RchiOBHm_Chr3g0488331

L-threonine ammonia-lyase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0001157
Physical Location & Seq
Reverse (-)
35947349 .. 35949290
1942 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ45269

Sequence Viewer

Length: 1737 bp
ATGCAACCACACAACCCCTACCCATTTGACAACCAATGTTTTCGCCCACCTAAAGTTGATCTTCCCCGGTTTTACGGTGACAACGCCGCTGGCGGGTTATCCATGGCGGAACGCTATCTTCGAACCCAAAATATTCCAACACATGCCCACATAGCCACAGTTGCCTCTCACTTTGGACCGACAGCATCCATCTGGATGAACTCCTTTGATCAAAGTAACCCATCAGCTTCTTGGGAACAATTTGTCGGAGCATTCCTGCAACACTTTGGAGGATGCACTACTATTGATTTCAAGGTATCTCTTTCACATATGCAGCAAACATCCTCTGTTGATGCATTCATCAATGAGTTCACCACATTGGCTTACCGGGCACCGGAATGGTCCGACGCCAATCTTCTATCCATCTTTCTCGGTGGACTCAAACCGGCTATCAGGCATGACGTCGTGGCCATTGAACCACGTTCGTTGGCTTATGCCCAGCGCCTGGCACGCCGATATGAAACCAAGCAGGCCGACAACCAGCCCAGTCGACCACCACATCCTTCCAACTGGTCGTACTCTCACAAGGCATTACCCTCCAACATTCCATCGGCCCCCACAACCCACACCACTACAAGCCAAATCACACCCTTTTCCCACCCTGATACCAGCCAAAAACAAAAAGCAGAAACTTCTTTCTGTAAATGGTCCACAAGTAAGCAGAGAGAAGGCAGAGCCCAGGGACTCTGTTACAGCTGTGATGAACAGTGGTCCCAGACCCACGTTGGTAAGAGACCGGTCATGGCCATTTTGGAATCACCAACACCATTGGAGGAACTTCCAATAGAGGAAATTGTGGAAGAGGAACAGCCGTCTGACTCGGAGCAATTTATTCCGATTCACGCCATCACTCACACAATGATCGGTCATATGATGAGATGCAAAGGCTTCATTAACAAACAACCCATTTCTGTGTTCGTTGATTGTCGGTCAGCCACAAATTTCTTGAATCCGGTAGTGGCAACACGTTTGGGTCTCACTATGCAACCCGTGTCGCAGCTCCACTTCACTTCAGCTTCCGGCGAACAACTATCACGGTCGAGCCAGGCTATAGACGCCACCGACTCCATTCAGGGGTACCAATTCACAACCTCATTCTTGTTGATGTTGGTGACTGGGTGCGACCTCCTTCTCGGAGCACAATGGCTAGAGACGCTTGGGTTCATTGGTTGGCATTTCTCAGAGACGGTCATGGTGTTTACAGAAAATGGGCAATGCCATGTGCTTAACGACTTACAAAGACAACCTAGTCAAAAGTACCAATCTGCTTTCAGGGCCCTCTTACCCGCTGAACACTTGGATTCAGTGTCTTCTATCACAGGCCCAATTACAATTCCAGAATCAGCCCTCATCCCTGAGCTACAAACCTTACTCCCACATTATGAAGATGTGTTCTCCCCTCCCGTGGACCTCCTACCCAAACGGGCCATTGATCATCGAATGACTTTGCTGCCCAATTCCGGCCCAATGAATATGAGGCCGTATCGCTACGCTCACTCGCAAAAAACAGACTTAGACGCTCAAGTACAGGAAATGCTTTCGCATGGTCTCATCCGCCCAAGTCATAGCCCTTTCTCTTCACGACTTGGGAAGAGGCTCAAACGATCGTGGCACCTTTTCCTCACTTTGGCAGCCGTGGTCGGCCTGTCTTTTAAGGGGGCGGGATTGTTAGGAATAATCTATTTAATCCCCCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVP_2 RVT_1 Retrotrans_gag gag-asp_proteas rve

