Belongs to the universal ribosomal protein uS5 family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 11 - 188 | 5.2e-49 | TIR domain |
| TIR_2 | PF13676 | 14 - 111 | 7.2e-13 | TIR domain |
| NB-ARC | PF00931 | 214 - 368 | 3.5e-21 | NB-ARC domain |
| AAA_22 | PF13401 | 216 - 315 | 1.9e-06 | AAA domain |
| NACHT | PF05729 | 218 - 316 | 5e-08 | NACHT domain |
| WHD_ROQ1 | PF23282 | 435 - 506 | 1.2e-21 | Disease resistance protein Roq1-like, winged-helix domain |
| LRR_13 | PF23286 | 695 - 779 | 2.8e-10 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_14 | PF23598 | 706 - 774 | 7.7e-09 | Leucine-rich repeat region |
| C-JID | PF20160 | 1002 - 1151 | 6.7e-19 | C-JID domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1925 |
| Acc36I | ACCTGC | 3 cut(s) | 746, 1925, 3082 |
| AccB1I | GGYRCC | 1 cut(s) | 342 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1612, 3148 |
| AccI | GTMKAC | 3 cut(s) | 551, 886, 2797 |
| AciI | CCGC | 6 cut(s) | 70, 340, 595, 629, 670, 2560 |
| AclI | AACGTT | 1 cut(s) | 2158 |
| AclWI | GGATC | 9 cut(s) | 320, 333, 652, 665, 927, 1371, 2460, 2473, 2491 |
| AcoI | YGGCCR | 1 cut(s) | 462 |
| AcuI | CTGAAG | 5 cut(s) | 1598, 2691, 2969, 3233, 3425 |
| AcyI | GRCGYC | 1 cut(s) | 5 |
| AfaI | GTAC | 2 cut(s) | 2824, 3129 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1409, 1612, 2573, 3148, 3536 |
| AflII | CTTAAG | 1 cut(s) | 1774 |
| AjnI | CCWGG | 4 cut(s) | 139, 1528, 3007, 3282 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 726, 758, 2729, 2761 |
| Alw21I | GWGCWC | 1 cut(s) | 366 |
| AlwI | GGATC | 9 cut(s) | 320, 333, 652, 665, 927, 1371, 2460, 2473, 2491 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 860 |
| Ama87I | CYCGRG | 1 cut(s) | 696 |
| AoxI | GGCC | 7 cut(s) | 167, 292, 462, 778, 1720, 2227, 3395 |
| ApeKI | GCWGC | 3 cut(s) | 182, 631, 860 |
| AseI | ATTAAT | 1 cut(s) | 2099 |
| Asp700I | GAANNNNTTC | 8 cut(s) | 105, 589, 801, 1071, 1503, 1597, 2954, 2991 |
| AspS9I | GGNCC | 4 cut(s) | 292, 373, 1708, 3395 |
| AsuHPI | GGTGA | 7 cut(s) | 115, 213, 1441, 2633, 2677, 3290, 3421 |
| AvaI | CYCGRG | 1 cut(s) | 696 |
| AvaII | GGWCC | 2 cut(s) | 373, 1708 |
| BaeGI | GKGCMC | 1 cut(s) | 397 |
| BalI | TGGCCA | 1 cut(s) | 464 |
| BamHI | GGATCC | 3 cut(s) | 325, 657, 2465 |
