Belongs to the universal ribosomal protein uS5 family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ribosomal_S5_C | PF03719 | 7 - 54 | 5.6e-13 | Ribosomal protein S5, C-terminal domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 49 |
| AccI | GTMKAC | 1 cut(s) | 149 |
| AjnI | CCWGG | 1 cut(s) | 140 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 86, 118 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 101 |
| AsuHPI | GGTGA | 2 cut(s) | 7, 134 |
| BanI | GGYRCC | 1 cut(s) | 49 |
| BauI | CACGAG | 1 cut(s) | 60 |
| BccI | CCATC | 1 cut(s) | 40 |
| BciT130I | CCWGG | 1 cut(s) | 142 |
| BfaI | CTAG | 1 cut(s) | 84 |
| Bme1390I | CCNGG | 1 cut(s) | 142 |
| BmiI | GGNNCC | 2 cut(s) | 51, 90 |
| BmrFI | CCNGG | 1 cut(s) | 142 |
| BsaJI | CCNNGG | 1 cut(s) | 141 |
| BsaWI | WCCGGW | 1 cut(s) | 17 |
| Bse3DI | GCAATG | 1 cut(s) | 4 |
| BseBI | CCWGG | 1 cut(s) | 142 |
| BseDI | CCNNGG | 1 cut(s) | 141 |
| BseGI | GGATG | 2 cut(s) | 51, 137 |
| BseMI | GCAATG | 1 cut(s) | 4 |
| BseRI | GAGGAG | 1 cut(s) | 48 |
| BshNI | GGYRCC | 1 cut(s) | 49 |
| BsiSI | CCGG | 1 cut(s) | 18 |
| BspLI | GGNNCC | 2 cut(s) | 51, 90 |
| BspT107I | GGYRCC | 1 cut(s) | 49 |
| BsrDI | GCAATG | 1 cut(s) | 4 |
| BssECI | CCNNGG | 1 cut(s) | 141 |
| BssSI | CACGAG | 1 cut(s) | 60 |
| Bst2BI | CACGAG | 1 cut(s) | 60 |
| Bst2UI | CCWGG | 1 cut(s) | 142 |
| BstC8I | GCNNGC | 1 cut(s) | 54 |
| BstEII | GGTNACC | 1 cut(s) | 13 |
| BstF5I | GGATG | 2 cut(s) | 51, 137 |
| BstNI | CCWGG | 1 cut(s) | 142 |
| BstPI | GGTNACC | 1 cut(s) | 13 |
| BstSCI | CCNGG | 1 cut(s) | 140 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 113 |
| BtsCI | GGATG | 2 cut(s) | 51, 137 |
| Cac8I | GCNNGC | 1 cut(s) | 54 |
| CviJI | RGCY | 2 cut(s) | 30, 83 |
| CviKI_1 | RGCY | 2 cut(s) | 30, 83 |
| Eco91I | GGTNACC | 1 cut(s) | 13 |
| EcoO65I | GGTNACC | 1 cut(s) | 13 |
| EcoRII | CCWGG | 1 cut(s) | 140 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaiI | YATR | 1 cut(s) | 77 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 14, 46 |
| FblI | GTMKAC | 1 cut(s) | 149 |
| FokI | GGATG | 2 cut(s) | 58, 124 |
| FspBI | CTAG | 1 cut(s) | 84 |
| HapII | CCGG | 1 cut(s) | 18 |
| HinfI | GANTC | 1 cut(s) | 157 |
| HpaII | CCGG | 1 cut(s) | 18 |
| HphI | GGTGA | 2 cut(s) | 7, 134 |
| Hpy166II | GTNNAC | 2 cut(s) | 132, 150 |
| Hpy188III | TCNNGA | 1 cut(s) | 161 |
| Hpy8I | GTNNAC | 2 cut(s) | 132, 150 |
| HpyAV | CCTTC | 1 cut(s) | 91 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 9 |
| LmnI | GCTCC | 1 cut(s) | 61 |
| LpnPI | CCDG | 5 cut(s) | 31, 66, 99, 127, 154 |
| MaeI | CTAG | 1 cut(s) | 84 |
| MaeIII | GTNAC | 1 cut(s) | 13 |
| MluCI | AATT | 1 cut(s) | 107 |
| MlyI | GAGTC | 1 cut(s) | 151 |
| MnlI | CCTC | 1 cut(s) | 69 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MroXI | GAANNNNTTC | 1 cut(s) | 101 |
| MspI | CCGG | 1 cut(s) | 18 |
| MspR9I | CCNGG | 1 cut(s) | 142 |
| MvaI | CCWGG | 1 cut(s) | 142 |
| NlaIV | GGNNCC | 2 cut(s) | 51, 90 |
| NmuCI | GTSAC | 1 cut(s) | 13 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| PdmI | GAANNNNTTC | 1 cut(s) | 101 |
| PleI | GAGTC | 1 cut(s) | 151 |
| PpsI | GAGTC | 1 cut(s) | 151 |
| Psp6I | CCWGG | 1 cut(s) | 140 |
| PspEI | GGTNACC | 1 cut(s) | 13 |
| PspGI | CCWGG | 1 cut(s) | 140 |
| PspN4I | GGNNCC | 2 cut(s) | 51, 90 |
| SchI | GAGTC | 1 cut(s) | 151 |
| ScrFI | CCNGG | 1 cut(s) | 142 |
| SetI | ASST | 3 cut(s) | 15, 73, 102 |
| Sse9I | AATT | 1 cut(s) | 107 |
| SspMI | CTAG | 1 cut(s) | 84 |
| StyD4I | CCNGG | 1 cut(s) | 140 |
| TaqI | TCGA | 1 cut(s) | 162 |
| TasI | AATT | 1 cut(s) | 107 |
| TseFI | GTSAC | 1 cut(s) | 13 |
| Tsp45I | GTSAC | 1 cut(s) | 13 |
| TspDTI | ATGAA | 1 cut(s) | 126 |
| XmiI | GTMKAC | 1 cut(s) | 149 |
| XmnI | GAANNNNTTC | 1 cut(s) | 101 |
| XspI | CTAG | 1 cut(s) | 84 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |