Rorug06G0154800

Retroviral aspartyl protease

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0001157
Physical Location & Seq
Forward (+)
22215447 .. 22217252
1806 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0154800.1

Sequence Viewer

Length: 1506 bp
ATGGCAAAGCATTTAGCTCTCGCCTTTTCTCTTTGCTTGCTTGTTCTCTTCCACGGCTGCTTAGCCAGTCGCCAACAATCCAGCCAGCAAAATGAGTGCCAGCTGAACCAGATTCAAGCCCGCGAGCCTGACAACCGTATTGAGACTGAAGCAGGTCGGATTGAGTCATGGGACTACAACCAGGATGACTTGCAGTGCGCTGGTGTCGCTGTTCAAAGAATCACCATTGAGCGTAATGGCCTTCACTTGCCTTCTTACACTAACACTCCAAGGCTTGCGTACGTTGTACAAGGTAGGGGTCATCTAGGGATGGTATTCCCTGGCTGTCCTGAGACATTTGAGGAGTCTGAGCAATCTGATGAAGAACAACAGGATCAGCAACAACAACGGCAAGGCCAACAAGGACAACAAGGACAATTCGGACAGCAAGGCCAACAAGGACAACAAGACTTTGAACAGCTAGACCGACACCAGAGGGTGCGACGCGTCAAAGAAGGTGATGTTATCGCAATCCCCGCCGGAGTCACAACCTGGTCTCACAACGATGGTGACAGATCTCTTGTTTTTGTTACTCTTTTAGACATCGGCAATAACCACAATCAGCTTGACCAAAACCCAAGGCGATTTTATCTTGCTGGTAACCCACAAGATGAGTTCAACCAACAAGGCCAAAGACAACAAGGACAACAAGGAAGGAGCAGGCAGCAACGGCAGGGAAACAACAACAACAACATCTTTGCCGGCCTCGAGACACAGCTCCTCGCCGACGCTCTCAACATCGACCAACAGACTGCCCAGCAGCTCCAGGGACAGAACGACAACAGGCCACAGATTGTTAGGGTTCAGGGACGTCTCGACTTTGTCGAGCCACCACGGTCACAGAGGGAGGAAAGACAACTGCAAGGACAACAAGGACAACAGGGACAGAATGGCCTTGAGGAGCTATTCTGCCACATGAAGATCAAGCAGAACATCGGCAAGCCTTCAATGGCTGACGTCTTCAGCCCGCAAGCCGGTCGCATCAGCACCCTCAACAGCTTTAGCATGCCTATTCTCAGGCACCTCCGCCTCAGTGCTGAGAGAGGCTTCTTGTACAACAATGCTATCCACAGCCCACACTGGAACTTGAATGCCCATGAGATCGTCTATGTCATCAGAGGTAGCGCCAGGGTTCAGGTGGTGAACGACAACGGCGAGACCATCTTGGACGACCAGGTCCGCCAGGGACAGCTCTTCGTCGTGCCACAGAACCACGCCGTGTTGCAGAAGGCCATGAGCAACGGATACGAGTACATTGCCTTCAAGACCGATGACAATGCCATGATCAACACTCTGGCTGGCAGGACCTCCGTCTTGCGGGCACTCCCCGACGTGGTCCTCGCCAACGCCTACCAGATGGACCGTGAGCAGGCAAGGAACCTCAAATACAACAGGCAGGAGACCCTTGCCTTGAGCTCCTCAAGGTCTTCCCAGTCACAGGTACTGGTGGGAGTAAATGAGATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVP_2

Protein Analysis

501

Amino Acids

56.71

Weight (kDa)

6.03

Isoelectric Point (pI)

57.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cupin_1 PF00190 39 - 215 7.4e-28 Cupin
Cupin_1 PF00190 324 - 471 2.2e-40 Cupin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1214