Protein Analysis

578

Amino Acids

64.59

Weight (kDa)

6.68

Isoelectric Point (pI)

52.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ty3_capsid PF19259 42 - 168 2.9e-14 Ty3 transposon capsid-like protein
Retrotrans_gag PF03732 55 - 142 8.1e-14 Retrotransposon gag protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1287
AatII GACGTC 1 cut(s) 444
Acc65I GGTACC 1 cut(s) 1116
AccB1I GGYRCC 3 cut(s) 370, 1116, 1650
AccB7I CCANNNNNTGG 1 cut(s) 484
AccI GTMKAC 1 cut(s) 529
AciI CCGC 6 cut(s) 87, 93, 107, 1326, 1594, 1700
AcoI YGGCCR 2 cut(s) 447, 783
AcsI RAATTY 1 cut(s) 979
AcuI CTGAAG 1 cut(s) 1035
AcyI GRCGYC 3 cut(s) 387, 441, 1095
AfaI GTAC 4 cut(s) 557, 1118, 1298, 1566
AfiI CCNNNNNNNGG 7 cut(s) 93, 373, 484, 1113, 1444, 1499, 1666
AflIII ACRYGT 1 cut(s) 1004
AgeI ACCGGT 1 cut(s) 775
AgsI TTSAA 3 cut(s) 292, 455, 988
AjnI CCWGG 3 cut(s) 483, 717, 1083
AluBI AGCT 5 cut(s) 227, 735, 1039, 1055, 1399
AluI AGCT 5 cut(s) 227, 735, 1039, 1055, 1399
Alw21I GWGCWC 1 cut(s) 1180
Alw26I GTCTC 5 cut(s) 766, 1019, 1184, 1217, 1592
AlwNI CAGNNNCTG 1 cut(s) 484
ApaI GGGCCC 1 cut(s) 1318
ApeKI GCWGC 4 cut(s) 313, 1036, 1489, 1670
ApoI RAATTY 1 cut(s) 979
AsiGI ACCGGT 1 cut(s) 775
Asp718I GGTACC 1 cut(s) 1116
AspLEI GCGC 1 cut(s) 483
AsuC2I CCSGG 2 cut(s) 67, 368
AsuHPI GGTGA 4 cut(s) 89, 343, 789, 1162
AsuII TTCGAA 1 cut(s) 121
AvaII GGWCC 5 cut(s) 176, 381, 687, 750, 1447
BaeGI GKGCMC 2 cut(s) 373, 1318
BalI TGGCCA 2 cut(s) 449, 785
BanI GGYRCC 3 cut(s) 370, 1116, 1650
BanII GRGCYC 2 cut(s) 718, 1318
BbsI GAAGAC 1 cut(s) 1341
Bbv12I GWGCWC 1 cut(s) 1180
BbvI GCAGC 4 cut(s) 325, 1048, 1476, 1682
BccI CCATC 5 cut(s) 197, 229, 410, 595, 893
BceAI ACGGC 3 cut(s) 835, 1504, 1658
BciT130I CCWGG 3 cut(s) 485, 719, 1085
BclI TGATCA 2 cut(s) 208, 1471
BcnI CCSGG 2 cut(s) 67, 368
BcoDI GTCTC 5 cut(s) 766, 1019, 1184, 1217, 1592
BfaI CTAG 2 cut(s) 1187, 1287
BfmI CTRYAG 1 cut(s) 1089
BfoI RGCGCY 1 cut(s) 484
BisI GCNGC 5 cut(s) 87, 314, 1037, 1490, 1671
BlsI GCNGC 5 cut(s) 88, 315, 1038, 1491, 1672