| BanI | GGYRCC | 1 cut(s) | 342 |
| BanII | GRGCYC | 1 cut(s) | 366 |
| BauI | CACGAG | 2 cut(s) | 1178, 3321 |
| BbsI | GAAGAC | 3 cut(s) | 304, 1566, 2957 |
| Bbv12I | GWGCWC | 1 cut(s) | 366 |
| BbvI | GCAGC | 3 cut(s) | 169, 643, 847 |
| BceAI | ACGGC | 2 cut(s) | 679, 2234 |
| BciT130I | CCWGG | 4 cut(s) | 141, 1530, 3009, 3284 |
| BciVI | GTATCC | 1 cut(s) | 1779 |
| BfaI | CTAG | 2 cut(s) | 198, 782 |
| BfmI | CTRYAG | 1 cut(s) | 2254 |
| BfrI | CTTAAG | 1 cut(s) | 1774 |
| BfuAI | ACCTGC | 3 cut(s) | 746, 1925, 3082 |
| BfuI | GTATCC | 1 cut(s) | 1779 |
| BglII | AGATCT | 4 cut(s) | 200, 1433, 1778, 1960 |
| BisI | GCNGC | 4 cut(s) | 183, 341, 632, 861 |
| BlsI | GCNGC | 4 cut(s) | 184, 342, 633, 862 |
| Bme1390I | CCNGG | 4 cut(s) | 141, 1530, 3009, 3284 |
| Bme18I | GGWCC | 2 cut(s) | 373, 1708 |
| BmeT110I | CYCGRG | 1 cut(s) | 696 |
| BmgT120I | GGNCC | 4 cut(s) | 292, 373, 1708, 3395 |
| BmiI | GGNNCC | 6 cut(s) | 327, 344, 374, 375, 659, 2467 |
| BmrFI | CCNGG | 4 cut(s) | 141, 1530, 3009, 3284 |
| BmrI | ACTGGG | 1 cut(s) | 1773 |
| BmsI | GCATC | 4 cut(s) | 1458, 2315, 2836, 2858 |
| BmuI | ACTGGG | 1 cut(s) | 1773 |
| BpiI | GAAGAC | 3 cut(s) | 304, 1566, 2957 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1158 |
| BpuEI | CTTGAG | 6 cut(s) | 167, 1765, 1970, 2039, 2753, 3392 |
| BsaBI | GATNNNNATC | 2 cut(s) | 918, 1362 |
| BsaHI | GRCGYC | 1 cut(s) | 5 |
| BsaI | GGTCTC | 2 cut(s) | 1557, 2435 |
| BsaJI | CCNNGG | 6 cut(s) | 139, 140, 661, 1606, 2002, 2425 |
| BsaWI | WCCGGW | 1 cut(s) | 3529 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1409, 1612, 2573, 3148, 3536 |
| Bse1I | ACTGG | 5 cut(s) | 965, 1305, 1768, 3546, 3559 |
| Bse3DI | GCAATG | 1 cut(s) | 79 |
| Bse8I | GATNNNNATC | 2 cut(s) | 918, 1362 |
| BseBI | CCWGG | 4 cut(s) | 141, 1530, 3009, 3284 |
| BseDI | CCNNGG | 6 cut(s) | 139, 140, 661, 1606, 2002, 2425 |
| BseGI | GGATG | 9 cut(s) | 139, 259, 1309, 1473, 1976, 2330, 2370, 2927, 3495 |
| BseJI | GATNNNNATC | 2 cut(s) | 918, 1362 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1409, 1612, 2573, 3148, 3536 |
| BseMI | GCAATG | 1 cut(s) | 79 |
| BseMII | CTCAG | 4 cut(s) | 1172, 2213, 2594, 3015 |
| BseNI | ACTGG | 5 cut(s) | 965, 1305, 1768, 3546, 3559 |
| BseRI | GAGGAG | 1 cut(s) | 1742 |
| BseSI | GKGCMC | 1 cut(s) | 397 |