AatII GACGTC 2 cut(s) 853, 999
Acc36I ACCTGC 1 cut(s) 143
AccB1I GGYRCC 1 cut(s) 1059
AccII CGCG 2 cut(s) 123, 486
AciI CCGC 6 cut(s) 121, 516, 1007, 1066, 1219, 1357
AclWI GGATC 1 cut(s) 381
AcuI CTGAAG 2 cut(s) 168, 985
AcyI GRCGYC 2 cut(s) 850, 996
AdeI CACNNNGTG 1 cut(s) 1258
AfaI GTAC 5 cut(s) 281, 288, 1094, 1292, 1482
AfiI CCNNNNNNNGG 5 cut(s) 1013, 1356, 1372, 1408, 1477
AflIII ACRYGT 1 cut(s) 484
AgsI TTSAA 7 cut(s) 116, 215, 455, 658, 987, 1129, 1303
AjiI CACGTC 1 cut(s) 1372
AjnI CCWGG 7 cut(s) 180, 319, 530, 804, 1166, 1212, 1221
Alw21I GWGCWC 1 cut(s) 1457
Alw26I GTCTC 7 cut(s) 137, 326, 540, 743, 857, 1190, 1433
AlwI GGATC 1 cut(s) 381
AlwNI CAGNNNCTG 1 cut(s) 1483
Ama87I CYCGRG 1 cut(s) 746
AoxI GGCC 8 cut(s) 238, 394, 430, 667, 742, 824, 931, 1269
ApeKI GCWGC 3 cut(s) 57, 703, 799
AspLEI GCGC 2 cut(s) 200, 1166
AspS9I GGNCC 4 cut(s) 1216, 1344, 1375, 1399
AsuHPI GGTGA 4 cut(s) 214, 509, 560, 1192
AvaI CYCGRG 1 cut(s) 746
AvaII GGWCC 4 cut(s) 1216, 1344, 1375, 1399
BaeGI GKGCMC 1 cut(s) 1363
BanI GGYRCC 1 cut(s) 1059
BanII GRGCYC 1 cut(s) 1457
BarI GAAGNNNNNNTAC 2 cut(s) 1283, 1315
BbsI GAAGAC 2 cut(s) 991, 1458
Bbv12I GWGCWC 1 cut(s) 1457
BbvI GCAGC 3 cut(s) 44, 715, 811
BccI CCATC 4 cut(s) 304, 539, 1208, 1390
BceAI ACGGC 5 cut(s) 70, 404, 725, 1207, 1241
BcgI CGANNNNNNTGC 6 cut(s) 998, 1032, 1277, 1298, 1311, 1332
BciT130I CCWGG 7 cut(s) 182, 321, 532, 806, 1168, 1214, 1223
BciVI GTATCC 1 cut(s) 1277
BclI TGATCA 1 cut(s) 1323
BcoDI GTCTC 7 cut(s) 137, 326, 540, 743, 857, 1190, 1433
BfaI CTAG 2 cut(s) 305, 461
BfoI RGCGCY 1 cut(s) 1167
BfuAI ACCTGC 1 cut(s) 143
BfuI GTATCC 1 cut(s) 1277
BglII AGATCT 1 cut(s) 554
BisI GCNGC 3 cut(s) 58, 704, 800
BlpI GCTNAGC 1 cut(s) 61
BlsI GCNGC 3 cut(s) 59, 705, 801
Bme1390I CCNGG 7 cut(s) 182, 321, 532, 806, 1168, 1214, 1223
Bme18I GGWCC 4 cut(s) 1216, 1344, 1375, 1399
BmeT110I CYCGRG 1 cut(s) 746
BmgBI CACGTC 1 cut(s) 1372
BmgT120I GGNCC 4 cut(s) 1216, 1344, 1375, 1399
BmiI GGNNCC 2 cut(s) 1061, 1418
BmrFI CCNGG 7 cut(s) 182, 321, 532, 806, 1168, 1214, 1223
BmrI ACTGGG 1 cut(s) 1465
BmsI GCATC 1 cut(s) 1029
BmuI ACTGGG 1 cut(s) 1465