Bme1390I CCNGG 5 cut(s) 67, 368, 485, 719, 1085
Bme18I GGWCC 5 cut(s) 176, 381, 687, 750, 1447
BmiI GGNNCC 6 cut(s) 372, 594, 752, 1118, 1316, 1652
BmrFI CCNGG 5 cut(s) 67, 368, 485, 719, 1085
BmrI ACTGGG 2 cut(s) 519, 1164
BmsI GCATC 4 cut(s) 194, 263, 322, 908
BmuI ACTGGG 2 cut(s) 519, 1164
BpiI GAAGAC 1 cut(s) 1341
Bpu10I CCTNAGC 1 cut(s) 1395
Bpu14I TTCGAA 1 cut(s) 121
BpuEI CTTGAG 1 cut(s) 1545
BpuMI CCSGG 2 cut(s) 67, 368
BsaHI GRCGYC 3 cut(s) 387, 441, 1095
BsaI GGTCTC 3 cut(s) 766, 1019, 1592
BsaJI CCNNGG 6 cut(s) 65, 102, 717, 718, 1443, 1674
BsaWI WCCGGW 3 cut(s) 373, 775, 991
Bsc4I CCNNNNNNNGG 7 cut(s) 93, 373, 484, 1113, 1444, 1499, 1666
Bse118I RCCGGY 2 cut(s) 424, 775
Bse1I ACTGG 3 cut(s) 525, 554, 1159
Bse3DI GCAATG 1 cut(s) 1259
BseBI CCWGG 3 cut(s) 485, 719, 1085
BseDI CCNNGG 6 cut(s) 65, 102, 717, 718, 1443, 1674
BseGI GGATG 7 cut(s) 185, 201, 278, 320, 538, 1389, 1590
BseLI CCNNNNNNNGG 7 cut(s) 93, 373, 484, 1113, 1444, 1499, 1666
BseMI GCAATG 1 cut(s) 1259
BseMII CTCAG 2 cut(s) 1233, 1386
BseNI ACTGG 3 cut(s) 525, 554, 1159
BseSI GKGCMC 2 cut(s) 373, 1318
BseXI GCAGC 4 cut(s) 325, 1048, 1476, 1682
BseYI CCCAGC 1 cut(s) 477
Bsh1285I CGRYCG 2 cut(s) 1079, 1646
BshNI GGYRCC 3 cut(s) 370, 1116, 1650
BshTI ACCGGT 1 cut(s) 775
BsiEI CGRYCG 2 cut(s) 1079, 1646
BsiHKAI GWGCWC 1 cut(s) 1180
BsiSI CCGG 8 cut(s) 67, 367, 374, 425, 776, 992, 1059, 1500
BslFI GGGAC 2 cut(s) 735, 736
BslI CCNNNNNNNGG 7 cut(s) 93, 373, 484, 1113, 1444, 1499, 1666
BsmAI GTCTC 5 cut(s) 766, 1019, 1184, 1217, 1592
BsmBI CGTCTC 2 cut(s) 1184, 1217
BsmFI GGGAC 2 cut(s) 735, 736
BsmI GAATGC 2 cut(s) 251, 335
Bso31I GGTCTC 3 cut(s) 766, 1019, 1592
Bsp119I TTCGAA 1 cut(s) 121
Bsp120I GGGCCC 1 cut(s) 1314
Bsp1286I GDGCHC 4 cut(s) 373, 718, 1180, 1318
Bsp143I GATC 5 cut(s) 58, 208, 900, 1471, 1643
Bsp19I CCATGG 1 cut(s) 102
BspACI CCGC 6 cut(s) 87, 93, 107, 1326, 1594, 1700
BspCNI CTCAG 2 cut(s) 1232, 1387
BspLI GGNNCC 6 cut(s) 372, 594, 752, 1118, 1316, 1652
BspT104I TTCGAA 1 cut(s) 121
BspT107I GGYRCC 3 cut(s) 370, 1116, 1650
BspTNI GGTCTC 3 cut(s) 766, 1019, 1592