| BseXI | GCAGC | 3 cut(s) | 169, 643, 847 |
| BseYI | CCCAGC | 2 cut(s) | 638, 1494 |
| BsgI | GTGCAG | 2 cut(s) | 2549, 3060 |
| BshFI | GGCC | 7 cut(s) | 169, 294, 464, 780, 1722, 2229, 3397 |
| BshNI | GGYRCC | 1 cut(s) | 342 |
| BsiHKAI | GWGCWC | 1 cut(s) | 366 |
| BsiHKCI | CYCGRG | 1 cut(s) | 696 |
| BsiSI | CCGG | 1 cut(s) | 3530 |
| BslFI | GGGAC | 2 cut(s) | 386, 2197 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1409, 1612, 2573, 3148, 3536 |
| BsmFI | GGGAC | 2 cut(s) | 386, 2197 |
| BsmI | GAATGC | 3 cut(s) | 117, 597, 2712 |
| BsnI | GGCC | 7 cut(s) | 169, 294, 464, 780, 1722, 2229, 3397 |
| Bso31I | GGTCTC | 2 cut(s) | 1557, 2435 |
| BsoBI | CYCGRG | 1 cut(s) | 696 |
| Bsp1286I | GDGCHC | 2 cut(s) | 366, 397 |
| Bsp19I | CCATGG | 1 cut(s) | 2425 |
| BspACI | CCGC | 6 cut(s) | 70, 340, 595, 629, 670, 2560 |
| BspANI | GGCC | 7 cut(s) | 169, 294, 464, 780, 1722, 2229, 3397 |
| BspCNI | CTCAG | 4 cut(s) | 1171, 2214, 2595, 3016 |
| BspHI | TCATGA | 2 cut(s) | 601, 1555 |
| BspLI | GGNNCC | 6 cut(s) | 327, 344, 374, 375, 659, 2467 |
| BspMAI | CTGCAG | 1 cut(s) | 2258 |
| BspMI | ACCTGC | 3 cut(s) | 746, 1925, 3082 |
| BspPI | GGATC | 9 cut(s) | 320, 333, 652, 665, 927, 1371, 2460, 2473, 2491 |
| BspT107I | GGYRCC | 1 cut(s) | 342 |
| BspTI | CTTAAG | 1 cut(s) | 1774 |
| BspTNI | GGTCTC | 2 cut(s) | 1557, 2435 |
| BsrDI | GCAATG | 1 cut(s) | 79 |
| BsrI | ACTGG | 5 cut(s) | 965, 1305, 1768, 3546, 3559 |
| BssECI | CCNNGG | 6 cut(s) | 139, 140, 661, 1606, 2002, 2425 |
| BssNAI | GTATAC | 2 cut(s) | 552, 2798 |
| BssNI | GRCGYC | 1 cut(s) | 5 |
| BssSI | CACGAG | 2 cut(s) | 1178, 3321 |
| BssT1I | CCWWGG | 3 cut(s) | 1606, 2002, 2425 |
| Bst1107I | GTATAC | 2 cut(s) | 552, 2798 |
| Bst2BI | CACGAG | 2 cut(s) | 1178, 3321 |
| Bst2UI | CCWGG | 4 cut(s) | 141, 1530, 3009, 3284 |
| Bst4CI | ACNGT | 6 cut(s) | 1061, 1464, 1515, 2372, 3092, 3359 |
| Bst6I | CTCTTC | 1 cut(s) | 19 |
| BstACI | GRCGYC | 1 cut(s) | 5 |
| BstAFI | CTTAAG | 1 cut(s) | 1774 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 1477, 3448, 3567 |
| BstC8I | GCNNGC | 8 cut(s) | 479, 636, 668, 1339, 1394, 2564, 3255, 3572 |
| BstDEI | CTNAG | 9 cut(s) | 47, 509, 1158, 2222, 2246, 2603, 2678, 2727, 3024 |
| BstDSI | CCRYGG | 2 cut(s) | 661, 2425 |
