut(s) | 668, 823, 1741, 1914, 2725, 3446, 3460, 3472 |
| BspDI | ATCGAT | 1 cut(s) | 2667 |
| BspFNI | CGCG | 3 cut(s) | 2796, 3129, 3216 |
| BspHI | TCATGA | 2 cut(s) | 1279, 1350 |
| BspLI | GGNNCC | 7 cut(s) | 125, 554, 1864, 2848, 3088, 3319, 3664 |
| BspPI | GGATC | 4 cut(s) | 823, 2792, 2799, 3342 |
| BspT107I | GGYRCC | 1 cut(s) | 552 |
| BspTI | CTTAAG | 1 cut(s) | 709 |
| BspTNI | GGTCTC | 5 cut(s) | 455, 1322, 1981, 2729, 3277 |
| BsrDI | GCAATG | 6 cut(s) | 623, 695, 1595, 1890, 2502, 3171 |
| BsrFI | RCCGGY | 3 cut(s) | 583, 935, 1057 |
| BsrGI | TGTACA | 1 cut(s) | 2337 |
| BsrI | ACTGG | 6 cut(s) | 450, 595, 941, 1519, 2106, 2984 |
| BssAI | RCCGGY | 3 cut(s) | 583, 935, 1057 |
| BssECI | CCNNGG | 9 cut(s) | 154, 358, 1830, 1852, 2132, 3082, 3516, 3591, 3640 |
| BssNI | GRCGYC | 1 cut(s) | 2157 |
| BssT1I | CCWWGG | 2 cut(s) | 154, 358 |
| Bst2UI | CCWGG | 7 cut(s) | 521, 1172, 1853, 2133, 2657, 3084, 3592 |
| Bst6I | CTCTTC | 3 cut(s) | 270, 1057, 2206 |
| BstACI | GRCGYC | 1 cut(s) | 2157 |
| BstAFI | CTTAAG | 1 cut(s) | 709 |
| BstAUI | TGTACA | 1 cut(s) | 2337 |
| BstBAI | YACGTR | 2 cut(s) | 2249, 2438 |
| BstC8I | GCNNGC | 8 cut(s) | 937, 1241, 1654, 1800, 1846, 2091, 2771, 3651 |
| BstDSI | CCRYGG | 3 cut(s) | 1830, 3516, 3640 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 879 |
| BstFNI | CGCG | 3 cut(s) | 2796, 3129, 3216 |
| BstHHI | GCGC | 2 cut(s) | 616, 3075 |
| BstMCI | CGRYCG | 1 cut(s) | 2671 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 749, 1754, 1854, 2729 |
| BstNI | CCWGG | 7 cut(s) | 521, 1172, 1853, 2133, 2657, 3084, 3592 |
| BstNSI | RCATGY | 4 cut(s) | 1243, 1373, 2244, 2773 |
| BstSFI | CTRYAG | 2 cut(s) | 525, 1417 |
| BstSNI | TACGTA | 1 cut(s) | 2438 |
| BstUI | CGCG | 3 cut(s) | 2796, 3129, 3216 |
| BstV1I | GCAGC | 8 cut(s) | 158, 567, 687, 730, 822, 1732, 2494, 2707 |
| BstV2I | GAAGAC | 1 cut(s) | 777 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1156 |
| Bsu15I | ATCGAT | 1 cut(s) | 2667 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1631 |
| BsuI | GTATCC | 1 cut(s) | 40 |
| BsuTUI | ATCGAT | 1 cut(s) | 2667 |
| BtgI | CCRYGG | 3 cut(s) | 1830, 3516, 3640 |
| BtgZI | GCGATG | 2 cut(s) | 189, 3144 |
| BtsI | GCAGTG | 1 cut(s) | 438 |
| BtsIMutI | CAGTG | 8 cut(s) | 188, 438, 786, 948, 2036, 2525, 2922, 2977 |