BsrDI GCAATG 1 cut(s) 1259
BsrFI RCCGGY 2 cut(s) 424, 775
BsrI ACTGG 3 cut(s) 525, 554, 1159
BssAI RCCGGY 2 cut(s) 424, 775
BssECI CCNNGG 6 cut(s) 65, 102, 717, 718, 1443, 1674
BssMI GATC 5 cut(s) 58, 208, 900, 1471, 1643
BssNI GRCGYC 3 cut(s) 387, 441, 1095
BssT1I CCWWGG 1 cut(s) 102
Bst2UI CCWGG 3 cut(s) 485, 719, 1085
Bst4CI ACNGT 5 cut(s) 77, 160, 747, 1077, 1228
Bst6I CTCTTC 3 cut(s) 834, 1621, 1625
BstACI GRCGYC 3 cut(s) 387, 441, 1095
BstBI TTCGAA 1 cut(s) 121
BstC8I GCNNGC 3 cut(s) 91, 490, 510
BstDEI CTNAG 3 cut(s) 1219, 1395, 1552
BstDSI CCRYGG 3 cut(s) 102, 1443, 1674
BstF5I GGATG 7 cut(s) 185, 201, 278, 320, 538, 1389, 1590
BstH2I RGCGCY 1 cut(s) 484
BstHHI GCGC 1 cut(s) 483
BstKTI GATC 5 cut(s) 61, 211, 903, 1474, 1646
BstMAI GTCTC 5 cut(s) 766, 1019, 1184, 1217, 1592
BstMBI GATC 5 cut(s) 58, 208, 900, 1471, 1643
BstMCI CGRYCG 2 cut(s) 1079, 1646
BstMWI GCNNNNNNNGC 7 cut(s) 152, 161, 368, 489, 1094, 1192, 1313
BstNI CCWGG 3 cut(s) 485, 719, 1085
BstNSI RCATGY 1 cut(s) 146
BstSCI CCNGG 5 cut(s) 65, 366, 483, 717, 1083
BstSFI CTRYAG 1 cut(s) 1089
BstSLI GKGCMC 2 cut(s) 373, 1318
BstV1I GCAGC 4 cut(s) 325, 1048, 1476, 1682
BstV2I GAAGAC 1 cut(s) 1341
BtgI CCRYGG 3 cut(s) 102, 1443, 1674
BtsCI GGATG 7 cut(s) 185, 201, 278, 320, 538, 1389, 1590
BtsIMutI CAGTG 2 cut(s) 752, 1350
Cac8I GCNNGC 3 cut(s) 91, 490, 510
CaiI CAGNNNCTG 1 cut(s) 484
CfoI GCGC 1 cut(s) 483
Cfr10I RCCGGY 2 cut(s) 424, 775
CseI GACGC 4 cut(s) 395, 1103, 1201, 1565
Csp6I GTAC 4 cut(s) 556, 1117, 1297, 1565
CspAI ACCGGT 1 cut(s) 775
CspCI CAANNNNNGTGG 2 cut(s) 447, 482
CviAII CATG 7 cut(s) 103, 143, 437, 781, 1231, 1259, 1583
CviQI GTAC 4 cut(s) 556, 1117, 1297, 1565
DdeI CTNAG 3 cut(s) 1219, 1395, 1552
DpnI GATC 5 cut(s) 60, 210, 902, 1473, 1645
DpnII GATC 5 cut(s) 58, 208, 900, 1471, 1643
DrdI GACNNNNNNGTC 1 cut(s) 1287
DseDI GACNNNNNNGTC 1 cut(s) 1287
EaeI YGGCCR 2 cut(s) 447, 783
Eam1104I CTCTTC 3 cut(s) 834, 1621, 1625
EarI CTCTTC 3 cut(s) 834, 1621, 1625
EciI GGCGGA 2 cut(s) 122, 1583
Eco130I CCWWGG 1 cut(s) 102
Eco24I GRGCYC 2 cut(s) 718, 1318