BoxI GACNNNNGTC 1 cut(s) 1349
BpiI GAAGAC 2 cut(s) 991, 1458
BpmI CTGGAG 1 cut(s) 788
Bpu1102I GCTNAGC 1 cut(s) 61
BpuEI CTTGAG 3 cut(s) 956, 1444, 1471
BsaHI GRCGYC 2 cut(s) 850, 996
BsaI GGTCTC 3 cut(s) 540, 1190, 1433
BsaJI CCNNGG 8 cut(s) 52, 269, 319, 617, 805, 872, 1167, 1222
BsaXI ACNNNNNCTCC 2 cut(s) 250, 280
Bsc4I CCNNNNNNNGG 5 cut(s) 1013, 1356, 1372, 1408, 1477
Bse118I RCCGGY 2 cut(s) 740, 1013
Bse1I ACTGG 4 cut(s) 66, 1124, 1471, 1488
Bse3DI GCAATG 1 cut(s) 1293
BseBI CCWGG 7 cut(s) 182, 321, 532, 806, 1168, 1214, 1223
BseDI CCNNGG 8 cut(s) 52, 269, 319, 617, 805, 872, 1167, 1222
BseGI GGATG 2 cut(s) 190, 315
BseLI CCNNNNNNNGG 5 cut(s) 1013, 1356, 1372, 1408, 1477
BseMI GCAATG 1 cut(s) 1293
BseMII CTCAG 5 cut(s) 321, 339, 1068, 1069, 1084
BseNI ACTGG 4 cut(s) 66, 1124, 1471, 1488
BseRI GAGGAG 4 cut(s) 356, 749, 953, 1447
BseSI GKGCMC 1 cut(s) 1363
BseXI GCAGC 3 cut(s) 44, 715, 811
BseYI CCCAGC 1 cut(s) 795
Bsh1236I CGCG 2 cut(s) 123, 486
Bsh1285I CGRYCG 1 cut(s) 1018
BshFI GGCC 8 cut(s) 240, 396, 432, 669, 744, 826, 933, 1271
BshNI GGYRCC 1 cut(s) 1059
BsiEI CGRYCG 1 cut(s) 1018
BsiHKAI GWGCWC 1 cut(s) 1457
BsiHKCI CYCGRG 1 cut(s) 746
BsiSI CCGG 3 cut(s) 519, 741, 1014
BsiWI CGTACG 1 cut(s) 279
BslFI GGGAC 5 cut(s) 185, 822, 861, 936, 1239
BslI CCNNNNNNNGG 5 cut(s) 1013, 1356, 1372, 1408, 1477
BsmAI GTCTC 7 cut(s) 137, 326, 540, 743, 857, 1190, 1433
BsmBI CGTCTC 1 cut(s) 857
BsmFI GGGAC 5 cut(s) 185, 822, 861, 936, 1239
BsmI GAATGC 1 cut(s) 1135
BsnI GGCC 8 cut(s) 240, 396, 432, 669, 744, 826, 933, 1271
Bso31I GGTCTC 3 cut(s) 540, 1190, 1433
BsoBI CYCGRG 1 cut(s) 746
Bsp1286I GDGCHC 2 cut(s) 1363, 1457
Bsp1407I TGTACA 2 cut(s) 286, 1092
Bsp143I GATC 5 cut(s) 373, 554, 960, 1140, 1323
Bsp1720I GCTNAGC 1 cut(s) 61
BspACI CCGC 6 cut(s) 121, 516, 1007, 1066, 1219, 1357
BspANI GGCC 8 cut(s) 240, 396, 432, 669, 744, 826, 933, 1271
BspCNI CTCAG 5 cut(s) 322, 340, 1068, 1069, 1083
BspFNI CGCG 2 cut(s) 123, 486
BspLI GGNNCC 2 cut(s) 1061, 1418
BspMI ACCTGC 1 cut(s) 143
BspPI GGATC 1 cut(s) 381
BspQI GCTCTTC 1 cut(s) 1238
BspT107I GGYRCC 1 cut(s) 1059
BspTNI GGTCTC 3 cut(s) 540, 1190, 1433