| BtuMI | TCGCGA | 1 cut(s) | 2796 |
| Cac8I | GCNNGC | 8 cut(s) | 937, 1241, 1654, 1800, 1846, 2091, 2771, 3651 |
| CciI | TCATGA | 2 cut(s) | 1279, 1350 |
| CfoI | GCGC | 2 cut(s) | 616, 3075 |
| Cfr10I | RCCGGY | 3 cut(s) | 583, 935, 1057 |
| ClaI | ATCGAT | 1 cut(s) | 2667 |
| CseI | GACGC | 2 cut(s) | 1850, 2267 |
| CspAI | ACCGGT | 1 cut(s) | 1057 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 2066, 2101, 2541, 2576, 2640, 2675 |
| DraI | TTTAAA | 1 cut(s) | 1366 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 447, 536 |
| DriI | GACNNNNNGTC | 1 cut(s) | 286 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 447, 536 |
| EaeI | YGGCCR | 4 cut(s) | 219, 1500, 2686, 3615 |
| Eam1104I | CTCTTC | 3 cut(s) | 270, 1057, 2206 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 286 |
| EarI | CTCTTC | 3 cut(s) | 270, 1057, 2206 |
| EciI | GGCGGA | 2 cut(s) | 1019, 3045 |
| Ecl136II | GAGCTC | 1 cut(s) | 1168 |
| Eco105I | TACGTA | 1 cut(s) | 2438 |
| Eco130I | CCWWGG | 2 cut(s) | 154, 358 |
| Eco147I | AGGCCT | 2 cut(s) | 1629, 2292 |
| Eco24I | GRGCYC | 2 cut(s) | 154, 1170 |
| Eco31I | GGTCTC | 5 cut(s) | 455, 1322, 1981, 2729, 3277 |
| Eco47I | GGWCC | 7 cut(s) | 107, 123, 186, 280, 733, 1328, 3317 |
| Eco53kI | GAGCTC | 1 cut(s) | 1168 |
| Eco57I | CTGAAG | 2 cut(s) | 471, 2060 |
| Eco72I | CACGTG | 1 cut(s) | 2249 |
| Eco81I | CCTNAGG | 1 cut(s) | 1631 |
| EcoICRI | GAGCTC | 1 cut(s) | 1168 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 879 |
| EcoRII | CCWGG | 7 cut(s) | 519, 1170, 1851, 2131, 2655, 3082, 3590 |
| EcoT14I | CCWWGG | 2 cut(s) | 154, 358 |
| EcoT22I | ATGCAT | 1 cut(s) | 1245 |
| EcoT38I | GRGCYC | 2 cut(s) | 154, 1170 |
| ErhI | CCWWGG | 2 cut(s) | 154, 358 |
| Esp3I | CGTCTC | 3 cut(s) | 544, 1829, 2456 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 996, 1028, 2294, 2326 |
| FaqI | GGGAC | 2 cut(s) | 109, 3065 |
| FauI | CCCGC | 2 cut(s) | 769, 1645 |
| FbaI | TGATCA | 2 cut(s) | 907, 2515 |
| FblI | GTMKAC | 1 cut(s) | 1739 |
| FriOI | GRGCYC | 2 cut(s) | 154, 1170 |
| FspBI | CTAG | 7 cut(s) | 18, 608, 623, 723, 1643, 2475, 2597 |
| GlaI | GCGC | 2 cut(s) | 615, 3074 |
| GsuI | CTGGAG | 2 cut(s) | 2149, 3383 |
| HapII | CCGG | 9 cut(s) | 428, 495, 584, 936, 1058, 2427, 2556, 3392, 3666 |
| HgaI | GACGC | 2 cut(s) | 1850, 2267 |