Eco31I GGTCTC 3 cut(s) 766, 1019, 1592
Eco47I GGWCC 5 cut(s) 176, 381, 687, 750, 1447
Eco57I CTGAAG 1 cut(s) 1035
EcoO109I RGGNCCY 2 cut(s) 1314, 1315
EcoRII CCWGG 3 cut(s) 483, 717, 1083
EcoT14I CCWWGG 1 cut(s) 102
EcoT22I ATGCAT 1 cut(s) 337
EcoT38I GRGCYC 2 cut(s) 718, 1318
ErhI CCWWGG 1 cut(s) 102
Esp3I CGTCTC 2 cut(s) 1184, 1217
FaeI CATG 7 cut(s) 106, 146, 440, 784, 1234, 1262, 1586
FalI AAGNNNNNCTT 2 cut(s) 45, 77
FaqI GGGAC 2 cut(s) 735, 736
FatI CATG 7 cut(s) 102, 142, 436, 780, 1230, 1258, 1582
FauI CCCGC 3 cut(s) 86, 1333, 1693
FauNDI CATATG 2 cut(s) 309, 909
FbaI TGATCA 2 cut(s) 208, 1471
FblI GTMKAC 1 cut(s) 529
Fnu4HI GCNGC 5 cut(s) 87, 314, 1037, 1490, 1671
FokI GGATG 7 cut(s) 172, 208, 285, 307, 525, 1376, 1577
FriOI GRGCYC 2 cut(s) 718, 1318
Fsp4HI GCNGC 5 cut(s) 87, 314, 1037, 1490, 1671
FspBI CTAG 2 cut(s) 1187, 1287
GlaI GCGC 1 cut(s) 482
GluI GCNGC 5 cut(s) 87, 314, 1037, 1490, 1671
GsaI CCCAGC 1 cut(s) 481
HaeII RGCGCY 1 cut(s) 484
HapII CCGG 8 cut(s) 67, 367, 374, 425, 776, 992, 1059, 1500
HgaI GACGC 4 cut(s) 395, 1103, 1201, 1565
HhaI GCGC 1 cut(s) 483
Hin1I GRCGYC 3 cut(s) 387, 441, 1095
Hin1II CATG 7 cut(s) 106, 146, 440, 784, 1234, 1262, 1586
Hin6I GCGC 1 cut(s) 481
HinP1I GCGC 1 cut(s) 481
HincII GTYRAC 1 cut(s) 530
HindII GTYRAC 1 cut(s) 530
HinfI GANTC 9 cut(s) 417, 723, 794, 857, 877, 988, 1103, 1340, 1379
HpaII CCGG 8 cut(s) 67, 367, 374, 425, 776, 992, 1059, 1500
HphI GGTGA 4 cut(s) 89, 343, 789, 1162
Hpy166II GTNNAC 6 cut(s) 351, 416, 530, 690, 1239, 1447
Hpy188I TCNGA 7 cut(s) 248, 385, 856, 862, 876, 1175, 1222
Hpy188III TCNNGA 4 cut(s) 193, 985, 1376, 1620
Hpy8I GTNNAC 6 cut(s) 351, 416, 530, 690, 1239, 1447
Hpy99I CGWCG 2 cut(s) 389, 446
HpyAV CCTTC 3 cut(s) 552, 701, 1178
HpyCH4III ACNGT 5 cut(s) 77, 160, 747, 1077, 1228
HpyCH4IV ACGT 4 cut(s) 441, 460, 762, 1006
HpyCH4V TGCA 7 cut(s) 4, 259, 276, 313, 335, 921, 1024
HpyF10VI GCNNNNNNNGC 7 cut(s) 152, 161, 368, 489, 1094, 1192, 1313
HpyF3I CTNAG 3 cut(s) 1219, 1395, 1552
HpySE526I ACGT 4 cut(s) 441, 460, 762, 1006
Hsp92I GRCGYC 3 cut(s) 387, 441, 1095