| BstEII | GGTNACC | 1 cut(s) | 2665 |
| BstF5I | GGATG | 9 cut(s) | 139, 259, 1309, 1473, 1976, 2330, 2370, 2927, 3495 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 672, 1477, 2728, 3116, 3448, 3558, 3567 |
| BstNI | CCWGG | 4 cut(s) | 141, 1530, 3009, 3284 |
| BstNSI | RCATGY | 1 cut(s) | 670 |
| BstPI | GGTNACC | 1 cut(s) | 2665 |
| BstSCI | CCNGG | 4 cut(s) | 139, 1528, 3007, 3282 |
| BstSFI | CTRYAG | 1 cut(s) | 2254 |
| BstSLI | GKGCMC | 1 cut(s) | 397 |
| BstV1I | GCAGC | 3 cut(s) | 169, 643, 847 |
| BstV2I | GAAGAC | 3 cut(s) | 304, 1566, 2957 |
| BstX2I | RGATCY | 8 cut(s) | 200, 325, 657, 1433, 1778, 1960, 2465, 2483 |
| BstYI | RGATCY | 8 cut(s) | 200, 325, 657, 1433, 1778, 1960, 2465, 2483 |
| BstZ17I | GTATAC | 2 cut(s) | 552, 2798 |
| BsuI | GTATCC | 1 cut(s) | 1779 |
| BsuRI | GGCC | 7 cut(s) | 169, 294, 464, 780, 1722, 2229, 3397 |
| BtgI | CCRYGG | 2 cut(s) | 661, 2425 |
| BtsCI | GGATG | 9 cut(s) | 139, 259, 1309, 1473, 1976, 2330, 2370, 2927, 3495 |
| BtsIMutI | CAGTG | 3 cut(s) | 1212, 3552, 3553 |
| BveI | ACCTGC | 3 cut(s) | 746, 1925, 3082 |
| Cac8I | GCNNGC | 8 cut(s) | 479, 636, 668, 1339, 1394, 2564, 3255, 3572 |
| CaiI | CAGNNNCTG | 1 cut(s) | 860 |
| CciI | TCATGA | 2 cut(s) | 601, 1555 |
| Cfr13I | GGNCC | 4 cut(s) | 292, 373, 1708, 3395 |
| Csp6I | GTAC | 2 cut(s) | 2823, 3128 |
| CviQI | GTAC | 2 cut(s) | 2823, 3128 |
| DdeI | CTNAG | 9 cut(s) | 47, 509, 1158, 2222, 2246, 2603, 2678, 2727, 3024 |
| DraI | TTTAAA | 3 cut(s) | 1798, 2490, 3385 |
| EaeI | YGGCCR | 1 cut(s) | 462 |
| Eam1104I | CTCTTC | 1 cut(s) | 19 |
| EarI | CTCTTC | 1 cut(s) | 19 |
| Ecl136II | GAGCTC | 1 cut(s) | 364 |
| Eco130I | CCWWGG | 3 cut(s) | 1606, 2002, 2425 |
| Eco147I | AGGCCT | 2 cut(s) | 169, 1722 |
| Eco24I | GRGCYC | 1 cut(s) | 366 |
| Eco31I | GGTCTC | 2 cut(s) | 1557, 2435 |
| Eco47I | GGWCC | 2 cut(s) | 373, 1708 |
| Eco53kI | GAGCTC | 1 cut(s) | 364 |
| Eco57I | CTGAAG | 5 cut(s) | 1598, 2691, 2969, 3233, 3425 |
| Eco88I | CYCGRG | 1 cut(s) | 696 |
| Eco91I | GGTNACC | 1 cut(s) | 2665 |
| EcoICRI | GAGCTC | 1 cut(s) | 364 |
| EcoO109I | RGGNCCY | 1 cut(s) | 373 |
| EcoO65I | GGTNACC | 1 cut(s) | 2665 |
| EcoRI | GAATTC | 1 cut(s) | 3170 |
| EcoRII | CCWGG | 4 cut(s) | 139, 1528, 3007, 3282 |
| EcoT14I | CCWWGG | 3 cut(s) | 1606, 2002, 2425 |