| HhaI | GCGC | 2 cut(s) | 616, 3075 |
| Hin1I | GRCGYC | 1 cut(s) | 2157 |
| Hin6I | GCGC | 2 cut(s) | 614, 3073 |
| HinP1I | GCGC | 2 cut(s) | 614, 3073 |
| HincII | GTYRAC | 4 cut(s) | 1573, 2052, 2908, 3109 |
| HindII | GTYRAC | 4 cut(s) | 1573, 2052, 2908, 3109 |
| HindIII | AAGCTT | 2 cut(s) | 2826, 2837 |
| HpaII | CCGG | 9 cut(s) | 428, 495, 584, 936, 1058, 2427, 2556, 3392, 3666 |
| Hpy99I | CGWCG | 2 cut(s) | 517, 3382 |
| HpyCH4IV | ACGT | 8 cut(s) | 145, 198, 465, 920, 2157, 2248, 2437, 3402 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 749, 1754, 1854, 2729 |
| HpySE526I | ACGT | 8 cut(s) | 145, 198, 465, 920, 2157, 2248, 2437, 3402 |
| Hsp92I | GRCGYC | 1 cut(s) | 2157 |
| HspAI | GCGC | 2 cut(s) | 614, 3073 |
| KpnI | GGTACC | 1 cut(s) | 556 |
| KroI | GCCGGC | 1 cut(s) | 935 |
| KroNI | GCCGGC | 1 cut(s) | 937 |
| Ksp22I | TGATCA | 2 cut(s) | 907, 2515 |
| LmnI | GCTCC | 7 cut(s) | 298, 611, 1173, 2460, 2920, 3364, 3662 |
| Lsp1109I | GCAGC | 8 cut(s) | 158, 567, 687, 730, 822, 1732, 2494, 2707 |
| LweI | GCATC | 9 cut(s) | 481, 1252, 1744, 1894, 2146, 3015, 3060, 3121, 3574 |
| MaeI | CTAG | 7 cut(s) | 18, 608, 623, 723, 1643, 2475, 2597 |
| MaeII | ACGT | 8 cut(s) | 145, 198, 465, 920, 2157, 2248, 2437, 3402 |
| MfeI | CAATTG | 2 cut(s) | 267, 1974 |
| MhlI | GDGCHC | 3 cut(s) | 154, 1170, 2925 |
| MlsI | TGGCCA | 4 cut(s) | 221, 1502, 2688, 3617 |
| MluNI | TGGCCA | 4 cut(s) | 221, 1502, 2688, 3617 |
| MlyI | GAGTC | 7 cut(s) | 153, 287, 1761, 2047, 2667, 2821, 3425 |
| MmeI | TCCRAC | 1 cut(s) | 3208 |
| Mox20I | TGGCCA | 4 cut(s) | 221, 1502, 2688, 3617 |
| Mph1103I | ATGCAT | 1 cut(s) | 1245 |
| MroNI | GCCGGC | 1 cut(s) | 935 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2828 |
| MscI | TGGCCA | 4 cut(s) | 221, 1502, 2688, 3617 |
| MseI | TTAA | 8 cut(s) | 369, 710, 1365, 1623, 1871, 2142, 2547, 3483 |
| MslI | CAYNNNNRTG | 7 cut(s) | 335, 386, 1154, 2371, 2606, 3023, 3164 |
| Msp20I | TGGCCA | 4 cut(s) | 221, 1502, 2688, 3617 |
| MspA1I | CMGCKG | 3 cut(s) | 171, 764, 3095 |
| MspCI | CTTAAG | 1 cut(s) | 709 |
| MspI | CCGG | 9 cut(s) | 428, 495, 584, 936, 1058, 2427, 2556, 3392, 3666 |
| MssI | GTTTAAAC | 1 cut(s) | 1366 |
| MunI | CAATTG | 2 cut(s) | 267, 1974 |
| Mva1269I | GAATGC | 3 cut(s) | 1268, 1432, 2653 |