BsrDI GCAATG 1 cut(s) 1293
BsrFI RCCGGY 2 cut(s) 740, 1013
BsrGI TGTACA 2 cut(s) 286, 1092
BsrI ACTGG 4 cut(s) 66, 1124, 1471, 1488
BssAI RCCGGY 2 cut(s) 740, 1013
BssECI CCNNGG 8 cut(s) 52, 269, 319, 617, 805, 872, 1167, 1222
BssMI GATC 5 cut(s) 373, 554, 960, 1140, 1323
BssNI GRCGYC 2 cut(s) 850, 996
BssT1I CCWWGG 2 cut(s) 269, 617
Bst2UI CCWGG 7 cut(s) 182, 321, 532, 806, 1168, 1214, 1223
Bst4CI ACNGT 3 cut(s) 137, 876, 1403
Bst6I CTCTTC 2 cut(s) 53, 1238
BstACI GRCGYC 2 cut(s) 850, 996
BstAUI TGTACA 2 cut(s) 286, 1092
BstDEI CTNAG 6 cut(s) 61, 330, 348, 1055, 1070, 1077
BstDSI CCRYGG 2 cut(s) 52, 872
BstEII GGTNACC 1 cut(s) 638
BstF5I GGATG 2 cut(s) 190, 315
BstFNI CGCG 2 cut(s) 123, 486
BstH2I RGCGCY 1 cut(s) 1167
BstHHI GCGC 2 cut(s) 200, 1166
BstKTI GATC 5 cut(s) 376, 557, 963, 1143, 1326
BstMAI GTCTC 7 cut(s) 137, 326, 540, 743, 857, 1190, 1433
BstMBI GATC 5 cut(s) 373, 554, 960, 1140, 1323
BstMCI CGRYCG 1 cut(s) 1018
BstMWI GCNNNNNNNGC 3 cut(s) 206, 515, 709
BstNI CCWGG 7 cut(s) 182, 321, 532, 806, 1168, 1214, 1223
BstNSI RCATGY 1 cut(s) 1048
BstPAI GACNNNNGTC 1 cut(s) 1349
BstPI GGTNACC 1 cut(s) 638
BstSCI CCNGG 7 cut(s) 180, 319, 530, 804, 1166, 1212, 1221
BstSLI GKGCMC 1 cut(s) 1363
BstUI CGCG 2 cut(s) 123, 486
BstV1I GCAGC 3 cut(s) 44, 715, 811
BstV2I GAAGAC 2 cut(s) 991, 1458
BstX2I RGATCY 1 cut(s) 554
BstYI RGATCY 1 cut(s) 554
BsuI GTATCC 1 cut(s) 1277
BsuRI GGCC 8 cut(s) 240, 396, 432, 669, 744, 826, 933, 1271
BtgI CCRYGG 2 cut(s) 52, 872
BtrI CACGTC 1 cut(s) 1372
BtsCI GGATG 2 cut(s) 190, 315
BtsI GCAGTG 1 cut(s) 200
BtsIMutI CAGTG 3 cut(s) 200, 1078, 1117
BveI ACCTGC 1 cut(s) 143
CaiI CAGNNNCTG 1 cut(s) 1483
CfoI GCGC 2 cut(s) 200, 1166
Cfr10I RCCGGY 2 cut(s) 740, 1013
Cfr13I GGNCC 4 cut(s) 1216, 1344, 1375, 1399
CseI GACGC 3 cut(s) 475, 492, 776
CsiI ACCWGGT 2 cut(s) 530, 1212
Csp6I GTAC 5 cut(s) 280, 287, 1093, 1291, 1481
CviAII CATG 6 cut(s) 168, 955, 1045, 1136, 1273, 1321
CviQI GTAC 5 cut(s) 280, 287, 1093, 1291, 1481
DdeI CTNAG 6 cut(s) 61, 330, 348, 1055, 1070, 1077
DpnI GATC 5 cut(s) 375, 556, 962, 1142, 1325
DpnII GATC 5 cut(s) 373, 554, 960, 1140, 1323