| EcoT22I | ATGCAT | 3 cut(s) | 281, 1473, 2851 |
| EcoT38I | GRGCYC | 1 cut(s) | 366 |
| ErhI | CCWWGG | 3 cut(s) | 1606, 2002, 2425 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 786, 818 |
| FaqI | GGGAC | 2 cut(s) | 386, 2197 |
| FauI | CCCGC | 3 cut(s) | 77, 602, 663 |
| FblI | GTMKAC | 3 cut(s) | 551, 886, 2797 |
| Fnu4HI | GCNGC | 4 cut(s) | 183, 341, 632, 861 |
| FokI | GGATG | 9 cut(s) | 146, 266, 1316, 1480, 1983, 2337, 2377, 2934, 3502 |
| FriOI | GRGCYC | 1 cut(s) | 366 |
| Fsp4HI | GCNGC | 4 cut(s) | 183, 341, 632, 861 |
| FspBI | CTAG | 2 cut(s) | 198, 782 |
| GluI | GCNGC | 4 cut(s) | 183, 341, 632, 861 |
| GsaI | CCCAGC | 2 cut(s) | 642, 1498 |
| HaeIII | GGCC | 7 cut(s) | 169, 294, 464, 780, 1722, 2229, 3397 |
| HapII | CCGG | 1 cut(s) | 3530 |
| Hin1I | GRCGYC | 1 cut(s) | 5 |
| HincII | GTYRAC | 4 cut(s) | 9, 927, 1048, 1626 |
| HindII | GTYRAC | 4 cut(s) | 9, 927, 1048, 1626 |
| HindIII | AAGCTT | 3 cut(s) | 2018, 2729, 3155 |
| HpaI | GTTAAC | 1 cut(s) | 1048 |
| HpaII | CCGG | 1 cut(s) | 3530 |
| HphI | GGTGA | 7 cut(s) | 115, 213, 1441, 2633, 2677, 3290, 3421 |
| Hpy166II | GTNNAC | 9 cut(s) | 9, 552, 887, 927, 1048, 1511, 1626, 1708, 2798 |
| Hpy8I | GTNNAC | 9 cut(s) | 9, 552, 887, 927, 1048, 1511, 1626, 1708, 2798 |
| Hpy99I | CGWCG | 1 cut(s) | 24 |
| HpyCH4III | ACNGT | 6 cut(s) | 1061, 1464, 1515, 2372, 3092, 3359 |
| HpyCH4IV | ACGT | 2 cut(s) | 1537, 2158 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 672, 1477, 2728, 3116, 3448, 3558, 3567 |
| HpyF3I | CTNAG | 9 cut(s) | 47, 509, 1158, 2222, 2246, 2603, 2678, 2727, 3024 |
| HpySE526I | ACGT | 2 cut(s) | 1537, 2158 |
| Hsp92I | GRCGYC | 1 cut(s) | 5 |
| KflI | GGGWCCC | 1 cut(s) | 373 |
| KspAI | GTTAAC | 1 cut(s) | 1048 |
| LmnI | GCTCC | 2 cut(s) | 857, 2627 |
| Lsp1109I | GCAGC | 3 cut(s) | 169, 643, 847 |
| LweI | GCATC | 4 cut(s) | 1458, 2315, 2836, 2858 |
| MaeI | CTAG | 2 cut(s) | 198, 782 |
| MaeII | ACGT | 2 cut(s) | 1537, 2158 |
| MaeIII | GTNAC | 3 cut(s) | 1369, 2648, 2665 |
| MfeI | CAATTG | 2 cut(s) | 2211, 2893 |
| MflI | RGATCY | 8 cut(s) | 200, 325, 657, 1433, 1778, 1960, 2465, 2483 |
| MhlI | GDGCHC | 2 cut(s) | 366, 397 |
| MlsI | TGGCCA | 1 cut(s) | 464 |
| MluNI | TGGCCA | 1 cut(s) | 464 |
| MlyI | GAGTC | 5 cut(s) | 188, 1743, 2068, 3409, 3432 |