| MvaI | CCWGG | 7 cut(s) | 521, 1172, 1853, 2133, 2657, 3084, 3592 |
| MvnI | CGCG | 3 cut(s) | 2796, 3129, 3216 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 749, 1754, 1854, 2729 |
| NaeI | GCCGGC | 1 cut(s) | 937 |
| NciI | CCSGG | 3 cut(s) | 2556, 3392, 3667 |
| NgoMIV | GCCGGC | 1 cut(s) | 935 |
| NlaIV | GGNNCC | 7 cut(s) | 125, 554, 1864, 2848, 3088, 3319, 3664 |
| NmuCI | GTSAC | 6 cut(s) | 586, 596, 790, 1126, 1528, 2249 |
| NruI | TCGCGA | 1 cut(s) | 2796 |
| NsiI | ATGCAT | 1 cut(s) | 1245 |
| NspI | RCATGY | 4 cut(s) | 1243, 1373, 2244, 2773 |
| PaeI | GCATGC | 2 cut(s) | 1243, 2773 |
| PagI | TCATGA | 2 cut(s) | 1279, 1350 |
| PceI | AGGCCT | 2 cut(s) | 1629, 2292 |
| PciI | ACATGT | 1 cut(s) | 1369 |
| PctI | GAATGC | 3 cut(s) | 1268, 1432, 2653 |
| PdiI | GCCGGC | 1 cut(s) | 937 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2828 |
| PfeI | GAWTC | 9 cut(s) | 230, 313, 354, 424, 776, 1023, 1924, 2061, 3202 |
| PflFI | GACNNNGTC | 1 cut(s) | 447 |
| PfoI | TCCNGGA | 1 cut(s) | 1170 |
| PinAI | ACCGGT | 1 cut(s) | 1057 |
| Ple19I | CGATCG | 1 cut(s) | 2671 |
| PleI | GAGTC | 7 cut(s) | 153, 287, 1761, 2047, 2667, 2820, 3425 |
| PmaCI | CACGTG | 1 cut(s) | 2249 |
| PmeI | GTTTAAAC | 1 cut(s) | 1366 |
| PmlI | CACGTG | 1 cut(s) | 2249 |
| PpsI | GAGTC | 7 cut(s) | 153, 287, 1761, 2047, 2667, 2820, 3425 |
| Ppu21I | YACGTR | 2 cut(s) | 2249, 2438 |
| PscI | ACATGT | 1 cut(s) | 1369 |
| PshBI | ATTAAT | 2 cut(s) | 2547, 3483 |
| Psp124BI | GAGCTC | 1 cut(s) | 1170 |
| Psp6I | CCWGG | 7 cut(s) | 519, 1170, 1851, 2131, 2655, 3082, 3590 |
| PspCI | CACGTG | 1 cut(s) | 2249 |
| PspGI | CCWGG | 7 cut(s) | 519, 1170, 1851, 2131, 2655, 3082, 3590 |
| PspN4I | GGNNCC | 7 cut(s) | 125, 554, 1864, 2848, 3088, 3319, 3664 |
| PsyI | GACNNNGTC | 1 cut(s) | 447 |
| PvuI | CGATCG | 1 cut(s) | 2671 |
| PvuII | CAGCTG | 2 cut(s) | 171, 3095 |
| RruI | TCGCGA | 1 cut(s) | 2796 |
| RseI | CAYNNNNRTG | 7 cut(s) | 335, 386, 1154, 2371, 2606, 3023, 3164 |
| SacI | GAGCTC | 1 cut(s) | 1170 |
| SaqAI | TTAA | 8 cut(s) | 369, 710, 1365, 1623, 1871, 2142, 2547, 3483 |
| SchI | GAGTC | 7 cut(s) | 153, 287, 1761, 2047, 2667, 2821, 3425 |
| SduI | GDGCHC | 3 cut(s) | 154, 1170, 2925 |
| SfaNI | GCATC | 9 cut(s) | 481, 1252, 1744, 1894, 2146, 3015, 3060, 3121, 3574 |
| SfcI | CTRYAG | 2 cut(s) | 525, 1417 |