DraIII CACNNNGTG 1 cut(s) 1258
DrdI GACNNNNNNGTC 1 cut(s) 1214
DseDI GACNNNNNNGTC 1 cut(s) 1214
Eam1104I CTCTTC 2 cut(s) 53, 1238
EarI CTCTTC 2 cut(s) 53, 1238
EciI GGCGGA 2 cut(s) 1055, 1208
Ecl136II GAGCTC 1 cut(s) 1455
Eco130I CCWWGG 2 cut(s) 269, 617
Eco24I GRGCYC 1 cut(s) 1457
Eco31I GGTCTC 3 cut(s) 540, 1190, 1433
Eco47I GGWCC 4 cut(s) 1216, 1344, 1375, 1399
Eco53kI GAGCTC 1 cut(s) 1455
Eco57I CTGAAG 2 cut(s) 168, 985
Eco88I CYCGRG 1 cut(s) 746
Eco91I GGTNACC 1 cut(s) 638
EcoICRI GAGCTC 1 cut(s) 1455
EcoO109I RGGNCCY 1 cut(s) 1344
EcoO65I GGTNACC 1 cut(s) 638
EcoRII CCWGG 7 cut(s) 180, 319, 530, 804, 1166, 1212, 1221
EcoT14I CCWWGG 2 cut(s) 269, 617
EcoT38I GRGCYC 1 cut(s) 1457
ErhI CCWWGG 2 cut(s) 269, 617
Esp3I CGTCTC 1 cut(s) 857
FaeI CATG 6 cut(s) 171, 958, 1048, 1139, 1276, 1324
FaiI YATR 7 cut(s) 169, 956, 1046, 1137, 1149, 1274, 1322
FaqI GGGAC 5 cut(s) 185, 822, 861, 936, 1239
FatI CATG 6 cut(s) 167, 954, 1044, 1135, 1272, 1320
FauI CCCGC 4 cut(s) 128, 523, 1014, 1350
FbaI TGATCA 1 cut(s) 1323
Fnu4HI GCNGC 3 cut(s) 58, 704, 800
FokI GGATG 2 cut(s) 197, 322
FriOI GRGCYC 1 cut(s) 1457
Fsp4HI GCNGC 3 cut(s) 58, 704, 800
FspBI CTAG 2 cut(s) 305, 461
GlaI GCGC 2 cut(s) 199, 1165
GluI GCNGC 3 cut(s) 58, 704, 800
GsaI CCCAGC 1 cut(s) 799
GsuI CTGGAG 1 cut(s) 788
HaeII RGCGCY 1 cut(s) 1167
HaeIII GGCC 8 cut(s) 240, 396, 432, 669, 744, 826, 933, 1271
HapII CCGG 3 cut(s) 519, 741, 1014
HgaI GACGC 3 cut(s) 475, 492, 776
HhaI GCGC 2 cut(s) 200, 1166
Hin1I GRCGYC 2 cut(s) 850, 996
Hin1II CATG 6 cut(s) 171, 958, 1048, 1139, 1276, 1324
Hin6I GCGC 2 cut(s) 198, 1164
HinP1I GCGC 2 cut(s) 198, 1164
HinfI GANTC 5 cut(s) 112, 164, 219, 344, 522
HpaII CCGG 3 cut(s) 519, 741, 1014
HphI GGTGA 4 cut(s) 214, 509, 560, 1192
Hpy166II GTNNAC 1 cut(s) 1183
Hpy188I TCNGA 5 cut(s) 159, 349, 358, 422, 1157
Hpy188III TCNNGA 4 cut(s) 329, 748, 854, 1303
Hpy8I GTNNAC 1 cut(s) 1183
Hpy99I CGWCG 4 cut(s) 486, 770, 1241, 1373
HpyAV CCTTC 7 cut(s) 251, 261, 488, 687, 993, 1261, 1309
HpyCH4III ACNGT 3 cut(s) 137, 876, 1403
HpyCH4IV ACGT 4 cut(s) 282, 850, 996, 1371
HpyCH4V TGCA 3 cut(s) 193, 901, 1264