| MmeI | TCCRAC | 1 cut(s) | 2125 |
| Mox20I | TGGCCA | 1 cut(s) | 464 |
| Mph1103I | ATGCAT | 3 cut(s) | 281, 1473, 2851 |
| MroXI | GAANNNNTTC | 8 cut(s) | 105, 589, 801, 1071, 1503, 1597, 2954, 2991 |
| MscI | TGGCCA | 1 cut(s) | 464 |
| MslI | CAYNNNNRTG | 3 cut(s) | 584, 1616, 3042 |
| Msp20I | TGGCCA | 1 cut(s) | 464 |
| MspCI | CTTAAG | 1 cut(s) | 1774 |
| MspI | CCGG | 1 cut(s) | 3530 |
| MspR9I | CCNGG | 4 cut(s) | 141, 1530, 3009, 3284 |
| MunI | CAATTG | 2 cut(s) | 2211, 2893 |
| Mva1269I | GAATGC | 3 cut(s) | 117, 597, 2712 |
| MvaI | CCWGG | 4 cut(s) | 141, 1530, 3009, 3284 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 672, 1477, 2728, 3116, 3448, 3558, 3567 |
| NcoI | CCATGG | 1 cut(s) | 2425 |
| NlaIV | GGNNCC | 6 cut(s) | 327, 344, 374, 375, 659, 2467 |
| NmeAIII | GCCGAG | 2 cut(s) | 2316, 3423 |
| NmuCI | GTSAC | 2 cut(s) | 1369, 2665 |
| NsiI | ATGCAT | 3 cut(s) | 281, 1473, 2851 |
| NspI | RCATGY | 1 cut(s) | 670 |
| PaeI | GCATGC | 1 cut(s) | 670 |
| PaeR7I | CTCGAG | 1 cut(s) | 696 |
| PagI | TCATGA | 2 cut(s) | 601, 1555 |
| PaqCI | CACCTGC | 1 cut(s) | 1925 |
| PasI | CCCWGGG | 1 cut(s) | 140 |
| PceI | AGGCCT | 2 cut(s) | 169, 1722 |
| PctI | GAATGC | 3 cut(s) | 117, 597, 2712 |
| PdmI | GAANNNNTTC | 8 cut(s) | 105, 589, 801, 1071, 1503, 1597, 2954, 2991 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1612, 3148 |
| PkrI | GCNGC | 4 cut(s) | 184, 342, 633, 862 |
| PleI | GAGTC | 5 cut(s) | 188, 1743, 2067, 3408, 3431 |
| PpsI | GAGTC | 5 cut(s) | 188, 1743, 2067, 3408, 3431 |
| PpuMI | RGGWCCY | 1 cut(s) | 373 |
| PshBI | ATTAAT | 1 cut(s) | 2099 |
| Psp124BI | GAGCTC | 1 cut(s) | 366 |
| Psp1406I | AACGTT | 1 cut(s) | 2158 |
| Psp5II | RGGWCCY | 1 cut(s) | 373 |
| Psp6I | CCWGG | 4 cut(s) | 139, 1528, 3007, 3282 |
| PspEI | GGTNACC | 1 cut(s) | 2665 |
| PspFI | CCCAGC | 2 cut(s) | 638, 1494 |
| PspGI | CCWGG | 4 cut(s) | 139, 1528, 3007, 3282 |
| PspN4I | GGNNCC | 6 cut(s) | 327, 344, 374, 375, 659, 2467 |
| PspPI | GGNCC | 4 cut(s) | 292, 373, 1708, 3395 |
| PspPPI | RGGWCCY | 1 cut(s) | 373 |
| PspXI | VCTCGAGB | 1 cut(s) | 696 |
| PstI | CTGCAG | 1 cut(s) | 2258 |
| PstNI | CAGNNNCTG | 1 cut(s) | 860 |
| PsuI | RGATCY | 8 cut(s) | 200, 325, 657, 1433, 1778, 1960, 2465, 2483 |
| RsaI | GTAC | 2 cut(s) | 2824, 3129 |