| SinI | GGWCC | 7 cut(s) | 107, 123, 186, 280, 733, 1328, 3317 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 335, 386, 1154, 2371, 2606, 3023, 3164 |
| SmlI | CTYRAG | 8 cut(s) | 709, 996, 1451, 1487, 1715, 1769, 2809, 3657 |
| SmoI | CTYRAG | 8 cut(s) | 709, 996, 1451, 1487, 1715, 1769, 2809, 3657 |
| SnaBI | TACGTA | 1 cut(s) | 2438 |
| SphI | GCATGC | 2 cut(s) | 1243, 2773 |
| SseBI | AGGCCT | 2 cut(s) | 1629, 2292 |
| SsiI | CCGC | 9 cut(s) | 762, 1030, 1237, 1652, 1848, 2570, 3056, 3059, 3127 |
| SspI | AATATT | 2 cut(s) | 1470, 2221 |
| SspMI | CTAG | 7 cut(s) | 18, 608, 623, 723, 1643, 2475, 2597 |
| SstI | GAGCTC | 1 cut(s) | 1170 |
| StuI | AGGCCT | 2 cut(s) | 1629, 2292 |
| StyI | CCWWGG | 2 cut(s) | 154, 358 |
| TaiI | ACGT | 8 cut(s) | 148, 201, 468, 923, 2160, 2251, 2440, 3405 |
| TaqI | TCGA | 8 cut(s) | 261, 1104, 2214, 2606, 2667, 2671, 3337, 3380 |
| TatI | WGTACW | 2 cut(s) | 1000, 2337 |
| TauI | GCSGC | 3 cut(s) | 1851, 2572, 3061 |
| TfiI | GAWTC | 9 cut(s) | 230, 313, 354, 424, 776, 1023, 1924, 2061, 3202 |
| Tru1I | TTAA | 8 cut(s) | 369, 710, 1365, 1623, 1871, 2142, 2547, 3483 |
| Tru9I | TTAA | 8 cut(s) | 369, 710, 1365, 1623, 1871, 2142, 2547, 3483 |
| TscAI | CASTG | 8 cut(s) | 188, 438, 786, 948, 2043, 2525, 2922, 2984 |
| TseFI | GTSAC | 6 cut(s) | 586, 596, 790, 1126, 1528, 2249 |
| TseI | GCWGC | 8 cut(s) | 171, 580, 700, 718, 835, 1745, 2507, 2720 |
| Tsp45I | GTSAC | 6 cut(s) | 586, 596, 790, 1126, 1528, 2249 |
| TspGWI | ACGGA | 8 cut(s) | 376, 998, 1262, 1558, 1853, 2637, 3094, 3505 |
| TspRI | CASTG | 8 cut(s) | 188, 438, 786, 948, 2043, 2525, 2922, 2984 |
| Tth111I | GACNNNGTC | 1 cut(s) | 447 |
| Vha464I | CTTAAG | 1 cut(s) | 709 |
| VpaK11BI | GGWCC | 7 cut(s) | 107, 123, 186, 280, 733, 1328, 3317 |
| VspI | ATTAAT | 2 cut(s) | 2547, 3483 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 879 |
| XapI | RAATTY | 7 cut(s) | 415, 1382, 1678, 2229, 2349, 2396, 3218 |
| XceI | RCATGY | 4 cut(s) | 1243, 1373, 2244, 2773 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 117, 1156, 1550, 2589 |
| XmiI | GTMKAC | 1 cut(s) | 1739 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2828 |
| XspI | CTAG | 7 cut(s) | 18, 608, 623, 723, 1643, 2475, 2597 |
| ZraI | GACGTC | 1 cut(s) | 2158 |
| Zsp2I | ATGCAT | 1 cut(s) | 1245 |