HpyF10VI GCNNNNNNNGC 3 cut(s) 206, 515, 709
HpyF3I CTNAG 6 cut(s) 61, 330, 348, 1055, 1070, 1077
HpySE526I ACGT 4 cut(s) 282, 850, 996, 1371
Hsp92I GRCGYC 2 cut(s) 850, 996
Hsp92II CATG 6 cut(s) 171, 958, 1048, 1139, 1276, 1324
HspAI GCGC 2 cut(s) 198, 1164
KroI GCCGGC 1 cut(s) 740
KroNI GCCGGC 1 cut(s) 742
Ksp22I TGATCA 1 cut(s) 1323
Kzo9I GATC 5 cut(s) 373, 554, 960, 1140, 1323
LguI GCTCTTC 1 cut(s) 1238
LmnI GCTCC 5 cut(s) 696, 762, 807, 940, 1460
Lsp1109I GCAGC 3 cut(s) 44, 715, 811
LweI GCATC 1 cut(s) 1029
MabI ACCWGGT 2 cut(s) 530, 1212
MaeI CTAG 2 cut(s) 305, 461
MaeII ACGT 4 cut(s) 282, 850, 996, 1371
MaeIII GTNAC 6 cut(s) 523, 548, 568, 638, 876, 1473
MalI GATC 5 cut(s) 375, 556, 962, 1142, 1325
MboI GATC 5 cut(s) 373, 554, 960, 1140, 1323
MboII GAAGA 6 cut(s) 40, 374, 970, 991, 1225, 1458
MflI RGATCY 1 cut(s) 554
MhlI GDGCHC 2 cut(s) 1363, 1457
MluCI AATT 1 cut(s) 416
MluI ACGCGT 1 cut(s) 484
MlyI GAGTC 3 cut(s) 173, 353, 531
MmeI TCCRAC 1 cut(s) 137
MroNI GCCGGC 1 cut(s) 740
MslI CAYNNNNRTG 1 cut(s) 543
MspA1I CMGCKG 1 cut(s) 103
MspI CCGG 3 cut(s) 519, 741, 1014
MspR9I CCNGG 7 cut(s) 182, 321, 532, 806, 1168, 1214, 1223
Mva1269I GAATGC 1 cut(s) 1135
MvaI CCWGG 7 cut(s) 182, 321, 532, 806, 1168, 1214, 1223
MvnI CGCG 2 cut(s) 123, 486
MwoI GCNNNNNNNGC 3 cut(s) 206, 515, 709
NaeI GCCGGC 1 cut(s) 742
NdeII GATC 5 cut(s) 373, 554, 960, 1140, 1323
NgoMIV GCCGGC 1 cut(s) 740
NlaIII CATG 6 cut(s) 171, 958, 1048, 1139, 1276, 1324
NlaIV GGNNCC 2 cut(s) 1061, 1418
NmuCI GTSAC 4 cut(s) 523, 548, 876, 1473
NspI RCATGY 1 cut(s) 1048
PaeI GCATGC 1 cut(s) 1048
PaeR7I CTCGAG 1 cut(s) 746
PciSI GCTCTTC 1 cut(s) 1238
PcsI WCGNNNNNNNCGW 2 cut(s) 861, 1191
PctI GAATGC 1 cut(s) 1135
PdiI GCCGGC 1 cut(s) 742
PfeI GAWTC 2 cut(s) 112, 219
Pfl23II CGTACG 1 cut(s) 279
PflFI GACNNNGTC 3 cut(s) 860, 1214, 1373
PkrI GCNGC 3 cut(s) 59, 705, 801
PleI GAGTC 3 cut(s) 172, 352, 530
PpsI GAGTC 3 cut(s) 172, 352, 530
PpuMI RGGWCCY 1 cut(s) 1344
PshAI GACNNNNGTC 1 cut(s) 1349
Psp124BI GAGCTC 1 cut(s) 1457
Psp5II RGGWCCY 1 cut(s) 1344
Psp6I CCWGG 7 cut(s) 180, 319, 530, 804, 1166, 1212, 1221