Hsp92II CATG 7 cut(s) 106, 146, 440, 784, 1234, 1262, 1586
HspAI GCGC 1 cut(s) 481
KpnI GGTACC 1 cut(s) 1120
Ksp22I TGATCA 2 cut(s) 208, 1471
Kzo9I GATC 5 cut(s) 58, 208, 900, 1471, 1643
LmnI GCTCC 4 cut(s) 248, 862, 1044, 1175
Lsp1109I GCAGC 4 cut(s) 325, 1048, 1476, 1682
LweI GCATC 4 cut(s) 194, 263, 322, 908
MaeI CTAG 2 cut(s) 1187, 1287
MaeII ACGT 4 cut(s) 441, 460, 762, 1006
MaeIII GTNAC 4 cut(s) 77, 215, 728, 1150
MalI GATC 5 cut(s) 60, 210, 902, 1473, 1645
MboI GATC 5 cut(s) 58, 208, 900, 1471, 1643
MboII GAAGA 8 cut(s) 53, 110, 386, 851, 1341, 1436, 1608, 1642
MhlI GDGCHC 4 cut(s) 373, 718, 1180, 1318
MlsI TGGCCA 2 cut(s) 449, 785
MluCI AATT 8 cut(s) 239, 831, 866, 979, 1121, 1365, 1371, 1495
MluNI TGGCCA 2 cut(s) 449, 785
MlyI GAGTC 4 cut(s) 411, 717, 851, 1097
MmeI TCCRAC 5 cut(s) 161, 226, 408, 570, 603
Mox20I TGGCCA 2 cut(s) 449, 785
Mph1103I ATGCAT 1 cut(s) 337
MscI TGGCCA 2 cut(s) 449, 785
MseI TTAA 5 cut(s) 933, 1266, 1692, 1724, 1735
MslI CAYNNNNRTG 3 cut(s) 194, 376, 950
Msp20I TGGCCA 2 cut(s) 449, 785
MspA1I CMGCKG 3 cut(s) 89, 735, 1328
MspI CCGG 8 cut(s) 67, 367, 374, 425, 776, 992, 1059, 1500
MspR9I CCNGG 5 cut(s) 67, 368, 485, 719, 1085
Mva1269I GAATGC 2 cut(s) 251, 335
MvaI CCWGG 3 cut(s) 485, 719, 1085
MwoI GCNNNNNNNGC 7 cut(s) 152, 161, 368, 489, 1094, 1192, 1313
NciI CCSGG 2 cut(s) 67, 368
NcoI CCATGG 1 cut(s) 102
NdeI CATATG 2 cut(s) 309, 909
NdeII GATC 5 cut(s) 58, 208, 900, 1471, 1643
NlaIII CATG 7 cut(s) 106, 146, 440, 784, 1234, 1262, 1586
NlaIV GGNNCC 6 cut(s) 372, 594, 752, 1118, 1316, 1652
NmuCI GTSAC 2 cut(s) 77, 1150
NsiI ATGCAT 1 cut(s) 337
NspI RCATGY 1 cut(s) 146
NspV TTCGAA 1 cut(s) 121
PasI CCCWGGG 1 cut(s) 718
PcsI WCGNNNNNNNCGW 1 cut(s) 118
PctI GAATGC 2 cut(s) 251, 335
PfeI GAWTC 5 cut(s) 794, 877, 988, 1340, 1379
PflMI CCANNNNNTGG 1 cut(s) 484
PinAI ACCGGT 1 cut(s) 775
PkrI GCNGC 5 cut(s) 88, 315, 1038, 1491, 1672
Ple19I CGATCG 1 cut(s) 1646
PleI GAGTC 4 cut(s) 411, 717, 851, 1097
PpsI GAGTC 4 cut(s) 411, 717, 851, 1097
Psp6I CCWGG 3 cut(s) 483, 717, 1083
PspFI CCCAGC 1 cut(s) 477
PspGI CCWGG 3 cut(s) 483, 717, 1083
PspN4I GGNNCC 6 cut(s) 372, 594, 752, 1118, 1316, 1652
PspOMI GGGCCC 1 cut(s) 1314
PstNI CAGNNNCTG 1 cut(s) 484
PvuI CGATCG 1 cut(s) 1646
PvuII CAGCTG 1 cut(s) 735
RsaI GTAC 4 cut(s) 557, 1118, 1298, 1566
RsaNI GTAC 4 cut(s) 556, 1117, 1297, 1565
RseI CAYNNNNRTG 3 cut(s) 194, 376, 950
SalI GTCGAC 1 cut(s) 528
SaqAI TTAA 5 cut(s) 933, 1266, 1692, 1724, 1735
SatI GCNGC 5 cut(s) 87, 314, 1037, 1490, 1671
Sau3AI GATC 5 cut(s) 58, 208, 900, 1471, 1643
SchI GAGTC 4 cut(s) 411, 717, 851, 1097
ScrFI CCNGG 5 cut(s) 67, 368, 485, 719, 1085
SduI GDGCHC 4 cut(s) 373, 718, 1180, 1318
SfaNI GCATC 4 cut(s) 194, 263, 322, 908
SfcI CTRYAG 1 cut(s) 1089
SfuI TTCGAA 1 cut(s) 121
SinI GGWCC 5 cut(s) 176, 381, 687, 750, 1447
SmiMI CAYNNNNRTG 3 cut(s) 194, 376, 950
SmlI CTYRAG 1 cut(s) 1560
SmoI CTYRAG 1 cut(s) 1560
Sse9I AATT 8 cut(s) 239, 831, 866, 979, 1121, 1365, 1371, 1495
SsiI CCGC 6 cut(s) 87, 93, 107, 1326, 1594, 1700
SspI AATATT 1 cut(s) 133
SspMI CTAG 2 cut(s) 1187, 1287
StyD4I CCNGG 5 cut(s) 65, 366, 483, 717, 1083
StyI CCWWGG 1 cut(s) 102
TaaI ACNGT 5 cut(s) 77, 160, 747, 1077, 1228
TaiI ACGT 4 cut(s) 444, 463, 765, 1009
TaqI TCGA 4 cut(s) 121, 529, 1079, 1477
TaqII GACCGA 3 cut(s) 193, 893, 957
TasI AATT 8 cut(s) 239, 831, 866, 979, 1121, 1365, 1371, 1495
TatI WGTACW 1 cut(s) 1564
TauI GCSGC 1 cut(s) 89
TfiI GAWTC 5 cut(s) 794, 877, 988, 1340, 1379
Tru1I TTAA 5 cut(s) 933, 1266, 1692, 1724, 1735
Tru9I TTAA 5 cut(s) 933, 1266, 1692, 1724, 1735
TscAI CASTG 2 cut(s) 752, 1350
TseFI GTSAC 2 cut(s) 77, 1150
TseI GCWGC 4 cut(s) 313, 1036, 1489, 1670
Tsp45I GTSAC 2 cut(s) 77, 1150
TspDTI ATGAA 8 cut(s) 212, 328, 513, 756, 919, 1192, 1437, 1523
TspRI CASTG 2 cut(s) 752, 1350
Van91I CCANNNNNTGG 1 cut(s) 484
VpaK11BI GGWCC 5 cut(s) 176, 381, 687, 750, 1447
XapI RAATTY 1 cut(s) 979
XceI RCATGY 1 cut(s) 146
XcmI CCANNNNNNNNNTGG 2 cut(s) 228, 761
XmiI GTMKAC 1 cut(s) 529
XspI CTAG 2 cut(s) 1187, 1287
ZraI GACGTC 1 cut(s) 442
Zsp2I ATGCAT 1 cut(s) 337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.