| RsaNI | GTAC | 2 cut(s) | 2823, 3128 |
| RseI | CAYNNNNRTG | 3 cut(s) | 584, 1616, 3042 |
| SacI | GAGCTC | 1 cut(s) | 366 |
| SatI | GCNGC | 4 cut(s) | 183, 341, 632, 861 |
| Sau96I | GGNCC | 4 cut(s) | 292, 373, 1708, 3395 |
| SchI | GAGTC | 5 cut(s) | 188, 1743, 2068, 3409, 3432 |
| ScrFI | CCNGG | 4 cut(s) | 141, 1530, 3009, 3284 |
| SduI | GDGCHC | 2 cut(s) | 366, 397 |
| SfaNI | GCATC | 4 cut(s) | 1458, 2315, 2836, 2858 |
| SfcI | CTRYAG | 1 cut(s) | 2254 |
| Sfr274I | CTCGAG | 1 cut(s) | 696 |
| SinI | GGWCC | 2 cut(s) | 373, 1708 |
| SlaI | CTCGAG | 1 cut(s) | 696 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 584, 1616, 3042 |
| SmlI | CTYRAG | 8 cut(s) | 146, 696, 1744, 1774, 1949, 2054, 2732, 3371 |
| SmoI | CTYRAG | 8 cut(s) | 146, 696, 1744, 1774, 1949, 2054, 2732, 3371 |
| SphI | GCATGC | 1 cut(s) | 670 |
| SseBI | AGGCCT | 2 cut(s) | 169, 1722 |
| SsiI | CCGC | 6 cut(s) | 70, 340, 595, 629, 670, 2560 |
| SspI | AATATT | 3 cut(s) | 1380, 3019, 3332 |
| SspMI | CTAG | 2 cut(s) | 198, 782 |
| SstI | GAGCTC | 1 cut(s) | 366 |
| StuI | AGGCCT | 2 cut(s) | 169, 1722 |
| StyD4I | CCNGG | 4 cut(s) | 139, 1528, 3007, 3282 |
| StyI | CCWWGG | 3 cut(s) | 1606, 2002, 2425 |
| TaaI | ACNGT | 6 cut(s) | 1061, 1464, 1515, 2372, 3092, 3359 |
| TaiI | ACGT | 2 cut(s) | 1540, 2161 |
| TaqI | TCGA | 5 cut(s) | 697, 1755, 1872, 2716, 3219 |
| TatI | WGTACW | 2 cut(s) | 2822, 3127 |
| TauI | GCSGC | 1 cut(s) | 343 |
| TscAI | CASTG | 3 cut(s) | 1219, 3553, 3559 |
| TseFI | GTSAC | 2 cut(s) | 1369, 2665 |
| TseI | GCWGC | 3 cut(s) | 182, 631, 860 |
| Tsp45I | GTSAC | 2 cut(s) | 1369, 2665 |
| TspGWI | ACGGA | 2 cut(s) | 535, 3416 |
| TspRI | CASTG | 3 cut(s) | 1219, 3553, 3559 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1612, 3148 |
| Vha464I | CTTAAG | 1 cut(s) | 1774 |
| VpaK11BI | GGWCC | 2 cut(s) | 373, 1708 |
| VspI | ATTAAT | 1 cut(s) | 2099 |
| XbaI | TCTAGA | 1 cut(s) | 197 |
| XceI | RCATGY | 1 cut(s) | 670 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 817, 2000, 3044 |
| XhoI | CTCGAG | 1 cut(s) | 696 |
| XmiI | GTMKAC | 3 cut(s) | 551, 886, 2797 |
| XmnI | GAANNNNTTC | 8 cut(s) | 105, 589, 801, 1071, 1503, 1597, 2954, 2991 |
| XspI | CTAG | 2 cut(s) | 198, 782 |
| Zsp2I | ATGCAT | 3 cut(s) | 281, 1473, 2851 |