PspEI GGTNACC 1 cut(s) 638
PspFI CCCAGC 1 cut(s) 795
PspGI CCWGG 7 cut(s) 180, 319, 530, 804, 1166, 1212, 1221
PspLI CGTACG 1 cut(s) 279
PspN4I GGNNCC 2 cut(s) 1061, 1418
PspPI GGNCC 4 cut(s) 1216, 1344, 1375, 1399
PspPPI RGGWCCY 1 cut(s) 1344
PsrI GAACNNNNNNTAC 2 cut(s) 1409, 1441
PstNI CAGNNNCTG 1 cut(s) 1483
PsuI RGATCY 1 cut(s) 554
PsyI GACNNNGTC 3 cut(s) 860, 1214, 1373
PvuII CAGCTG 1 cut(s) 103
RsaI GTAC 5 cut(s) 281, 288, 1094, 1292, 1482
RsaNI GTAC 5 cut(s) 280, 287, 1093, 1291, 1481
RseI CAYNNNNRTG 1 cut(s) 543
SacI GAGCTC 1 cut(s) 1457
SapI GCTCTTC 1 cut(s) 1238
SatI GCNGC 3 cut(s) 58, 704, 800
Sau3AI GATC 5 cut(s) 373, 554, 960, 1140, 1323
Sau96I GGNCC 4 cut(s) 1216, 1344, 1375, 1399
SchI GAGTC 3 cut(s) 173, 353, 531
ScrFI CCNGG 7 cut(s) 182, 321, 532, 806, 1168, 1214, 1223
SduI GDGCHC 2 cut(s) 1363, 1457
SexAI ACCWGGT 2 cut(s) 530, 1212
SfaNI GCATC 1 cut(s) 1029
Sfr274I CTCGAG 1 cut(s) 746
SinI GGWCC 4 cut(s) 1216, 1344, 1375, 1399
SlaI CTCGAG 1 cut(s) 746
SmiMI CAYNNNNRTG 1 cut(s) 543
SmlI CTYRAG 4 cut(s) 746, 935, 1450, 1459
SmoI CTYRAG 4 cut(s) 746, 935, 1450, 1459
SphI GCATGC 1 cut(s) 1048
Sse9I AATT 1 cut(s) 416
SsiI CCGC 6 cut(s) 121, 516, 1007, 1066, 1219, 1357
SspMI CTAG 2 cut(s) 305, 461
SstI GAGCTC 1 cut(s) 1457
StyD4I CCNGG 7 cut(s) 180, 319, 530, 804, 1166, 1212, 1221
StyI CCWWGG 2 cut(s) 269, 617
TaaI ACNGT 3 cut(s) 137, 876, 1403
TaiI ACGT 4 cut(s) 285, 853, 999, 1374
TaqI TCGA 4 cut(s) 747, 780, 855, 864
TaqII GACCGA 2 cut(s) 480, 1322
TasI AATT 1 cut(s) 416
TatI WGTACW 3 cut(s) 286, 1092, 1290
TfiI GAWTC 2 cut(s) 112, 219
TscAI CASTG 3 cut(s) 200, 1078, 1124
TseFI GTSAC 4 cut(s) 523, 548, 876, 1473
TseI GCWGC 3 cut(s) 57, 703, 799
Tsp45I GTSAC 4 cut(s) 523, 548, 876, 1473
TspDTI ATGAA 2 cut(s) 375, 971
TspGWI ACGGA 2 cut(s) 1296, 1339
TspRI CASTG 3 cut(s) 200, 1078, 1124
Tth111I GACNNNGTC 3 cut(s) 860, 1214, 1373
VpaK11BI GGWCC 4 cut(s) 1216, 1344, 1375, 1399
XceI RCATGY 1 cut(s) 1048
XcmI CCANNNNNNNNNTGG 1 cut(s) 1174
XhoI CTCGAG 1 cut(s) 746
XspI CTAG 2 cut(s) 305, 461
ZraI GACGTC 2 cut(s) 851, 997
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.